Lsi11G009870.1 (mRNA) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATATTGTTTATTTTTTCTTTTGATATTCTTATTTGATTTAGTTAGACTTGCAACTATAAATTGGATTTTTGGTGAAAAAGATTGAAAAAAGAGTTTTTAAAACAAAAGGAAAAAAATGAGTTTTTGGAAAAGTGAGAATCCCACATTGCTTAATTTAGCATTGGGATCTCACTTTATTTACCTTTTCCTTTACTGATGGGCTTGGGCCCCAAGGGGTACCCATGTTTTGAAAAGGATGAGGAGATAGGCAATGGTCAGCTTGGTGACTTCGAGGTGAGGTGGCAATAAAGATAATTTTTTGTTAGTATTTTATTTTATTTTAATTTTTTCAAAATAATAAAATCTCTTTTAGAATTTACGGTCTTGCCCCTCGCCGCATCCTTCGCATCCGCACCGTCTTTTTTGGCGCACGTGGTGTGGACGCTCCTCACCGGGCGGCGCACGTTCTGTGGCCGAGCGTTCGTCCCTCATGCGACAGTTGAGCCTCGTGCAGTATAAATGCCCTGCCATCTTCAGTTGAAAGTAGGACGAAAAATCTTCTCTCTGAATATCGAGCAACATAGAAAGAGTGTGAGTACCGATCGATTCTTGTGCGAGTTTCGACTGAGACAGTATTATTCTGGGCTGTTTTATCCTGGGGACGGCGTGGCATTCAGTCAGAACTGCAAGCACCTTGGGCAGAGCCGCGAAACGTCTTAAAGAGAGCGAGCTCCGCGACTCAGCCTTCACGAGCTTTTATTTTGCAGGTTCATTGCATAGTAGGCATCCAACTTCATCGCATAGCAAGCGTCCAACACAGTTCATCGCATACCAGCGTTGAGTTGACCACCTTGCGTTGAACGCATTATGCACAAGGTTTCCAACAATTTTAAGACGATATCCATCTACCGTTATAGTAATGGCCTAAAACGATGTCATGGTCTCCGATCTCAACCAACCATTCTGTTTCGAAGGAGGGAACTTCAAGCGGTGAAAACAGAAGATGATGTTCTTCCTCACCGTCAAGAAGGTCACTGATACCTGCAGCACGGAAAAACCAGAAGTCCCGGAGAAAAATCCAACTAATGAGCAGATCAAGGCAGTTGCTGACTAGGAAGAAAAGAATTTTTTGTGTAAGAATTTTATATTAAATGGTTTGACTGATGATCTGTATGATTATTACAGTTCTATGAAGACAGCAAAAGATATATGGGAGGCACTGCAGAAAAAGTACGACACCGAGGAGGCCGGATCGAAGAAATATGCTGTAAGCCATTACTTGAAGTTCCAGATGACGAACGAAAAGTCTGTGGAGTTCCAATCCCATGAATTGCAGAAAATCGCTCATGAAATTATTAGCGAAGGTATGCCTCTGAACGAGCAATTTCAAATTGCTGTTATTATTGACAAATTGCCCCCTATGTGGAAGGATTTTAAAAATACGTTGAGGCACAAGACCAAGGAATTCTCCATGGAGAGCCTGATCCCACGTCTGAGGATCGAGGAGGAGGCCTAGAAGCAGGACCAGAAGGAGAAGGTAAACGCCTTGCCAAGGAAACCCGTCCCAGCCGCCGTGAAACCTGACCAGAAGCAGAAAAGAACTAAAAGAAAAGGTGAGAATCGTGGATCCAGCAACCAACAGAACCAGAAGAGACAGAGACCCCCCTCAGGAGAAACTGTACAGTTCCTCTGCTATAACTGTAATAAACCTGGACATATGGCTAGAAACTGTAGGAACGGTCGTCGTCCTGCTGGGCATGCAAACCTGACAGAAGAGTCGTTGATAGCCATGATCACAGAAGTAAATGTGATCGGTGGTTTTAAGGGATGGTGGATAGACACGGGCCCCACGCGCCATGTCTGTCACGACCTTAGTCAGTTTAAAACATACACTGAAACTAAGGATAAGAATGTTCTGTTGGGGGATCACCACTCGTCAAGAGTTGCTGGAACGGGCAAGGTGAAGCTGAAGTTTACCTCCGAAAAGACGCTCACTCTAAGGGATGTCTTGCACACTCCAGAGATAAGGAAGAACCTGGTCTCGGGTTATCTCCTCAGTAAGGCTGGCTTCACACAAACCATAGGGGCAGATTTGTACACTTTAACTAAAAACAACATGTTTGTAGGAAAATGATACGCAACGGATGGCATGTTTAAGTTAAATGTTGAAATTAATAAAGCAAATTCTTCTGCGTATATGTTGTCTTCGTTTAATGTTTGGCATGCTAGGAATTAGTAACATGAGTAGGTTAGACATGATTCCTAAGTTATCTTCAAATGAATTTGATAAATGCGAATTTTGTAGTCAAGCTAAAATAACAAAAACCTCGCATAAATCTGTACTTAGGGAATCTGAGCCTCTAGATTTAATTCATTCTGATATATGTGAATTTGATGGTGTTTTGACTAGAAATAGCAAACGTTATTTTATCACGTTTATAGATGATTACTCTGATTTCACTTTTGTTTATTTGTTGAAAAATAAAAGTGATGCATTTGATGCTTTCAAGCTTTTTGTAGTTGAAATAGAAAACCAGTATAATAGAAAGGCTAAAAGACTTCGTAGTGATAGGGGAACTGAGTATGACTCAGATAGTTTTAATAAATTCTATAACTCACATGGAATAATACATGAAAAGACTGCGCCTTACTCTCTTGAAATGAACGGTAAAGCTGAAAGGAAGAATAGAACTCTAGCCGAGCTAGTAGTTGCTATCCGCCTTAATTTAGGAGCTGCGTCCTATTGGTGGGGAGAAATTCTCCATACTGTGTGTTATGTCCTAAATAGAATTCCAAAATCTAAAAACACAACTTCACCATATGAAGTCCTTAAGAATAAAAGACCAAACTTGTCCTATTTTAGAACGTGGGGTTGCTTAGCCTACGTTAGGATTCCTGACCCAAAAAGAAGAAAACTTACCAGTAGGGCCTACGAGTGCGTTTTTATAGGTTATGTCGTGAATAGTAAAGCCTATAGGTTCTACGATCTTTCAAACCAAGTAGTCATTGAATCGATAGATGCCGACTTCTTTGAGGATAGATTTCCCTTTAAATCTAGAAATAGTGGGGGCGTGAGCTCCAGTAGTCTACCTCCAGTTAGAAGTCTTCCCTCTTCTGAGGAAGCCGTCTCTGAGCCTAAAAGGAGCAAACAGACAAGAACAGTTAAAGACTTTGGAGACGACTTTCAGACCTACAATGTAGAAGAAGATCCTAGAGACCTTAAGGAAGTCCTGTCCTCTGTAAACGCCAACTTATGGCAAGAAGCTATAAACGACGAAATGGACTCTCTAGAGTCAAATAGGACTTGGCACCTAGTAGACCTACCCCCAGGTTGCAAAGCCATAGGATGTAAATGGATCCTGAAGAAGAAACTTAAACCTGATGGAACCATAGACAAGTTTAAAGCTAGGTTAGTAGCCAAAGGCTTCAGACGGAGAGAAAACATAGACTTCTTTGACACGTTTTCACCTGTCACTAGAATCACTTCCATTCACGTACTGTTTTCTCTCGCCGCTTTAAACAACCTCGTAGTACATTAGATGGATGTAAAGACTACATTCCTAAACGGTGATTTGGAAGAAGAGATTTATATGGAACAACCAGAAGGCTTTGTAGTCTATGGTCAGGAGAACAAAGTCTGTAAGTTAGATAAATCTCTCTATGGCCTGAAACAAGCTCCTAAGCAATGGCATGAGAAATTTGACAACCTTATTCTGTCTGAACGTTTCAAAGTTAATGAAAGTGACAAATGCATCTACTATAAGTTTGAAAATAGCCTTTGCACAATCCTTTGCTTATATGTAGATGATTTGTTAATATTTGGTTCAAATTTGCACGTCATTAATAACGTAAAATCTATGTTGAGTGCAAACTTTGATATGAAAGACTTAGGAGAAGCAAGTGTAATCTTAGGCATAAAAGTCACTAGGTCAGAAAAGGGAATTTCCTTAGATCAATCTCATTATGTAGAAAAGATCCTTAGAAAATACAATTACTTTGATTGTAAACCTGCCTATACTCCTTATGATCGTAGTGTAAAGTTGTTCAAGAACACTGGTGACAGTGTTAATCAATCCGAGTATGCGAGCATCATAGGCAGTCTTAGATGTGTTGCTGATTGCACTAGACCAGACATAGCTTATGCTGTAGGTTTACTATGTAGGTTTACAAGCAGACCTAGTATAGAGTATTGGAATGCTATAGAAAGGGTTATGAGATATTTAAAGAAAACTCAGAACCTAAGATTACACTATCAAACGTTTCCTGCTGTCCTGGAAGGCTATAGCGATGCTGATTGGAACTCCCTCTCGGATGACTCAAAGGCTACCAGCGGCTATATCTTCAATATAGCTAGTGGAGCTGTTTCCTGGAAGTCTAAGAAACAGACAATATTAGCCTAGTCAACGATGGAGTCAGAAATGATAGCACTGGCAACAGCCAGTGAAGGAGCAGGCTGGCTTAGAAGTCTGCTATCAGAGATTCCCTTATGGGAAAAGCCGGTACCAGCCATTTTGATCCATTGTGATAGTACTGCAACTATCGCAAAAGTTCAGAACCGTTATTATAACAGAAAGAGACGACAAATACGTCGTAAGCACAACACCATTAGAGAGTTCCTCACTATTGGTGCCGTTAAAGTGGATCATATTCTGACTGATGAGAACTTGGCAGATCCTTTGACGAAAGGACTGGCCAGAGAAAAGGTTTTCAAACCCTTAGAAAGGATGAGACTCCTGCCTATAGAAAGATGAATCACGAGTGAGGAAAACCCAACCTGTAGACTGGAGATCCCAAGAAACAGGTTCAAAGGGTAATAACTGATCACAAGTGATAGGTAGTGAATCATGCAAATAAACATAGAGTTCACTTCCTAGGACCTAGAGTCTTGGCATGATATCTTGAAGTGAATGATAGGTTGAACTTAGTTCTTAATGAGATCTATACTTGATGTCAAGTGGAGTACCTAGCTACAGAAGTACCCCTGATAGACTCACCTATGTGAATGTGGAAGTGTAGGCCGCTTCCTATGTAATTTTAGGCAAATTCTCTAGAGCGTTCACTAGACTGGGATACACGTGCATGGCCTCAAAGCACGGGCTTTTCGAACTACACTCTAGTAATGCTGTGTGTGAGATGTTGTCAGAGATAGAGTTCAAAACCAAGAGTTACTCTAGTAAAATCTGAATCATCAACACTACGTAAAGGTTCAAGTCGTAAGACACCTTTGCCTATGTACAATGTTATACATTCTGAAATTGCTCGATGAACAAAATGTTTTCCTGTTTTCAAAAATTTTTCAAGTGGGGGATTGTTGATGAAAAAGATTGAAAAAATAGTTTTTAAAACAAAAAGGAAAAATGAGTTTTTGGAAAAGTGAGAATCCCACATTACTCAGTTTAGCATTGGGATCTCACTTTATTTACCATTCCCTTTAGTGATGGGCTTGGGCCTCAAGGGGTACTCATGTCTTGGAAAGGGTGAGGAGATAGGCAATGGTCGTCGTGCGTGATAATTTTTTGTTATTATTTTATTTTATTTTAATTTTTAAAAAATAATAAAATCTCTTTTAGAATTTACGGTCTTGTCCCTTGCCACATCGATCGCATGGTCTTCGGTCATCACGTGGTCTTCGCATCCGTGCCATCTTTTTCGACGCACGTGGTATGGACGAGCGCTCACCGCGCGGCGCATGTTCTGTGGCTAAAAAATTAAAATCTCTTTTAGAATTTACGGTCTTGCCCCTTGCTGAATCGATCGCATGGTCTTCGCATCCGCGCCGTCTTTTTCGGCGCACGTGGTGTGGACGAGCGCTCACCGTGCGGCGCACGTTCTGTGGCCGAACGCTCGTCTCTCATGCGACAGTTGAGCCTCACACAGTATAAATGTCCTGCCATCTTCAGTTGAAAGTAGGATGACAAATCTTTTCTCTTTGAATACCGAGCAACATAGAAAGAGTGTGAGTATCGATCGATTCTTATGCGAGTGCGATACTTTTTTCTTTTTATTCAAGATTTTATGGGAATGAACCCACTACAGAAAATCTAATTAGTTGGAATAAAATTCCTTTTTCTACGTAACCAATCTTCTCATATACGATTAACTTCTTATAGGGGCTTTTTTGAGCGAATATATTTCTATGGAAAAATAGAACATCTTGTCAAAGTGGTTGCTAATTCTTTTTCAGCTATCTTACGGGTCTTCAAGGATCCTTTCATGCATTATGTTAGATATCAAGGAAAATCCATTCTGGTTTCAAAAGATACGCCACTTCTGATTAATAAGTGGAAATATTACCTTGTCAATTTATGA ATGATATTGGGCTTTTTTGAGCGAATATATTTCTATGGAAAAATAGAACATCTTGTCAAAGTGGTTGCTAATTCTTTTTCAGCTATCTTACGGGTCTTCAAGGATCCTTTCATGCATTATGTTAGATATCAAGGAAAATCCATTCTGGTTTCAAAAGATACGCCACTTCTGATTAATAAGTGGAAATATTACCTTGTCAATTTATGA ATGATATTGGGCTTTTTTGAGCGAATATATTTCTATGGAAAAATAGAACATCTTGTCAAAGTGGTTGCTAATTCTTTTTCAGCTATCTTACGGGTCTTCAAGGATCCTTTCATGCATTATGTTAGATATCAAGGAAAATCCATTCTGGTTTCAAAAGATACGCCACTTCTGATTAATAAGTGGAAATATTACCTTGTCAATTTATGA MILGFFERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKYYLVNL
BLAST of Lsi11G009870.1 vs. Swiss-Prot
Match: MATK_CUCSA (Maturase K OS=Cucumis sativus GN=matK PE=3 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 1.4e-27 Identity = 59/65 (90.77%), Postives = 60/65 (92.31%), Query Frame = 1
BLAST of Lsi11G009870.1 vs. Swiss-Prot
Match: MATK_RHACA (Maturase K OS=Rhamnus cathartica GN=matK PE=3 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 9.3e-24 Identity = 54/65 (83.08%), Postives = 58/65 (89.23%), Query Frame = 1
BLAST of Lsi11G009870.1 vs. Swiss-Prot
Match: MATK_HAMVI (Maturase K OS=Hamamelis virginiana GN=matK PE=3 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 2.7e-23 Identity = 50/61 (81.97%), Postives = 54/61 (88.52%), Query Frame = 1
BLAST of Lsi11G009870.1 vs. Swiss-Prot
Match: MATK_HAMMO (Maturase K OS=Hamamelis mollis GN=matK PE=3 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 2.7e-23 Identity = 50/61 (81.97%), Postives = 54/61 (88.52%), Query Frame = 1
BLAST of Lsi11G009870.1 vs. Swiss-Prot
Match: MATK_HAMJA (Maturase K OS=Hamamelis japonica GN=matK PE=3 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 2.7e-23 Identity = 50/61 (81.97%), Postives = 54/61 (88.52%), Query Frame = 1
BLAST of Lsi11G009870.1 vs. TrEMBL
Match: A0A140GDQ3_LAGSI (Maturase K (Fragment) OS=Lagenaria siceraria GN=matK PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 8.7e-29 Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 1
BLAST of Lsi11G009870.1 vs. TrEMBL
Match: C7E4B9_9ROSI (Maturase K (Fragment) OS=Lagenaria sphaerica GN=matk PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 8.7e-29 Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 1
BLAST of Lsi11G009870.1 vs. TrEMBL
Match: X2F8C9_LAGSI (Maturase K OS=Lagenaria siceraria GN=matK PE=3 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 8.7e-29 Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 1
BLAST of Lsi11G009870.1 vs. TrEMBL
Match: A5X4W2_LAGSI (Maturase K (Fragment) OS=Lagenaria siceraria GN=matK PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 8.7e-29 Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 1
BLAST of Lsi11G009870.1 vs. TrEMBL
Match: X2F5H9_LAGSI (Maturase K OS=Lagenaria siceraria GN=matK PE=3 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 8.7e-29 Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 1
BLAST of Lsi11G009870.1 vs. TAIR10
Match: ATCG00040.1 (ATCG00040.1 maturase K) HSP 1 Score: 97.8 bits (242), Expect = 2.7e-21 Identity = 44/63 (69.84%), Postives = 50/63 (79.37%), Query Frame = 1
BLAST of Lsi11G009870.1 vs. NCBI nr
Match: gi|156142282|gb|ABU51901.1| (maturase K, partial (chloroplast) [Lagenaria sphaerica]) HSP 1 Score: 133.7 bits (335), Expect = 1.3e-28 Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 1
BLAST of Lsi11G009870.1 vs. NCBI nr
Match: gi|595645580|gb|AHM89037.1| (maturase K (chloroplast) [Lagenaria siceraria]) HSP 1 Score: 133.7 bits (335), Expect = 1.3e-28 Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 1
BLAST of Lsi11G009870.1 vs. NCBI nr
Match: gi|253991949|gb|ACT52309.1| (maturase K [Lagenaria sphaerica]) HSP 1 Score: 133.7 bits (335), Expect = 1.3e-28 Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 1
BLAST of Lsi11G009870.1 vs. NCBI nr
Match: gi|837370698|gb|AKM94404.1| (maturase K, partial (chloroplast) [Peponium vogelii]) HSP 1 Score: 133.7 bits (335), Expect = 1.3e-28 Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 1
BLAST of Lsi11G009870.1 vs. NCBI nr
Match: gi|573016882|gb|AHF72617.1| (maturase K, partial [Lagenaria siceraria]) HSP 1 Score: 133.7 bits (335), Expect = 1.3e-28 Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
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