LsiUNG000330 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATGGGGGAAATGATAATTAGAATAAAAATAATGTGGGAGGGAATGGAATAGAAAAATATGCGATAAGACCGAAGCAAAGAAGAAAATGAAAGGAAATTTATAAAGGAAAGAAGGAGAAGAGTTCCTTGTAGCCAACGCATCTTTTCTCATTTGCTTCGGCTTCGAACCTTTTTGCTTCGGTTTAGACTTTTTGCAGATAAGAACGACTTCTCTCTCTCCGTCTTCTTCCCCCAATTTCTCCTCTCTTACAAGAATCCCTTCCCCTTTCCTTTCGCCGCCCTTACTCAATAACCCCCCCTCTCTCTTCTGTTCTACTCTCTCTTCCTCCTTCAATCTGGCTATCGAAGAAATCTACCCCAAGAATCGAACAATCATGGTATGGTAAATCATTTTCTGGGTTCTTCTCTAAATCTCTAACCATTCATTCTCAATCCCTTTTTTTGATGGGTTTTTCTTTTCTTCTTAAAAACAGGGTGTTGGTTGTCCTGAGGATGAAGATAACAGATGGCCGCCATGGCTTAAACCTTTACTTCGTGAAACCTTCTTTGTTCAATGCAAGTTTCATGCCGATTCTCACAAGAGTGAATGTAATATGTATTGTTTGGATTGCATGAATGGCGCTCTCTGTTCTCTCTGTCTCGCTTTTCATAAAGACCATCGCGCTATTCAGGTTAATTTCTGTCCTCATTCCCAAAAACAGGGGTTGCGGTTGCTCTGTTTCTTTTTTTCCCCTCTCTAATTCCGCCTCTGTTTTTATACAGATTAGAAGATCTTCATATCATGATGTGATAAGGGTATCTGAGATTCAGAAAGTTCTTGACATAACCGGCGTTCAAACCTACATTATCAACAGCGCAAGAGTCGTCTTCTTGAATGAACGGCCACAACCTAGGCCTGGGAAAGGCGTAACAAACACCTGTGAAGTTTGTGAACGCAGTCTCCTTGATTCCTTCCGATTCTGTTCTCTTGGCTGTAAGGTAAAAAAAAAGAGAAACCAGTCTCTTGCAATTTTCTTATCAATGTGGAAGAATTTGGAGAAATTAAATTGTGGGTTTTCTGTGGTTTTAGATTGTGGGAACATCGAAGAATTTCGAGAAGAAACGGCGAGTGATGGGATCGGATTCAGAGGATTCATCGTACAGTAGTAATAGTAGCCAAGGGAGAATAATGAAGAACAACAATAAGAACAGAGTTGTGCAGAGTTTCACACCGTCAACGCCACCCCCAACTTTGGTCAGTTACAGAACAGCCAAGCGAAGAAAGGGGATTCCACACAGAGCTCCAATGGGAGGACTCATTATCGAATATTGAAAAAAAAAAAAAGAAAAAAAAAACCTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT AAATGGGGGAAATGATAATTAGAATAAAAATAATGTGGGAGGGAATGGAATAGAAAAATATGCGATAAGACCGAAGCAAAGAAGAAAATGAAAGGAAATTTATAAAGGAAAGAAGGAGAAGAGTTCCTTGTAGCCAACGCATCTTTTCTCATTTGCTTCGGCTTCGAACCTTTTTGCTTCGGTTTAGACTTTTTGCAGATAAGAACGACTTCTCTCTCTCCGTCTTCTTCCCCCAATTTCTCCTCTCTTACAAGAATCCCTTCCCCTTTCCTTTCGCCGCCCTTACTCAATAACCCCCCCTCTCTCTTCTGTTCTACTCTCTCTTCCTCCTTCAATCTGGCTATCGAAGAAATCTACCCCAAGAATCGAACAATCATGGGTGTTGGTTGTCCTGAGGATGAAGATAACAGATGGCCGCCATGGCTTAAACCTTTACTTCGTGAAACCTTCTTTGTTCAATGCAAGTTTCATGCCGATTCTCACAAGAGTGAATGTAATATGTATTGTTTGGATTGCATGAATGGCGCTCTCTGTTCTCTCTGTCTCGCTTTTCATAAAGACCATCGCGCTATTCAGATTAGAAGATCTTCATATCATGATGTGATAAGGGTATCTGAGATTCAGAAAGTTCTTGACATAACCGGCGTTCAAACCTACATTATCAACAGCGCAAGAGTCGTCTTCTTGAATGAACGGCCACAACCTAGGCCTGGGAAAGGCGTAACAAACACCTGTGAAGTTTGTGAACGCAGTCTCCTTGATTCCTTCCGATTCTGTTCTCTTGGCTGTAAGGTAAAAAAAAAGAGAAACCAGTCTCTTGCAATTTTCTTATCAATGTGGAAGAATTTGGAGAAATTAAATTGTGGGTTTTCTGTGATTGTGGGAACATCGAAGAATTTCGAGAAGAAACGGCGAGTGATGGGATCGGATTCAGAGGATTCATCGTACAGTAGTAATAGTAGCCAAGGGAGAATAATGAAGAACAACAATAAGAACAGAGTTGTGCAGAGTTTCACACCGTCAACGCCACCCCCAACTTTGGTCAGTTACAGAACAGCCAAGCGAAGAAAGGGGATTCCACACAGAGCTCCAATGGGAGGACTCATTATCGAATATTGAAAAAAAAAAAAAGAAAAAAAAAACCTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT ATGGGTGTTGGTTGTCCTGAGGATGAAGATAACAGATGGCCGCCATGGCTTAAACCTTTACTTCGTGAAACCTTCTTTGTTCAATGCAAGTTTCATGCCGATTCTCACAAGAGTGAATGTAATATGTATTGTTTGGATTGCATGAATGGCGCTCTCTGTTCTCTCTGTCTCGCTTTTCATAAAGACCATCGCGCTATTCAGATTAGAAGATCTTCATATCATGATGTGATAAGGGTATCTGAGATTCAGAAAGTTCTTGACATAACCGGCGTTCAAACCTACATTATCAACAGCGCAAGAGTCGTCTTCTTGAATGAACGGCCACAACCTAGGCCTGGGAAAGGCGTAACAAACACCTGTGAAGTTTGTGAACGCAGTCTCCTTGATTCCTTCCGATTCTGTTCTCTTGGCTGTAAGGTAAAAAAAAAGAGAAACCAGTCTCTTGCAATTTTCTTATCAATGTGGAAGAATTTGGAGAAATTAAATTGTGGGTTTTCTGTGATTGTGGGAACATCGAAGAATTTCGAGAAGAAACGGCGAGTGATGGGATCGGATTCAGAGGATTCATCGTACAGTAGTAATAGTAGCCAAGGGAGAATAATGAAGAACAACAATAAGAACAGAGTTGTGCAGAGTTTCACACCGTCAACGCCACCCCCAACTTTGGTCAGTTACAGAACAGCCAAGCGAAGAAAGGGGATTCCACACAGAGCTCCAATGGGAGGACTCATTATCGAATATTGA MGVGCPEDEDNRWPPWLKPLLRETFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFHKDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKVKKKRNQSLAIFLSMWKNLEKLNCGFSVIVGTSKNFEKKRRVMGSDSEDSSYSSNSSQGRIMKNNNKNRVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY
BLAST of LsiUNG000330 vs. TrEMBL
Match: A0A0L9TND1_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g151200 PE=4 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 5.7e-102 Identity = 192/249 (77.11%), Postives = 205/249 (82.33%), Query Frame = 1
BLAST of LsiUNG000330 vs. TrEMBL
Match: B9GZ85_POPTR (Zinc-binding family protein OS=Populus trichocarpa GN=POPTR_0003s09160g PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 3.7e-101 Identity = 188/250 (75.20%), Postives = 202/250 (80.80%), Query Frame = 1
BLAST of LsiUNG000330 vs. TrEMBL
Match: B9MU31_POPTR (Zinc-binding family protein OS=Populus trichocarpa GN=POPTR_0001s02390g PE=4 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 4.8e-101 Identity = 191/252 (75.79%), Postives = 202/252 (80.16%), Query Frame = 1
BLAST of LsiUNG000330 vs. TrEMBL
Match: V7CE01_PHAVU (Uncharacterized protein (Fragment) OS=Phaseolus vulgaris GN=PHAVU_003G2848001g PE=4 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 8.2e-101 Identity = 190/249 (76.31%), Postives = 203/249 (81.53%), Query Frame = 1
BLAST of LsiUNG000330 vs. TrEMBL
Match: A9PIS3_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 8.2e-101 Identity = 190/252 (75.40%), Postives = 202/252 (80.16%), Query Frame = 1
BLAST of LsiUNG000330 vs. TAIR10
Match: AT1G32700.1 (AT1G32700.1 PLATZ transcription factor family protein) HSP 1 Score: 305.4 bits (781), Expect = 3.1e-83 Identity = 161/245 (65.71%), Postives = 179/245 (73.06%), Query Frame = 1
BLAST of LsiUNG000330 vs. TAIR10
Match: AT4G17900.1 (AT4G17900.1 PLATZ transcription factor family protein) HSP 1 Score: 299.7 bits (766), Expect = 1.7e-81 Identity = 156/243 (64.20%), Postives = 176/243 (72.43%), Query Frame = 1
BLAST of LsiUNG000330 vs. TAIR10
Match: AT1G21000.1 (AT1G21000.1 PLATZ transcription factor family protein) HSP 1 Score: 234.2 bits (596), Expect = 8.7e-62 Identity = 122/239 (51.05%), Postives = 154/239 (64.44%), Query Frame = 1
BLAST of LsiUNG000330 vs. TAIR10
Match: AT1G76590.1 (AT1G76590.1 PLATZ transcription factor family protein) HSP 1 Score: 223.4 bits (568), Expect = 1.5e-58 Identity = 123/252 (48.81%), Postives = 155/252 (61.51%), Query Frame = 1
BLAST of LsiUNG000330 vs. TAIR10
Match: AT5G46710.1 (AT5G46710.1 PLATZ transcription factor family protein) HSP 1 Score: 207.6 bits (527), Expect = 8.7e-54 Identity = 118/236 (50.00%), Postives = 146/236 (61.86%), Query Frame = 1
BLAST of LsiUNG000330 vs. NCBI nr
Match: gi|449436818|ref|XP_004136189.1| (PREDICTED: uncharacterized protein LOC101209912 [Cucumis sativus]) HSP 1 Score: 425.6 bits (1093), Expect = 5.8e-116 Identity = 211/244 (86.48%), Postives = 214/244 (87.70%), Query Frame = 1
BLAST of LsiUNG000330 vs. NCBI nr
Match: gi|950935786|ref|XP_014517396.1| (PREDICTED: uncharacterized protein LOC106774881 [Vigna radiata var. radiata]) HSP 1 Score: 378.6 bits (971), Expect = 8.1e-102 Identity = 192/249 (77.11%), Postives = 205/249 (82.33%), Query Frame = 1
BLAST of LsiUNG000330 vs. NCBI nr
Match: gi|920687973|gb|KOM31956.1| (hypothetical protein LR48_Vigan01g151200 [Vigna angularis]) HSP 1 Score: 378.6 bits (971), Expect = 8.1e-102 Identity = 192/249 (77.11%), Postives = 205/249 (82.33%), Query Frame = 1
BLAST of LsiUNG000330 vs. NCBI nr
Match: gi|743809683|ref|XP_011018554.1| (PREDICTED: uncharacterized protein LOC105121563 [Populus euphratica]) HSP 1 Score: 376.3 bits (965), Expect = 4.0e-101 Identity = 193/253 (76.28%), Postives = 205/253 (81.03%), Query Frame = 1
BLAST of LsiUNG000330 vs. NCBI nr
Match: gi|224071363|ref|XP_002303423.1| (zinc-binding family protein [Populus trichocarpa]) HSP 1 Score: 375.9 bits (964), Expect = 5.3e-101 Identity = 188/250 (75.20%), Postives = 202/250 (80.80%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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