Lsi06G000630.1 (mRNA) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCCCTCAACAACATAAAAAGCCTCAAAATTTCCAATTCCCACATTATCATCAAACAACGACGGGCGATGGAGATGGGGCGACGATACTCGGGAGTGGCGAGTTGCCGGAGCTCCGGTGGGATTGGGAACATGGGATTGGAAACGATTAAAGAAATCAGATCTCGGAAGGAACGAGTGGTTGAGGCAACGAAATCGTCAAAGAAATCATTGGAAAAATGGTGGAATGATCCAGAGAATAAGAGGAAAAGACGAGTGGCAAAATACAAATTCTATGCTGTGGATGCCAAACTTAAGAATTCCATTAACAAAGGCTTCAAATGGATGAAGAACAAATGTGCTAAAATCATCTCTGGATTTTAA ATGGATTCCCTCAACAACATAAAAAGCCTCAAAATTTCCAATTCCCACATTATCATCAAACAACGACGGGCGATGGAGATGGGGCGACGATACTCGGGAGTGGCGAGTTGCCGGAGCTCCGGTGGGATTGGGAACATGGGATTGGAAACGATTAAAGAAATCAGATCTCGGAAGGAACGAGTGGTTGAGGCAACGAAATCGTCAAAGAAATCATTGGAAAAATGGTGGAATGATCCAGAGAATAAGAGGAAAAGACGAGTGGCAAAATACAAATTCTATGCTGTGGATGCCAAACTTAAGAATTCCATTAACAAAGGCTTCAAATGGATGAAGAACAAATGTGCTAAAATCATCTCTGGATTTTAA ATGGATTCCCTCAACAACATAAAAAGCCTCAAAATTTCCAATTCCCACATTATCATCAAACAACGACGGGCGATGGAGATGGGGCGACGATACTCGGGAGTGGCGAGTTGCCGGAGCTCCGGTGGGATTGGGAACATGGGATTGGAAACGATTAAAGAAATCAGATCTCGGAAGGAACGAGTGGTTGAGGCAACGAAATCGTCAAAGAAATCATTGGAAAAATGGTGGAATGATCCAGAGAATAAGAGGAAAAGACGAGTGGCAAAATACAAATTCTATGCTGTGGATGCCAAACTTAAGAATTCCATTAACAAAGGCTTCAAATGGATGAAGAACAAATGTGCTAAAATCATCTCTGGATTTTAA MDSLNNIKSLKISNSHIIIKQRRAMEMGRRYSGVASCRSSGGIGNMGLETIKEIRSRKERVVEATKSSKKSLEKWWNDPENKRKRRVAKYKFYAVDAKLKNSINKGFKWMKNKCAKIISGF
BLAST of Lsi06G000630.1 vs. TrEMBL
Match: A0A0A0LYX3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G561970 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 8.3e-14 Identity = 67/129 (51.94%), Postives = 80/129 (62.02%), Query Frame = 1
BLAST of Lsi06G000630.1 vs. TrEMBL
Match: A0A151TW82_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_010537 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.3e-11 Identity = 32/45 (71.11%), Postives = 38/45 (84.44%), Query Frame = 1
BLAST of Lsi06G000630.1 vs. TrEMBL
Match: A0A072U413_MEDTR (DUF3511 domain protein OS=Medicago truncatula GN=MTR_7g112020 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 3.8e-11 Identity = 35/63 (55.56%), Postives = 43/63 (68.25%), Query Frame = 1
BLAST of Lsi06G000630.1 vs. TrEMBL
Match: M4FHE8_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.5e-10 Identity = 33/54 (61.11%), Postives = 42/54 (77.78%), Query Frame = 1
BLAST of Lsi06G000630.1 vs. TrEMBL
Match: A0A078G1D4_BRANA (BnaAnng02720D protein OS=Brassica napus GN=BnaAnng02720D PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.5e-10 Identity = 33/54 (61.11%), Postives = 42/54 (77.78%), Query Frame = 1
BLAST of Lsi06G000630.1 vs. TAIR10
Match: AT3G05725.1 (AT3G05725.1 Protein of unknown function (DUF3511)) HSP 1 Score: 67.8 bits (164), Expect = 5.3e-12 Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 1
BLAST of Lsi06G000630.1 vs. TAIR10
Match: AT2G47480.1 (AT2G47480.1 Protein of unknown function (DUF3511)) HSP 1 Score: 53.1 bits (126), Expect = 1.4e-07 Identity = 33/104 (31.73%), Postives = 50/104 (48.08%), Query Frame = 1
BLAST of Lsi06G000630.1 vs. TAIR10
Match: AT2G19460.1 (AT2G19460.1 Protein of unknown function (DUF3511)) HSP 1 Score: 50.8 bits (120), Expect = 6.7e-07 Identity = 24/56 (42.86%), Postives = 35/56 (62.50%), Query Frame = 1
BLAST of Lsi06G000630.1 vs. TAIR10
Match: AT3G62640.1 (AT3G62640.1 Protein of unknown function (DUF3511)) HSP 1 Score: 50.1 bits (118), Expect = 1.1e-06 Identity = 21/43 (48.84%), Postives = 33/43 (76.74%), Query Frame = 1
BLAST of Lsi06G000630.1 vs. TAIR10
Match: AT3G13910.1 (AT3G13910.1 Protein of unknown function (DUF3511)) HSP 1 Score: 49.3 bits (116), Expect = 2.0e-06 Identity = 25/56 (44.64%), Postives = 39/56 (69.64%), Query Frame = 1
BLAST of Lsi06G000630.1 vs. NCBI nr
Match: gi|700210921|gb|KGN66017.1| (hypothetical protein Csa_1G561970 [Cucumis sativus]) HSP 1 Score: 84.7 bits (208), Expect = 1.2e-13 Identity = 67/129 (51.94%), Postives = 80/129 (62.02%), Query Frame = 1
BLAST of Lsi06G000630.1 vs. NCBI nr
Match: gi|1012360102|gb|KYP71286.1| (hypothetical protein KK1_010537 [Cajanus cajan]) HSP 1 Score: 77.4 bits (189), Expect = 1.9e-11 Identity = 32/45 (71.11%), Postives = 38/45 (84.44%), Query Frame = 1
BLAST of Lsi06G000630.1 vs. NCBI nr
Match: gi|659126920|ref|XP_008463430.1| (PREDICTED: uncharacterized protein LOC103501594 [Cucumis melo]) HSP 1 Score: 76.6 bits (187), Expect = 3.2e-11 Identity = 35/63 (55.56%), Postives = 46/63 (73.02%), Query Frame = 1
BLAST of Lsi06G000630.1 vs. NCBI nr
Match: gi|922347079|ref|XP_013450451.1| (DUF3511 domain protein [Medicago truncatula]) HSP 1 Score: 75.9 bits (185), Expect = 5.5e-11 Identity = 35/63 (55.56%), Postives = 43/63 (68.25%), Query Frame = 1
BLAST of Lsi06G000630.1 vs. NCBI nr
Match: gi|729365021|ref|XP_010546758.1| (PREDICTED: uncharacterized protein LOC104818741 [Tarenaya hassleriana]) HSP 1 Score: 73.9 bits (180), Expect = 2.1e-10 Identity = 30/58 (51.72%), Postives = 45/58 (77.59%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
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