CSPI06G08780 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G08780
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Squamosa promoter binding protein-like protein
Location	Chr6 : 7371451 .. 7374883 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGCCGCCACCGTCGCCGTCCACGGCGGCGTTCAGTTCTCACTTAGGCGGATTCTACAACCATCCACAGAGCTACACTATGGGTGCTTCTTCATCTCATCATTATAATAGTGTGACCGGGGGTGGAGGGGAGTTTATGTTGGTGCCGAAGAGTGAGAATGTTTGTGGGAGTATAGGGGCGGCGGCGCCGGCGGAATTTGCGGCGAGGATTGGGTTGAATTTGGGGGGAAGGACGTATTTCTCGTCAGAGGAAGAAGAGTTTGTGAACCGGCTGTACCGTAGGACGAGAACCGGCAGCGAAATGGGTGGTTCGGGGAATTGGGCGGTTCGGTGTCAAGCGGAGGGGTGTAATGCGGATCTGAGTCAAGCGAAGCATTACCACCGACGACATAAGGTTTGTGAGTTTCATTCTAAAGCTTCCACTGTCATCACCGCCGGGTTGACTCAGAGGTTCTGTCAACAGTGCAGCAGGTTCCTTCCTCTCTCTCTTTCTCTTTTGTTGTGAATTTCCTAAGTTACCCCTCTGGTTGTCCTTCTCGACCTCGTTCTGATTATTATTTAATGCGGTTGTCACAATATGAGGTAAACAAATATTAAAACTTTGTTAGTACAACAGCAATGGAGATAGATGATTGGACGTTTCTCTCTGCTAAACTCACCCTATAAAAATATAAAATTTTACTTAATCTATAATCATCAAATTATTGTTTGAACTTTGATGCATTTTTCATTAATGTCTACTATGTATATAACATATTTACATACATGGTAGATACAAAATTTTCGTTAGATGCTATATAATCAATTTCATATTCATAAACAAAAACAATTAAAGTCATTGACTAGTGTATATCTAGAAACACGAAATGCAATATAAACGAGATACTAAACAGACTTTTAAGGAGTATGAAGTTGGATGGACGCTCTTTGATGCTTTCATTATAACACAATTGGTCTTTTCAACTACTATAATATATTATGTAACTACATTATCTAACAAGAGTTAACTCAATTGACATTTATATTTACGGAAGATAGAAGAAGTTATATGTTCAAATCATCAATAGTTGTGTGATTTGAACTTCTACTGTGTTTATTATTAATTTTTATAATATTTACCATATGTAATTATCCTCCATTATTATTTAAATATAGATTAAAATAGTCTACATCATTTTAAATAGATATTATAACAACTATTGTCTCTACAATAACTAAGTAAATACTAAAATAGCCTGTTAATCATAATTTATAATGAATAGGAGTGGAAGAATTTGAATGAGGAACGAGTGAACAACTTATTAAATTTGAAGCTTAGTAAGGGATGTAGATAAGAATATAAATTTTTATAGGACATAGGTTATCAATTATTTGAAAGGGTTTCACCCACTAGTAACTAAAATTGAATGTTTTTGTTTGCATACATAGTAAGGTGTTTGGAGGGGGCATCCTAAACAAAAGTGTAAATGACGTAAATGCCCTCCAATGAGGCCAATGATTTGGTTAGGTTAGCCATATTCGTGGAGTAAATGTAAATCCCGAGGGTAATTCCGTCCGTGACAAAAAAAAGGAAAAAAAGAAAAAAGTGAGTGTAGTTTTGAGGTTTGACGTGTGGGTCTACATGACCCCCTCTCACAAAAGCCCTAGAGCAGCTTTCCTTAGATGGGTGCAAATCTTACTCAAATACCCAAAATACCCCCACCATTTTCTTTTTCTTATCATCAACACAATCATTGCCCCCCTTTCCGTACATTGAGAAAATCTCAAGGGCATTTCCGTCCCTAAATGTCCACAATCCTTTCGAGACTGTCCTTCACTCAACTTGCCATTTTCGTACCACTTTATTTGGTAGATACACACCTTCTTTCATTTATTAACCAAACCTCTTCTCTAAGAATTCCAGTTTGTTGCTTATAATTTAGTTTCTCACCTCTACAAATTTTCATTTTCTGCTTCCTGCCTCAAACCACCTTTTTACAGTTCCATGCTGTGATTCTAATTGCTTTTGAGCTCTTTTTATGTTTATTTGTTGTACTAAAAGAAAAATACAATTTTACTGAACTTACTTAAAACATGGTAAAATTGCTCTTCCTTATTTAAAATTCTGCATGAGTAATACAAGCATGTACATTCTCATCACACACACAAAAGAAGTAAAAATATTTTAAGGAAAAAGCTTGGTGCATCTATTTTTATACATCTAACTAAATTGTCTAGTTATATTTTATTATATGACAAAATCTTTTAAATGATTGTGATGAGATGATAATGCATAAAGAGACTCTATCCAAGAGTGTTGTTAAATATTAAAAAGAAAAAACATGTTTGAAGAGTTTGCATTATAACAAACTAATTAATAGAATGTATAAAAGAATAGTGGTATAGCTCTTATATTTTAGTAGTTATGTCGTTTACATTTACTATATATATATATTTGTAATGAAATATAATATGAGTTTATCTTTTAGGGGTTTTTATTCTTCTGGGCAAGTGTGTGTTTTTGTATTGGTTGTAGGTTTCATGTAGTAGGAGAGTTTGATAATGGAAAACGGAGTTGCCGAAAAAGATTGGCAGATCACAACCGTCGACGGAGAAAGACTCAACAACCTCATCATCAACCAACCCCTAACTCATCGCAACTGATTCAAAGTACCACTTCTTCTCCAACTCATTCTGCTGCCACCAGTAAGTCACGACTAATTCATCACTTCTTTTTTTTAATTAGTTGAGTTAGGTTAAATTGAGTTAATACGACATTTATTCAATCCAAAACCCACCACTACTTGATAAAGAAACAAAAAATTTAACCCCAACCTACTCAACTTAAAAACAAGACTATAATCCAATCAAGTCAATATAGCATGGGTTGTGTACGTAGTTTGAGTTGTTTAGGTTTTCAGGTCATTTGGATGTACACAAAATCTATCAACTCTCTAATAACAAATTATCGTGTAAAATTTATTTTGAAAAAGAAAAACACTTTCTTCTTTTGCAATTTAAAAGATGCATTTGATCATGTTATTATAGTTTAAGTCCAATTTTAATTAATGCAATTGGGTTTTTGTAGGATCAACAATGGAGTCAACCGGACAATCAACATGGTCGGTAACTGTGGCAGTGTCTTCTCCAACAAGAATGTCACTAGACTGCCTTAACCAACAACCTTACTAAATCTATAAGATATTCTTCTCAATGACCGTGACAAGAACGAATGACAAAATAATAGAATTTAATTAGGAAATAACATAGAGAAGAATATTATATATGATTGATATGTGTATTTGTGTGTAAACAGTAGTTATTAACTAATTAATCTTCTATATATTAGTTGTAGCTAGATTTTCATTTTCTCCCTTGTGTGTACTAGTGTCACAAAGTAGAGTAGTCTTCTTGTCTTTTGGAGTATAATAATTGTAGATTGGAAAAACCTTGAC

mRNA sequence

ATGGGTGCTTCTTCATCTCATCATTATAATAGTGTGACCGGGGGTGGAGGGGAGTTTATGTTGGTGCCGAAGAGTGAGAATGTTTGTGGGAGTATAGGGGCGGCGGCGCCGGCGGAATTTGCGGCGAGGATTGGGTTGAATTTGGGGGGAAGGACGTATTTCTCGTCAGAGGAAGAAGAGTTTGTGAACCGGCTGTACCGTAGGACGAGAACCGGCAGCGAAATGGGTGGTTCGGGGAATTGGGCGGTTCGGTGTCAAGCGGAGGGGTGTAATGCGGATCTGAGTCAAGCGAAGCATTACCACCGACGACATAAGGTTTGTGAGTTTCATTCTAAAGCTTCCACTGTCATCACCGCCGGGTTGACTCAGAGGTTCTGTCAACAGTGCAGCAGGTTTCATGTAGTAGGAGAGTTTGATAATGGAAAACGGAGTTGCCGAAAAAGATTGGCAGATCACAACCGTCGACGGAGAAAGACTCAACAACCTCATCATCAACCAACCCCTAACTCATCGCAACTGATTCAAAGTACCACTTCTTCTCCAACTCATTCTGCTGCCACCAGATCAACAATGGAGTCAACCGGACAATCAACATGGTCGGTAACTGTGGCAGTGTCTTCTCCAACAAGAATGTCACTAGACTGCCTTAACCAACAACCTTACTAA

Coding sequence (CDS)

ATGGGTGCTTCTTCATCTCATCATTATAATAGTGTGACCGGGGGTGGAGGGGAGTTTATGTTGGTGCCGAAGAGTGAGAATGTTTGTGGGAGTATAGGGGCGGCGGCGCCGGCGGAATTTGCGGCGAGGATTGGGTTGAATTTGGGGGGAAGGACGTATTTCTCGTCAGAGGAAGAAGAGTTTGTGAACCGGCTGTACCGTAGGACGAGAACCGGCAGCGAAATGGGTGGTTCGGGGAATTGGGCGGTTCGGTGTCAAGCGGAGGGGTGTAATGCGGATCTGAGTCAAGCGAAGCATTACCACCGACGACATAAGGTTTGTGAGTTTCATTCTAAAGCTTCCACTGTCATCACCGCCGGGTTGACTCAGAGGTTCTGTCAACAGTGCAGCAGGTTTCATGTAGTAGGAGAGTTTGATAATGGAAAACGGAGTTGCCGAAAAAGATTGGCAGATCACAACCGTCGACGGAGAAAGACTCAACAACCTCATCATCAACCAACCCCTAACTCATCGCAACTGATTCAAAGTACCACTTCTTCTCCAACTCATTCTGCTGCCACCAGATCAACAATGGAGTCAACCGGACAATCAACATGGTCGGTAACTGTGGCAGTGTCTTCTCCAACAAGAATGTCACTAGACTGCCTTAACCAACAACCTTACTAA

Homology

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BLAST of CSPI06G08780 vs. Swiss-Prot
Match: SPL8_ARATH (Squamosa promoter-binding-like protein 8 OS=Arabidopsis thaliana GN=SPL8 PE=1 SV=2)

HSP 1 Score: 190.7 bits (483), Expect = 1.8e-47
Identity = 109/211 (51.66%), Postives = 137/211 (64.93%), Query Frame = 1


Query: 13  TGGGGEF-MLVPKSENVCGSIGAAAPAEFAA-RIGLNLGGRTYFSSEEEEFVNRLYRRTR 72
           +G G  +  L+PK+E            +F + RIGLNLGGRTYFS+ +++FV+RLYRR+R
Sbjct: 125 SGSGSSYNFLIPKTE-----------VDFTSNRIGLNLGGRTYFSAADDDFVSRLYRRSR 184

Query: 73  TGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVITAGLTQRFCQQCS 132
            G     +     RCQAEGCNADLS AKHYHRRHKVCEFHSKASTV+ AGL+QRFCQQCS
Sbjct: 185 PGESGMANSLSTPRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQCS 244

Query: 133 RFHVVGEFDNGKRSCRKRLADHNRRRRKTQQPHHQPTPNSSQLIQSTTSSPTHSAATRST 192
           RFH++ EFDNGKRSCRKRLADHNRRRRK  Q         +   ++T  SP  S    S+
Sbjct: 245 RFHLLSEFDNGKRSCRKRLADHNRRRRKCHQSASATQDTGTG--KTTPKSPNDSGVKASS 304

Query: 193 MESTGQSTWSVTVAVSSPTRMSLDCLNQQPY 222
             S+           ++P  +SL+C  Q+ +
Sbjct: 305 SPSS-----------NAPPTISLECFRQRQF 311

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BLAST of CSPI06G08780 vs. Swiss-Prot
Match: SPL10_ORYSJ (Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. japonica GN=SPL10 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.2e-35
Identity = 91/186 (48.92%), Postives = 112/186 (60.22%), Query Frame = 1


Query: 41  AARIGLNLGGRTYFSSEEEEFVNRLYRRTRTGSEMG----GSGNWAVRCQAEGCNADLSQ 100
           A RIGLNLG RTYFS  +   V+RL  R+R G   G    G+ +   RCQAEGC ADLS 
Sbjct: 133 AGRIGLNLGRRTYFSPGDMLAVDRLLMRSRLGGVFGLGFGGAHHQPPRCQAEGCKADLSG 192

Query: 101 AKHYHRRHKVCEFHSKASTVITAGLTQRFCQQCSRFHVVGEFDNGKRSCRKRLADHNRRR 160
           AKHYHRRHKVCE+H+KAS V  +G  QRFCQQCSRFHV+ EFD  KRSCRKRLA+HNRRR
Sbjct: 193 AKHYHRRHKVCEYHAKASVVAASGKQQRFCQQCSRFHVLTEFDEAKRSCRKRLAEHNRRR 252

Query: 161 RKTQQPHHQPTPNSSQLIQSTTSS---PTHSAATRSTMESTGQSTWSVTVAVSSPTRMSL 220
           RK           +     +  ++   P+  AAT  T ++    + S   +  S     +
Sbjct: 253 RKPAAAATTAVAAAKDAAAAPVAAGKKPSGGAATSYTGDNKNVVSMSAAKSPISSNTSVI 312

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BLAST of CSPI06G08780 vs. Swiss-Prot
Match: SPL10_ORYSI (Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. indica GN=SPL10 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.2e-35
Identity = 91/186 (48.92%), Postives = 112/186 (60.22%), Query Frame = 1


Query: 41  AARIGLNLGGRTYFSSEEEEFVNRLYRRTRTGSEMG----GSGNWAVRCQAEGCNADLSQ 100
           A RIGLNLG RTYFS  +   V+RL  R+R G   G    G+ +   RCQAEGC ADLS 
Sbjct: 133 AGRIGLNLGRRTYFSPGDMLAVDRLLMRSRLGGVFGLGFGGAHHQPPRCQAEGCKADLSG 192

Query: 101 AKHYHRRHKVCEFHSKASTVITAGLTQRFCQQCSRFHVVGEFDNGKRSCRKRLADHNRRR 160
           AKHYHRRHKVCE+H+KAS V  +G  QRFCQQCSRFHV+ EFD  KRSCRKRLA+HNRRR
Sbjct: 193 AKHYHRRHKVCEYHAKASVVAASGKQQRFCQQCSRFHVLTEFDEAKRSCRKRLAEHNRRR 252

Query: 161 RKTQQPHHQPTPNSSQLIQSTTSS---PTHSAATRSTMESTGQSTWSVTVAVSSPTRMSL 220
           RK           +     +  ++   P+  AAT  T ++    + S   +  S     +
Sbjct: 253 RKPAAAATTAVAAAKDAAAAPVAAGKKPSGGAATSYTGDNKNVVSMSAAKSPISSNTSVI 312

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BLAST of CSPI06G08780 vs. Swiss-Prot
Match: SPL5_ORYSJ (Squamosa promoter-binding-like protein 5 OS=Oryza sativa subsp. japonica GN=SPL5 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.7e-34
Identity = 103/208 (49.52%), Postives = 120/208 (57.69%), Query Frame = 1


Query: 15  GGGEFMLVPKSENVCGSIGAAAPAEFAARIGLNLGGRTYFSSEEEEFVNRLYRRTRTGS- 74
           GGG F+   K E+  G +          RIGLNLG RTYFS  +   V+RL  R+R G  
Sbjct: 126 GGGGFV---KRED--GPVLDVVGGGGGGRIGLNLGRRTYFSPADVLAVDRLLLRSRLGGM 185

Query: 75  --EMG------GSGNWAV-------RCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVIT 134
             EMG      G G  A        RCQAEGC ADLS AKHYHRRHKVC+FH+KA+ V+ 
Sbjct: 186 GMEMGMGMGVLGLGLAAAAHHHQPPRCQAEGCKADLSAAKHYHRRHKVCDFHAKAAAVLA 245

Query: 135 AGLTQRFCQQCSRFHVVGEFDNGKRSCRKRLADHNRRRRKT----QQPHHQPTPNSSQ-- 194
           AG  QRFCQQCSRFHV+ EFD  KRSCRKRL +HNRRRRK     Q     P P  S+  
Sbjct: 246 AGKQQRFCQQCSRFHVLAEFDEAKRSCRKRLTEHNRRRRKPTAGGQSSKDSPPPPPSKKG 305

Query: 195 ---LIQSTTSSPTHSAATRSTMESTGQS 198
               I S+ +S  H  A  ST  ++G S
Sbjct: 306 TDASIASSYTSCDHHKAAASTTTASGVS 328

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BLAST of CSPI06G08780 vs. Swiss-Prot
Match: LG1_MAIZE (Protein LIGULELESS 1 OS=Zea mays GN=LG1 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.7e-29
Identity = 82/164 (50.00%), Postives = 100/164 (60.98%), Query Frame = 1


Query: 38  AEFAA-RIGLNLGGRTYFSSEEEEFVNRLYRRTRTGSEMGGS--GNWAVRCQAEGCNADL 97
           A FAA ++GLNLG RTYF                     GG   G+   RCQAEGC ADL
Sbjct: 153 ASFAATQLGLNLGYRTYFPPR------------------GGYTYGHHPPRCQAEGCKADL 212

Query: 98  SQAKHYHRRHKVCEFHSKASTVITAG-LTQRFCQQCSRFHVVGEFDNGKRSCRKRLADHN 157
           S AK YHRRHKVCE HSKA  V+TAG L QRFCQQCSRFH++ EFD+ K+SCRKRLADHN
Sbjct: 213 SSAKRYHRRHKVCEHHSKAPVVVTAGGLHQRFCQQCSRFHLLDEFDDAKKSCRKRLADHN 272

Query: 158 RRRRKTQQPHHQPTPNSSQLIQSTTSSPTHSAATRSTMESTGQS 198
           RRRRK++       P+ +       +    +AA +   ES+ ++
Sbjct: 273 RRRRKSK-------PSDADAGDKKRAHANKAAAAKDKAESSSKN 291

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BLAST of CSPI06G08780 vs. TrEMBL
Match: A0A0A0KA35_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G109120 PE=4 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 6.4e-121
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1


Query: 1   MGASSSHHYNSVTGGGGEFMLVPKSENVCGSIGAAAPAEFAARIGLNLGGRTYFSSEEEE 60
           MGASSSHHYNSVTGGGGEFMLVPKSENVCGSIGAAAPAEFAARIGLNLGGRTYFSSEEEE
Sbjct: 77  MGASSSHHYNSVTGGGGEFMLVPKSENVCGSIGAAAPAEFAARIGLNLGGRTYFSSEEEE 136

Query: 61  FVNRLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVITAG 120
           FVNRLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVITAG
Sbjct: 137 FVNRLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVITAG 196

Query: 121 LTQRFCQQCSRFHVVGEFDNGKRSCRKRLADHNRRRRKTQQPHHQPTPNSSQLIQSTTSS 180
           LTQRFCQQCSRFHVVGEFDNGKRSCRKRLADHNRRRRKTQQPHHQPTPNSSQLIQSTTSS
Sbjct: 197 LTQRFCQQCSRFHVVGEFDNGKRSCRKRLADHNRRRRKTQQPHHQPTPNSSQLIQSTTSS 256

Query: 181 PTHSAATRSTMESTGQSTWSVTVAVSSPTRMSLDCLNQQPY 222
           PTHSAATRSTMESTGQSTWSVTVAVSSPTRMSLDCLNQQPY
Sbjct: 257 PTHSAATRSTMESTGQSTWSVTVAVSSPTRMSLDCLNQQPY 297

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BLAST of CSPI06G08780 vs. TrEMBL
Match: H9CNK3_BETPL (Squamosa promoter binding protein-like 8 OS=Betula platyphylla GN=SPL8 PE=2 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 3.3e-61
Identity = 136/218 (62.39%), Postives = 158/218 (72.48%), Query Frame = 1


Query: 4   SSSHHYNSVTGGGGEFMLVPKSENVCGSIGAAAPAEFAARIGLNLGGRTYFSSEEEEFVN 63
           S  H  N   G GG ++LVPKSE        +   +F +R+GLNLGGRTYFSS E+EFVN
Sbjct: 91  SLDHPVNGAAGSGGGYLLVPKSEEA-----VSRSVDFVSRLGLNLGGRTYFSSAEDEFVN 150

Query: 64  RLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVITAGLTQ 123
           RLYRR+R      GS N + RCQAEGCNADL+ AKHYHRRHKVCEFHSKASTVI AGLTQ
Sbjct: 151 RLYRRSRPTEP--GSAN-SPRCQAEGCNADLTHAKHYHRRHKVCEFHSKASTVIAAGLTQ 210

Query: 124 RFCQQCSRFHVVGEFDNGKRSCRKRLADHNRRRRKTQQPHHQPTPNSSQLIQSTTSSPTH 183
           RFCQQCSRFH++ EFDNGKRSCRKRLADHNRRRRKT    HQP P   + ++S   +  +
Sbjct: 211 RFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKT----HQPNP---EQLKSQPDNARN 270

Query: 184 SAATRSTMESTGQSTWSVTVAVSSPTRMSLDCLNQQPY 222
            ++ RS  +S   ST SVTVAV SP RMSLDC  Q+P+
Sbjct: 271 PSSERSPPDSGAHSTSSVTVAV-SPPRMSLDCFRQRPF 292

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BLAST of CSPI06G08780 vs. TrEMBL
Match: M5X0V7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008560mg PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.1e-59
Identity = 140/226 (61.95%), Postives = 165/226 (73.01%), Query Frame = 1


Query: 3   ASSSHH----YNSVTGGGGE-FMLVPKSENVCGSIGAAAPAEFAARIGLNLGGRTYFSSE 62
           A  +HH     + + GG     +LVPKSE++C       P +FA+RIGLNLGGRTYFSSE
Sbjct: 95  APPNHHPLLSLDPIQGGAAHGLILVPKSEDLC------RPVDFASRIGLNLGGRTYFSSE 154

Query: 63  EEEFVNRLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVI 122
           ++ F+NRLYRRTR  +E G   N A RCQAEGC ADLS AKHYHRRHKVCEFHSKASTVI
Sbjct: 155 DD-FMNRLYRRTRPATETGS--NHAPRCQAEGCTADLSHAKHYHRRHKVCEFHSKASTVI 214

Query: 123 TAGLTQRFCQQCSRFHVVGEFDNGKRSCRKRLADHNRRRRKTQQPHHQPTPNS--SQLIQ 182
             GLTQRFCQQCSRFH++ EFDNGKRSCR+RLADHNRRRRKTQQ  +Q   NS   QL++
Sbjct: 215 ANGLTQRFCQQCSRFHLLPEFDNGKRSCRRRLADHNRRRRKTQQT-NQENHNSQVQQLVE 274

Query: 183 STTSSPTHSAATRSTMESTGQSTWSVTVAVSSPTRMSLDCLNQQPY 222
           +  +S + + A RS  ES   S  SVTVA+ SP RM+LDC  Q+PY
Sbjct: 275 NARNSSSDNVA-RSPPESAAHSASSVTVAL-SPPRMTLDCFRQRPY 308

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BLAST of CSPI06G08780 vs. TrEMBL
Match: A0A0B0N0S5_GOSAR (Squamosa promoter-binding-like protein 8 OS=Gossypium arboreum GN=F383_34958 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 3.1e-59
Identity = 132/213 (61.97%), Postives = 157/213 (73.71%), Query Frame = 1


Query: 10  NSVTGGGGEFMLVPKSENVCGSIGAAAPAEFAARIGLNLGGRTYFSSEEEEFVNRLYRRT 69
           ++V G GG + LVPK+E V      + P +F ARIGLNLGGRTYFSS E++FVNRLYRR+
Sbjct: 108 SAVGGSGGGYFLVPKTEEV------SRPVDFTARIGLNLGGRTYFSSAEDDFVNRLYRRS 167

Query: 70  RTGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVITAGLTQRFCQQC 129
           R G     S   + RCQAEGCNADL+ AKHYHRRHKVCEFHSKASTVI AGLTQRFCQQC
Sbjct: 168 RPGDL---SSTNSPRCQAEGCNADLTHAKHYHRRHKVCEFHSKASTVIAAGLTQRFCQQC 227

Query: 130 SRFHVVGEFDNGKRSCRKRLADHNRRRRKTQQPHHQPTPNSSQLIQ-STTSSPTHSAATR 189
           SRFH++ EFDNGKRSCRKRLADHNRRRRK+QQ     T    + +Q  +  +P+     R
Sbjct: 228 SRFHLLSEFDNGKRSCRKRLADHNRRRRKSQQQQPNTTQEHQKHLQLESGGNPSCDNPPR 287

Query: 190 STMESTGQSTWSVTVAVSSPTRMSLDCLNQQPY 222
           S  +S  QS+ SVTVA +SP R+SLDC  Q+P+
Sbjct: 288 SPPDSGVQSSSSVTVA-ASPPRISLDCFRQRPH 310

[Close]

BLAST of CSPI06G08780 vs. TrEMBL
Match: A0A022QTE2_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a009702mg PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 3.1e-59
Identity = 137/209 (65.55%), Postives = 162/209 (77.51%), Query Frame = 1


Query: 14  GGGGEFMLVPKSENVCGSIGAAAPAEFAARIGLNLGGRTYFSSEEEEFVNRLYRRTRTGS 73
           GG   +M+VPKSE V  ++G     E+ +RIGLNLGGRTYF+S E++FVNRLYRR+R   
Sbjct: 117 GGQTGYMMVPKSEPV--NVGGL---EYNSRIGLNLGGRTYFASSEDDFVNRLYRRSRALE 176

Query: 74  EMGGSGNWAVRCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVITAGLTQRFCQQCSRFH 133
              GS N + RCQAEGCNADL+ AKHYHRRHKVC+FHSKASTVI AGLTQRFCQQCSRFH
Sbjct: 177 P--GSMN-SPRCQAEGCNADLTHAKHYHRRHKVCDFHSKASTVIAAGLTQRFCQQCSRFH 236

Query: 134 VVGEFDNGKRSCRKRLADHNRRRRKTQQPHHQPTPNSSQLIQST-TSSPTHSAATRSTME 193
           ++ EFDNGKRSCRKRLADHNRRRRK+QQP  +    S QLI+ST T+S + + ATRS  +
Sbjct: 237 LLSEFDNGKRSCRKRLADHNRRRRKSQQPSQENPNKSHQLIESTATNSSSENLATRSPPD 296

Query: 194 STGQSTWSVTVAVSSPTRMSLDCLNQQPY 222
           S G  + SVTVAV SP R+SLDC  Q+ Y
Sbjct: 297 S-GHHSSSVTVAV-SPPRISLDCFGQRSY 315

[Close]

BLAST of CSPI06G08780 vs. TAIR10
Match: AT1G02065.1 (AT1G02065.1 squamosa promoter binding protein-like 8)

HSP 1 Score: 190.7 bits (483), Expect = 9.9e-49
Identity = 109/211 (51.66%), Postives = 137/211 (64.93%), Query Frame = 1


Query: 13  TGGGGEF-MLVPKSENVCGSIGAAAPAEFAA-RIGLNLGGRTYFSSEEEEFVNRLYRRTR 72
           +G G  +  L+PK+E            +F + RIGLNLGGRTYFS+ +++FV+RLYRR+R
Sbjct: 125 SGSGSSYNFLIPKTE-----------VDFTSNRIGLNLGGRTYFSAADDDFVSRLYRRSR 184

Query: 73  TGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVITAGLTQRFCQQCS 132
            G     +     RCQAEGCNADLS AKHYHRRHKVCEFHSKASTV+ AGL+QRFCQQCS
Sbjct: 185 PGESGMANSLSTPRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQCS 244

Query: 133 RFHVVGEFDNGKRSCRKRLADHNRRRRKTQQPHHQPTPNSSQLIQSTTSSPTHSAATRST 192
           RFH++ EFDNGKRSCRKRLADHNRRRRK  Q         +   ++T  SP  S    S+
Sbjct: 245 RFHLLSEFDNGKRSCRKRLADHNRRRRKCHQSASATQDTGTG--KTTPKSPNDSGVKASS 304

Query: 193 MESTGQSTWSVTVAVSSPTRMSLDCLNQQPY 222
             S+           ++P  +SL+C  Q+ +
Sbjct: 305 SPSS-----------NAPPTISLECFRQRQF 311

[Close]

BLAST of CSPI06G08780 vs. TAIR10
Match: AT3G60030.1 (AT3G60030.1 squamosa promoter-binding protein-like 12)

HSP 1 Score: 127.1 bits (318), Expect = 1.4e-29
Identity = 65/118 (55.08%), Postives = 80/118 (67.80%), Query Frame = 1


Query: 41  AARIGLNLGGRTYFSSEEEEFVNRLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHY 100
           A R+ LNLGG     +          ++T+ G   GG  + A+ CQ + C ADLS+ K Y
Sbjct: 94  AHRLTLNLGGNNIEGNG--------VKKTKLG---GGIPSRAICCQVDNCGADLSKVKDY 153

Query: 101 HRRHKVCEFHSKASTVITAGLTQRFCQQCSRFHVVGEFDNGKRSCRKRLADHNRRRRK 159
           HRRHKVCE HSKA+T +  G+ QRFCQQCSRFHV+ EFD GKRSCR+RLA HN+RRRK
Sbjct: 154 HRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFDEGKRSCRRRLAGHNKRRRK 200

[Close]

BLAST of CSPI06G08780 vs. TAIR10
Match: AT1G20980.1 (AT1G20980.1 squamosa promoter binding protein-like 14)

HSP 1 Score: 121.3 bits (303), Expect = 7.4e-28
Identity = 67/121 (55.37%), Postives = 79/121 (65.29%), Query Frame = 1


Query: 44  IGLNLG-GRTYFSSEEEEFVN-RLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHYH 103
           + LNLG G T          N R  ++ R+GS     GN+ + CQ + C  DLS AK YH
Sbjct: 81  LDLNLGSGLTAVEETTTTTQNVRPNKKVRSGSP---GGNYPM-CQVDNCTEDLSHAKDYH 140

Query: 104 RRHKVCEFHSKASTVITAGLTQRFCQQCSRFHVVGEFDNGKRSCRKRLADHNRRRRKTQQ 163
           RRHKVCE HSKA+  +     QRFCQQCSRFH++ EFD GKRSCR+RLA HNRRRRKT Q
Sbjct: 141 RRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGKRSCRRRLAGHNRRRRKTTQ 197

[Close]

BLAST of CSPI06G08780 vs. TAIR10
Match: AT2G47070.1 (AT2G47070.1 squamosa promoter binding protein-like 1)

HSP 1 Score: 120.2 bits (300), Expect = 1.7e-27
Identity = 53/75 (70.67%), Postives = 61/75 (81.33%), Query Frame = 1


Query: 85  CQAEGCNADLSQAKHYHRRHKVCEFHSKASTVITAGLTQRFCQQCSRFHVVGEFDNGKRS 144
           CQ E C ADLS+ K YHRRHKVCE HSKA++    G+ QRFCQQCSRFH++ EFD GKRS
Sbjct: 106 CQVENCEADLSKVKDYHRRHKVCEMHSKATSATVGGILQRFCQQCSRFHLLQEFDEGKRS 165

Query: 145 CRKRLADHNRRRRKT 160
           CR+RLA HN+RRRKT
Sbjct: 166 CRRRLAGHNKRRRKT 180

[Close]

BLAST of CSPI06G08780 vs. TAIR10
Match: AT1G76580.1 (AT1G76580.1 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein)

HSP 1 Score: 120.2 bits (300), Expect = 1.7e-27
Identity = 58/89 (65.17%), Postives = 66/89 (74.16%), Query Frame = 1


Query: 72  GSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVITAGLTQRFCQQCSR 131
           GS  GG GN+  +CQ + C  DLS AK YHRRHKVCE HSKA+  +     QRFCQQCSR
Sbjct: 70  GSGGGGGGNYP-KCQVDNCKEDLSIAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSR 129

Query: 132 FHVVGEFDNGKRSCRKRLADHNRRRRKTQ 161
           FH++ EFD GKRSCR+RL  HNRRRRKTQ
Sbjct: 130 FHLLSEFDEGKRSCRRRLDGHNRRRRKTQ 157

[Close]

BLAST of CSPI06G08780 vs. NCBI nr
Match: gi|449445457|ref|XP_004140489.1| (PREDICTED: squamosa promoter-binding-like protein 8 [Cucumis sativus])

HSP 1 Score: 441.4 bits (1134), Expect = 9.2e-121
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1


Query: 1   MGASSSHHYNSVTGGGGEFMLVPKSENVCGSIGAAAPAEFAARIGLNLGGRTYFSSEEEE 60
           MGASSSHHYNSVTGGGGEFMLVPKSENVCGSIGAAAPAEFAARIGLNLGGRTYFSSEEEE
Sbjct: 77  MGASSSHHYNSVTGGGGEFMLVPKSENVCGSIGAAAPAEFAARIGLNLGGRTYFSSEEEE 136

Query: 61  FVNRLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVITAG 120
           FVNRLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVITAG
Sbjct: 137 FVNRLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVITAG 196

Query: 121 LTQRFCQQCSRFHVVGEFDNGKRSCRKRLADHNRRRRKTQQPHHQPTPNSSQLIQSTTSS 180
           LTQRFCQQCSRFHVVGEFDNGKRSCRKRLADHNRRRRKTQQPHHQPTPNSSQLIQSTTSS
Sbjct: 197 LTQRFCQQCSRFHVVGEFDNGKRSCRKRLADHNRRRRKTQQPHHQPTPNSSQLIQSTTSS 256

Query: 181 PTHSAATRSTMESTGQSTWSVTVAVSSPTRMSLDCLNQQPY 222
           PTHSAATRSTMESTGQSTWSVTVAVSSPTRMSLDCLNQQPY
Sbjct: 257 PTHSAATRSTMESTGQSTWSVTVAVSSPTRMSLDCLNQQPY 297

[Close]

BLAST of CSPI06G08780 vs. NCBI nr
Match: gi|659116546|ref|XP_008458127.1| (PREDICTED: squamosa promoter-binding-like protein 8 [Cucumis melo])

HSP 1 Score: 397.1 bits (1019), Expect = 2.0e-107
Identity = 202/221 (91.40%), Postives = 210/221 (95.02%), Query Frame = 1


Query: 1   MGASSSHHYNSVTGGGGEFMLVPKSENVCGSIGAAAPAEFAARIGLNLGGRTYFSSEEEE 60
           MG SS HHYNSVTGGGGEFMLVPKSE+VCGS+  AAP EFAARIGLNLGGRTYFSSEEEE
Sbjct: 80  MGTSSYHHYNSVTGGGGEFMLVPKSEDVCGSM--AAPVEFAARIGLNLGGRTYFSSEEEE 139

Query: 61  FVNRLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVITAG 120
           FVNRLYR+TR+GSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVITAG
Sbjct: 140 FVNRLYRKTRSGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVITAG 199

Query: 121 LTQRFCQQCSRFHVVGEFDNGKRSCRKRLADHNRRRRKTQQPHHQPTPNSSQLIQSTTSS 180
           LTQRFCQQCSRFHVVGEFDNGKRSCRKRLADHNRRRRKTQQ HHQ TPNSSQL+Q+T SS
Sbjct: 200 LTQRFCQQCSRFHVVGEFDNGKRSCRKRLADHNRRRRKTQQSHHQGTPNSSQLLQTTPSS 259

Query: 181 PTHSAATRSTMESTGQSTWSVTVAVSSPTRMSLDCLNQQPY 222
            THSAATRSTMESTGQS WSVTVAV SPTRMSLDCLNQ+P+
Sbjct: 260 STHSAATRSTMESTGQSAWSVTVAV-SPTRMSLDCLNQRPF 297

[Close]

BLAST of CSPI06G08780 vs. NCBI nr
Match: gi|378556261|gb|AFC17960.1| (squamosa promoter binding protein-like 8 [Betula platyphylla])

HSP 1 Score: 243.0 bits (619), Expect = 4.8e-61
Identity = 136/218 (62.39%), Postives = 158/218 (72.48%), Query Frame = 1


Query: 4   SSSHHYNSVTGGGGEFMLVPKSENVCGSIGAAAPAEFAARIGLNLGGRTYFSSEEEEFVN 63
           S  H  N   G GG ++LVPKSE        +   +F +R+GLNLGGRTYFSS E+EFVN
Sbjct: 91  SLDHPVNGAAGSGGGYLLVPKSEEA-----VSRSVDFVSRLGLNLGGRTYFSSAEDEFVN 150

Query: 64  RLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVITAGLTQ 123
           RLYRR+R      GS N + RCQAEGCNADL+ AKHYHRRHKVCEFHSKASTVI AGLTQ
Sbjct: 151 RLYRRSRPTEP--GSAN-SPRCQAEGCNADLTHAKHYHRRHKVCEFHSKASTVIAAGLTQ 210

Query: 124 RFCQQCSRFHVVGEFDNGKRSCRKRLADHNRRRRKTQQPHHQPTPNSSQLIQSTTSSPTH 183
           RFCQQCSRFH++ EFDNGKRSCRKRLADHNRRRRKT    HQP P   + ++S   +  +
Sbjct: 211 RFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKT----HQPNP---EQLKSQPDNARN 270

Query: 184 SAATRSTMESTGQSTWSVTVAVSSPTRMSLDCLNQQPY 222
            ++ RS  +S   ST SVTVAV SP RMSLDC  Q+P+
Sbjct: 271 PSSERSPPDSGAHSTSSVTVAV-SPPRMSLDCFRQRPF 292

[Close]

BLAST of CSPI06G08780 vs. NCBI nr
Match: gi|596004986|ref|XP_007218335.1| (hypothetical protein PRUPE_ppa008560mg [Prunus persica])

HSP 1 Score: 238.0 bits (606), Expect = 1.5e-59
Identity = 140/226 (61.95%), Postives = 165/226 (73.01%), Query Frame = 1


Query: 3   ASSSHH----YNSVTGGGGE-FMLVPKSENVCGSIGAAAPAEFAARIGLNLGGRTYFSSE 62
           A  +HH     + + GG     +LVPKSE++C       P +FA+RIGLNLGGRTYFSSE
Sbjct: 95  APPNHHPLLSLDPIQGGAAHGLILVPKSEDLC------RPVDFASRIGLNLGGRTYFSSE 154

Query: 63  EEEFVNRLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVI 122
           ++ F+NRLYRRTR  +E G   N A RCQAEGC ADLS AKHYHRRHKVCEFHSKASTVI
Sbjct: 155 DD-FMNRLYRRTRPATETGS--NHAPRCQAEGCTADLSHAKHYHRRHKVCEFHSKASTVI 214

Query: 123 TAGLTQRFCQQCSRFHVVGEFDNGKRSCRKRLADHNRRRRKTQQPHHQPTPNS--SQLIQ 182
             GLTQRFCQQCSRFH++ EFDNGKRSCR+RLADHNRRRRKTQQ  +Q   NS   QL++
Sbjct: 215 ANGLTQRFCQQCSRFHLLPEFDNGKRSCRRRLADHNRRRRKTQQT-NQENHNSQVQQLVE 274

Query: 183 STTSSPTHSAATRSTMESTGQSTWSVTVAVSSPTRMSLDCLNQQPY 222
           +  +S + + A RS  ES   S  SVTVA+ SP RM+LDC  Q+PY
Sbjct: 275 NARNSSSDNVA-RSPPESAAHSASSVTVAL-SPPRMTLDCFRQRPY 308

[Close]

BLAST of CSPI06G08780 vs. NCBI nr
Match: gi|703072335|ref|XP_010089258.1| (Squamosa promoter-binding-like protein 8 [Morus notabilis])

HSP 1 Score: 236.5 bits (602), Expect = 4.5e-59
Identity = 136/211 (64.45%), Postives = 155/211 (73.46%), Query Frame = 1


Query: 14  GGGG---EFMLVPKSENVCGSIGAAAPAEFAARIGLNLGGRTYFSSEEEEFVNRLYRRTR 73
           GGGG    FMLVPKSE+        A  +F++RIGLNLGGRTYFSSE++ F++RLYRR R
Sbjct: 145 GGGGLGVPFMLVPKSED-----HQRAAVDFSSRIGLNLGGRTYFSSEDD-FMSRLYRRPR 204

Query: 74  TGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVITAGLTQRFCQQCS 133
              E G +   + RCQAEGCNADLS AKHYHRRHKVCEFHSKASTV+ AGLTQRFCQQCS
Sbjct: 205 A-LEAGSTSANSPRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLTQRFCQQCS 264

Query: 134 RFHVVGEFDNGKRSCRKRLADHNRRRRKTQQPHHQPTPNSSQLIQSTTSSPTHSAATRST 193
           RFH++ EFDNGKRSCRKRLADHNRRRRKTQQP+ Q   N   L      +P+     RS 
Sbjct: 265 RFHLLSEFDNGKRSCRKRLADHNRRRRKTQQPNQQ-VQNPKSLQPENAQNPSSDNVARSP 324

Query: 194 MESTGQSTWSVTVAVSSPTRMSLDCLNQQPY 222
            +S  QS+ SVTVAV SP RMSLDC  Q+ Y
Sbjct: 325 PDSGAQSSSSVTVAV-SPPRMSLDCFRQRSY 346

The following BLAST results are available for this feature:

BLAST of CSPI06G08780 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SPL8_ARATH	1.8e-47	51.66	Squamosa promoter-binding-like protein 8 OS=Arabidopsis thaliana GN=SPL8 PE=1 SV...	[more]
SPL10_ORYSJ	1.2e-35	48.92	Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. japonica GN=SPL...	[more]
SPL10_ORYSI	1.2e-35	48.92	Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. indica GN=SPL10...	[more]
SPL5_ORYSJ	1.7e-34	49.52	Squamosa promoter-binding-like protein 5 OS=Oryza sativa subsp. japonica GN=SPL5...	[more]
LG1_MAIZE	1.7e-29	50.00	Protein LIGULELESS 1 OS=Zea mays GN=LG1 PE=2 SV=1	[more]

BLAST of CSPI06G08780 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KA35_CUCSA	6.4e-121	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G109120 PE=4 SV=1	[more]
H9CNK3_BETPL	3.3e-61	62.39	Squamosa promoter binding protein-like 8 OS=Betula platyphylla GN=SPL8 PE=2 SV=1	[more]
M5X0V7_PRUPE	1.1e-59	61.95	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008560mg PE=4 SV=1	[more]
A0A0B0N0S5_GOSAR	3.1e-59	61.97	Squamosa promoter-binding-like protein 8 OS=Gossypium arboreum GN=F383_34958 PE=...	[more]
A0A022QTE2_ERYGU	3.1e-59	65.55	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a009702mg PE=4 SV=1	[more]

BLAST of CSPI06G08780 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G02065.1	9.9e-49	51.66	squamosa promoter binding protein-like 8	[more]
AT3G60030.1	1.4e-29	55.08	squamosa promoter-binding protein-like 12	[more]
AT1G20980.1	7.4e-28	55.37	squamosa promoter binding protein-like 14	[more]
AT2G47070.1	1.7e-27	70.67	squamosa promoter binding protein-like 1	[more]
AT1G76580.1	1.7e-27	65.17	Squamosa promoter-binding protein-like (SBP domain) transcription fa...	[more]

BLAST of CSPI06G08780 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445457\|ref\|XP_004140489.1\|	9.2e-121	100.00	PREDICTED: squamosa promoter-binding-like protein 8 [Cucumis sativus]	[more]
gi\|659116546\|ref\|XP_008458127.1\|	2.0e-107	91.40	PREDICTED: squamosa promoter-binding-like protein 8 [Cucumis melo]	[more]
gi\|378556261\|gb\|AFC17960.1\|	4.8e-61	62.39	squamosa promoter binding protein-like 8 [Betula platyphylla]	[more]
gi\|596004986\|ref\|XP_007218335.1\|	1.5e-59	61.95	hypothetical protein PRUPE_ppa008560mg [Prunus persica]	[more]
gi\|703072335\|ref\|XP_010089258.1\|	4.5e-59	64.45	Squamosa promoter-binding-like protein 8 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004333	SBP_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048856	anatomical structure development
biological_process	GO:0003006	developmental process involved in reproduction
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0044702	single organism reproductive process
biological_process	GO:0008150	biological_process
biological_process	GO:0048229	gametophyte development
biological_process	GO:0048236	plant-type spore development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G08780.1	CSPI06G08780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004333	Transcription factor, SBP-box	GENE3D	G3DSA:4.10.1100.10		coord: 79..146 score: 1.6
IPR004333	Transcription factor, SBP-box	PFAM	PF03110	SBP	coord: 85..158 score: 6.5
IPR004333	Transcription factor, SBP-box	PROFILE	PS51141	ZF_SBP	coord: 82..159 score: 31
IPR004333	Transcription factor, SBP-box	unknown	SSF103612	SBT domain	coord: 83..162 score: 8.44
None	No IPR available	PANTHER	PTHR31251	FAMILY NOT NAMED	coord: 41..221 score: 2.4
None	No IPR available	PANTHER	PTHR31251:SF4	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 8	coord: 41..221 score: 2.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G08780	Cla006667	Watermelon (97103) v1	cpiwmB563
CSPI06G08780	Csa6G109120	Cucumber (Chinese Long) v2	cpicuB314
CSPI06G08780	MELO3C021144	Melon (DHL92) v3.5.1	cpimeB436
CSPI06G08780	ClCG06G003030	Watermelon (Charleston Gray)	cpiwcgB503
CSPI06G08780	Lsi09G016300	Bottle gourd (USVL1VR-Ls)	cpilsiB404
CSPI06G08780	MELO3C021144.2	Melon (DHL92) v3.6.1	cpimedB435
CSPI06G08780	CsaV3_6G009140	Cucumber (Chinese Long) v3	cpicucB364
CSPI06G08780	Cla97C06G112420	Watermelon (97103) v2	cpiwmbB495
CSPI06G08780	Bhi12G001910	Wax gourd	cpiwgoB549
CSPI06G08780	Cucsa.120620	Cucumber (Gy14) v1	cgycpiB156
CSPI06G08780	CmaCh08G008640	Cucurbita maxima (Rimu)	cmacpiB918
CSPI06G08780	CmoCh08G008330	Cucurbita moschata (Rifu)	cmocpiB898
CSPI06G08780	CsGy6G008870	Cucumber (Gy14) v2	cgybcpiB288

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI06G08780	Silver-seed gourd	carcpiB0593
CSPI06G08780	Silver-seed gourd	carcpiB0637
CSPI06G08780	Cucurbita maxima (Rimu)	cmacpiB383
CSPI06G08780	Cucurbita moschata (Rifu)	cmocpiB372
CSPI06G08780	Cucurbita pepo (Zucchini)	cpecpiB154
CSPI06G08780	Cucurbita pepo (Zucchini)	cpecpiB329