Lsi06G007900.1 (mRNA) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTGTTTCCTTCTCTCCATTAAAGCCCTCCCCTTTTTCTCTGCCCTCACTCGGTCGGGCTGGTTCTGGCCTTCTTCCTAAACAAATTCCCAAATCGGCCACCTCCCCATCCCCGACCCCGGCCCTCTCTCCTCACGCGCGTGGCTGGCGGGTCGTCACGTTCCCCCATTGCCACTCGCCTTTTTTTTGTTTGTTTGTTTTTTTCTTTATACATAACCCTAATGGATAAGAAACACTTGCAAAGGATGCCTTCATCCCTATCCTCGTCGTCATCGTGCCCGTCGCTCCACGAGTCGGACGACGAGCTGAAGCATATGCCATTGGCACCACCGCGATTGAAGAACAAGAAGCGTTTGTCAAAGCAACTTTCAATGTGCGAGACACCAAGGGACCTCGCATGGGAGAAACGGCGACGACAGATGCTCCGCCCAAGGAACGGCTCGACAGATAGGGACGACTTGACCGAAGAGGACTGGAATGAGCTCAAAGGCTGCATTGAGCTAGGGTTTGCATTCAATGAGGAAGATGGGCACAAGCTGTGTGGTACATTGCCGGCCCTTGACCTTTACTTTGCCGTCAATCGGCAGCTATCGCCGAGCCCCGTGTCAACGCCGCAGAGCAGCGCCTCGACGTCATCTCTTGGCGGAAGGTCTTCATCTTTTGAGAGCCCCAAGAGTGAGTCTGATACATGGAGGGTTTGTAGCCCAGGTATGAAGACATAGCTTTCTGTAGGAACTTTAGTTTACTTGCAATTTAATTAGCACTTTTATTCCAGAGAAATTATTTTACCTCAATTTTTTATTCTTTACATTTTGGAAAATCAAGCTTCTAAAACTGTTATATTGTATATTTTAGCAAACTTAAAAAAAAATTCTAAATAAATAAATTAAAGCATCTTCTAAGTTAGAATCATTTAGTTCCCGGGTGATAACCATTTCAATTTTAAAAATTTAATTCTTAACCATCAATTATATATCAAATTATTATTAGTAAGTACAAAATATTATTTTCTAAAATTCAAGGAATAGAATAAATTTACAATTATTTTTTTTAAAAAAAATCATATTTACAAATATTTTAGAAAATGAAGCTACCCATTCAATTTTTTTATTTTTTATTTTTCATTTGATGGATGTAGGAGAAGACCCAAAGCAAGTGAAGGCAAAATTAAGACACTGGGCTCAAGCTGTGGCATGTTCAGTAATGCAATCATTGGGAGAAAAATAAAAGAAAATATTTGAGGAAATATATTGTACAGATGATCAGAAGAGTAAAAAGGAAAAAAAATTAAATTAAAAAAAAAAAGAGGCAGAAAGGGTTTGGTTTCAAACCTTGCATTAGGGTTTGGTGCTACATAAGCTTAAATTAATTCTACAATGCTCTTGTAGTTTTAACAGCAAACATATCTCTCTGATTTGAAGCTAGCTTATTATATACGTGAGGGCCAAAGAAAAAGCCAGAGGCATTTAATGGGAACTTTGGTATATAATTAACTTAGGGGAAAAATATGTTCTTTTTCATTCTCATTATTCAATGTTCATTGTAATTCTATAAATATTATATATATTATATATGTGTGTTTCTCTATGTTGTTCCCCATGTGAAATGTGAACATATCAAACTATATATAAAGCAAAAGTTTAAAAATC ACTGTTTCCTTCTCTCCATTAAAGCCCTCCCCTTTTTCTCTGCCCTCACTCGGTCGGGCTGGTTCTGGCCTTCTTCCTAAACAAATTCCCAAATCGGCCACCTCCCCATCCCCGACCCCGGCCCTCTCTCCTCACGCGCGTGGCTGGCGGGTCGTCACGTTCCCCCATTGCCACTCGCCTTTTTTTTGTTTGTTTGTTTTTTTCTTTATACATAACCCTAATGGATAAGAAACACTTGCAAAGGATGCCTTCATCCCTATCCTCGTCGTCATCGTGCCCGTCGCTCCACGAGTCGGACGACGAGCTGAAGCATATGCCATTGGCACCACCGCGATTGAAGAACAAGAAGCGTTTGTCAAAGCAACTTTCAATGTGCGAGACACCAAGGGACCTCGCATGGGAGAAACGGCGACGACAGATGCTCCGCCCAAGGAACGGCTCGACAGATAGGGACGACTTGACCGAAGAGGACTGGAATGAGCTCAAAGGCTGCATTGAGCTAGGGTTTGCATTCAATGAGGAAGATGGGCACAAGCTGTGTGGTACATTGCCGGCCCTTGACCTTTACTTTGCCGTCAATCGGCAGCTATCGCCGAGCCCCGTGTCAACGCCGCAGAGCAGCGCCTCGACGTCATCTCTTGGCGGAAGGTCTTCATCTTTTGAGAGCCCCAAGAGTGAGTCTGATACATGGAGGGTTTGTAGCCCAGGAGAAGACCCAAAGCAAGTGAAGGCAAAATTAAGACACTGGGCTCAAGCTGTGGCATGTTCAGTAATGCAATCATTGGGAGAAAAATAAAAGAAAATATTTGAGGAAATATATTGTACAGATGATCAGAAGAGTAAAAAGGAAAAAAAATTAAATTAAAAAAAAAAAGAGGCAGAAAGGGTTTGGTTTCAAACCTTGCATTAGGGTTTGGTGCTACATAAGCTTAAATTAATTCTACAATGCTCTTGTAGTTTTAACAGCAAACATATCTCTCTGATTTGAAGCTAGCTTATTATATACGTGAGGGCCAAAGAAAAAGCCAGAGGCATTTAATGGGAACTTTGGTATATAATTAACTTAGGGGAAAAATATGTTCTTTTTCATTCTCATTATTCAATGTTCATTGTAATTCTATAAATATTATATATATTATATATGTGTGTTTCTCTATGTTGTTCCCCATGTGAAATGTGAACATATCAAACTATATATAAAGCAAAAGTTTAAAAATC ATGGATAAGAAACACTTGCAAAGGATGCCTTCATCCCTATCCTCGTCGTCATCGTGCCCGTCGCTCCACGAGTCGGACGACGAGCTGAAGCATATGCCATTGGCACCACCGCGATTGAAGAACAAGAAGCGTTTGTCAAAGCAACTTTCAATGTGCGAGACACCAAGGGACCTCGCATGGGAGAAACGGCGACGACAGATGCTCCGCCCAAGGAACGGCTCGACAGATAGGGACGACTTGACCGAAGAGGACTGGAATGAGCTCAAAGGCTGCATTGAGCTAGGGTTTGCATTCAATGAGGAAGATGGGCACAAGCTGTGTGGTACATTGCCGGCCCTTGACCTTTACTTTGCCGTCAATCGGCAGCTATCGCCGAGCCCCGTGTCAACGCCGCAGAGCAGCGCCTCGACGTCATCTCTTGGCGGAAGGTCTTCATCTTTTGAGAGCCCCAAGAGTGAGTCTGATACATGGAGGGTTTGTAGCCCAGGAGAAGACCCAAAGCAAGTGAAGGCAAAATTAAGACACTGGGCTCAAGCTGTGGCATGTTCAGTAATGCAATCATTGGGAGAAAAATAA MDKKHLQRMPSSLSSSSSCPSLHESDDELKHMPLAPPRLKNKKRLSKQLSMCETPRDLAWEKRRRQMLRPRNGSTDRDDLTEEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTPQSSASTSSLGGRSSSFESPKSESDTWRVCSPGEDPKQVKAKLRHWAQAVACSVMQSLGEK
BLAST of Lsi06G007900.1 vs. TrEMBL
Match: A0A0A0LY38_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690230 PE=4 SV=1) HSP 1 Score: 359.8 bits (922), Expect = 2.1e-96 Identity = 182/192 (94.79%), Postives = 188/192 (97.92%), Query Frame = 1
BLAST of Lsi06G007900.1 vs. TrEMBL
Match: M5W1A3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016189mg PE=4 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 8.6e-66 Identity = 136/186 (73.12%), Postives = 158/186 (84.95%), Query Frame = 1
BLAST of Lsi06G007900.1 vs. TrEMBL
Match: A0A0S3SQ61_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G161300 PE=4 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 2.8e-64 Identity = 136/183 (74.32%), Postives = 151/183 (82.51%), Query Frame = 1
BLAST of Lsi06G007900.1 vs. TrEMBL
Match: V4SEL2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030288mg PE=4 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 3.6e-64 Identity = 141/197 (71.57%), Postives = 159/197 (80.71%), Query Frame = 1
BLAST of Lsi06G007900.1 vs. TrEMBL
Match: V7BG30_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G188200g PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 2.0e-62 Identity = 130/177 (73.45%), Postives = 147/177 (83.05%), Query Frame = 1
BLAST of Lsi06G007900.1 vs. TAIR10
Match: AT1G08790.1 (AT1G08790.1 Protein of unknown function (DUF1685)) HSP 1 Score: 197.2 bits (500), Expect = 9.1e-51 Identity = 118/188 (62.77%), Postives = 141/188 (75.00%), Query Frame = 1
BLAST of Lsi06G007900.1 vs. TAIR10
Match: AT5G28690.1 (AT5G28690.1 Protein of unknown function (DUF1685)) HSP 1 Score: 177.2 bits (448), Expect = 9.8e-45 Identity = 110/187 (58.82%), Postives = 131/187 (70.05%), Query Frame = 1
BLAST of Lsi06G007900.1 vs. TAIR10
Match: AT3G04700.1 (AT3G04700.1 Protein of unknown function (DUF1685)) HSP 1 Score: 170.6 bits (431), Expect = 9.2e-43 Identity = 95/159 (59.75%), Postives = 119/159 (74.84%), Query Frame = 1
BLAST of Lsi06G007900.1 vs. TAIR10
Match: AT2G43340.1 (AT2G43340.1 Protein of unknown function (DUF1685)) HSP 1 Score: 90.5 bits (223), Expect = 1.2e-18 Identity = 60/173 (34.68%), Postives = 95/173 (54.91%), Query Frame = 1
BLAST of Lsi06G007900.1 vs. TAIR10
Match: AT2G31560.1 (AT2G31560.1 Protein of unknown function (DUF1685)) HSP 1 Score: 85.1 bits (209), Expect = 5.1e-17 Identity = 48/130 (36.92%), Postives = 78/130 (60.00%), Query Frame = 1
BLAST of Lsi06G007900.1 vs. NCBI nr
Match: gi|659125483|ref|XP_008462705.1| (PREDICTED: uncharacterized protein LOC103501007 [Cucumis melo]) HSP 1 Score: 374.8 bits (961), Expect = 9.1e-101 Identity = 187/191 (97.91%), Postives = 189/191 (98.95%), Query Frame = 1
BLAST of Lsi06G007900.1 vs. NCBI nr
Match: gi|449449555|ref|XP_004142530.1| (PREDICTED: uncharacterized protein LOC101212719 [Cucumis sativus]) HSP 1 Score: 359.8 bits (922), Expect = 3.0e-96 Identity = 182/192 (94.79%), Postives = 188/192 (97.92%), Query Frame = 1
BLAST of Lsi06G007900.1 vs. NCBI nr
Match: gi|1009117682|ref|XP_015875448.1| (PREDICTED: uncharacterized protein LOC107412235 [Ziziphus jujuba]) HSP 1 Score: 270.0 bits (689), Expect = 3.1e-69 Identity = 140/193 (72.54%), Postives = 165/193 (85.49%), Query Frame = 1
BLAST of Lsi06G007900.1 vs. NCBI nr
Match: gi|595831489|ref|XP_007206285.1| (hypothetical protein PRUPE_ppa016189mg [Prunus persica]) HSP 1 Score: 258.1 bits (658), Expect = 1.2e-65 Identity = 136/186 (73.12%), Postives = 158/186 (84.95%), Query Frame = 1
BLAST of Lsi06G007900.1 vs. NCBI nr
Match: gi|568869325|ref|XP_006487878.1| (PREDICTED: uncharacterized protein LOC102613894 [Citrus sinensis]) HSP 1 Score: 254.2 bits (648), Expect = 1.8e-64 Identity = 142/196 (72.45%), Postives = 160/196 (81.63%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
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