CSPI02G08490 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G08490
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionBnaA07g27370D protein
LocationChr2 : 8032655 .. 8033991 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCCTTCCAACATTCGTTCAATAAATGACTCATGCCATTTCCTTCTCTTATTTCCCATCTCCAACCATGGCTTCCAAATCATGGTCATTTTTTGTCATCTGCCTTGCCTTTCTATTCTCTTCCGCGTTCGCTCAGGCCCCAGCACAGCCACCGAGCTTGCCAACCGTCTCTCCTCCCCCTACTACCCCACCTCCAACTGTAGCGACTTCTCCACCATTGTCAACACCACCACCTACTGTTGTTGCACCATCAACAAGTCCAACCATTCCACCACCACAAAGTTCACCTGTCTCCACCCCGTCGCTACCCCCTGCTTTGCCACCTCCACCCGCGACGCCTCCTCCATTGCCGCCTCCTTTACCACCACCGCAAGTCTCTCCGACTCCTTTGCCAACACCACCCGTACTAGCTCCCACCTTAGCACCATTACCATTACCGACTCCGCCAACACCAACACCTTCTCCACCAACCCCAGCACCTGTTGCGGCCCCAGAGCCATCCCCTGCACCCGCGCCGGGAAAGCATAAGCACAGGAGGCGTCACAAACATAAGAAGCATCAAGCACCAGCCCCGGCCCCTACCGTCCCAAGCCCACCGGCACCACCTACAGTGGTGGATTCACAAGATAGTACAGCCCCGGCACCATCACCAGATCTGGTAAAGCACGCCTTCATTATGTTTTTTTTTTTACATCTCTATGATTAAGGAGGTTACTTTTGATAAAAATTATTATATTGTAAAGTGAATTTCCATATCTGTAGCAAAAGAATTATTATATAATGTAAATAGGAAAATATAATTAATATATTGAAAAATTACGTAAATAGACAAAAAAAAAAAAAAAACAGCTAACTCTTAAATTTTATAAATGATAAATTCTAAGACACCCAATATAGTTCTATAAATGTTGGAATAGATTTGAAATTTATTATATTTAGGTATATTTTGCTAAATTATTATTATTATTATTATATATTTAAATTGGAAATTTGTGTTAATAGGATATTTTGTTTTATATACAGAATGGAGGAGACCCAATGAAAAGAAAGGTGGGAAGATGGAGTAAAGTTGGTTTGGGATTCATATTTCTAGTTGCTACCACTGGCTTCAATTTATAATTTTTTAAGAGAGAATTATTACCAAGGAATCCATCATGGTTCATAGTATTATAGAATTTGGCCCAGAATCTGAGAGATATATTTCATATATATCATTTTTTTAAAAAAATGGATTGTGTATTGGAATAATAATAATAATTTTTTATTTTATTTTATTTCATTTTTGTAATATAAACAATAATAATTTTCAAATGTGCTCCTGTTAGTCTCAATCCCAG

mRNA sequence

ATGACTCATGCCATTTCCTTCTCTTATTTCCCATCTCCAACCATGGCTTCCAAATCATGGTCATTTTTTGTCATCTGCCTTGCCTTTCTATTCTCTTCCGCGTTCGCTCAGGCCCCAGCACAGCCACCGAGCTTGCCAACCGTCTCTCCTCCCCCTACTACCCCACCTCCAACTGTAGCGACTTCTCCACCATTGTCAACACCACCACCTACTGTTGTTGCACCATCAACAAGTCCAACCATTCCACCACCACAAAGTTCACCTGTCTCCACCCCGTCGCTACCCCCTGCTTTGCCACCTCCACCCGCGACGCCTCCTCCATTGCCGCCTCCTTTACCACCACCGCAAGTCTCTCCGACTCCTTTGCCAACACCACCCGTACTAGCTCCCACCTTAGCACCATTACCATTACCGACTCCGCCAACACCAACACCTTCTCCACCAACCCCAGCACCTGTTGCGGCCCCAGAGCCATCCCCTGCACCCGCGCCGGGAAAGCATAAGCACAGGAGGCGTCACAAACATAAGAAGCATCAAGCACCAGCCCCGGCCCCTACCGTCCCAAGCCCACCGGCACCACCTACAGTGGTGGATTCACAAGATAGTACAGCCCCGGCACCATCACCAGATCTGAATGGAGGAGACCCAATGAAAAGAAAGGTGGGAAGATGGAGTAAAGTTGGTTTGGGATTCATATTTCTAGTTGCTACCACTGGCTTCAATTTATAA

Coding sequence (CDS)

ATGACTCATGCCATTTCCTTCTCTTATTTCCCATCTCCAACCATGGCTTCCAAATCATGGTCATTTTTTGTCATCTGCCTTGCCTTTCTATTCTCTTCCGCGTTCGCTCAGGCCCCAGCACAGCCACCGAGCTTGCCAACCGTCTCTCCTCCCCCTACTACCCCACCTCCAACTGTAGCGACTTCTCCACCATTGTCAACACCACCACCTACTGTTGTTGCACCATCAACAAGTCCAACCATTCCACCACCACAAAGTTCACCTGTCTCCACCCCGTCGCTACCCCCTGCTTTGCCACCTCCACCCGCGACGCCTCCTCCATTGCCGCCTCCTTTACCACCACCGCAAGTCTCTCCGACTCCTTTGCCAACACCACCCGTACTAGCTCCCACCTTAGCACCATTACCATTACCGACTCCGCCAACACCAACACCTTCTCCACCAACCCCAGCACCTGTTGCGGCCCCAGAGCCATCCCCTGCACCCGCGCCGGGAAAGCATAAGCACAGGAGGCGTCACAAACATAAGAAGCATCAAGCACCAGCCCCGGCCCCTACCGTCCCAAGCCCACCGGCACCACCTACAGTGGTGGATTCACAAGATAGTACAGCCCCGGCACCATCACCAGATCTGAATGGAGGAGACCCAATGAAAAGAAAGGTGGGAAGATGGAGTAAAGTTGGTTTGGGATTCATATTTCTAGTTGCTACCACTGGCTTCAATTTATAA
Homology
[Close]
BLAST of CSPI02G08490 vs. Swiss-Prot
Match: AGP19_ARATH (Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana GN=AGP19 PE=2 SV=2)

HSP 1 Score: 95.9 bits (237), Expect = 6.5e-19
Identity = 106/214 (49.53%), Postives = 129/214 (60.28%), Query Frame = 1 

Query: 40  AQPPSLPTVSPPP-TTPPPTVATSPPLS--TPPPTVVAPSTSPTIPP-PQSSPVSTPSLP 99
           A PP+  T +PPP TT PP  A  PP S  TPPP V     +PT PP P+ +PV +P+ P
Sbjct: 44  AAPPT--TAAPPPTTTTPPVSAAQPPASPVTPPPAV-----TPTSPPAPKVAPVISPATP 103

Query: 100 PALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAPTLAP----LPLPTPPTPTPSPPTPA 159
           P  P PP +PP   P + PP VSP P PT P   P   P     P P P +P P+P +P 
Sbjct: 104 P--PQPPQSPPASAPTVSPPPVSPPPAPTSPPPTPASPPPAPASPPPAPASPPPAPVSPP 163

Query: 160 PVAAPEP---SPAPAPGKHKHRRRHKHKK-HQAPAPAPTVPSPPAPPTVVDSQDSTAPAP 219
           PV AP P    PAPAP   KH+R+HKHK+ H APAPAP  PSPP+PP + D QD TAPAP
Sbjct: 164 PVQAPSPISLPPAPAPAPTKHKRKHKHKRHHHAPAPAPIPPSPPSPPVLTDPQD-TAPAP 223

Query: 220 SPDLNGGDPMKRKVGR---WSKVGLGFIFLVATT 239
           SP+ NGG+ + +  GR   W   GL  +FL+A T
Sbjct: 224 SPNTNGGNALNQLKGRAVMWLNTGLVILFLLAMT 247

[Close]
BLAST of CSPI02G08490 vs. TrEMBL
Match: A0A0A0LHJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G115750 PE=4 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 1.1e-113
Identity = 240/242 (99.17%), Postives = 242/242 (100.00%), Query Frame = 1 

Query: 1   MTHAISFSYFPSPTMASKSWSFFVICLAFLFSSAFAQAPAQPPSLPTVSPPPTTPPPTVA 60
           MTHAISFSYFPSPTMASKSWSFFVICLAFLFSS+FAQAPAQPPSLPTVSPPPTTPPPTVA
Sbjct: 1   MTHAISFSYFPSPTMASKSWSFFVICLAFLFSSSFAQAPAQPPSLPTVSPPPTTPPPTVA 60

Query: 61  TSPPLSTPPPTVVAPSTSPTIPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPT 120
           TSPPLSTPPPTVVAPSTSPTIPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPT
Sbjct: 61  TSPPLSTPPPTVVAPSTSPTIPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPT 120

Query: 121 PLPTPPVLAPTLAPLPLPTPPTPTPSPPTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQA 180
           PLPTPPVLAPTLAPLPLPTPPTPTPSPPTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQA
Sbjct: 121 PLPTPPVLAPTLAPLPLPTPPTPTPSPPTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQA 180

Query: 181 PAPAPTVPSPPAPPTVVDSQDSTAPAPSPDLNGGDPMKRKVGRWSKVGLGFIFLVATTGF 240
           PAPAPTVPSPPAPPTVVDSQDSTAPAPSPDLNGGDP+KRKVGRWSKVGLGFIFLVATTGF
Sbjct: 181 PAPAPTVPSPPAPPTVVDSQDSTAPAPSPDLNGGDPVKRKVGRWSKVGLGFIFLVATTGF 240

Query: 241 NL 243
           NL
Sbjct: 241 NL 242

[Close]
BLAST of CSPI02G08490 vs. TrEMBL
Match: A0A067FVG5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023867mg PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.4e-36
Identity = 142/280 (50.71%), Postives = 169/280 (60.36%), Query Frame = 1 

Query: 15  MASKSWSFFVICLAFLFSSAFAQAPAQPPS-LPTVSPPPTT---------PPPTVATSPP 74
           M S  W+  ++C  F  +   AQ PA  PS LPT +PPPTT         PPPT    PP
Sbjct: 1   MDSIFWALILVCSIFPIAITNAQTPAASPSNLPTTTPPPTTAAAPPPTTTPPPTTTAPPP 60

Query: 75  LSTPPPTV--------------------------VAPSTSPTIPPPQ---SSPVSTPSLP 134
            +TPPP+                           VAP+TSP++PPPQ   S P+STPS P
Sbjct: 61  TTTPPPSTTPTAPTQPPVSAATPPPATTPASSPKVAPATSPSVPPPQPPQSPPISTPSQP 120

Query: 135 PALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAP-----TLAPLPLPTPPTPTPSP--- 194
           PALPPPPATPPP    LPPPQVSPTP   PP  AP     T AP P+  PPTP P+P   
Sbjct: 121 PALPPPPATPPPA---LPPPQVSPTPAQAPPAPAPAKAPPTPAPAPVKAPPTPAPAPVKA 180

Query: 195 ---PTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQ-APAPAPTVPSPPAPPTVVDSQDST 240
              P PAPV+ P P+PAPAP KHK +R+HKHK+H  APAPAPTVPSPPAPPTV DS+D+T
Sbjct: 181 PPTPAPAPVSLP-PAPAPAPPKHKKKRKHKHKRHHHAPAPAPTVPSPPAPPTVPDSEDTT 240

[Close]
BLAST of CSPI02G08490 vs. TrEMBL
Match: A0A061ECT3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_011899 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.4e-25
Identity = 121/265 (45.66%), Postives = 149/265 (56.23%), Query Frame = 1 

Query: 15  MASKSWSFFVICLAFLFSSAFAQAPAQPPSL-------PTVSPPP--TTPPPTVAT---- 74
           MA  SW+  + CL+F  +   AQ PA  PS        P+ SPPP   TPPP+ AT    
Sbjct: 1   MAPMSWALILTCLSFQLAITNAQGPAASPSTTPTTITPPSTSPPPPTATPPPSTATPPPT 60

Query: 75  -------------SPPLSTPPPTV-----VAPSTSPTIPPPQSSPVSTPSLPPALPP--P 134
                         PP +TPPP       VAP+TSPT+PPPQ  P   P  PP   P  P
Sbjct: 61  TTPPPSTTPTAPAQPPATTPPPVTTPAPKVAPATSPTVPPPQIPPPQPPQTPPTTAPVQP 120

Query: 135 PATPPPLPPPLPPPQVSPTPLPTPPVLAPTLAPLPLPTPPTPTPS--PPTPAPVAAPEPS 194
           PA PPP   P  PP+VSP P   PP      AP P    P P P+  PP  AP+  P P+
Sbjct: 121 PAVPPP---PASPPRVSPAPAQAPP------APAPAKEAPVPAPAKLPPALAPIILP-PA 180

Query: 195 PAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPPAPPTVVDSQDST-APAPSPDLNGGDPMK 242
           PAPAP KH+ R RH+H++H APAPAPTVPSPPAPPTV  + D+T AP+PS +LNGGD + 
Sbjct: 181 PAPAPSKHRRRHRHRHRRHHAPAPAPTVPSPPAPPTVPTTDDTTPAPSPSLNLNGGDSLF 240

[Close]
BLAST of CSPI02G08490 vs. TrEMBL
Match: A9PG83_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s14250g PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 9.4e-25
Identity = 118/246 (47.97%), Postives = 144/246 (58.54%), Query Frame = 1 

Query: 15  MASKSWSFFVICLAFLFSSAFAQAPAQPPSLPTVS-PPPTTPPPTVATSPPLSTPPPTVV 74
           MAS  W+  + CL+F  +   AQ PA  PS PT + PPPTT P T   SP  +  PPT  
Sbjct: 1   MASVLWALILACLSFPLAITDAQTPAVSPSTPTTTTPPPTTTPTTPTQSPASAVTPPTAT 60

Query: 75  APSTSPTIPPPQSSPVSTPSLPPALPP---PPATPPPLPPPLPPPQVSPTPLPTPPVLAP 134
            P +SP+   P+ +P +TP +PP  PP   P ATP P PP  PPPQVSP P P  P  AP
Sbjct: 61  TPISSPS---PKVAPATTPVVPPPQPPQSSPAATPIP-PPATPPPQVSPAPAPATPPPAP 120

Query: 135 TLA-----PLPLPTPPTPTPSPPTPAPVAAPE--PSPAPAPGKHKHRRRHKHK-KHQAPA 194
             A     P P   PP P P+P  P P  +P   PSPAPAPGKHK +R+HKHK  H APA
Sbjct: 121 APAKEVPAPAPATPPPAPVPAPAIPPPAPSPSLVPSPAPAPGKHKMKRKHKHKHHHHAPA 180

Query: 195 PAPTVPSPPAPPTVVDSQDSTAPAPSPDLNGGDPMKRKVGR-------WSKVGLGFIFLV 242
           PAP  PSPPAPPTV  + + TAPAPSP  NGG+ +  + GR       W++  L F  L+
Sbjct: 181 PAPNPPSPPAPPTVTTASEDTAPAPSP--NGGNTLYHQEGRARMWARMWARTVLAFASLL 240

[Close]
BLAST of CSPI02G08490 vs. TrEMBL
Match: A0A0S3T0Z7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G026400 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 9.4e-25
Identity = 127/275 (46.18%), Postives = 151/275 (54.91%), Query Frame = 1 

Query: 14  TMASKSWSFFVICLAFLFSSAFAQAPAQ------PPSLP------TVSPPPTTPPPTVAT 73
           TMA   WS  ++CL F   S  AQAPA       PP+ P      + +PP  T PPTV  
Sbjct: 43  TMAVVFWSLVLVCLCFQLPSN-AQAPATVPPVQLPPTTPAATSPSSTTPPVATQPPTVVA 102

Query: 74  SPPLSTPPPTV----------------VAPSTSPTIPPPQS-------SPVSTPSLPPAL 133
           SPP +T PPT                 +AP++SP  PPPQ+       SPV  P+ PP L
Sbjct: 103 SPPTTTTPPTTSPPPTSVAPVTPPSPKIAPASSPKAPPPQTPPQPPKPSPVPPPTSPPPL 162

Query: 134 PPPPATPPPLPPPLPPPQVSPTPLPTPPVLAP---TLAPLPLPTPPTPTPSPPTPAPVAA 193
           PPPP   PP   PLPPP+++PTP  TPP  AP   T AP P P  P PTPSP  P P  A
Sbjct: 163 PPPPVATPP---PLPPPKIAPTPAITPPTPAPVKATPAPAPAPAKPAPTPSPVPPPPTLA 222

Query: 194 PEP---SPAPAPGKHKHRR-RHKHKKHQAPAPAPTV--PSPPAPPTVVDSQDSTAPAPSP 242
           P P    PAPAP  HKHRR RH+H++HQAPAPAPT+   SPPAPP      D+T PAPSP
Sbjct: 223 PTPVVEVPAPAPSSHKHRRHRHRHRRHQAPAPAPTIIRKSPPAPPDSTAESDTT-PAPSP 282

[Close]
BLAST of CSPI02G08490 vs. TAIR10
Match: AT1G68725.1 (AT1G68725.1 arabinogalactan protein 19)

HSP 1 Score: 95.9 bits (237), Expect = 3.6e-20
Identity = 106/214 (49.53%), Postives = 129/214 (60.28%), Query Frame = 1 

Query: 40  AQPPSLPTVSPPP-TTPPPTVATSPPLS--TPPPTVVAPSTSPTIPP-PQSSPVSTPSLP 99
           A PP+  T +PPP TT PP  A  PP S  TPPP V     +PT PP P+ +PV +P+ P
Sbjct: 44  AAPPT--TAAPPPTTTTPPVSAAQPPASPVTPPPAV-----TPTSPPAPKVAPVISPATP 103

Query: 100 PALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAPTLAP----LPLPTPPTPTPSPPTPA 159
           P  P PP +PP   P + PP VSP P PT P   P   P     P P P +P P+P +P 
Sbjct: 104 P--PQPPQSPPASAPTVSPPPVSPPPAPTSPPPTPASPPPAPASPPPAPASPPPAPVSPP 163

Query: 160 PVAAPEP---SPAPAPGKHKHRRRHKHKK-HQAPAPAPTVPSPPAPPTVVDSQDSTAPAP 219
           PV AP P    PAPAP   KH+R+HKHK+ H APAPAP  PSPP+PP + D QD TAPAP
Sbjct: 164 PVQAPSPISLPPAPAPAPTKHKRKHKHKRHHHAPAPAPIPPSPPSPPVLTDPQD-TAPAP 223

Query: 220 SPDLNGGDPMKRKVGR---WSKVGLGFIFLVATT 239
           SP+ NGG+ + +  GR   W   GL  +FL+A T
Sbjct: 224 SPNTNGGNALNQLKGRAVMWLNTGLVILFLLAMT 247

[Close]
BLAST of CSPI02G08490 vs. NCBI nr
Match: gi|700206281|gb|KGN61400.1| (hypothetical protein Csa_2G115750 [Cucumis sativus])

HSP 1 Score: 417.5 bits (1072), Expect = 1.6e-113
Identity = 240/242 (99.17%), Postives = 242/242 (100.00%), Query Frame = 1 

Query: 1   MTHAISFSYFPSPTMASKSWSFFVICLAFLFSSAFAQAPAQPPSLPTVSPPPTTPPPTVA 60
           MTHAISFSYFPSPTMASKSWSFFVICLAFLFSS+FAQAPAQPPSLPTVSPPPTTPPPTVA
Sbjct: 1   MTHAISFSYFPSPTMASKSWSFFVICLAFLFSSSFAQAPAQPPSLPTVSPPPTTPPPTVA 60

Query: 61  TSPPLSTPPPTVVAPSTSPTIPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPT 120
           TSPPLSTPPPTVVAPSTSPTIPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPT
Sbjct: 61  TSPPLSTPPPTVVAPSTSPTIPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPT 120

Query: 121 PLPTPPVLAPTLAPLPLPTPPTPTPSPPTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQA 180
           PLPTPPVLAPTLAPLPLPTPPTPTPSPPTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQA
Sbjct: 121 PLPTPPVLAPTLAPLPLPTPPTPTPSPPTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQA 180

Query: 181 PAPAPTVPSPPAPPTVVDSQDSTAPAPSPDLNGGDPMKRKVGRWSKVGLGFIFLVATTGF 240
           PAPAPTVPSPPAPPTVVDSQDSTAPAPSPDLNGGDP+KRKVGRWSKVGLGFIFLVATTGF
Sbjct: 181 PAPAPTVPSPPAPPTVVDSQDSTAPAPSPDLNGGDPVKRKVGRWSKVGLGFIFLVATTGF 240

Query: 241 NL 243
           NL
Sbjct: 241 NL 242

[Close]
BLAST of CSPI02G08490 vs. NCBI nr
Match: gi|778668213|ref|XP_011649058.1| (PREDICTED: lysine-rich arabinogalactan protein 19-like [Cucumis sativus])

HSP 1 Score: 389.0 bits (998), Expect = 5.9e-105
Identity = 226/228 (99.12%), Postives = 228/228 (100.00%), Query Frame = 1 

Query: 15  MASKSWSFFVICLAFLFSSAFAQAPAQPPSLPTVSPPPTTPPPTVATSPPLSTPPPTVVA 74
           MASKSWSFFVICLAFLFSS+FAQAPAQPPSLPTVSPPPTTPPPTVATSPPLSTPPPTVVA
Sbjct: 1   MASKSWSFFVICLAFLFSSSFAQAPAQPPSLPTVSPPPTTPPPTVATSPPLSTPPPTVVA 60

Query: 75  PSTSPTIPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAPTLAP 134
           PSTSPTIPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAPTLAP
Sbjct: 61  PSTSPTIPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAPTLAP 120

Query: 135 LPLPTPPTPTPSPPTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPPAPP 194
           LPLPTPPTPTPSPPTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPPAPP
Sbjct: 121 LPLPTPPTPTPSPPTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPPAPP 180

Query: 195 TVVDSQDSTAPAPSPDLNGGDPMKRKVGRWSKVGLGFIFLVATTGFNL 243
           TVVDSQDSTAPAPSPDLNGGDP+KRKVGRWSKVGLGFIFLVATTGFNL
Sbjct: 181 TVVDSQDSTAPAPSPDLNGGDPVKRKVGRWSKVGLGFIFLVATTGFNL 228

[Close]
BLAST of CSPI02G08490 vs. NCBI nr
Match: gi|659114696|ref|XP_008457186.1| (PREDICTED: lysine-rich arabinogalactan protein 19 [Cucumis melo])

HSP 1 Score: 380.6 bits (976), Expect = 2.1e-102
Identity = 224/242 (92.56%), Postives = 228/242 (94.21%), Query Frame = 1 

Query: 1   MTHAISFSYFPSPTMASKSWSFFVICLAFLFSSAFAQAPAQPPSLPTVSPPPTTPPPTVA 60
           MTH ISFSYFPSPTMASK WSF VICLAFLFSSA AQAPAQPPSLPTVSPPP+TPPPTV 
Sbjct: 1   MTHTISFSYFPSPTMASKLWSFSVICLAFLFSSAIAQAPAQPPSLPTVSPPPSTPPPTVP 60

Query: 61  TSPPLSTPPPTVVAPSTSPTIPPPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPT 120
           T PPLSTPPPTVVAPSTSP IPPPQSSPVSTPSLPPA PPPPATPPPLPPPLPPPQVSP 
Sbjct: 61  TPPPLSTPPPTVVAPSTSPAIPPPQSSPVSTPSLPPAFPPPPATPPPLPPPLPPPQVSPI 120

Query: 121 PLPTPPVLAPTLAPLPLPTPPTPTPSPPTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQA 180
           PLPTPPVLAPTLAPLPLPT PTPTPSPPTPAPVA+PE SPAPAPGKHKHRRRHKHKKHQA
Sbjct: 121 PLPTPPVLAPTLAPLPLPTSPTPTPSPPTPAPVASPELSPAPAPGKHKHRRRHKHKKHQA 180

Query: 181 PAPAPTVPSPPAPPTVVDSQDSTAPAPSPDLNGGDPMKRKVGRWSKVGLGFIFLVATTGF 240
           PAPAPTVPSPPAPPTVVDSQDSTAPAPSPDL+ GDPMK KVG W+KVGLGFIFLVATTGF
Sbjct: 181 PAPAPTVPSPPAPPTVVDSQDSTAPAPSPDLSRGDPMKGKVGTWTKVGLGFIFLVATTGF 240

Query: 241 NL 243
           NL
Sbjct: 241 NL 242

[Close]
BLAST of CSPI02G08490 vs. NCBI nr
Match: gi|641851274|gb|KDO70145.1| (hypothetical protein CISIN_1g023867mg [Citrus sinensis])

HSP 1 Score: 161.4 bits (407), Expect = 2.0e-36
Identity = 142/280 (50.71%), Postives = 169/280 (60.36%), Query Frame = 1 

Query: 15  MASKSWSFFVICLAFLFSSAFAQAPAQPPS-LPTVSPPPTT---------PPPTVATSPP 74
           M S  W+  ++C  F  +   AQ PA  PS LPT +PPPTT         PPPT    PP
Sbjct: 1   MDSIFWALILVCSIFPIAITNAQTPAASPSNLPTTTPPPTTAAAPPPTTTPPPTTTAPPP 60

Query: 75  LSTPPPTV--------------------------VAPSTSPTIPPPQ---SSPVSTPSLP 134
            +TPPP+                           VAP+TSP++PPPQ   S P+STPS P
Sbjct: 61  TTTPPPSTTPTAPTQPPVSAATPPPATTPASSPKVAPATSPSVPPPQPPQSPPISTPSQP 120

Query: 135 PALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAP-----TLAPLPLPTPPTPTPSP--- 194
           PALPPPPATPPP    LPPPQVSPTP   PP  AP     T AP P+  PPTP P+P   
Sbjct: 121 PALPPPPATPPPA---LPPPQVSPTPAQAPPAPAPAKAPPTPAPAPVKAPPTPAPAPVKA 180

Query: 195 ---PTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQ-APAPAPTVPSPPAPPTVVDSQDST 240
              P PAPV+ P P+PAPAP KHK +R+HKHK+H  APAPAPTVPSPPAPPTV DS+D+T
Sbjct: 181 PPTPAPAPVSLP-PAPAPAPPKHKKKRKHKHKRHHHAPAPAPTVPSPPAPPTVPDSEDTT 240

[Close]
BLAST of CSPI02G08490 vs. NCBI nr
Match: gi|568861793|ref|XP_006484384.1| (PREDICTED: lysine-rich arabinogalactan protein 19 [Citrus sinensis])

HSP 1 Score: 159.1 bits (401), Expect = 1.0e-35
Identity = 141/287 (49.13%), Postives = 169/287 (58.89%), Query Frame = 1 

Query: 15  MASKSWSFFVICLAFLFSSAFAQAPAQPPS-LPTVSPPPTT----------------PPP 74
           M S  W+  ++C  F  +   AQ PA  PS LPT +PPPTT                PPP
Sbjct: 1   MDSIFWALILVCSIFPIAITNAQTPAASPSNLPTTTPPPTTAAAPPPTTTAPPPTTTPPP 60

Query: 75  TVATSPPLSTPPPTV--------------------------VAPSTSPTIPPPQ---SSP 134
           T    PP++TPPP+                           VAP+TSP++PPPQ   S P
Sbjct: 61  TTTAPPPMTTPPPSTTPTAPTQPPVSAATPPPATTPVSSPKVAPATSPSVPPPQPPQSPP 120

Query: 135 VSTPSLPPALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAP-----TLAPLPLPTPPTP 194
           +STPS PPALPPPPATPPP    LPPPQVSPTP   PP  AP     T AP P+  PPTP
Sbjct: 121 ISTPSQPPALPPPPATPPPA---LPPPQVSPTPAQAPPAPAPAKAPPTPAPAPVKAPPTP 180

Query: 195 TPSP------PTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQ-APAPAPTVPSPPAPPTV 240
            P+P      P PAP+  P P+PAPAP KHK +R+HKHK+H  APAPAPTVPSPPAPPTV
Sbjct: 181 APAPVKAPPTPAPAPITLP-PAPAPAPPKHKKKRKHKHKRHHHAPAPAPTVPSPPAPPTV 240

The following BLAST results are available for this feature:
BLAST of CSPI02G08490 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AGP19_ARATH6.5e-1949.53Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana GN=AGP19 PE=2 SV=... [more]
BLAST of CSPI02G08490 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LHJ4_CUCSA1.1e-11399.17Uncharacterized protein OS=Cucumis sativus GN=Csa_2G115750 PE=4 SV=1[more]
A0A067FVG5_CITSI1.4e-3650.71Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023867mg PE=4 SV=1[more]
A0A061ECT3_THECC1.4e-2545.66Uncharacterized protein OS=Theobroma cacao GN=TCM_011899 PE=4 SV=1[more]
A9PG83_POPTR9.4e-2547.97Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s14250g PE=2 SV=1[more]
A0A0S3T0Z7_PHAAN9.4e-2546.18Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G026400 PE=... [more]
BLAST of CSPI02G08490 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G68725.13.6e-2049.53 arabinogalactan protein 19[more]
BLAST of CSPI02G08490 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206281|gb|KGN61400.1|1.6e-11399.17hypothetical protein Csa_2G115750 [Cucumis sativus][more]
gi|778668213|ref|XP_011649058.1|5.9e-10599.12PREDICTED: lysine-rich arabinogalactan protein 19-like [Cucumis sativus][more]
gi|659114696|ref|XP_008457186.1|2.1e-10292.56PREDICTED: lysine-rich arabinogalactan protein 19 [Cucumis melo][more]
gi|641851274|gb|KDO70145.1|2.0e-3650.71hypothetical protein CISIN_1g023867mg [Citrus sinensis][more]
gi|568861793|ref|XP_006484384.1|1.0e-3549.13PREDICTED: lysine-rich arabinogalactan protein 19 [Citrus sinensis][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G08490.1CSPI02G08490.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI02G08490Csa2G115750Cucumber (Chinese Long) v2cpicuB065
CSPI02G08490ClCG06G008280Watermelon (Charleston Gray)cpiwcgB157
CSPI02G08490Lsi09G010840Bottle gourd (USVL1VR-Ls)cpilsiB086
CSPI02G08490CsaV3_2G010870Cucumber (Chinese Long) v3cpicucB080
CSPI02G08490Bhi12G001227Wax gourdcpiwgoB123
CSPI02G08490Cucsa.265780Cucumber (Gy14) v1cgycpiB403
CSPI02G08490CsGy2G008780Cucumber (Gy14) v2cgybcpiB056
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None