Lsi08G015660.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi08G015660.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	EARLY FLOWERING 3
Location	chr08 : 23716518 .. 23718716 (+)
Sequence length	1209

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCGTATGAAGGAGTTCAGGAGCATTCGTTGGAGGATATTTTGACAGTACAGAACTTCTTTAGATTTAGTAGAATCGATTTTATGGATGAAAGTAGTGTTCTTTTTAGATCTTTCCCTTCCACCACTTAAGAAGAGTATATTTGCTAGCTTGTCTTGTTATTACCATGCTTTTCGATCAAGGGGAAAAAAAAAGAAAAAAAAGAAAGAAAGAAAAGGACTCTTGTTTTACCAATGAATGTCACATTTATTCTGTGCATTACGTCTCCTTTTGATTGATTTTACTTGCTGATGGGGTTAATAGATGAAGGCCTAGTTGACTGTTTGAAAACCCTGATTTTTCTGTTCATTGATCATGTGTTGAGATTTTTTGTTGTAATGTATTAGGGCAGTTTGTTTGGAGCATGTCTAGCATTGGAAGAATTAAATTTTTATGCTTATCTGTATTTATTCATATTCACAAGCGTTTCATTCCTTTAAGCATTTCTTATTTGTACTAAACATTAACTAGATCCCTGAAGAAAGTGATTAACTAGATCCCTGAAGAAAGTGATTCGATACTTGCACATTAAAAAGCATTGTATGTGGATGTCATATACTCCAATTAGGTATGGTTACCTTCAATTATAGAGAGCATTATGGCTGTGATGGAAGCAAATTTAATTAGAGAGAGTTTTAAGGTTGTGATGACGTTGAGAGGTTAGTGAATCTTGTGGTTGAATAGGGTACCTAGAATGTTGAAATCAGTGCAGGTCTTATAGATAATAACTGTATGTAGCAAGATTGTTAAACCCTAATAGAAGATTTAAGGTTGTGTCCTGCAATCAGGCTAGTTGAGCTACCTTGCAAATGGTTAGTTCAGTGCTAAGGTTGTGACGGCTTGTTATGCAGGCAACTACTTTAACATGATGTTTATGAGTGCTGATTCTGTTTCAATGCTATGAATGGATTGTTGTTATTAGCTACAAAATGCGTTGCGGTTTGATTTCACTCATGATGTTATGTGATTTATTCTTTGAACTTTTATTACTCTGCAGTCAACAGAGAGTGTTTGAGGTCCAAGTGTTCGAGTTGCATAGACTTATCAAGGTAAACTGATCTAATTTCTTCAATTAGCCGCCTTTGTGCCCTGAAGTTCACATTATTGATTCACCTCTCTCTCTCTCTAACTGATCTATCATGCAAACAGGTCCAACGGTTAATTGCTGGATCACCTCATCTGTTACTTGAAGATGGTATTTTTCTGGATAATTCTTCTCCTAGCCCACTTCCTGCAAAGAAACTTAGGTCAGACTACACTGTCAAATCACATGTGCAACTTCAGCTCAGTGATGACCCTAAGAAGCCAAAAGACAATGTGGAATGTTCAGCAGAAAATGCTGTTGGGAAGACATCTCTACCTCCTGCGCCAATTAATTGCCAGCCTTCAACCAATGGGCCTTACTCAGTAAATCCACAACCAACTCCTGTTTCTTCTGATAATAAATTAAACAGTTGGTACCAGACATCAGCACATCACTGGTTGGTCCCTGTAATGTCTCCTTCTGAAGGACTCATATATAAGCCTTACCCTGGGCCTGGATTTATTTATGGAGGATGTGGACCTTATGGATCAATGGCTCCAATGATGAACCCATCCTATGGATTTCCAGCTTCTGTTCATCAAGGAATTGGAGCTCTTCCTAGCACTCCCATGGTTGGTACTTACTTCCCCCCTTATGGCATGCCAGTCATGAATCCCGGTCTGTCAGGTTTGGCTGTTGATCAGGTTAACTGGTACACAGGAGATCCGAATCAATTATCGGGAGGCGTGGCCGCTTCCAATATGCAGCATCAAACTTCATATGATGTTTCAACACAGAGAGATAGAGATGAAAATCAAACTGTTTCACAAACTGCTAAGTCTCAAGCACCCAAAAGGAATGAGGTACAAGTAAGTACTGCAAGCAGTCCTGTAACTAGTCCTGCTAGCAAAGTGCAAGGAAATAAGGCCAATCGTACTGCAGAAAGCCATGACGTGCTTCCACTTTTCCCTGTAGCTCTGCCAGTTGTAGAGGAAGGTCCTCAACCTTCAGACTCTGACCAAACAAAACGCGTGATTCGAGTTGTGCCACACAATCGAAGATCTGCAAATGAATCAGCTGCACGAATTTTCCAATCTATTCAAAATGAGAGAAAACAGTATGACTCAATTTAG

mRNA sequence

ATGGAGCAGAGCATTATGGCTGTGATGGAAGCAAATTTAATTAGAGAGAGTTTTAAGGTTGTGATGACGTTGAGAGTCAACAGAGAGTGTTTGAGGTCCAAGTGTTCGAGTTGCATAGACTTATCAAGCCGCCTTTGTGCCCTGAAGTTCACATTATTGATTCACCTCTCTCTCTCTCTAACTGATCTATCATGCAAACAGGTCCAACGGTTAATTGCTGGATCACCTCATCTGTTACTTGAAGATGGTATTTTTCTGGATAATTCTTCTCCTAGCCCACTTCCTGCAAAGAAACTTAGGTCAGACTACACTGTCAAATCACATGTGCAACTTCAGCTCAGTGATGACCCTAAGAAGCCAAAAGACAATGTGGAATGTTCAGCAGAAAATGCTGTTGGGAAGACATCTCTACCTCCTGCGCCAATTAATTGCCAGCCTTCAACCAATGGGCCTTACTCAGTAAATCCACAACCAACTCCTGTTTCTTCTGATAATAAATTAAACAGTTGGTACCAGACATCAGCACATCACTGGTTGGTCCCTGTAATGTCTCCTTCTGAAGGACTCATATATAAGCCTTACCCTGGGCCTGGATTTATTTATGGAGGATGTGGACCTTATGGATCAATGGCTCCAATGATGAACCCATCCTATGGATTTCCAGCTTCTGTTCATCAAGGAATTGGAGCTCTTCCTAGCACTCCCATGGTTGGTACTTACTTCCCCCCTTATGGCATGCCAGTCATGAATCCCGGTCTGTCAGGTTTGGCTGTTGATCAGGTTAACTGGTACACAGGAGATCCGAATCAATTATCGGGAGGCGTGGCCGCTTCCAATATGCAGCATCAAACTTCATATGATGTTTCAACACAGAGAGATAGAGATGAAAATCAAACTGTTTCACAAACTGCTAAGTCTCAAGCACCCAAAAGGAATGAGGTACAAGTAAGTACTGCAAGCAGTCCTGTAACTAGTCCTGCTAGCAAAGTGCAAGGAAATAAGGCCAATCGTACTGCAGAAAGCCATGACGTGCTTCCACTTTTCCCTGTAGCTCTGCCAGTTGTAGAGGAAGGTCCTCAACCTTCAGACTCTGACCAAACAAAACGCGTGATTCGAGTTGTGCCACACAATCGAAGATCTGCAAATGAATCAGCTGCACGAATTTTCCAATCTATTCAAAATGAGAGAAAACAGTATGACTCAATTTAG

Coding sequence (CDS)

ATGGAGCAGAGCATTATGGCTGTGATGGAAGCAAATTTAATTAGAGAGAGTTTTAAGGTTGTGATGACGTTGAGAGTCAACAGAGAGTGTTTGAGGTCCAAGTGTTCGAGTTGCATAGACTTATCAAGCCGCCTTTGTGCCCTGAAGTTCACATTATTGATTCACCTCTCTCTCTCTCTAACTGATCTATCATGCAAACAGGTCCAACGGTTAATTGCTGGATCACCTCATCTGTTACTTGAAGATGGTATTTTTCTGGATAATTCTTCTCCTAGCCCACTTCCTGCAAAGAAACTTAGGTCAGACTACACTGTCAAATCACATGTGCAACTTCAGCTCAGTGATGACCCTAAGAAGCCAAAAGACAATGTGGAATGTTCAGCAGAAAATGCTGTTGGGAAGACATCTCTACCTCCTGCGCCAATTAATTGCCAGCCTTCAACCAATGGGCCTTACTCAGTAAATCCACAACCAACTCCTGTTTCTTCTGATAATAAATTAAACAGTTGGTACCAGACATCAGCACATCACTGGTTGGTCCCTGTAATGTCTCCTTCTGAAGGACTCATATATAAGCCTTACCCTGGGCCTGGATTTATTTATGGAGGATGTGGACCTTATGGATCAATGGCTCCAATGATGAACCCATCCTATGGATTTCCAGCTTCTGTTCATCAAGGAATTGGAGCTCTTCCTAGCACTCCCATGGTTGGTACTTACTTCCCCCCTTATGGCATGCCAGTCATGAATCCCGGTCTGTCAGGTTTGGCTGTTGATCAGGTTAACTGGTACACAGGAGATCCGAATCAATTATCGGGAGGCGTGGCCGCTTCCAATATGCAGCATCAAACTTCATATGATGTTTCAACACAGAGAGATAGAGATGAAAATCAAACTGTTTCACAAACTGCTAAGTCTCAAGCACCCAAAAGGAATGAGGTACAAGTAAGTACTGCAAGCAGTCCTGTAACTAGTCCTGCTAGCAAAGTGCAAGGAAATAAGGCCAATCGTACTGCAGAAAGCCATGACGTGCTTCCACTTTTCCCTGTAGCTCTGCCAGTTGTAGAGGAAGGTCCTCAACCTTCAGACTCTGACCAAACAAAACGCGTGATTCGAGTTGTGCCACACAATCGAAGATCTGCAAATGAATCAGCTGCACGAATTTTCCAATCTATTCAAAATGAGAGAAAACAGTATGACTCAATTTAG

Protein sequence

MEQSIMAVMEANLIRESFKVVMTLRVNRECLRSKCSSCIDLSSRLCALKFTLLIHLSLSLTDLSCKQVQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLRSDYTVKSHVQLQLSDDPKKPKDNVECSAENAVGKTSLPPAPINCQPSTNGPYSVNPQPTPVSSDNKLNSWYQTSAHHWLVPVMSPSEGLIYKPYPGPGFIYGGCGPYGSMAPMMNPSYGFPASVHQGIGALPSTPMVGTYFPPYGMPVMNPGLSGLAVDQVNWYTGDPNQLSGGVAASNMQHQTSYDVSTQRDRDENQTVSQTAKSQAPKRNEVQVSTASSPVTSPASKVQGNKANRTAESHDVLPLFPVALPVVEEGPQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNERKQYDSI

Homology

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BLAST of Lsi08G015660.1 vs. Swiss-Prot
Match: ELF3_ARATH (Protein EARLY FLOWERING 3 OS=Arabidopsis thaliana GN=ELF3 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 5.1e-29
Identity = 134/363 (36.91%), Postives = 173/363 (47.66%), Query Frame = 1


Query: 67  QVQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLR-SDYTVKS---HVQL-QLSDDPKKPK 126
           +VQ+LIA SP LLL++  FL   S    P KKL  S++ VK    HV + Q  D  K  +
Sbjct: 356 KVQKLIAASPDLLLDEISFLGKVSAKSYPVKKLLPSEFLVKPPLPHVVVKQRGDSEKTDQ 415

Query: 127 DNVECSAENAVGKTSLPPAPINCQPSTNGPYSVNPQPTPVSSDNKLNSWYQTSAHH--WL 186
             +E SAEN VG+ S      + Q S   P++ NP  +P  +          S +H  WL
Sbjct: 416 HKMESSAENVVGRLSNQG---HHQQSNYMPFANNPPASPAPNGYCFPPQPPPSGNHQQWL 475

Query: 187 VPVMSPSEGLIYKPYPGPGFI--YGGCGPYGSMAPMMNPSYGFPASVHQGIGALPSTPMV 246
           +PVMSPSEGLIYKP+PG      YGG   +    PM+ P Y      H G+G  P  P  
Sbjct: 476 IPVMSPSEGLIYKPHPGMAHTGHYGGYYGHYMPTPMVMPQY------HPGMGFPP--PGN 535

Query: 247 GTYFPPYGM--PVMNPGLSGLAVDQVNWYTGDPN-QLSGGVAASNMQHQTSYDVSTQRDR 306
           G YFPPYGM   +MNP  S     Q       PN Q++      N+Q+        Q+ R
Sbjct: 536 G-YFPPYGMMPTIMNPYCSSQQQQQQQ-----PNEQMNQFGHPGNLQN-----TQQQQQR 595

Query: 307 DEN----QTVSQTAKSQAPKRNEVQVSTASSPVTSPASKVQGNKANR------------T 366
            +N    Q   Q  KS    R   Q ST SSP  S    + G+K+ R             
Sbjct: 596 SDNEPAPQQQQQPTKSYPRARKSRQGSTGSSP--SGPQGISGSKSFRPFAAVDEDSNINN 655

Query: 367 AESHDVLPLFPVALPVVEEGPQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNERKQ 402
           A    +          V +  +  D     RVI+VVPHN + A+E+AARIFQSIQ ERK+
Sbjct: 656 APEQTMTTTTTTTRTTVTQTTR--DGGGVTRVIKVVPHNAKLASENAARIFQSIQEERKR 692

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BLAST of Lsi08G015660.1 vs. TrEMBL
Match: A0A0A0LNN2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G352370 PE=4 SV=1)

HSP 1 Score: 615.5 bits (1586), Expect = 4.5e-173
Identity = 311/337 (92.28%), Postives = 323/337 (95.85%), Query Frame = 1


Query: 67  QVQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLRSDYTVKSHVQLQLSDDPKKPKDNVEC 126
           +VQRLIAGSPHLLLEDG+FLDNSSPSPLPAKKLRSDYTVKSHVQLQ SDDPKKPK NVEC
Sbjct: 381 KVQRLIAGSPHLLLEDGVFLDNSSPSPLPAKKLRSDYTVKSHVQLQPSDDPKKPKHNVEC 440

Query: 127 SAENAVGKTSLPPAPINCQPSTNGPYSVNPQPTPVSSDNKLNSWYQTSAHHWLVPVMSPS 186
           SAENAVGKTSLP  PINCQPSTNGPYSVNPQPT VSSDNKL+SWYQTSAHHWLVPVMSPS
Sbjct: 441 SAENAVGKTSLPLEPINCQPSTNGPYSVNPQPTSVSSDNKLSSWYQTSAHHWLVPVMSPS 500

Query: 187 EGLIYKPYPGPGFIYGGCGPYGSMAPMMNPSYGFPASVHQGIGALPSTPMV-GTYFPPYG 246
           EGLIYKPYPGPGFIYGGCGPYG MAPMMNPSYGFPASVHQGIGALP+TPMV G++FPPYG
Sbjct: 501 EGLIYKPYPGPGFIYGGCGPYGPMAPMMNPSYGFPASVHQGIGALPTTPMVGGSFFPPYG 560

Query: 247 MPVMNPGLSGLAVDQVNWYTGDPNQLSGGVAASNMQHQTSYDVSTQRDRDENQTVSQTAK 306
           MPVMNPG+SG AVDQVNWYTGDPNQLSGGVAASN+QHQTSYDVSTQRDRDENQTVS+TAK
Sbjct: 561 MPVMNPGMSGFAVDQVNWYTGDPNQLSGGVAASNIQHQTSYDVSTQRDRDENQTVSRTAK 620

Query: 307 SQAPKRNEVQVSTASSPVTSPASKVQGNKANRTAESHDVLPLFPVALPVVEEGPQPSDSD 366
           SQAPKR+EVQVSTASSPV SP SKVQGNK NRTAESH+VL LFPVA P+VEEGPQPSDSD
Sbjct: 621 SQAPKRSEVQVSTASSPVCSPTSKVQGNKVNRTAESHNVLSLFPVAQPLVEEGPQPSDSD 680

Query: 367 QTKRVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 403
           QT RVIRVVPHNRRSANESAARIFQSIQNERKQYDSI
Sbjct: 681 QT-RVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 716

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BLAST of Lsi08G015660.1 vs. TrEMBL
Match: A0A061GJX7_THECC (Hydroxyproline-rich glycoprotein family protein, putative OS=Theobroma cacao GN=TCM_037249 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 3.5e-85
Identity = 191/351 (54.42%), Postives = 226/351 (64.39%), Query Frame = 1


Query: 67  QVQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLRSDYTVKSHVQLQLSDDPKKPKDNVEC 126
           +VQRLIAGSPH+LLED  +L   S    PAKKL  ++ VK     +  DD +KP   +EC
Sbjct: 373 KVQRLIAGSPHILLEDTAYLSKPSFQGSPAKKLPPEFIVKPLPHTKCKDDTEKPSHKMEC 432

Query: 127 SAENAVGKTSLPPAPINCQPSTNGPYSVNPQPTPVSSDNKLNSW--YQTSAHHWLVPVMS 186
           SAENAVG+TSL       QPS  GP+  NP P PV+ DNK+N W  +Q   H WLVPVMS
Sbjct: 433 SAENAVGRTSLSSVKNGSQPSNYGPFLGNPPPAPVNGDNKMNPWCFHQMPGHQWLVPVMS 492

Query: 187 PSEGLIYKPYPGPGF---IYGGCGPYGSMAPM----MNPSYGFPASVHQGIGALPSTPMV 246
           PSEGLIYKPY GPGF   I GGCGP+G   PM    M  +YG  A  HQGIG LP  P V
Sbjct: 493 PSEGLIYKPYTGPGFMGSICGGCGPFG-QTPMTGNFMTSAYGVAAPPHQGIGVLPGAPPV 552

Query: 247 G-TYFPPYGMPVMNPGLSGLAVDQVNWYTGDPN-----QLSGGVAASNMQHQTSYDVSTQ 306
           G +YFPPYGMPVMNP +SG AV+Q+N + G  +     Q SGG A  NMQHQ S ++ ++
Sbjct: 553 GHSYFPPYGMPVMNPAVSGSAVEQMNQFAGPGSYAHNGQFSGGGANFNMQHQNSCNLPSE 612

Query: 307 RDRDENQTVSQTAKSQAPKRNEVQVSTASSPVTSPASKVQGNKANRTAESHDVLPLFPVA 366
           +    N  +S   K QA K  E+Q STAS    SP  +VQ +     AE  + LPLF  A
Sbjct: 613 K----NGAISHVMKFQASKDTELQGSTAS----SPGERVQRDGTRSAAEGKNALPLFRTA 672

Query: 367 LPVVEEGPQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 403
             ++E  PQP DS+QT RVIRVVPHN RSA ESAARIFQSIQ ERKQYDS+
Sbjct: 673 PTILEGAPQPHDSEQTTRVIRVVPHNPRSATESAARIFQSIQEERKQYDSV 714

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BLAST of Lsi08G015660.1 vs. TrEMBL
Match: M5XAQ9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002858mg PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 2.5e-75
Identity = 182/354 (51.41%), Postives = 228/354 (64.41%), Query Frame = 1


Query: 67  QVQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLRSDYTVKSHVQL-QLSDDPKKPKDNVE 126
           +VQRLIAGSP+LLLED  FL  SS    PAKKL S+Y VK  +++ +   +P+KP + +E
Sbjct: 284 KVQRLIAGSPNLLLEDTAFLGTSSLRGSPAKKLSSEYVVKPLLRVVKRKHEPEKPNNKIE 343

Query: 127 CSAENAVGKTSLPPAPINCQPSTNGPYSVNPQPTPVSSDNKLNSW--YQTSAHHWLVPVM 186
           CSAENAVGKTSL       Q S  GPY  NPQPTPV +DNK + W  +Q+  H  L+PVM
Sbjct: 344 CSAENAVGKTSLSSVKNGSQTSNYGPYVGNPQPTPVGTDNKASPWCFHQSPGHQLLIPVM 403

Query: 187 SPSEGLIYKPYPGPGF---IYGGCGPYGSMAPM----MNPSYGFPAS-VHQGIGALPSTP 246
           SPSEGL+YKPY GPGF   + GGCGP+ S  PM    + P+YG PAS  HQG G LP+ P
Sbjct: 404 SPSEGLVYKPYHGPGFMGPVCGGCGPFNS-TPMTGNFVKPNYGVPASHHHQGTGVLPAPP 463

Query: 247 MVG-TYFPPYGMPVMNPGLSGLAVDQVNWYT-----GDPNQLSGGVAASNMQHQTSYDVS 306
            +G TYFPPYGM VMNP +    ++Q++W+      G  +QLSGG   SN+QHQ+S ++ 
Sbjct: 464 PLGHTYFPPYGMSVMNPAMPSSGIEQMHWFAGPGSHGQIDQLSGGGTNSNVQHQSSCNMP 523

Query: 307 TQRDRDENQTVSQTAKSQAPKRNEVQVSTASSPVTSPASKVQGNKANRTAESHDVLPLFP 366
           +Q+    +  +      QA   +E+Q STA+SP  +       N     AE  D L LFP
Sbjct: 524 SQK----SGAIPHAMMFQASNDSELQGSTANSPGDTARLGTDQN-----AEGSDALQLFP 583

Query: 367 VALPVVEEG-PQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 403
           +A PV+ EG  QP DS Q  R IRVVPHN R+A  SAARIFQSIQ ERKQ+DSI
Sbjct: 584 MA-PVIPEGVAQPHDSGQPTRAIRVVPHNPRTATASAARIFQSIQEERKQHDSI 626

[Close]

BLAST of Lsi08G015660.1 vs. TrEMBL
Match: A0A067KDC6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07703 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 4.0e-73
Identity = 178/353 (50.42%), Postives = 223/353 (63.17%), Query Frame = 1


Query: 67  QVQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLRSDYTVKSHVQL-QLSDDPKKPKDNVE 126
           +VQRLIA SP LLLEDG +L        PAKKL  ++ V   V + +  D P+KP   +E
Sbjct: 378 KVQRLIAASPDLLLEDGTYLGTPPTKVSPAKKLPPEFVVSPPVHVAKRKDYPEKPNHKME 437

Query: 127 CSAENAVGKTSLPPAPINCQPSTNGPYSVNPQPTPVSSDNKLNSW-YQTS-AHHWLVPVM 186
           CSAENA+GKTS   A    QPS NG Y  NP P PV +D+K++ W +Q S  H WLVPVM
Sbjct: 438 CSAENAIGKTSFSSAKNGSQPSNNGSYLGNPPPVPVPTDSKMSPWCFQHSLGHQWLVPVM 497

Query: 187 SPSEGLIYKPYPGPGFI---YGGCGPYGSMAPM----MNPSYGFPASV--HQGIGALPST 246
           SPSEGL+YKPY  PGF+    GGCGP+G+ +PM    +NP+YG P S   HQG G +P  
Sbjct: 498 SPSEGLVYKPYNAPGFLGSACGGCGPFGA-SPMVGNFINPTYGIPPSSHHHQGTGFIPG- 557

Query: 247 PMVGTYFPPYGMPVMNPGLSGLAVDQVNWY-----TGDPNQLSGGVAASNMQHQTSYDVS 306
             V  YFPPYGMPVM+P +SG AV+Q+N++     TG   Q+SGG A  N+QHQ+S ++ 
Sbjct: 558 --VHGYFPPYGMPVMHPAMSGSAVEQMNYFAGAGSTGQTGQVSGGGANFNVQHQSSCNLP 617

Query: 307 TQRDRDENQTVSQTAKSQAPKRNEVQVSTASSPVTSPASKVQGNKANRTAESHDVLPLFP 366
            Q+    + +V Q  K +A K  E++ STAS    SP  +VQG      AE  D L LFP
Sbjct: 618 NQK----SGSVPQVPKFRASKDTELRGSTAS----SPGERVQGVGTVEAAEGRDALLLFP 677

Query: 367 VALPVVEEGPQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 403
           VA    E   QP ++D   RVI+VVPHN RSA ESAARIF+SIQ ERK  +SI
Sbjct: 678 VAPATPEGASQPQETDMPTRVIKVVPHNPRSATESAARIFKSIQAERKHKNSI 718

[Close]

BLAST of Lsi08G015660.1 vs. TrEMBL
Match: A0A088PY80_9ROSI (EARLY FLOWERING 3 OS=Dimocarpus longan PE=2 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.5e-72
Identity = 176/354 (49.72%), Postives = 220/354 (62.15%), Query Frame = 1


Query: 67  QVQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLRSDYTVKS--HVQLQLSDDPKKPKDNV 126
           +VQ+LIAGSP LLLED  +L  +S +  PAKK  S+Y VK   H+ ++  DD +KPK N+
Sbjct: 382 KVQQLIAGSPQLLLEDSAYLGKASLNSSPAKKFPSEYVVKPLPHI-VKRKDDFEKPKHNM 441

Query: 127 ECSAENAVGKTSLPPAPINCQPSTNGPYSVNPQPTPVSSDNKLNSWY--QTSAHHWLVPV 186
           ECSAENAVGK S+       QPS  G Y  NP    V+SD+++  WY  Q+    WL+PV
Sbjct: 442 ECSAENAVGKMSVSSVKNGSQPSNYGSYLANPPAASVASDSRMAPWYFHQSPGQQWLIPV 501

Query: 187 MSPSEGLIYKPYPGPGFIY----GGCGPYGSM---APMMNPSYGFPAS-VHQGIGALPST 246
           MSPSEGLIYKPYPGPGF+     GGCGP+G        M+P+YG PA   HQGIGA+P  
Sbjct: 502 MSPSEGLIYKPYPGPGFMGPVCGGGCGPFGPTPIPGNFMHPAYGVPAPHTHQGIGAMPGA 561

Query: 247 PMVGT-YFPPYGMPVMNPGLSGLAVDQVNWYTGDPNQL-----SGGVAASNMQHQTSYDV 306
             VG  YFPPYGMP+MN  +S  A +Q N   G  + L     SGG A  N+QH++S +V
Sbjct: 562 HPVGHGYFPPYGMPIMNQSVSSSAAEQKNQSAGPGSLLQNGLLSGGGANFNVQHESSCNV 621

Query: 307 STQRDRDENQTVSQTAKSQAPKRNEVQVSTASSPVTSPASKVQGNKANRTAESHDVLPLF 366
            TQ+       + Q  + QA K  +VQ STASS       ++Q ++   TAE  +  P F
Sbjct: 622 PTQK----KGAIPQAMQFQASKDMDVQGSTASST----GERMQHDETGATAEGQEAQPHF 681

Query: 367 PVALPVVEEGPQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 403
            +A    +  PQP D++Q  RVIRVVPHN RSA ES ARIFQSIQ ERKQYDSI
Sbjct: 682 SMASVPPQGAPQPQDTEQPTRVIRVVPHNPRSATESVARIFQSIQEERKQYDSI 726

[Close]

BLAST of Lsi08G015660.1 vs. TAIR10
Match: AT2G25930.1 (AT2G25930.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 130.2 bits (326), Expect = 2.9e-30
Identity = 134/363 (36.91%), Postives = 173/363 (47.66%), Query Frame = 1


Query: 67  QVQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLR-SDYTVKS---HVQL-QLSDDPKKPK 126
           +VQ+LIA SP LLL++  FL   S    P KKL  S++ VK    HV + Q  D  K  +
Sbjct: 356 KVQKLIAASPDLLLDEISFLGKVSAKSYPVKKLLPSEFLVKPPLPHVVVKQRGDSEKTDQ 415

Query: 127 DNVECSAENAVGKTSLPPAPINCQPSTNGPYSVNPQPTPVSSDNKLNSWYQTSAHH--WL 186
             +E SAEN VG+ S      + Q S   P++ NP  +P  +          S +H  WL
Sbjct: 416 HKMESSAENVVGRLSNQG---HHQQSNYMPFANNPPASPAPNGYCFPPQPPPSGNHQQWL 475

Query: 187 VPVMSPSEGLIYKPYPGPGFI--YGGCGPYGSMAPMMNPSYGFPASVHQGIGALPSTPMV 246
           +PVMSPSEGLIYKP+PG      YGG   +    PM+ P Y      H G+G  P  P  
Sbjct: 476 IPVMSPSEGLIYKPHPGMAHTGHYGGYYGHYMPTPMVMPQY------HPGMGFPP--PGN 535

Query: 247 GTYFPPYGM--PVMNPGLSGLAVDQVNWYTGDPN-QLSGGVAASNMQHQTSYDVSTQRDR 306
           G YFPPYGM   +MNP  S     Q       PN Q++      N+Q+        Q+ R
Sbjct: 536 G-YFPPYGMMPTIMNPYCSSQQQQQQQ-----PNEQMNQFGHPGNLQN-----TQQQQQR 595

Query: 307 DEN----QTVSQTAKSQAPKRNEVQVSTASSPVTSPASKVQGNKANR------------T 366
            +N    Q   Q  KS    R   Q ST SSP  S    + G+K+ R             
Sbjct: 596 SDNEPAPQQQQQPTKSYPRARKSRQGSTGSSP--SGPQGISGSKSFRPFAAVDEDSNINN 655

Query: 367 AESHDVLPLFPVALPVVEEGPQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNERKQ 402
           A    +          V +  +  D     RVI+VVPHN + A+E+AARIFQSIQ ERK+
Sbjct: 656 APEQTMTTTTTTTRTTVTQTTR--DGGGVTRVIKVVPHNAKLASENAARIFQSIQEERKR 692

[Close]

BLAST of Lsi08G015660.1 vs. TAIR10
Match: AT3G21320.1 (AT3G21320.1 BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT2G25930.1))

HSP 1 Score: 67.0 bits (162), Expect = 3.0e-11
Identity = 95/335 (28.36%), Postives = 133/335 (39.70%), Query Frame = 1


Query: 68  VQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLRSDYTVKSHVQLQLSDDPKKPKDNVECS 127
           VQ+++A SP+L LE       S  + +    +RS     SH     +   +KP      +
Sbjct: 278 VQKMVAKSPNLFLE-------SKLNGVKHGTMRS-----SHQLAMAASKVRKP------N 337

Query: 128 AENAVGKTSLPPAPINCQPSTNGPYSVNPQPTPVSSDNKLNSWYQTSAHHWLVPVMSPSE 187
            EN   K      P + +P    P       TP+     L        + WLVPV++ S+
Sbjct: 338 TENH--KPVPEEYPEHMKPKLPLPSISKELVTPIWPQQLL----PPPGNQWLVPVITDSD 397

Query: 188 GLIYKPYPGPGFIYGGCGPYGSMAPMMNPSYGFPASVHQGIGALPSTPMVGTYFPPYGMP 247
           GL+YKP+PGP      C P  S +  M P YG  +           TP       P+   
Sbjct: 398 GLVYKPFPGP------CPP--SSSAFMVPVYGQDSL---------ETPFRFPVSSPFSHS 457

Query: 248 VMNPGLSGLAVDQVNWYTGDPNQLSGGVAASNMQHQTSYDVSTQRDRDENQTVSQTAKSQ 307
              P  +   VDQ N + G   + S    +S+M     + +                KSQ
Sbjct: 458 YFPPPNARTTVDQTNPF-GQFQRWSN--TSSHMTQAIPFSLK---------------KSQ 517

Query: 308 APKRNEVQVSTASSPVTSPASKVQGNKANRTAESH--DVLPLFPVALPVVEEGPQPSDSD 367
               +++  STASSP                 E H  +VLPLFP   P  +         
Sbjct: 518 ESNDSDIHGSTASSP----------------PEKHKLEVLPLFPTE-PTHQTDEYKQKQQ 536

Query: 368 QTKRVIRVVPHNRRSANESAARIFQSIQNERKQYD 401
              R I+ VPHN  SA+ESAARIF+ IQ ER+  D
Sbjct: 578 PMLRAIKAVPHNSTSASESAARIFRFIQEERRDSD 536

[Close]

BLAST of Lsi08G015660.1 vs. NCBI nr
Match: gi|449450572|ref|XP_004143036.1| (PREDICTED: protein EARLY FLOWERING 3 [Cucumis sativus])

HSP 1 Score: 615.5 bits (1586), Expect = 6.4e-173
Identity = 311/337 (92.28%), Postives = 323/337 (95.85%), Query Frame = 1


Query: 67  QVQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLRSDYTVKSHVQLQLSDDPKKPKDNVEC 126
           +VQRLIAGSPHLLLEDG+FLDNSSPSPLPAKKLRSDYTVKSHVQLQ SDDPKKPK NVEC
Sbjct: 381 KVQRLIAGSPHLLLEDGVFLDNSSPSPLPAKKLRSDYTVKSHVQLQPSDDPKKPKHNVEC 440

Query: 127 SAENAVGKTSLPPAPINCQPSTNGPYSVNPQPTPVSSDNKLNSWYQTSAHHWLVPVMSPS 186
           SAENAVGKTSLP  PINCQPSTNGPYSVNPQPT VSSDNKL+SWYQTSAHHWLVPVMSPS
Sbjct: 441 SAENAVGKTSLPLEPINCQPSTNGPYSVNPQPTSVSSDNKLSSWYQTSAHHWLVPVMSPS 500

Query: 187 EGLIYKPYPGPGFIYGGCGPYGSMAPMMNPSYGFPASVHQGIGALPSTPMV-GTYFPPYG 246
           EGLIYKPYPGPGFIYGGCGPYG MAPMMNPSYGFPASVHQGIGALP+TPMV G++FPPYG
Sbjct: 501 EGLIYKPYPGPGFIYGGCGPYGPMAPMMNPSYGFPASVHQGIGALPTTPMVGGSFFPPYG 560

Query: 247 MPVMNPGLSGLAVDQVNWYTGDPNQLSGGVAASNMQHQTSYDVSTQRDRDENQTVSQTAK 306
           MPVMNPG+SG AVDQVNWYTGDPNQLSGGVAASN+QHQTSYDVSTQRDRDENQTVS+TAK
Sbjct: 561 MPVMNPGMSGFAVDQVNWYTGDPNQLSGGVAASNIQHQTSYDVSTQRDRDENQTVSRTAK 620

Query: 307 SQAPKRNEVQVSTASSPVTSPASKVQGNKANRTAESHDVLPLFPVALPVVEEGPQPSDSD 366
           SQAPKR+EVQVSTASSPV SP SKVQGNK NRTAESH+VL LFPVA P+VEEGPQPSDSD
Sbjct: 621 SQAPKRSEVQVSTASSPVCSPTSKVQGNKVNRTAESHNVLSLFPVAQPLVEEGPQPSDSD 680

Query: 367 QTKRVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 403
           QT RVIRVVPHNRRSANESAARIFQSIQNERKQYDSI
Sbjct: 681 QT-RVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 716

[Close]

BLAST of Lsi08G015660.1 vs. NCBI nr
Match: gi|659087521|ref|XP_008444497.1| (PREDICTED: protein EARLY FLOWERING 3 [Cucumis melo])

HSP 1 Score: 609.4 bits (1570), Expect = 4.6e-171
Identity = 310/338 (91.72%), Postives = 323/338 (95.56%), Query Frame = 1


Query: 67  QVQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLRSDYTVKSHVQLQLSDDPKKPKDNVEC 126
           +VQRLIAGSPHLLLEDG+FLD+SSPSPLPAKKLRSDYTVKSHVQLQ SDDPKKPK NVEC
Sbjct: 381 KVQRLIAGSPHLLLEDGVFLDSSSPSPLPAKKLRSDYTVKSHVQLQPSDDPKKPKHNVEC 440

Query: 127 SAENAVGKTSLPPAPINCQPSTNGPYSV-NPQPTPVSSDNKLNSWYQTSAHHWLVPVMSP 186
           SAENAVGKTSLP  PINCQPSTNGPYSV NPQPT VSSDNKL+SWYQTSAHHWLVPVMSP
Sbjct: 441 SAENAVGKTSLPLEPINCQPSTNGPYSVQNPQPTSVSSDNKLSSWYQTSAHHWLVPVMSP 500

Query: 187 SEGLIYKPYPGPGFIYGGCGPYGSMAPMMNPSYGFPASVHQGIGALPSTPMVG-TYFPPY 246
           SEGLIYKPYPGPGFIYGGCGPYG M PMMNPSYGFPASVHQGIGALPSTPMVG ++FPPY
Sbjct: 501 SEGLIYKPYPGPGFIYGGCGPYGPMTPMMNPSYGFPASVHQGIGALPSTPMVGGSFFPPY 560

Query: 247 GMPVMNPGLSGLAVDQVNWYTGDPNQLSGGVAASNMQHQTSYDVSTQRDRDENQTVSQTA 306
           GMPVMNPG+SG AVDQVNWY GDPNQLSGGVAASN+QHQTSYDVSTQRDRDENQTVS+TA
Sbjct: 561 GMPVMNPGMSGFAVDQVNWYAGDPNQLSGGVAASNIQHQTSYDVSTQRDRDENQTVSRTA 620

Query: 307 KSQAPKRNEVQVSTASSPVTSPASKVQGNKANRTAESHDVLPLFPVALPVVEEGPQPSDS 366
           KSQAPKR+EVQVSTASSPV SP SKVQGNKANRTAESH+VLPLFP+A P+VEEGPQPSDS
Sbjct: 621 KSQAPKRSEVQVSTASSPVCSPPSKVQGNKANRTAESHNVLPLFPLAPPLVEEGPQPSDS 680

Query: 367 DQTKRVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 403
           DQT RVIRVVPHNRRSANESAARIFQSIQNERKQYDSI
Sbjct: 681 DQT-RVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 717

[Close]

BLAST of Lsi08G015660.1 vs. NCBI nr
Match: gi|590573819|ref|XP_007012227.1| (Hydroxyproline-rich glycoprotein family protein, putative [Theobroma cacao])

HSP 1 Score: 323.6 bits (828), Expect = 5.0e-85
Identity = 191/351 (54.42%), Postives = 226/351 (64.39%), Query Frame = 1


Query: 67  QVQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLRSDYTVKSHVQLQLSDDPKKPKDNVEC 126
           +VQRLIAGSPH+LLED  +L   S    PAKKL  ++ VK     +  DD +KP   +EC
Sbjct: 373 KVQRLIAGSPHILLEDTAYLSKPSFQGSPAKKLPPEFIVKPLPHTKCKDDTEKPSHKMEC 432

Query: 127 SAENAVGKTSLPPAPINCQPSTNGPYSVNPQPTPVSSDNKLNSW--YQTSAHHWLVPVMS 186
           SAENAVG+TSL       QPS  GP+  NP P PV+ DNK+N W  +Q   H WLVPVMS
Sbjct: 433 SAENAVGRTSLSSVKNGSQPSNYGPFLGNPPPAPVNGDNKMNPWCFHQMPGHQWLVPVMS 492

Query: 187 PSEGLIYKPYPGPGF---IYGGCGPYGSMAPM----MNPSYGFPASVHQGIGALPSTPMV 246
           PSEGLIYKPY GPGF   I GGCGP+G   PM    M  +YG  A  HQGIG LP  P V
Sbjct: 493 PSEGLIYKPYTGPGFMGSICGGCGPFG-QTPMTGNFMTSAYGVAAPPHQGIGVLPGAPPV 552

Query: 247 G-TYFPPYGMPVMNPGLSGLAVDQVNWYTGDPN-----QLSGGVAASNMQHQTSYDVSTQ 306
           G +YFPPYGMPVMNP +SG AV+Q+N + G  +     Q SGG A  NMQHQ S ++ ++
Sbjct: 553 GHSYFPPYGMPVMNPAVSGSAVEQMNQFAGPGSYAHNGQFSGGGANFNMQHQNSCNLPSE 612

Query: 307 RDRDENQTVSQTAKSQAPKRNEVQVSTASSPVTSPASKVQGNKANRTAESHDVLPLFPVA 366
           +    N  +S   K QA K  E+Q STAS    SP  +VQ +     AE  + LPLF  A
Sbjct: 613 K----NGAISHVMKFQASKDTELQGSTAS----SPGERVQRDGTRSAAEGKNALPLFRTA 672

Query: 367 LPVVEEGPQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 403
             ++E  PQP DS+QT RVIRVVPHN RSA ESAARIFQSIQ ERKQYDS+
Sbjct: 673 PTILEGAPQPHDSEQTTRVIRVVPHNPRSATESAARIFQSIQEERKQYDSV 714

[Close]

BLAST of Lsi08G015660.1 vs. NCBI nr
Match: gi|1009135658|ref|XP_015885102.1| (PREDICTED: protein EARLY FLOWERING 3 [Ziziphus jujuba])

HSP 1 Score: 293.5 bits (750), Expect = 5.6e-76
Identity = 180/349 (51.58%), Postives = 221/349 (63.32%), Query Frame = 1


Query: 67  QVQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLRSDYTVKSHVQL-QLSDDPKKPKDNVE 126
           +VQ+LIA SPHLLLED  FL  SS +   +KKL S Y VK   Q+    DD +K    +E
Sbjct: 384 KVQQLIAASPHLLLEDSAFLGKSSLTGSLSKKLPSQYVVKPLPQIVNHKDDSEKTSHKME 443

Query: 127 CSAENAVGKTSLPPAPINCQPSTNGPYSVNPQPTPVSSDNKLNSW--YQTSAHHWLVPVM 186
           CSAENAV KTSL    I  QPS  G Y  NPQP PV++DNK+  W  +Q++   WL+PVM
Sbjct: 444 CSAENAVAKTSLSSVKIGSQPSNYGRYFGNPQPAPVATDNKMGPWCFHQSAGQQWLIPVM 503

Query: 187 SPSEGLIYKPYPGPGFIYGGCGPYGSMAPM----MNPSYGFPASVHQGIGALP-STPMVG 246
           SPSEGL+YKPYPGP F+   CGP  +  P+    MN SYG P+S H G+G +P S P+V 
Sbjct: 504 SPSEGLVYKPYPGPAFMGAVCGPPFNSTPVSGNFMNSSYGVPSSHHHGMGIIPGSPPVVH 563

Query: 247 TYFPPYGMPVMNPGLSGLAVDQVNWYTGDPN-----QLSGGVAASNMQHQTSYDVSTQRD 306
            YFPPYGMPV NP + G AV+Q++   G  +     Q+S   A  NMQ Q+S +V TQ++
Sbjct: 564 AYFPPYGMPVGNPVMPGSAVEQMDGCPGPGSHNQHGQVSEAGANFNMQQQSSCNVPTQKN 623

Query: 307 RDENQTVSQTAKSQAPKRNEVQVSTASSPVTSPASKVQGNKANRTAESHDVLPLFPVALP 366
                 V Q+ +S A K +E+Q STASSP      +VQG K +  AE  D L LFP A  
Sbjct: 624 ------VPQSVRSLASKGSELQGSTASSP----GERVQGVKVHSNAEGRDALQLFPTAPA 683

Query: 367 VVEEGPQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 403
             E  PQP  +D   RVIRVVPHN RSA ESAARIFQSIQ ERKQ+DS+
Sbjct: 684 APEGAPQPHGTDLPTRVIRVVPHNPRSATESAARIFQSIQEERKQFDSV 722

[Close]

BLAST of Lsi08G015660.1 vs. NCBI nr
Match: gi|296081604|emb|CBI20609.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 292.4 bits (747), Expect = 1.2e-75
Identity = 185/354 (52.26%), Postives = 223/354 (62.99%), Query Frame = 1


Query: 67  QVQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLRSDYTVKSHVQLQL-SDDPKKPKDNVE 126
           +VQRLIAGSPHL++++  +L   S    PAKKL  +Y VK    + +  DD ++    +E
Sbjct: 327 KVQRLIAGSPHLMVDESAYLGKPSLKSSPAKKLPLEYVVKPPPNMVMHKDDYERASHQLE 386

Query: 127 CSAENAVGKTSLPPAPINCQPSTNGPYSVNPQPTPVSSDNKLNSWY--QTSAHHWLVPVM 186
           CSAENAVGKT LP       PS  GPY  NP P P  +D+K+  W   Q   H WLVPVM
Sbjct: 387 CSAENAVGKTHLPSVKNGNPPSNYGPYIGNPPPAPAPTDSKMGPWCYPQPPGHQWLVPVM 446

Query: 187 SPSEGLIYKPYPGPGF---IYGGCGPYGSMAPM----MNPSYGFPASVH-QGIGALPSTP 246
           SPSEGL+YKPYPGPGF   + GGCGP GS APM    +NP+YG P+S H QGIG  P TP
Sbjct: 447 SPSEGLVYKPYPGPGFMSTVCGGCGPMGS-APMTGSFINPAYGVPSSHHHQGIGVHPGTP 506

Query: 247 MVGT-YFPPYGMPVMN-PGLSGLAVDQVNWYTG-----DPNQLSGGVAASNMQHQTSYDV 306
            +G  YFPPYGM VMN P +SG AV+Q+N + G        QLSGG A+ NMQHQ S +V
Sbjct: 507 PIGHGYFPPYGMSVMNHPTISGSAVEQMNRFAGHGSLSQSGQLSGGGASFNMQHQNSCNV 566

Query: 307 STQRDRDENQTVSQTAKSQAPKRNEVQVSTASSPVTSPASKVQGNKANRTAESHDVLPLF 366
            T +     + + Q  K    K +E Q STASSP    + + Q      TAE  D LPLF
Sbjct: 567 PTPK-----RAIPQGVKFPMSKDSEFQGSTASSP----SEREQQVGTGDTAEGRDPLPLF 626

Query: 367 PVALPVVEEG-PQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNERKQYDS 402
           P+A   +  G PQP+ +DQ  RVIRVVPHN RSA ESAARIFQSIQ+ERKQ DS
Sbjct: 627 PMAPAAIPAGDPQPNGTDQPTRVIRVVPHNPRSATESAARIFQSIQDERKQLDS 670

The following BLAST results are available for this feature:

BLAST of Lsi08G015660.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ELF3_ARATH	5.1e-29	36.91	Protein EARLY FLOWERING 3 OS=Arabidopsis thaliana GN=ELF3 PE=1 SV=1	[more]

BLAST of Lsi08G015660.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNN2_CUCSA	4.5e-173	92.28	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G352370 PE=4 SV=1	[more]
A0A061GJX7_THECC	3.5e-85	54.42	Hydroxyproline-rich glycoprotein family protein, putative OS=Theobroma cacao GN=...	[more]
M5XAQ9_PRUPE	2.5e-75	51.41	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002858mg PE=4 SV=1	[more]
A0A067KDC6_JATCU	4.0e-73	50.42	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07703 PE=4 SV=1	[more]
A0A088PY80_9ROSI	1.5e-72	49.72	EARLY FLOWERING 3 OS=Dimocarpus longan PE=2 SV=1	[more]

BLAST of Lsi08G015660.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G25930.1	2.9e-30	36.91	hydroxyproline-rich glycoprotein family protein	[more]
AT3G21320.1	3.0e-11	28.36	BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glyc...	[more]

BLAST of Lsi08G015660.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449450572\|ref\|XP_004143036.1\|	6.4e-173	92.28	PREDICTED: protein EARLY FLOWERING 3 [Cucumis sativus]	[more]
gi\|659087521\|ref\|XP_008444497.1\|	4.6e-171	91.72	PREDICTED: protein EARLY FLOWERING 3 [Cucumis melo]	[more]
gi\|590573819\|ref\|XP_007012227.1\|	5.0e-85	54.42	Hydroxyproline-rich glycoprotein family protein, putative [Theobroma cacao]	[more]
gi\|1009135658\|ref\|XP_015885102.1\|	5.6e-76	51.58	PREDICTED: protein EARLY FLOWERING 3 [Ziziphus jujuba]	[more]
gi\|296081604\|emb\|CBI20609.3\|	1.2e-75	52.26	unnamed protein product [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044699	single-organism process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi08G015660	Lsi08G015660	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi08G015660.1.CDS.1	Lsi08G015660.1.CDS.1	CDS
Lsi08G015660.1.CDS.2	Lsi08G015660.1.CDS.2	CDS
Lsi08G015660.1.CDS.3	Lsi08G015660.1.CDS.3	CDS
Lsi08G015660.1.CDS.4	Lsi08G015660.1.CDS.4	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi08G015660.1	Lsi08G015660.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34281	FAMILY NOT NAMED	coord: 67..401 score: 8.7
None	No IPR available	PANTHER	PTHR34281:SF2	SUBFAMILY NOT NAMED	coord: 67..401 score: 8.7