Lsi11G009870 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi11G009870
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionMaturase K
Locationchr11 : 16460968 .. 16467258 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATATTGTTTATTTTTTCTTTTGATATTCTTATTTGATTTAGTTAGACTTGCAACTATAAATTGGATTTTTGGTGAAAAAGATTGAAAAAAGAGTTTTTAAAACAAAAGGAAAAAAATGAGTTTTTGGAAAAGTGAGAATCCCACATTGCTTAATTTAGCATTGGGATCTCACTTTATTTACCTTTTCCTTTACTGATGGGCTTGGGCCCCAAGGGGTACCCATGTTTTGAAAAGGATGAGGAGATAGGCAATGGTCAGCTTGGTGACTTCGAGGTGAGGTGGCAATAAAGATAATTTTTTGTTAGTATTTTATTTTATTTTAATTTTTTCAAAATAATAAAATCTCTTTTAGAATTTACGGTCTTGCCCCTCGCCGCATCCTTCGCATCCGCACCGTCTTTTTTGGCGCACGTGGTGTGGACGCTCCTCACCGGGCGGCGCACGTTCTGTGGCCGAGCGTTCGTCCCTCATGCGACAGTTGAGCCTCGTGCAGTATAAATGCCCTGCCATCTTCAGTTGAAAGTAGGACGAAAAATCTTCTCTCTGAATATCGAGCAACATAGAAAGAGTGTGAGTACCGATCGATTCTTGTGCGAGTTTCGACTGAGACAGTATTATTCTGGGCTGTTTTATCCTGGGGACGGCGTGGCATTCAGTCAGAACTGCAAGCACCTTGGGCAGAGCCGCGAAACGTCTTAAAGAGAGCGAGCTCCGCGACTCAGCCTTCACGAGCTTTTATTTTGCAGGTTCATTGCATAGTAGGCATCCAACTTCATCGCATAGCAAGCGTCCAACACAGTTCATCGCATACCAGCGTTGAGTTGACCACCTTGCGTTGAACGCATTATGCACAAGGTTTCCAACAATTTTAAGACGATATCCATCTACCGTTATAGTAATGGCCTAAAACGATGTCATGGTCTCCGATCTCAACCAACCATTCTGTTTCGAAGGAGGGAACTTCAAGCGGTGAAAACAGAAGATGATGTTCTTCCTCACCGTCAAGAAGGTCACTGATACCTGCAGCACGGAAAAACCAGAAGTCCCGGAGAAAAATCCAACTAATGAGCAGATCAAGGCAGTTGCTGACTAGGAAGAAAAGAATTTTTTGTGTAAGAATTTTATATTAAATGGTTTGACTGATGATCTGTATGATTATTACAGTTCTATGAAGACAGCAAAAGATATATGGGAGGCACTGCAGAAAAAGTACGACACCGAGGAGGCCGGATCGAAGAAATATGCTGTAAGCCATTACTTGAAGTTCCAGATGACGAACGAAAAGTCTGTGGAGTTCCAATCCCATGAATTGCAGAAAATCGCTCATGAAATTATTAGCGAAGGTATGCCTCTGAACGAGCAATTTCAAATTGCTGTTATTATTGACAAATTGCCCCCTATGTGGAAGGATTTTAAAAATACGTTGAGGCACAAGACCAAGGAATTCTCCATGGAGAGCCTGATCCCACGTCTGAGGATCGAGGAGGAGGCCTAGAAGCAGGACCAGAAGGAGAAGGTAAACGCCTTGCCAAGGAAACCCGTCCCAGCCGCCGTGAAACCTGACCAGAAGCAGAAAAGAACTAAAAGAAAAGGTGAGAATCGTGGATCCAGCAACCAACAGAACCAGAAGAGACAGAGACCCCCCTCAGGAGAAACTGTACAGTTCCTCTGCTATAACTGTAATAAACCTGGACATATGGCTAGAAACTGTAGGAACGGTCGTCGTCCTGCTGGGCATGCAAACCTGACAGAAGAGTCGTTGATAGCCATGATCACAGAAGTAAATGTGATCGGTGGTTTTAAGGGATGGTGGATAGACACGGGCCCCACGCGCCATGTCTGTCACGACCTTAGTCAGTTTAAAACATACACTGAAACTAAGGATAAGAATGTTCTGTTGGGGGATCACCACTCGTCAAGAGTTGCTGGAACGGGCAAGGTGAAGCTGAAGTTTACCTCCGAAAAGACGCTCACTCTAAGGGATGTCTTGCACACTCCAGAGATAAGGAAGAACCTGGTCTCGGGTTATCTCCTCAGTAAGGCTGGCTTCACACAAACCATAGGGGCAGATTTGTACACTTTAACTAAAAACAACATGTTTGTAGGAAAATGATACGCAACGGATGGCATGTTTAAGTTAAATGTTGAAATTAATAAAGCAAATTCTTCTGCGTATATGTTGTCTTCGTTTAATGTTTGGCATGCTAGGAATTAGTAACATGAGTAGGTTAGACATGATTCCTAAGTTATCTTCAAATGAATTTGATAAATGCGAATTTTGTAGTCAAGCTAAAATAACAAAAACCTCGCATAAATCTGTACTTAGGGAATCTGAGCCTCTAGATTTAATTCATTCTGATATATGTGAATTTGATGGTGTTTTGACTAGAAATAGCAAACGTTATTTTATCACGTTTATAGATGATTACTCTGATTTCACTTTTGTTTATTTGTTGAAAAATAAAAGTGATGCATTTGATGCTTTCAAGCTTTTTGTAGTTGAAATAGAAAACCAGTATAATAGAAAGGCTAAAAGACTTCGTAGTGATAGGGGAACTGAGTATGACTCAGATAGTTTTAATAAATTCTATAACTCACATGGAATAATACATGAAAAGACTGCGCCTTACTCTCTTGAAATGAACGGTAAAGCTGAAAGGAAGAATAGAACTCTAGCCGAGCTAGTAGTTGCTATCCGCCTTAATTTAGGAGCTGCGTCCTATTGGTGGGGAGAAATTCTCCATACTGTGTGTTATGTCCTAAATAGAATTCCAAAATCTAAAAACACAACTTCACCATATGAAGTCCTTAAGAATAAAAGACCAAACTTGTCCTATTTTAGAACGTGGGGTTGCTTAGCCTACGTTAGGATTCCTGACCCAAAAAGAAGAAAACTTACCAGTAGGGCCTACGAGTGCGTTTTTATAGGTTATGTCGTGAATAGTAAAGCCTATAGGTTCTACGATCTTTCAAACCAAGTAGTCATTGAATCGATAGATGCCGACTTCTTTGAGGATAGATTTCCCTTTAAATCTAGAAATAGTGGGGGCGTGAGCTCCAGTAGTCTACCTCCAGTTAGAAGTCTTCCCTCTTCTGAGGAAGCCGTCTCTGAGCCTAAAAGGAGCAAACAGACAAGAACAGTTAAAGACTTTGGAGACGACTTTCAGACCTACAATGTAGAAGAAGATCCTAGAGACCTTAAGGAAGTCCTGTCCTCTGTAAACGCCAACTTATGGCAAGAAGCTATAAACGACGAAATGGACTCTCTAGAGTCAAATAGGACTTGGCACCTAGTAGACCTACCCCCAGGTTGCAAAGCCATAGGATGTAAATGGATCCTGAAGAAGAAACTTAAACCTGATGGAACCATAGACAAGTTTAAAGCTAGGTTAGTAGCCAAAGGCTTCAGACGGAGAGAAAACATAGACTTCTTTGACACGTTTTCACCTGTCACTAGAATCACTTCCATTCACGTACTGTTTTCTCTCGCCGCTTTAAACAACCTCGTAGTACATTAGATGGATGTAAAGACTACATTCCTAAACGGTGATTTGGAAGAAGAGATTTATATGGAACAACCAGAAGGCTTTGTAGTCTATGGTCAGGAGAACAAAGTCTGTAAGTTAGATAAATCTCTCTATGGCCTGAAACAAGCTCCTAAGCAATGGCATGAGAAATTTGACAACCTTATTCTGTCTGAACGTTTCAAAGTTAATGAAAGTGACAAATGCATCTACTATAAGTTTGAAAATAGCCTTTGCACAATCCTTTGCTTATATGTAGATGATTTGTTAATATTTGGTTCAAATTTGCACGTCATTAATAACGTAAAATCTATGTTGAGTGCAAACTTTGATATGAAAGACTTAGGAGAAGCAAGTGTAATCTTAGGCATAAAAGTCACTAGGTCAGAAAAGGGAATTTCCTTAGATCAATCTCATTATGTAGAAAAGATCCTTAGAAAATACAATTACTTTGATTGTAAACCTGCCTATACTCCTTATGATCGTAGTGTAAAGTTGTTCAAGAACACTGGTGACAGTGTTAATCAATCCGAGTATGCGAGCATCATAGGCAGTCTTAGATGTGTTGCTGATTGCACTAGACCAGACATAGCTTATGCTGTAGGTTTACTATGTAGGTTTACAAGCAGACCTAGTATAGAGTATTGGAATGCTATAGAAAGGGTTATGAGATATTTAAAGAAAACTCAGAACCTAAGATTACACTATCAAACGTTTCCTGCTGTCCTGGAAGGCTATAGCGATGCTGATTGGAACTCCCTCTCGGATGACTCAAAGGCTACCAGCGGCTATATCTTCAATATAGCTAGTGGAGCTGTTTCCTGGAAGTCTAAGAAACAGACAATATTAGCCTAGTCAACGATGGAGTCAGAAATGATAGCACTGGCAACAGCCAGTGAAGGAGCAGGCTGGCTTAGAAGTCTGCTATCAGAGATTCCCTTATGGGAAAAGCCGGTACCAGCCATTTTGATCCATTGTGATAGTACTGCAACTATCGCAAAAGTTCAGAACCGTTATTATAACAGAAAGAGACGACAAATACGTCGTAAGCACAACACCATTAGAGAGTTCCTCACTATTGGTGCCGTTAAAGTGGATCATATTCTGACTGATGAGAACTTGGCAGATCCTTTGACGAAAGGACTGGCCAGAGAAAAGGTTTTCAAACCCTTAGAAAGGATGAGACTCCTGCCTATAGAAAGATGAATCACGAGTGAGGAAAACCCAACCTGTAGACTGGAGATCCCAAGAAACAGGTTCAAAGGGTAATAACTGATCACAAGTGATAGGTAGTGAATCATGCAAATAAACATAGAGTTCACTTCCTAGGACCTAGAGTCTTGGCATGATATCTTGAAGTGAATGATAGGTTGAACTTAGTTCTTAATGAGATCTATACTTGATGTCAAGTGGAGTACCTAGCTACAGAAGTACCCCTGATAGACTCACCTATGTGAATGTGGAAGTGTAGGCCGCTTCCTATGTAATTTTAGGCAAATTCTCTAGAGCGTTCACTAGACTGGGATACACGTGCATGGCCTCAAAGCACGGGCTTTTCGAACTACACTCTAGTAATGCTGTGTGTGAGATGTTGTCAGAGATAGAGTTCAAAACCAAGAGTTACTCTAGTAAAATCTGAATCATCAACACTACGTAAAGGTTCAAGTCGTAAGACACCTTTGCCTATGTACAATGTTATACATTCTGAAATTGCTCGATGAACAAAATGTTTTCCTGTTTTCAAAAATTTTTCAAGTGGGGGATTGTTGATGAAAAAGATTGAAAAAATAGTTTTTAAAACAAAAAGGAAAAATGAGTTTTTGGAAAAGTGAGAATCCCACATTACTCAGTTTAGCATTGGGATCTCACTTTATTTACCATTCCCTTTAGTGATGGGCTTGGGCCTCAAGGGGTACTCATGTCTTGGAAAGGGTGAGGAGATAGGCAATGGTCGTCGTGCGTGATAATTTTTTGTTATTATTTTATTTTATTTTAATTTTTAAAAAATAATAAAATCTCTTTTAGAATTTACGGTCTTGTCCCTTGCCACATCGATCGCATGGTCTTCGGTCATCACGTGGTCTTCGCATCCGTGCCATCTTTTTCGACGCACGTGGTATGGACGAGCGCTCACCGCGCGGCGCATGTTCTGTGGCTAAAAAATTAAAATCTCTTTTAGAATTTACGGTCTTGCCCCTTGCTGAATCGATCGCATGGTCTTCGCATCCGCGCCGTCTTTTTCGGCGCACGTGGTGTGGACGAGCGCTCACCGTGCGGCGCACGTTCTGTGGCCGAACGCTCGTCTCTCATGCGACAGTTGAGCCTCACACAGTATAAATGTCCTGCCATCTTCAGTTGAAAGTAGGATGACAAATCTTTTCTCTTTGAATACCGAGCAACATAGAAAGAGTGTGAGTATCGATCGATTCTTATGCGAGTGCGATACTTTTTTCTTTTTATTCAAGATTTTATGGGAATGAACCCACTACAGAAAATCTAATTAGTTGGAATAAAATTCCTTTTTCTACGTAACCAATCTTCTCATATACGATTAACTTCTTATAGGGGCTTTTTTGAGCGAATATATTTCTATGGAAAAATAGAACATCTTGTCAAAGTGGTTGCTAATTCTTTTTCAGCTATCTTACGGGTCTTCAAGGATCCTTTCATGCATTATGTTAGATATCAAGGAAAATCCATTCTGGTTTCAAAAGATACGCCACTTCTGATTAATAAGTGGAAATATTACCTTGTCAATTTATGA

mRNA sequence

ATGATATTGGGCTTTTTTGAGCGAATATATTTCTATGGAAAAATAGAACATCTTGTCAAAGTGGTTGCTAATTCTTTTTCAGCTATCTTACGGGTCTTCAAGGATCCTTTCATGCATTATGTTAGATATCAAGGAAAATCCATTCTGGTTTCAAAAGATACGCCACTTCTGATTAATAAGTGGAAATATTACCTTGTCAATTTATGA

Coding sequence (CDS)

ATGATATTGGGCTTTTTTGAGCGAATATATTTCTATGGAAAAATAGAACATCTTGTCAAAGTGGTTGCTAATTCTTTTTCAGCTATCTTACGGGTCTTCAAGGATCCTTTCATGCATTATGTTAGATATCAAGGAAAATCCATTCTGGTTTCAAAAGATACGCCACTTCTGATTAATAAGTGGAAATATTACCTTGTCAATTTATGA

Protein sequence

MILGFFERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKYYLVNL
Homology
[Close]
BLAST of Lsi11G009870 vs. Swiss-Prot
Match: MATK_CUCSA (Maturase K OS=Cucumis sativus GN=matK PE=3 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.4e-27
Identity = 59/65 (90.77%), Postives = 60/65 (92.31%), Query Frame = 1 

Query: 4   GFFERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 63
           G FERIYFYGKIEHLVKV AN FSAILRVFKDP +HYVRYQ KSILVSKDTPLLINKWKY
Sbjct: 239 GLFERIYFYGKIEHLVKVFANYFSAILRVFKDPLIHYVRYQAKSILVSKDTPLLINKWKY 298

Query: 64  YLVNL 69
           YLVNL
Sbjct: 299 YLVNL 303

[Close]
BLAST of Lsi11G009870 vs. Swiss-Prot
Match: MATK_RHACA (Maturase K OS=Rhamnus cathartica GN=matK PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 9.3e-24
Identity = 54/65 (83.08%), Postives = 58/65 (89.23%), Query Frame = 1 

Query: 5   FFERIYFYGKIEHLVK-VVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 64
           FFERIYFYGKI+H V+ V AN F AI RVFKDPFMHYVRYQGKS LVSKDTPLL+NKWKY
Sbjct: 238 FFERIYFYGKIKHPVEEVFANDFPAIRRVFKDPFMHYVRYQGKSFLVSKDTPLLMNKWKY 297

Query: 65  YLVNL 69
           YLV+L
Sbjct: 298 YLVHL 302

[Close]
BLAST of Lsi11G009870 vs. Swiss-Prot
Match: MATK_HAMVI (Maturase K OS=Hamamelis virginiana GN=matK PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 2.7e-23
Identity = 50/61 (81.97%), Postives = 54/61 (88.52%), Query Frame = 1 

Query: 7   ERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKYYLV 66
           ERIYFYGKI+HLV+V  N F AIL +FKDPFMHYVRYQGKSIL SK TPLL+NKWKYYLV
Sbjct: 242 ERIYFYGKIKHLVEVFVNDFQAILWLFKDPFMHYVRYQGKSILASKGTPLLMNKWKYYLV 301

Query: 67  N 68
           N
Sbjct: 302 N 302

[Close]
BLAST of Lsi11G009870 vs. Swiss-Prot
Match: MATK_HAMMO (Maturase K OS=Hamamelis mollis GN=matK PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 2.7e-23
Identity = 50/61 (81.97%), Postives = 54/61 (88.52%), Query Frame = 1 

Query: 7   ERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKYYLV 66
           ERIYFYGKI+HLV+V  N F AIL +FKDPFMHYVRYQGKSIL SK TPLL+NKWKYYLV
Sbjct: 242 ERIYFYGKIKHLVEVFVNDFQAILWLFKDPFMHYVRYQGKSILASKGTPLLMNKWKYYLV 301

Query: 67  N 68
           N
Sbjct: 302 N 302

[Close]
BLAST of Lsi11G009870 vs. Swiss-Prot
Match: MATK_HAMJA (Maturase K OS=Hamamelis japonica GN=matK PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 2.7e-23
Identity = 50/61 (81.97%), Postives = 54/61 (88.52%), Query Frame = 1 

Query: 7   ERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKYYLV 66
           ERIYFYGKI+HLV+V  N F AIL +FKDPFMHYVRYQGKSIL SK TPLL+NKWKYYLV
Sbjct: 242 ERIYFYGKIKHLVEVFVNDFQAILWLFKDPFMHYVRYQGKSILASKGTPLLMNKWKYYLV 301

Query: 67  N 68
           N
Sbjct: 302 N 302

[Close]
BLAST of Lsi11G009870 vs. TrEMBL
Match: A0A140GDQ3_LAGSI (Maturase K (Fragment) OS=Lagenaria siceraria GN=matK PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 8.7e-29
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 1 

Query: 4   GFFERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 63
           GFFERIYFYGKIEHLVKV ANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY
Sbjct: 79  GFFERIYFYGKIEHLVKVFANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 138

Query: 64  YLVNL 69
           YLVNL
Sbjct: 139 YLVNL 143

[Close]
BLAST of Lsi11G009870 vs. TrEMBL
Match: C7E4B9_9ROSI (Maturase K (Fragment) OS=Lagenaria sphaerica GN=matk PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 8.7e-29
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 1 

Query: 4   GFFERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 63
           GFFERIYFYGKIEHLVKV ANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY
Sbjct: 70  GFFERIYFYGKIEHLVKVFANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 129

Query: 64  YLVNL 69
           YLVNL
Sbjct: 130 YLVNL 134

[Close]
BLAST of Lsi11G009870 vs. TrEMBL
Match: X2F8C9_LAGSI (Maturase K OS=Lagenaria siceraria GN=matK PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 8.7e-29
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 1 

Query: 4   GFFERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 63
           GFFERIYFYGKIEHLVKV ANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY
Sbjct: 240 GFFERIYFYGKIEHLVKVFANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 299

Query: 64  YLVNL 69
           YLVNL
Sbjct: 300 YLVNL 304

[Close]
BLAST of Lsi11G009870 vs. TrEMBL
Match: A5X4W2_LAGSI (Maturase K (Fragment) OS=Lagenaria siceraria GN=matK PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 8.7e-29
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 1 

Query: 4   GFFERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 63
           GFFERIYFYGKIEHLVKV ANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY
Sbjct: 171 GFFERIYFYGKIEHLVKVFANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 230

Query: 64  YLVNL 69
           YLVNL
Sbjct: 231 YLVNL 235

[Close]
BLAST of Lsi11G009870 vs. TrEMBL
Match: X2F5H9_LAGSI (Maturase K OS=Lagenaria siceraria GN=matK PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 8.7e-29
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 1 

Query: 4   GFFERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 63
           GFFERIYFYGKIEHLVKV ANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY
Sbjct: 240 GFFERIYFYGKIEHLVKVFANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 299

Query: 64  YLVNL 69
           YLVNL
Sbjct: 300 YLVNL 304

[Close]
BLAST of Lsi11G009870 vs. TAIR10
Match: ATCG00040.1 (ATCG00040.1 maturase K)

HSP 1 Score: 97.8 bits (242), Expect = 2.7e-21
Identity = 44/63 (69.84%), Postives = 50/63 (79.37%), Query Frame = 1 

Query: 6   FERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKYYL 65
           FERI FYGKI H  KV  N+F AIL + KDPF+HYVRY G+ IL +KDTPLL+NKWKYY 
Sbjct: 263 FERIVFYGKIHHFFKVFVNNFPAILGLLKDPFIHYVRYHGRCILATKDTPLLMNKWKYYF 322

Query: 66  VNL 69
           VNL
Sbjct: 323 VNL 325

[Close]
BLAST of Lsi11G009870 vs. NCBI nr
Match: gi|156142282|gb|ABU51901.1| (maturase K, partial (chloroplast) [Lagenaria sphaerica])

HSP 1 Score: 133.7 bits (335), Expect = 1.3e-28
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 1 

Query: 4   GFFERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 63
           GFFERIYFYGKIEHLVKV ANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY
Sbjct: 68  GFFERIYFYGKIEHLVKVFANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 127

Query: 64  YLVNL 69
           YLVNL
Sbjct: 128 YLVNL 132

[Close]
BLAST of Lsi11G009870 vs. NCBI nr
Match: gi|595645580|gb|AHM89037.1| (maturase K (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 133.7 bits (335), Expect = 1.3e-28
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 1 

Query: 4   GFFERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 63
           GFFERIYFYGKIEHLVKV ANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY
Sbjct: 240 GFFERIYFYGKIEHLVKVFANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 299

Query: 64  YLVNL 69
           YLVNL
Sbjct: 300 YLVNL 304

[Close]
BLAST of Lsi11G009870 vs. NCBI nr
Match: gi|253991949|gb|ACT52309.1| (maturase K [Lagenaria sphaerica])

HSP 1 Score: 133.7 bits (335), Expect = 1.3e-28
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 1 

Query: 4   GFFERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 63
           GFFERIYFYGKIEHLVKV ANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY
Sbjct: 70  GFFERIYFYGKIEHLVKVFANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 129

Query: 64  YLVNL 69
           YLVNL
Sbjct: 130 YLVNL 134

[Close]
BLAST of Lsi11G009870 vs. NCBI nr
Match: gi|837370698|gb|AKM94404.1| (maturase K, partial (chloroplast) [Peponium vogelii])

HSP 1 Score: 133.7 bits (335), Expect = 1.3e-28
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 1 

Query: 4  GFFERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 63
          GFFERIYFYGKIEHLVKV ANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY
Sbjct: 32 GFFERIYFYGKIEHLVKVFANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 91

Query: 64 YLVNL 69
          YLVNL
Sbjct: 92 YLVNL 96

[Close]
BLAST of Lsi11G009870 vs. NCBI nr
Match: gi|573016882|gb|AHF72617.1| (maturase K, partial [Lagenaria siceraria])

HSP 1 Score: 133.7 bits (335), Expect = 1.3e-28
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 1 

Query: 4   GFFERIYFYGKIEHLVKVVANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 63
           GFFERIYFYGKIEHLVKV ANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY
Sbjct: 70  GFFERIYFYGKIEHLVKVFANSFSAILRVFKDPFMHYVRYQGKSILVSKDTPLLINKWKY 129

Query: 64  YLVNL 69
           YLVNL
Sbjct: 130 YLVNL 134

The following BLAST results are available for this feature:
BLAST of Lsi11G009870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MATK_CUCSA1.4e-2790.77Maturase K OS=Cucumis sativus GN=matK PE=3 SV=1[more]
MATK_RHACA9.3e-2483.08Maturase K OS=Rhamnus cathartica GN=matK PE=3 SV=1[more]
MATK_HAMVI2.7e-2381.97Maturase K OS=Hamamelis virginiana GN=matK PE=3 SV=1[more]
MATK_HAMMO2.7e-2381.97Maturase K OS=Hamamelis mollis GN=matK PE=3 SV=1[more]
MATK_HAMJA2.7e-2381.97Maturase K OS=Hamamelis japonica GN=matK PE=3 SV=1[more]
BLAST of Lsi11G009870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A140GDQ3_LAGSI8.7e-2998.46Maturase K (Fragment) OS=Lagenaria siceraria GN=matK PE=4 SV=1[more]
C7E4B9_9ROSI8.7e-2998.46Maturase K (Fragment) OS=Lagenaria sphaerica GN=matk PE=4 SV=1[more]
X2F8C9_LAGSI8.7e-2998.46Maturase K OS=Lagenaria siceraria GN=matK PE=3 SV=1[more]
A5X4W2_LAGSI8.7e-2998.46Maturase K (Fragment) OS=Lagenaria siceraria GN=matK PE=4 SV=1[more]
X2F5H9_LAGSI8.7e-2998.46Maturase K OS=Lagenaria siceraria GN=matK PE=3 SV=1[more]
BLAST of Lsi11G009870 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00040.12.7e-2169.84ATCG00040.1 maturase K[more]
BLAST of Lsi11G009870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|156142282|gb|ABU51901.1|1.3e-2898.46maturase K, partial (chloroplast) [Lagenaria sphaerica][more]
gi|595645580|gb|AHM89037.1|1.3e-2898.46maturase K (chloroplast) [Lagenaria siceraria][more]
gi|253991949|gb|ACT52309.1|1.3e-2898.46maturase K [Lagenaria sphaerica][more]
gi|837370698|gb|AKM94404.1|1.3e-2898.46maturase K, partial (chloroplast) [Peponium vogelii][more]
gi|573016882|gb|AHF72617.1|1.3e-2898.46maturase K, partial [Lagenaria siceraria][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR024942Maturase_MatK_N
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006397 mRNA processing
biological_process GO:0008033 tRNA processing
cellular_component GO:0009507 chloroplast
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G009870.1Lsi11G009870.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024942Maturase MatK, N-terminal domainPFAMPF01824MatK_Ncoord: 5..68
score: 2.6
NoneNo IPR availablePANTHERPTHR34811FAMILY NOT NAMEDcoord: 1..68
score: 1.4
NoneNo IPR availablePANTHERPTHR34811:SF1MATURASE Kcoord: 1..68
score: 1.4

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi11G009870Melon (DHL92) v3.6.1lsimedB125
Lsi11G009870Cucumber (Chinese Long) v3cuclsiB108
Lsi11G009870Watermelon (97103) v2lsiwmbB077
Lsi11G009870Watermelon (97103) v2lsiwmbB078
Lsi11G009870Cucumber (Gy14) v1cgylsiB433
Lsi11G009870Cucurbita maxima (Rimu)cmalsiB716
Lsi11G009870Cucurbita moschata (Rifu)cmolsiB703
Lsi11G009870Cucurbita pepo (Zucchini)cpelsiB077
Lsi11G009870Wild cucumber (PI 183967)cpilsiB096
Lsi11G009870Cucumber (Chinese Long) v2culsiB098
Lsi11G009870Melon (DHL92) v3.5.1lsimeB117
Lsi11G009870Watermelon (Charleston Gray)lsiwcgB082
Lsi11G009870Watermelon (Charleston Gray)lsiwcgB088
Lsi11G009870Watermelon (97103) v1lsiwmB113
Lsi11G009870Watermelon (97103) v1lsiwmB119
Lsi11G009870Cucumber (Gy14) v2cgyblsiB089