Cp4.1LG15g02100 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG15g02100
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPLATZ transcription factor family protein
LocationCp4.1LG15 : 1720591 .. 1722304 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAGACCAAAGCAAAGAAGAAAATGAAAGCAAATTTATAAAGGAAAGAAGGAGAAGAGTTCCTTATGGCCAACGCATCTTTCCCCTTTTGCTTCGGCTTGGACTTTTTTCGCAGATAAGAACCACTTCCCTCTCTCCCTTCCATTCTCTAAAATCACGAACACTGTTCTTCTTCGTCATTCAATCGACCCCAAGAACAGAAGAATCATGGTATGATTTTGGGTTTATGTTCTTTTCTCAATCTGGGTTTCTTTGTATTTCAATGGCGGATTCTGTTAAAACAGGGCGCTGGAGTTCTTGAGGAGGAAGATAACCGATGGCCGCCATGGCTGAAACCTTTGCTCCGTGAAAGCTTCTTCGTTCAATGCAAGTTTCATGCCGATTCCCATAAGAGTGAATGTAATATGTATTGTTTGGATTGTATGAACGGCGCTCTCTGTTCTCTCTGCCTCGCTTATCACAAAGATCATCGCGCCATTCAGGTTCGTTTCGAAACTCTAAATTTCGCTTTCTGGGTAAGAACTCGTGCGATTTCCCCTCAAGAACACTCATAACAAACCCATTACTCCTCTAATTTAGATTACGAAAACTGGGTTTTCTGGGTTTGCTCTGTTTGCTCTGTTTGCTCTGTTTTATGATTCCGGCTCTGTTTTATCACAAAGATCATCACGCCATTCAGGTTCGTTTAGAAACTATAAATTTAGCTTTATGGGAAATAACTTGTGGGATTTCCCCTTCAAGAACAATCATAACCCCATTACAATTTAGATTACGAACTGGGTTTTCTGGGTTTGCTCTGTTTTTATGATTCTGGCTCTGTTTTGGCGCAGATTAGGAGGTCATCGTACCACGATGTCATAAGGGTATCAGAGATTCAGAAAGTTCTCGACATTACCGGCGTTCAAACCTACATTATCAACAGCGCGCGGGTCGTGTTCTTGAACGAACGGCCACAGCCAAGGCCAGGCAAAGGCGTGACGAACACCTGTGAGGTCTGCGAGCGCAGCCTTCTCGATTCTTTCCGATTCTGCTCTCTGGGTTGCAAGGTAAACTTAGTTTCATATCAATGCCTTGTTGTTGAGATAGCGTTGATTTCGAGAAATTGATATCTGGGTTTCTTCCAGATTGTGGGAATATCGAAGAAATTCGTGAAGAAACGGCCGGCAATGGGATCAGATTCAGAGGATTCTTCGTCGTACAGCAGCAGCAGAAACAAGAACAGAGTGGTGCTGCAGAGCTTCACGCCATCAACGCCACCACCAACTTTGGTTAGTTACAGAACGGCCAAACGAAGAAAAGGGATTCCACACAGAGCGCCAATGGGTGGACTCATAATCGAATATTGAAAAAAAAAAAAAAAGCCTTTTTTCTGTTCATATAAATTTTTAATTTTGAATTACATAAAAACATGTAAATACAGGGGTGGAAAAGGAAACAAACAGGAAGAATGGGGAAAATGTGCAAATACAGCAAAGATGGTGGGCATGGGAGCAATAAACAATGTATAGATGGTATAATTATACGTGAGTTTTGGGGTTATAGATGTAAATACTGTTTTTTTCTTCCTTGGTTTGTAATTTAGGAATGTTTATACAAGGAATGAAATAAAAAATAAAAAATAAAAAAATTTGTAAATTATTAATTTTTATTTTCATTTTCATATAAAGGGGCGGACCGGGGTAGGACCGGTGGCGGGCGGTTCAGTGGGGAGGGTG

mRNA sequence

TAAGACCAAAGCAAAGAAGAAAATGAAAGCAAATTTATAAAGGAAAGAAGGAGAAGAGTTCCTTATGGCCAACGCATCTTTCCCCTTTTGCTTCGGCTTGGACTTTTTTCGCAGATAAGAACCACTTCCCTCTCTCCCTTCCATTCTCTAAAATCACGAACACTGTTCTTCTTCGTCATTCAATCGACCCCAAGAACAGAAGAATCATGGGCGCTGGAGTTCTTGAGGAGGAAGATAACCGATGGCCGCCATGGCTGAAACCTTTGCTCCGTGAAAGCTTCTTCGTTCAATGCAAGTTTCATGCCGATTCCCATAAGAGTGAATGTAATATGTATTGTTTGGATTGTATGAACGGCGCTCTCTGTTCTCTCTGCCTCGCTTATCACAAAGATCATCGCGCCATTCAGATTACGAAAACTGGGTTTTCTGGGTTTGCTCTGTTTGCTCTGTTTGCTCTGTTTTATGATTCCGGCTCTGTTTTATCACAAAGATCATCACGCCATTCAGATTACGAACTGGGTTTTCTGGGTTTGCTCTGTTTTTATGATTCTGGCTCTGTTTTGGCGCAGATTAGGAGGTCATCGTACCACGATGTCATAAGGGTATCAGAGATTCAGAAAGTTCTCGACATTACCGGCGTTCAAACCTACATTATCAACAGCGCGCGGGTCGTGTTCTTGAACGAACGGCCACAGCCAAGGCCAGGCAAAGGCGTGACGAACACCTGTGAGGTCTGCGAGCGCAGCCTTCTCGATTCTTTCCGATTCTGCTCTCTGGGTTGCAAGATTGTGGGAATATCGAAGAAATTCGTGAAGAAACGGCCGGCAATGGGATCAGATTCAGAGGATTCTTCGTCGTACAGCAGCAGCAGAAACAAGAACAGAGTGGTGCTGCAGAGCTTCACGCCATCAACGCCACCACCAACTTTGGTTAGTTACAGAACGGCCAAACGAAGAAAAGGGATTCCACACAGAGCGCCAATGGGTGGACTCATAATCGAATATTGAAAAAAAAAAAAAAAGCCTTTTTTCTGTTCATATAAATTTTTAATTTTGAATTACATAAAAACATGTAAATACAGGGGTGGAAAAGGAAACAAACAGGAAGAATGGGGAAAATGTGCAAATACAGCAAAGATGGTGGGCATGGGAGCAATAAACAATGTATAGATGGTATAATTATACGGGCGGACCGGGGTAGGACCGGTGGCGGGCGGTTCAGTGGGGAGGGTG

Coding sequence (CDS)

ATGGGCGCTGGAGTTCTTGAGGAGGAAGATAACCGATGGCCGCCATGGCTGAAACCTTTGCTCCGTGAAAGCTTCTTCGTTCAATGCAAGTTTCATGCCGATTCCCATAAGAGTGAATGTAATATGTATTGTTTGGATTGTATGAACGGCGCTCTCTGTTCTCTCTGCCTCGCTTATCACAAAGATCATCGCGCCATTCAGATTACGAAAACTGGGTTTTCTGGGTTTGCTCTGTTTGCTCTGTTTGCTCTGTTTTATGATTCCGGCTCTGTTTTATCACAAAGATCATCACGCCATTCAGATTACGAACTGGGTTTTCTGGGTTTGCTCTGTTTTTATGATTCTGGCTCTGTTTTGGCGCAGATTAGGAGGTCATCGTACCACGATGTCATAAGGGTATCAGAGATTCAGAAAGTTCTCGACATTACCGGCGTTCAAACCTACATTATCAACAGCGCGCGGGTCGTGTTCTTGAACGAACGGCCACAGCCAAGGCCAGGCAAAGGCGTGACGAACACCTGTGAGGTCTGCGAGCGCAGCCTTCTCGATTCTTTCCGATTCTGCTCTCTGGGTTGCAAGATTGTGGGAATATCGAAGAAATTCGTGAAGAAACGGCCGGCAATGGGATCAGATTCAGAGGATTCTTCGTCGTACAGCAGCAGCAGAAACAAGAACAGAGTGGTGCTGCAGAGCTTCACGCCATCAACGCCACCACCAACTTTGGTTAGTTACAGAACGGCCAAACGAAGAAAAGGGATTCCACACAGAGCGCCAATGGGTGGACTCATAATCGAATATTGA

Protein sequence

MGAGVLEEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAIQITKTGFSGFALFALFALFYDSGSVLSQRSSRHSDYELGFLGLLCFYDSGSVLAQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGISKKFVKKRPAMGSDSEDSSSYSSSRNKNRVVLQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY
Homology
[Close]
BLAST of Cp4.1LG15g02100 vs. TrEMBL
Match: A0A103XJ61_CYNCS (Uncharacterized protein (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_006243 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 2.0e-89
Identity = 177/278 (63.67%), Postives = 195/278 (70.14%), Query Frame = 1 

Query: 1   MGAGVLEEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60
           MGAG  +EEDN+WPPWLKPLLRE FFVQCK HADSHKSECNMYCLDCMNG LCSLCL +H
Sbjct: 55  MGAGGPDEEDNKWPPWLKPLLRERFFVQCKLHADSHKSECNMYCLDCMNGPLCSLCLNHH 114

Query: 61  KDHRAIQITKTGFSGFALFALFALFYDSGSVLSQRSSRHSDYELGFLGLLCFYDSGSVLA 120
           KDHRAIQ+        A+ + F  F   GS     S  H ++E                 
Sbjct: 115 KDHRAIQVY---IPLSAIDSSFLFFNFIGSDCFHLSLNHFEFETF--------------- 174

Query: 121 QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 180
               SSYHDVIRVSEIQK LDI+ VQTY+INSA+VVFLNERPQPRPGKGVTNTC+VCER+
Sbjct: 175 ---ESSYHDVIRVSEIQKHLDISSVQTYVINSAKVVFLNERPQPRPGKGVTNTCQVCERN 234

Query: 181 LLDSFRFCSLGCKIVGISKKFVKKRPAMG---------SDSED---SSSYSSSRNKNRVV 240
           LLDSFRFCSLGCKI G SK F +KR             SDSED   SSS+   R+   V 
Sbjct: 235 LLDSFRFCSLGCKIAGTSKNFQRKRKISPENKHLMTGMSDSEDSYSSSSHGRRRSSYNVR 294

Query: 241 LQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 267
           + SFTPSTPPPT  S+RTAKRRKGIPHRAPMGGL IEY
Sbjct: 295 VHSFTPSTPPPTAASFRTAKRRKGIPHRAPMGGLFIEY 311

[Close]
BLAST of Cp4.1LG15g02100 vs. TrEMBL
Match: A0A0E0CU90_9ORYZ (Uncharacterized protein OS=Oryza meridionalis PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.1e-79
Identity = 170/298 (57.05%), Postives = 195/298 (65.44%), Query Frame = 1 

Query: 2   GAGVLEEE--DNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAY 61
           G G  EEE  + RWPPWLKPLL  SFFVQC+ HAD+HKSECNMYCLDCMNGALCSLCL++
Sbjct: 19  GRGYEEEEVENQRWPPWLKPLLSTSFFVQCRIHADAHKSECNMYCLDCMNGALCSLCLSH 78

Query: 62  HKDHRAIQITKTGFSGFALFALFALFYDSGSVLSQRSSRHSDYELGFLGLLCFYDSGSVL 121
           H+DH AIQI ++ +      +      D   +   ++   +   + FL        G  +
Sbjct: 79  HRDHHAIQIRRSSYHDVIRVSEIQKVLD---ITGVQTYIINSARVVFLNERPQPRPGKGV 138

Query: 122 AQ----IRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCE 181
                   RS YHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCE
Sbjct: 139 TNTCEVCERSLYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCE 198

Query: 182 VCERSLLDSFRFCSLGCKIVGIS----------------------KKFVKKRPAMGS--- 241
           VCERSLLDSFRFCSLGCKIVG S                       K  KKR A+     
Sbjct: 199 VCERSLLDSFRFCSLGCKIVGTSGGYRPRKKHGGCGGGGGGGGDGGKRKKKRAALKDARY 258

Query: 242 DSEDS-SSYSSSRNKNRVVLQSFTPSTPPPTLVSYRTA-KRRKGIPHRAPMGGLIIEY 267
           +SEDS +S S   +    V+QSFTPSTPPPT  SYRT  KRRKG+PHR+P G LI+E+
Sbjct: 259 ESEDSCTSTSGGSSDKSSVVQSFTPSTPPPTSASYRTGNKRRKGVPHRSPFGSLIVEF 313

[Close]
BLAST of Cp4.1LG15g02100 vs. TrEMBL
Match: K4CN46_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 2.0e-65
Identity = 153/282 (54.26%), Postives = 169/282 (59.93%), Query Frame = 1 

Query: 1   MGAGVLEEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60
           MGAG  +EEDNRWPPWLKPLL+E FFV                         C L +  H
Sbjct: 1   MGAGGPDEEDNRWPPWLKPLLKERFFV------------------------QCKLHVDSH 60

Query: 61  KDHRAIQITKTGFSGFALFALFALFYDSGSVLSQRSSRHSDYELGFLGLLCFYDSGSVLA 120
           K                   ++ L    G++ S   S H D+                  
Sbjct: 61  KSE---------------CNMYCLDCMDGALCSICLSHHKDHRA---------------I 120

Query: 121 QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 180
           QIRRSSYHDVIRV+EIQK LDIT VQTYIINSA+VVFLNERPQPRPGKGVTNTCEVCERS
Sbjct: 121 QIRRSSYHDVIRVNEIQKFLDITSVQTYIINSAKVVFLNERPQPRPGKGVTNTCEVCERS 180

Query: 181 LLDSFRFCSLGCKIVGISKKFVKK----------RPAMGS---DSEDSSSYSSSRNKNRV 240
           LLDSFRFCSLGCKIVG SK FVK+           PA  +   DSEDS S SS   +N  
Sbjct: 181 LLDSFRFCSLGCKIVGTSKNFVKRPKQSPEKKKSSPAAAAAVYDSEDSYSSSSHGRQNST 228

Query: 241 ---VLQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 267
              V QSF+PSTPPPT V+YRTAKRRKGIPHRAPMGGL+I Y
Sbjct: 241 SNKVHQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVIGY 228

[Close]
BLAST of Cp4.1LG15g02100 vs. TrEMBL
Match: A0A103XGG2_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_007799 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 4.6e-65
Identity = 151/275 (54.91%), Postives = 168/275 (61.09%), Query Frame = 1 

Query: 1   MGAGVLEEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60
           MG G   EE+N+WPPWLKPLLRESFFV           +C +                 H
Sbjct: 1   MGVGGPVEEENKWPPWLKPLLRESFFV-----------QCKL-----------------H 60

Query: 61  KDHRAIQITKTGFSGFALFALFALFYDSGSVLSQRSSRHSDYELGFLGLLCFYDSGSVLA 120
            D    +             ++ L   +G + S   +RH D+                  
Sbjct: 61  ADSHKSECN-----------MYCLDCINGPLCSLCLNRHEDHRA---------------I 120

Query: 121 QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 180
           QIRRSSYHDVIRVSEIQK LDI+ VQTYIINSA+VVFLNERPQPRPGKGVTNTCEVCERS
Sbjct: 121 QIRRSSYHDVIRVSEIQKFLDISSVQTYIINSAKVVFLNERPQPRPGKGVTNTCEVCERS 180

Query: 181 LLDSFRFCSLGCKIVGISKKF--------VKKRPAMG-SDSEDS-SSYSSSRNKNRVVLQ 240
           LLDSFRFCSLGCKIVG SK F         KK   M  SDSEDS SS +  R +N   +Q
Sbjct: 181 LLDSFRFCSLGCKIVGTSKNFERTMKISPEKKHLIMAVSDSEDSYSSGNHLRQRNNTRIQ 221

Query: 241 SFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIE 266
           SFTPSTPPPT  S+RTAKRRKGIPHRAPMGGLIIE
Sbjct: 241 SFTPSTPPPTAASFRTAKRRKGIPHRAPMGGLIIE 221

[Close]
BLAST of Cp4.1LG15g02100 vs. TrEMBL
Match: W9QMH4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003212 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 4.3e-63
Identity = 128/149 (85.91%), Postives = 132/149 (88.59%), Query Frame = 1 

Query: 121 QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 180
           QIRRSSYHDVIRVSEIQKVLDI+GVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS
Sbjct: 65  QIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 124

Query: 181 LLDSFRFCSLGCKIVGISKKFVKKR---PAMGSDSEDSSSYSSSRNKNRVVLQSFTPSTP 240
           LLDSFRFCSLGCKIVG SK F KKR     M SDSEDS S SSS  ++   LQSFTPSTP
Sbjct: 125 LLDSFRFCSLGCKIVGTSKNFQKKRKQMAVMASDSEDSYSSSSSHGRSSNKLQSFTPSTP 184

Query: 241 PPTLVSYRTAKRRKGIPHRAPMGGLIIEY 267
           PPT V+YRTAKRRKGIPHRAPMGGLIIEY
Sbjct: 185 PPTSVNYRTAKRRKGIPHRAPMGGLIIEY 213

[Close]
BLAST of Cp4.1LG15g02100 vs. TAIR10
Match: AT1G32700.1 (AT1G32700.1 PLATZ transcription factor family protein)

HSP 1 Score: 210.7 bits (535), Expect = 1.1e-54
Identity = 110/149 (73.83%), Postives = 122/149 (81.88%), Query Frame = 1 

Query: 121 QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 180
           QIRRSSYHDVIRVSEIQK LDITGVQTY+INSA+VVFLNERPQPRPGKGV NTCEVC RS
Sbjct: 65  QIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGKGVINTCEVCYRS 124

Query: 181 LLDSFRFCSLGCKIVGISKKFVKKRPAMGSDSEDSSSYSS---SRNKNRVVLQSFTPSTP 240
           L+DSFRFCSLGCKI GISKK  K+     SDS+DS S +S    +  + ++  SFTPSTP
Sbjct: 125 LVDSFRFCSLGCKISGISKKKRKEWTNNLSDSDDSYSSTSIGRLKKNDDIMNNSFTPSTP 184

Query: 241 PPTLVSYRTAKRRKGIPHRAPMGGLIIEY 267
           P + V+ R AKRRKGIPHRAP GGLIIEY
Sbjct: 185 PLSAVNRRIAKRRKGIPHRAPFGGLIIEY 213

[Close]
BLAST of Cp4.1LG15g02100 vs. TAIR10
Match: AT4G17900.1 (AT4G17900.1 PLATZ transcription factor family protein)

HSP 1 Score: 189.5 bits (480), Expect = 2.7e-48
Identity = 102/142 (71.83%), Postives = 115/142 (80.99%), Query Frame = 1 

Query: 121 QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 180
           QIRRSSYHDVIRV+EIQK LDI G+QTY+INSA+VVFLNERPQPRPGKGVTNTC+VC RS
Sbjct: 87  QIRRSSYHDVIRVNEIQKYLDIGGIQTYVINSAKVVFLNERPQPRPGKGVTNTCKVCYRS 146

Query: 181 LL-DSFRFCSLGCKIVGISKKFVKKRPAMGSDSEDSSSYSSSRNKNRVVLQSFTPSTPPP 240
           L+ DSFRFCSLGCKI G S+ F K R  +  ++EDSSS S +  KN   LQSF+PSTPP 
Sbjct: 147 LVDDSFRFCSLGCKIAGTSRGFEKGRENLLMETEDSSS-SIAIGKNITNLQSFSPSTPPL 206

Query: 241 TLVS-YRTAKRRKGIPHRAPMG 261
           T  S  R  KRRKGIPHR+PMG
Sbjct: 207 TTSSNCRIVKRRKGIPHRSPMG 227

[Close]
BLAST of Cp4.1LG15g02100 vs. TAIR10
Match: AT1G21000.1 (AT1G21000.1 PLATZ transcription factor family protein)

HSP 1 Score: 146.4 bits (368), Expect = 2.6e-35
Identity = 85/181 (46.96%), Postives = 107/181 (59.12%), Query Frame = 1 

Query: 119 LAQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCE 178
           + QIRRSSYH+V+RV+EIQK +DI  VQTYIINSA++VFLNERPQPR GKGVTNTCE+C 
Sbjct: 67  VVQIRRSSYHNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPRIGKGVTNTCEICC 126

Query: 179 RSLLDSFRFCSLGCKIVGI---------SKKFVKKRPAMGSDSEDSSSYSSSRNK----N 238
           RSLLDSFRFCSLGCK+ G+         S K    R  +G    D ++  +   K    N
Sbjct: 127 RSLLDSFRFCSLGCKLGGMRRGDLSLTFSLKGKHGREYLGGSESDEATTPTKMRKTNAFN 186

Query: 239 RVVLQS----------------------------FTPSTPPPTLVSYRTAKRRKGIPHRA 259
           R++                               F+P TPP  + ++R + RRKG+PHRA
Sbjct: 187 RLMSGLSISTVRFDDYGPNGDQRSSSSGDEGGFSFSPGTPP--IYNHRNSSRRKGVPHRA 245

[Close]
BLAST of Cp4.1LG15g02100 vs. TAIR10
Match: AT5G46710.1 (AT5G46710.1 PLATZ transcription factor family protein)

HSP 1 Score: 137.5 bits (345), Expect = 1.2e-32
Identity = 76/147 (51.70%), Postives = 98/147 (66.67%), Query Frame = 1 

Query: 121 QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 180
           QIR SSYH+V +V EIQK LDI+ +QTY+INS++V+FLNERPQ +PGKG TN C VC R 
Sbjct: 81  QIRISSYHNVTKVDEIQKYLDISSIQTYVINSSKVLFLNERPQSKPGKGFTNACMVCYRG 140

Query: 181 LLDS-FRFCSLGCKIVGISKKFVKKRPAMGSDSEDSSSYSSSRNKNRVV------LQSFT 240
           L ++ FRFCS+GCK+ G S  F K+     +DS++S++ S   N +         LQS +
Sbjct: 141 LAENCFRFCSIGCKVAGTSGVFQKRVKHTTNDSDNSNNSSGVENNSSGAENGNSNLQSLS 200

Query: 241 PSTP--PPTLVSYRTAKRRKGIPHRAP 259
           P TP  PP  +  R    RKGIPHRAP
Sbjct: 201 PPTPQFPPRSLRKRL---RKGIPHRAP 224

[Close]
BLAST of Cp4.1LG15g02100 vs. TAIR10
Match: AT1G76590.1 (AT1G76590.1 PLATZ transcription factor family protein)

HSP 1 Score: 136.3 bits (342), Expect = 2.7e-32
Identity = 63/79 (79.75%), Postives = 73/79 (92.41%), Query Frame = 1 

Query: 121 QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 180
           QIRRSSYH+V+RV+EIQK +DI+ VQTYIINSAR+VFLNERPQPR GKGVTNTCE+C RS
Sbjct: 71  QIRRSSYHNVVRVNEIQKYIDISCVQTYIINSARIVFLNERPQPRIGKGVTNTCEICCRS 130

Query: 181 LLDSFRFCSLGCKIVGISK 200
           LLDSFRFCSLGCK+ G+ +
Sbjct: 131 LLDSFRFCSLGCKLGGMKR 149

[Close]
BLAST of Cp4.1LG15g02100 vs. NCBI nr
Match: gi|976903964|gb|KVH91713.1| (Protein of unknown function DUF597, partial [Cynara cardunculus var. scolymus])

HSP 1 Score: 337.0 bits (863), Expect = 2.9e-89
Identity = 177/278 (63.67%), Postives = 195/278 (70.14%), Query Frame = 1 

Query: 1   MGAGVLEEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60
           MGAG  +EEDN+WPPWLKPLLRE FFVQCK HADSHKSECNMYCLDCMNG LCSLCL +H
Sbjct: 55  MGAGGPDEEDNKWPPWLKPLLRERFFVQCKLHADSHKSECNMYCLDCMNGPLCSLCLNHH 114

Query: 61  KDHRAIQITKTGFSGFALFALFALFYDSGSVLSQRSSRHSDYELGFLGLLCFYDSGSVLA 120
           KDHRAIQ+        A+ + F  F   GS     S  H ++E                 
Sbjct: 115 KDHRAIQVY---IPLSAIDSSFLFFNFIGSDCFHLSLNHFEFETF--------------- 174

Query: 121 QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 180
               SSYHDVIRVSEIQK LDI+ VQTY+INSA+VVFLNERPQPRPGKGVTNTC+VCER+
Sbjct: 175 ---ESSYHDVIRVSEIQKHLDISSVQTYVINSAKVVFLNERPQPRPGKGVTNTCQVCERN 234

Query: 181 LLDSFRFCSLGCKIVGISKKFVKKRPAMG---------SDSED---SSSYSSSRNKNRVV 240
           LLDSFRFCSLGCKI G SK F +KR             SDSED   SSS+   R+   V 
Sbjct: 235 LLDSFRFCSLGCKIAGTSKNFQRKRKISPENKHLMTGMSDSEDSYSSSSHGRRRSSYNVR 294

Query: 241 LQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 267
           + SFTPSTPPPT  S+RTAKRRKGIPHRAPMGGL IEY
Sbjct: 295 VHSFTPSTPPPTAASFRTAKRRKGIPHRAPMGGLFIEY 311

[Close]
BLAST of Cp4.1LG15g02100 vs. NCBI nr
Match: gi|449436818|ref|XP_004136189.1| (PREDICTED: uncharacterized protein LOC101209912 [Cucumis sativus])

HSP 1 Score: 258.5 bits (659), Expect = 1.3e-65
Identity = 135/154 (87.66%), Postives = 137/154 (88.96%), Query Frame = 1 

Query: 121 QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 180
           QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS
Sbjct: 68  QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 127

Query: 181 LLDSFRFCSLGCKIVGISKKFVKKRPAMGSDSEDSSSYSSS--------RNKNRVVLQSF 240
           LLDSFRFCSLGCKIVG SK + KKR  MGSDSEDSS  S+S         NKNRVV QSF
Sbjct: 128 LLDSFRFCSLGCKIVGTSKNYEKKRRVMGSDSEDSSYSSNSSQGRIMKNSNKNRVV-QSF 187

Query: 241 TPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 267
           TPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY
Sbjct: 188 TPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 220

[Close]
BLAST of Cp4.1LG15g02100 vs. NCBI nr
Match: gi|723725554|ref|XP_010325558.1| (PREDICTED: uncharacterized protein LOC101260164 [Solanum lycopersicum])

HSP 1 Score: 257.3 bits (656), Expect = 2.9e-65
Identity = 153/282 (54.26%), Postives = 169/282 (59.93%), Query Frame = 1 

Query: 1   MGAGVLEEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60
           MGAG  +EEDNRWPPWLKPLL+E FFV                         C L +  H
Sbjct: 1   MGAGGPDEEDNRWPPWLKPLLKERFFV------------------------QCKLHVDSH 60

Query: 61  KDHRAIQITKTGFSGFALFALFALFYDSGSVLSQRSSRHSDYELGFLGLLCFYDSGSVLA 120
           K                   ++ L    G++ S   S H D+                  
Sbjct: 61  KSE---------------CNMYCLDCMDGALCSICLSHHKDHRA---------------I 120

Query: 121 QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 180
           QIRRSSYHDVIRV+EIQK LDIT VQTYIINSA+VVFLNERPQPRPGKGVTNTCEVCERS
Sbjct: 121 QIRRSSYHDVIRVNEIQKFLDITSVQTYIINSAKVVFLNERPQPRPGKGVTNTCEVCERS 180

Query: 181 LLDSFRFCSLGCKIVGISKKFVKK----------RPAMGS---DSEDSSSYSSSRNKNRV 240
           LLDSFRFCSLGCKIVG SK FVK+           PA  +   DSEDS S SS   +N  
Sbjct: 181 LLDSFRFCSLGCKIVGTSKNFVKRPKQSPEKKKSSPAAAAAVYDSEDSYSSSSHGRQNST 228

Query: 241 ---VLQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 267
              V QSF+PSTPPPT V+YRTAKRRKGIPHRAPMGGL+I Y
Sbjct: 241 SNKVHQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVIGY 228

[Close]
BLAST of Cp4.1LG15g02100 vs. NCBI nr
Match: gi|970043583|ref|XP_015083190.1| (PREDICTED: uncharacterized protein LOC107026660 [Solanum pennellii])

HSP 1 Score: 257.3 bits (656), Expect = 2.9e-65
Identity = 153/282 (54.26%), Postives = 169/282 (59.93%), Query Frame = 1 

Query: 1   MGAGVLEEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60
           MGAG  +EEDNRWPPWLKPLL+E FFV                         C L +  H
Sbjct: 21  MGAGGPDEEDNRWPPWLKPLLKERFFV------------------------QCKLHVDSH 80

Query: 61  KDHRAIQITKTGFSGFALFALFALFYDSGSVLSQRSSRHSDYELGFLGLLCFYDSGSVLA 120
           K                   ++ L    G++ S   S H D+                  
Sbjct: 81  KSE---------------CNMYCLDCMDGALCSICLSHHKDHRA---------------I 140

Query: 121 QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 180
           QIRRSSYHDVIRV+EIQK LDIT VQTYIINSA+VVFLNERPQPRPGKGVTNTCEVCERS
Sbjct: 141 QIRRSSYHDVIRVNEIQKFLDITSVQTYIINSAKVVFLNERPQPRPGKGVTNTCEVCERS 200

Query: 181 LLDSFRFCSLGCKIVGISKKFVKK----------RPAMGS---DSEDSSSYSSSRNKNRV 240
           LLDSFRFCSLGCKIVG SK FVK+           PA  +   DSEDS S SS   +N  
Sbjct: 201 LLDSFRFCSLGCKIVGTSKNFVKRPKQSPEKKKSSPAAAAAVYDSEDSYSSSSHGRQNST 248

Query: 241 ---VLQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 267
              V QSF+PSTPPPT V+YRTAKRRKGIPHRAPMGGL+I Y
Sbjct: 261 SNKVHQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVIGY 248

[Close]
BLAST of Cp4.1LG15g02100 vs. NCBI nr
Match: gi|976902273|gb|KVH90227.1| (Protein of unknown function DUF597 [Cynara cardunculus var. scolymus])

HSP 1 Score: 256.1 bits (653), Expect = 6.5e-65
Identity = 151/275 (54.91%), Postives = 168/275 (61.09%), Query Frame = 1 

Query: 1   MGAGVLEEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60
           MG G   EE+N+WPPWLKPLLRESFFV           +C +                 H
Sbjct: 1   MGVGGPVEEENKWPPWLKPLLRESFFV-----------QCKL-----------------H 60

Query: 61  KDHRAIQITKTGFSGFALFALFALFYDSGSVLSQRSSRHSDYELGFLGLLCFYDSGSVLA 120
            D    +             ++ L   +G + S   +RH D+                  
Sbjct: 61  ADSHKSECN-----------MYCLDCINGPLCSLCLNRHEDHRA---------------I 120

Query: 121 QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 180
           QIRRSSYHDVIRVSEIQK LDI+ VQTYIINSA+VVFLNERPQPRPGKGVTNTCEVCERS
Sbjct: 121 QIRRSSYHDVIRVSEIQKFLDISSVQTYIINSAKVVFLNERPQPRPGKGVTNTCEVCERS 180

Query: 181 LLDSFRFCSLGCKIVGISKKF--------VKKRPAMG-SDSEDS-SSYSSSRNKNRVVLQ 240
           LLDSFRFCSLGCKIVG SK F         KK   M  SDSEDS SS +  R +N   +Q
Sbjct: 181 LLDSFRFCSLGCKIVGTSKNFERTMKISPEKKHLIMAVSDSEDSYSSGNHLRQRNNTRIQ 221

Query: 241 SFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIE 266
           SFTPSTPPPT  S+RTAKRRKGIPHRAPMGGLIIE
Sbjct: 241 SFTPSTPPPTAASFRTAKRRKGIPHRAPMGGLIIE 221

The following BLAST results are available for this feature:
BLAST of Cp4.1LG15g02100 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG15g02100 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A103XJ61_CYNCS2.0e-8963.67Uncharacterized protein (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_0... [more]
A0A0E0CU90_9ORYZ1.1e-7957.05Uncharacterized protein OS=Oryza meridionalis PE=4 SV=1[more]
K4CN46_SOLLC2.0e-6554.26Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
A0A103XGG2_CYNCS4.6e-6554.91Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_007799 PE=4 ... [more]
W9QMH4_9ROSA4.3e-6385.91Uncharacterized protein OS=Morus notabilis GN=L484_003212 PE=4 SV=1[more]
BLAST of Cp4.1LG15g02100 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G32700.11.1e-5473.83 PLATZ transcription factor family protein[more]
AT4G17900.12.7e-4871.83 PLATZ transcription factor family protein[more]
AT1G21000.12.6e-3546.96 PLATZ transcription factor family protein[more]
AT5G46710.11.2e-3251.70 PLATZ transcription factor family protein[more]
AT1G76590.12.7e-3279.75 PLATZ transcription factor family protein[more]
BLAST of Cp4.1LG15g02100 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|976903964|gb|KVH91713.1|2.9e-8963.67Protein of unknown function DUF597, partial [Cynara cardunculus var. scolymus][more]
gi|449436818|ref|XP_004136189.1|1.3e-6587.66PREDICTED: uncharacterized protein LOC101209912 [Cucumis sativus][more]
gi|723725554|ref|XP_010325558.1|2.9e-6554.26PREDICTED: uncharacterized protein LOC101260164 [Solanum lycopersicum][more]
gi|970043583|ref|XP_015083190.1|2.9e-6554.26PREDICTED: uncharacterized protein LOC107026660 [Solanum pennellii][more]
gi|976902273|gb|KVH90227.1|6.5e-6554.91Protein of unknown function DUF597 [Cynara cardunculus var. scolymus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006734DUF597
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g02100.1Cp4.1LG15g02100.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006734Protein of unknown function DUF597PFAMPF04640PLATZcoord: 123..194
score: 7.1
NoneNo IPR availablePANTHERPTHR31065FAMILY NOT NAMEDcoord: 121..266
score: 7.1E-140coord: 1..66
score: 7.1E
NoneNo IPR availablePANTHERPTHR31065:SF2PLATZ TRANSCRIPTION FACTOR DOMAIN-CONTAINING PROTEINcoord: 121..266
score: 7.1E-140coord: 1..66
score: 7.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG15g02100Cucsa.313040Cucumber (Gy14) v1cgycpeB0817
Cp4.1LG15g02100Cucsa.321900Cucumber (Gy14) v1cgycpeB0848
Cp4.1LG15g02100CmaCh02G016150Cucurbita maxima (Rimu)cmacpeB615
Cp4.1LG15g02100CmaCh06G006430Cucurbita maxima (Rimu)cmacpeB819
Cp4.1LG15g02100CmaCh16G011690Cucurbita maxima (Rimu)cmacpeB349
Cp4.1LG15g02100CmaCh19G002320Cucurbita maxima (Rimu)cmacpeB522
Cp4.1LG15g02100CmoCh19G002470Cucurbita moschata (Rifu)cmocpeB481
Cp4.1LG15g02100CmoCh06G006490Cucurbita moschata (Rifu)cmocpeB773
Cp4.1LG15g02100CmoCh16G012190Cucurbita moschata (Rifu)cmocpeB310
Cp4.1LG15g02100CmoCh02G016580Cucurbita moschata (Rifu)cmocpeB564
Cp4.1LG15g02100Cla016206Watermelon (97103) v1cpewmB235
Cp4.1LG15g02100Cla008817Watermelon (97103) v1cpewmB249
Cp4.1LG15g02100Csa3G902190Cucumber (Chinese Long) v2cpecuB239
Cp4.1LG15g02100Csa3G009510Cucumber (Chinese Long) v2cpecuB241
Cp4.1LG15g02100MELO3C003418Melon (DHL92) v3.5.1cpemeB232
Cp4.1LG15g02100ClCG10G001510Watermelon (Charleston Gray)cpewcgB227
Cp4.1LG15g02100ClCG09G011890Watermelon (Charleston Gray)cpewcgB216
Cp4.1LG15g02100CSPI03G46620Wild cucumber (PI 183967)cpecpiB243
Cp4.1LG15g02100CSPI03G01530Wild cucumber (PI 183967)cpecpiB245
Cp4.1LG15g02100Lsi07G011850Bottle gourd (USVL1VR-Ls)cpelsiB218
Cp4.1LG15g02100LsiUNG000330Bottle gourd (USVL1VR-Ls)cpelsiB190
Cp4.1LG15g02100MELO3C003418.2Melon (DHL92) v3.6.1cpemedB271
Cp4.1LG15g02100CsaV3_3G001590Cucumber (Chinese Long) v3cpecucB0300
Cp4.1LG15g02100CsaV3_3G049080Cucumber (Chinese Long) v3cpecucB0298
Cp4.1LG15g02100Bhi05G000320Wax gourdcpewgoB0319
Cp4.1LG15g02100CsGy3G001430Cucumber (Gy14) v2cgybcpeB334
Cp4.1LG15g02100CsGy3G044070Cucumber (Gy14) v2cgybcpeB332
Cp4.1LG15g02100Carg08842Silver-seed gourdcarcpeB1094
Cp4.1LG15g02100Carg23391Silver-seed gourdcarcpeB1335
Cp4.1LG15g02100Carg24525Silver-seed gourdcarcpeB1344
Cp4.1LG15g02100Carg26202Silver-seed gourdcarcpeB0703
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG15g02100Cp4.1LG14g09660Cucurbita pepo (Zucchini)cpecpeB231
Cp4.1LG15g02100Cp4.1LG05g00060Cucurbita pepo (Zucchini)cpecpeB273
Cp4.1LG15g02100Cp4.1LG08g08720Cucurbita pepo (Zucchini)cpecpeB285
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG15g02100Cucurbita pepo (Zucchini)cpecpeB268
Cp4.1LG15g02100Cucurbita maxima (Rimu)cmacpeB120
Cp4.1LG15g02100Cucurbita moschata (Rifu)cmocpeB094
Cp4.1LG15g02100Bottle gourd (USVL1VR-Ls)cpelsiB206
Cp4.1LG15g02100Melon (DHL92) v3.5.1cpemeB240
Cp4.1LG15g02100Melon (DHL92) v3.6.1cpemedB281