Lsi09G016300 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGGATCTGCAATTTTTTAAGAGTGATTTTGTTAATTTTGTTACTGATTTTAAAGAAAGAGAAGTTATTTTTTTGTCCCAACTTATTTCTCCGACATTTCAGGTACTTTCTGAAACTTGAAATCGCTTCTCTTAGAAACAAGTGCCTAAAAAAAACAAAGATTATATATAAGAAGGAAAAAAAATGCTGGATTATGAATGGGGATCAACAAACCCGCCGCCGATCATCATCTCCGGCGAAGAATCCGAACCTGTTTTCAACTCCGACCCAACTAACTCTCACAACTTTCCCACTTTTGTAGACCACCATCACAACACATTCCTTCCTCCGCCGCCGCCGCCGCCGACTACGGCGGCGTTCAGCTCTCACTACGGTGGGTTCTACGACCACCCGCAGAGCTACACTATGGTTCCTTCTTCTCATCATTATGATAGTGTGGCGGGCGGGGGAGGGGAGTTTGTGGTGGTGCCGAAGAGTGAGGATGTTTGTGGGAGTATGGCGGCGGCAGCGCCGGTGGAATTTGCGGCGAGGATTGGGCTGAATTTAGGGGGAAGGACGTATTTCTCGTCGGAGGAGGAGGAGTTTGTGAACCGGCTGTACCGGAGGACGAGAACCGGCGGCGAAATGGGCGGTTCGGGGAATTGGGCGGTTCGGTGTCAAGCGGAGGGGTGTAATGCGGATCTGAGTCAAGCGAAGCACTACCACCGACGCCATAAGGTTTGTGAGTTTCATTCTAAAGCTTCCACTGTCATCACCGCCGGGTTGACTCAGAGGTTCTGTCAACAATGCAGCAGGTTCGTTCCTCTCTCTCTCTTCTTCTGAAATTCCTAAATTACCCCTCGTCGTTGTCGTCCTTCTTGATCTCGTTCTGAATTATTATTTAATGTGATTGTCACAACGTGGGGTAAAGAAATATTAAATTTTACTGTTACAGTTTATGAATTTATCATTCTTGTAATTGTTTGATGTATGTTCGCAATAGATTACATTTTTGTAGAATTTAAATACATTTGTAGATATTATTGGATAGGAAACTCAACTCGTGTCATTTTTTTAAAAGGGACGGAGGATTCAAATCATAGACCTCATGGCCACTGATACATCTCGAATATAAGTTGAGTTTATGCTCACTTTAATAAACTCATATCATTTTAGAGGAGCTAAGATGTTGTAATTATTCACATTGTTCTCTGAAATTTGTTTAGCTTATAATCTAGAAACAAAAATTCATCACCACAAGGTTTGAATTTTTGTTATTTTTATTTACGGTTTAAATCACATGTTTAAAGAATATTAGTTCTATAAATTAGCTAAAATTTATAGGTAACTAATATATCAACAGTAACACATATATATAATCAAGACAGTATTTTAAAAATGAATTATCGAATGAAAATATATTGAATAAGAGTAAGGAGATTTGAACTTTCAATAAATAATACATTTCAATTATTGTTGAATTACATCATAATTACTAATATACTTGTATGCCAATTGAACTATACTCACTTTAACTACCATTGAATTATAATTACTTTAACAACTTATTCAATTTTAACATAGCTAACCGATGAAGACAAGAATATAAATTTATAAATTTTTATAGGACCTAGGTTTTCAATTATTTAAGGATTTCACCCACTAGTGAGTAAAATTGAATGTTTTTGCTTCCACACACAGTATCGTGTTTGGAGGGGACATCCTCAACATATGTGTAAATGACGTAAATACCCTCCATTGTGGTCAATGATTTGGTTAGCCGTATTCGTGGAGTAAATCCCGAGGGTAATTCCGTCCGTTGAAAAAGGTCCCTGTAGTTTCAGGTTTGACGGTGGGTCTACATGGCCCCCCCCCCCCTTACAAAAGCCCTAGAGCAGCTTTCCTTAGTTGGCTGCAAATCTGACTGAAATACCCAAAATACCCCCACTCCCTTTTTTTTTATCAAGAAGACAATGATTGCCCTTCCGTACAAAAAGAAAATCCCGAGGGCATTTGCGTCCGTAAATGTCCAGAACCCTTTGGGGAGAGTCGTTCATTGCACTTGGCAATTTCGTACCCCTTTGTTCCACCTTTGTTTGGGCAGACGCTTCTTTCATTTATTAACCCTTTCCCTTTTTTTTCTTTTTTTGGGTAAAATAGTAATAGTAAGATTCCCACTACAAACTTTATCGTTATTAATACATTTGTATATTAATTGAGTTATACTTGATTTGACTTTATTAACCCTTCCTAAAATGTGACAAAATTACCCTTTCCCATTTTCTAAATATAACACGAATGATATTTCAGCATATCCCAAGATGCATCTCACTCTCATTCTTCACACAAAAAAGAATTAAAATGTTTAAAGAAAGATGTAAGAAGAATTTTCCATGTAGTAAATTATGATTAGACAAATGGATGAGATGTACAAAAAGGGGTGTCCGTAGGTTGGGTTGAACCACTTTTTAGACCCAATCCAATTGTTCAGGTTGTAAGTTTCTTTTTTAATAATGAAAACTCAACCCAACCCAACTACATGAAACATTTGAGTTGAGTTGGTTCGGGTTACTCGAGTCATTTATTTAAATATTTTCATATATTGAACTAAGATTAACCATTTCAATTTCAATTTCAATTTATATTATGATCATTTTCTTTCCAAAGTGTTAAAAAATTATTTTTAGGAGTTGCTGGAGAATTAATGATTAAAAAATGATGAAATTAAATAAAATTAAAAGAAATAGATGTTTATATAATTGTATCCTAAGTAAAAAATATATACACTTTTTAAAATTAATAATAAGTTTAGGTTGGTTCGGATTGCTTTTTGTTATTTTAGGTGAACTCATAGCTATGTTTCGATTTATATTTGTTATAATAATAATGTTTTATGAAAAATACTTAGGTGCATCACAAGCTATACATGAGTGTTCAAAAAACTCGATGACCCGAAAAACATGATCAATTCAACTCATCCCATTCCAACCCGTATGGTTTAAAGTTGAGTTGAGTTGAGTTCAAATATATGAAAATTTTATGGATTGATGAATTGGTTTAAATTCATAAAAGAAGTAAATATTATTTGGTTGGATACATAAGAAAAGTTATTCTCAATAAGTTTGAGTTATATATATTTACGTTACATTTATAATATTAATGGAAAAAAGGGTTTTAGGGGTTTTATTTTTTGACCAAGTATTTTTTGTTTGTAGGTTTCATGTACTAGCAGAGTTTGATAATGGAAAACGAAGTTGTCGCAAAAGATTGGCAGATCACAACCGTCGACGAAGAAAGTCTCAACAATCCCATCAAGGAAGCCCCAACTCATCTCGACCACTTGAAACTACTACTTCTTCAACTGATTCTACTGCTGCGAGTAAGTCACTTCACTTATTATTTAAATATTTTTATATTCTTTTTTATTTTACATAAGTATTTTAAAATATTATTTCAATTTGTTATACTTTTTATAAACGTGGTGATCATAAATCTATAGCATTGCAAAATTCCCTTTGCATAGATCTAGGTTAATATCTGTCGTACTCTCACTTATTGTATTAAAAAAATCTCTTATTCGTTATAAGGTGGTGAGAAATTTCAAAATTAGGTTATTTATATCTTAACTAGACAATATATATACTAGGGCTCATGTTCAATTATAGGATTAGTTAATCTTTTTATAGTATGTGTGTAACGCTCAAGTTTAGGAGGGGTACATAAATAAACTGAGATCACATCTGGATGAGAGAGATCTTGAAAATATAAAAGCATGGTTAAGAAAGACTTAAAAAAATTGATAGTTACTACCTATACGTCCTTTTCTGTGGTTCAATCATAGGAACTCCAAAGTTAAATATGCTTTATATGTTATTGAAAACAAAAATATGTTGTCAAGACCCATGTTGGGTTTGTAGGGATAACCTTCACTCTTAGAAGCTGCTTAAAATAAGCAAGAATGACGTTGACATGTCACAGGAAATGTAAAAGGGAATGTCATGGTCATCAGGTGCTGAAACCAGAATCTTAATCCTAATATGAATCTTAGATTTAGAGCATTACAATATCTAGAGTGGTGATTCAAACTTAGCTTCTTACATTTTTAGTTTTAGTTGATGATATAATGTTTTGTTTCAATCGCATATTAGACACACATCTAAGATAGTCTGGATTGAGCCTCCACCATAAACAAGAGTTTAATATATAAAGATTAAAACATAATCCCAATACTTTTTTTTCATAAATATAAAACATAGCTAGTTAGAGTCATACAGTTTTTGAATGGTTCAACGCATCAATAATAATAAAAACATCAAAACGAAATTAGCATAATAATTTGAGAGTCTAGATGTATACTGGACTGCTCTATCTTTGTACAACTTACCCAAGTGTTCAATCATAAGTTACACGTAAATTTTTTTTTCAAAAGAAATTTTTTCTAACACATATTTTTAATTGAAAAGGATGCATAGAAATCGATTAATCTATAATTTGAATCTAATTTTAATTAATGCAATTGAGTTTGGTAGGGTCCGGAATGGAGGCAACAGGACAGTCAGCGTGGTCGGTAACAGTGGCAGTGTCTCCGGCGAGAATGTCATTGGACTGCCTTAACCAAAGGCCATATTGACAAAATTGTAGACGGCCATTAAATATATTACATATTCTTCTCAAATGACTGTGACAAGAACACGTGGCAAAAGAAGAGAATTTAATTAGGAAATAACATAGAGAAGAATATGATATATGATTTATATGTGTATTATTGTGTGTAGGTAGCTGTTCTTAATTAATTTAACCTTCTATATTTTAGTTTTAACTCTACAGTTTCATTTTCTCAGATGTGTGTAATATCATGAATTAGATTTAATTTAGTGGTAGTGTAGTGTAGTTTTTTTT GGGGATCTGCAATTTTTTAAGAGTGATTTTGTTAATTTTGTTACTGATTTTAAAGAAAGAGAAGTTATTTTTTTGTCCCAACTTATTTCTCCGACATTTCAGGTACTTTCTGAAACTTGAAATCGCTTCTCTTAGAAACAAGTGCCTAAAAAAAACAAAGATTATATATAAGAAGGAAAAAAAATGCTGGATTATGAATGGGGATCAACAAACCCGCCGCCGATCATCATCTCCGGCGAAGAATCCGAACCTGTTTTCAACTCCGACCCAACTAACTCTCACAACTTTCCCACTTTTGTAGACCACCATCACAACACATTCCTTCCTCCGCCGCCGCCGCCGCCGACTACGGCGGCGTTCAGCTCTCACTACGGTGGGTTCTACGACCACCCGCAGAGCTACACTATGGTTCCTTCTTCTCATCATTATGATAGTGTGGCGGGCGGGGGAGGGGAGTTTGTGGTGGTGCCGAAGAGTGAGGATGTTTGTGGGAGTATGGCGGCGGCAGCGCCGGTGGAATTTGCGGCGAGGATTGGGCTGAATTTAGGGGGAAGGACGTATTTCTCGTCGGAGGAGGAGGAGTTTGTGAACCGGCTGTACCGGAGGACGAGAACCGGCGGCGAAATGGGCGGTTCGGGGAATTGGGCGGTTCGGTGTCAAGCGGAGGGGTGTAATGCGGATCTGAGTCAAGCGAAGCACTACCACCGACGCCATAAGGTTTGTGAGTTTCATTCTAAAGCTTCCACTGTCATCACCGCCGGGTTGACTCAGAGGTTCTGTCAACAATGCAGCAGGTTTCATGTACTAGCAGAGTTTGATAATGGAAAACGAAGTTGTCGCAAAAGATTGGCAGATCACAACCGTCGACGAAGAAAGTCTCAACAATCCCATCAAGGAAGCCCCAACTCATCTCGACCACTTGAAACTACTACTTCTTCAACTGATTCTACTGCTGCGAGGTCCGGAATGGAGGCAACAGGACAGTCAGCGTGGTCGGTAACAGTGGCAGTGTCTCCGGCGAGAATGTCATTGGACTGCCTTAACCAAAGGCCATATTGACAAAATTGTAGACGGCCATTAAATATATTACATATTCTTCTCAAATGACTGTGACAAGAACACGTGGCAAAAGAAGAGAATTTAATTAGGAAATAACATAGAGAAGAATATGATATATGATTTATATGTGTATTATTGTGTGTAGGTAGCTGTTCTTAATTAATTTAACCTTCTATATTTTAGTTTTAACTCTACAGTTTCATTTTCTCAGATGTGTGTAATATCATGAATTAGATTTAATTTAGTGGTAGTGTAGTGTAGTTTTTTTT ATGCTGGATTATGAATGGGGATCAACAAACCCGCCGCCGATCATCATCTCCGGCGAAGAATCCGAACCTGTTTTCAACTCCGACCCAACTAACTCTCACAACTTTCCCACTTTTGTAGACCACCATCACAACACATTCCTTCCTCCGCCGCCGCCGCCGCCGACTACGGCGGCGTTCAGCTCTCACTACGGTGGGTTCTACGACCACCCGCAGAGCTACACTATGGTTCCTTCTTCTCATCATTATGATAGTGTGGCGGGCGGGGGAGGGGAGTTTGTGGTGGTGCCGAAGAGTGAGGATGTTTGTGGGAGTATGGCGGCGGCAGCGCCGGTGGAATTTGCGGCGAGGATTGGGCTGAATTTAGGGGGAAGGACGTATTTCTCGTCGGAGGAGGAGGAGTTTGTGAACCGGCTGTACCGGAGGACGAGAACCGGCGGCGAAATGGGCGGTTCGGGGAATTGGGCGGTTCGGTGTCAAGCGGAGGGGTGTAATGCGGATCTGAGTCAAGCGAAGCACTACCACCGACGCCATAAGGTTTGTGAGTTTCATTCTAAAGCTTCCACTGTCATCACCGCCGGGTTGACTCAGAGGTTCTGTCAACAATGCAGCAGGTTTCATGTACTAGCAGAGTTTGATAATGGAAAACGAAGTTGTCGCAAAAGATTGGCAGATCACAACCGTCGACGAAGAAAGTCTCAACAATCCCATCAAGGAAGCCCCAACTCATCTCGACCACTTGAAACTACTACTTCTTCAACTGATTCTACTGCTGCGAGGTCCGGAATGGAGGCAACAGGACAGTCAGCGTGGTCGGTAACAGTGGCAGTGTCTCCGGCGAGAATGTCATTGGACTGCCTTAACCAAAGGCCATATTGA MLDYEWGSTNPPPIIISGEESEPVFNSDPTNSHNFPTFVDHHHNTFLPPPPPPPTTAAFSSHYGGFYDHPQSYTMVPSSHHYDSVAGGGGEFVVVPKSEDVCGSMAAAAPVEFAARIGLNLGGRTYFSSEEEEFVNRLYRRTRTGGEMGGSGNWAVRCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVITAGLTQRFCQQCSRFHVLAEFDNGKRSCRKRLADHNRRRRKSQQSHQGSPNSSRPLETTTSSTDSTAARSGMEATGQSAWSVTVAVSPARMSLDCLNQRPY
BLAST of Lsi09G016300 vs. Swiss-Prot
Match: SPL8_ARATH (Squamosa promoter-binding-like protein 8 OS=Arabidopsis thaliana GN=SPL8 PE=1 SV=2) HSP 1 Score: 210.3 bits (534), Expect = 2.8e-53 Identity = 144/336 (42.86%), Postives = 174/336 (51.79%), Query Frame = 1
BLAST of Lsi09G016300 vs. Swiss-Prot
Match: SPL5_ORYSJ (Squamosa promoter-binding-like protein 5 OS=Oryza sativa subsp. japonica GN=SPL5 PE=2 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 2.8e-37 Identity = 108/217 (49.77%), Postives = 124/217 (57.14%), Query Frame = 1
BLAST of Lsi09G016300 vs. Swiss-Prot
Match: SPL10_ORYSJ (Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. japonica GN=SPL10 PE=2 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 7.0e-36 Identity = 103/232 (44.40%), Postives = 124/232 (53.45%), Query Frame = 1
BLAST of Lsi09G016300 vs. Swiss-Prot
Match: SPL10_ORYSI (Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. indica GN=SPL10 PE=2 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 7.0e-36 Identity = 103/232 (44.40%), Postives = 124/232 (53.45%), Query Frame = 1
BLAST of Lsi09G016300 vs. Swiss-Prot
Match: LG1_MAIZE (Protein LIGULELESS 1 OS=Zea mays GN=LG1 PE=2 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.4e-31 Identity = 104/227 (45.81%), Postives = 121/227 (53.30%), Query Frame = 1
BLAST of Lsi09G016300 vs. TrEMBL
Match: A0A0A0KA35_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G109120 PE=4 SV=1) HSP 1 Score: 497.3 bits (1279), Expect = 1.3e-137 Identity = 254/297 (85.52%), Postives = 273/297 (91.92%), Query Frame = 1
BLAST of Lsi09G016300 vs. TrEMBL
Match: M5X0V7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008560mg PE=4 SV=1) HSP 1 Score: 285.8 bits (730), Expect = 5.9e-74 Identity = 175/322 (54.35%), Postives = 210/322 (65.22%), Query Frame = 1
BLAST of Lsi09G016300 vs. TrEMBL
Match: A0A061DU97_THECC (Squamosa promoter binding protein-like 8 OS=Theobroma cacao GN=TCM_005622 PE=4 SV=1) HSP 1 Score: 266.9 bits (681), Expect = 2.8e-68 Identity = 175/326 (53.68%), Postives = 200/326 (61.35%), Query Frame = 1
BLAST of Lsi09G016300 vs. TrEMBL
Match: V4TE21_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021106mg PE=4 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 5.3e-67 Identity = 166/329 (50.46%), Postives = 205/329 (62.31%), Query Frame = 1
BLAST of Lsi09G016300 vs. TrEMBL
Match: A0A067HCW1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020302mg PE=4 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 5.3e-67 Identity = 166/329 (50.46%), Postives = 205/329 (62.31%), Query Frame = 1
BLAST of Lsi09G016300 vs. TAIR10
Match: AT1G02065.1 (AT1G02065.1 squamosa promoter binding protein-like 8) HSP 1 Score: 210.3 bits (534), Expect = 1.6e-54 Identity = 144/336 (42.86%), Postives = 174/336 (51.79%), Query Frame = 1
BLAST of Lsi09G016300 vs. TAIR10
Match: AT3G60030.1 (AT3G60030.1 squamosa promoter-binding protein-like 12) HSP 1 Score: 125.9 bits (315), Expect = 3.9e-29 Identity = 69/136 (50.74%), Postives = 87/136 (63.97%), Query Frame = 1
BLAST of Lsi09G016300 vs. TAIR10
Match: AT2G47070.1 (AT2G47070.1 squamosa promoter binding protein-like 1) HSP 1 Score: 117.5 bits (293), Expect = 1.4e-26 Identity = 55/86 (63.95%), Postives = 64/86 (74.42%), Query Frame = 1
BLAST of Lsi09G016300 vs. TAIR10
Match: AT5G50670.1 (AT5G50670.1 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein) HSP 1 Score: 117.5 bits (293), Expect = 1.4e-26 Identity = 65/153 (42.48%), Postives = 82/153 (53.59%), Query Frame = 1
BLAST of Lsi09G016300 vs. TAIR10
Match: AT5G50570.1 (AT5G50570.1 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein) HSP 1 Score: 117.5 bits (293), Expect = 1.4e-26 Identity = 65/153 (42.48%), Postives = 82/153 (53.59%), Query Frame = 1
BLAST of Lsi09G016300 vs. NCBI nr
Match: gi|659116546|ref|XP_008458127.1| (PREDICTED: squamosa promoter-binding-like protein 8 [Cucumis melo]) HSP 1 Score: 506.5 bits (1303), Expect = 3.0e-140 Identity = 258/299 (86.29%), Postives = 276/299 (92.31%), Query Frame = 1
BLAST of Lsi09G016300 vs. NCBI nr
Match: gi|449445457|ref|XP_004140489.1| (PREDICTED: squamosa promoter-binding-like protein 8 [Cucumis sativus]) HSP 1 Score: 497.3 bits (1279), Expect = 1.8e-137 Identity = 254/297 (85.52%), Postives = 273/297 (91.92%), Query Frame = 1
BLAST of Lsi09G016300 vs. NCBI nr
Match: gi|596004986|ref|XP_007218335.1| (hypothetical protein PRUPE_ppa008560mg [Prunus persica]) HSP 1 Score: 285.8 bits (730), Expect = 8.4e-74 Identity = 175/322 (54.35%), Postives = 210/322 (65.22%), Query Frame = 1
BLAST of Lsi09G016300 vs. NCBI nr
Match: gi|657968189|ref|XP_008375792.1| (PREDICTED: squamosa promoter-binding-like protein 8 [Malus domestica]) HSP 1 Score: 277.3 bits (708), Expect = 3.0e-71 Identity = 171/335 (51.04%), Postives = 210/335 (62.69%), Query Frame = 1
BLAST of Lsi09G016300 vs. NCBI nr
Match: gi|694395762|ref|XP_009373190.1| (PREDICTED: squamosa promoter-binding-like protein 8 [Pyrus x bretschneideri]) HSP 1 Score: 276.9 bits (707), Expect = 3.9e-71 Identity = 171/336 (50.89%), Postives = 209/336 (62.20%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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