Lsi08G015660 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi08G015660
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	EARLY FLOWERING 3
Location	chr08 : 23716518 .. 23718716 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCGTATGAAGGAGTTCAGGAGCATTCGTTGGAGGATATTTTGACAGTACAGAACTTCTTTAGATTTAGTAGAATCGATTTTATGGATGAAAGTAGTGTTCTTTTTAGATCTTTCCCTTCCACCACTTAAGAAGAGTATATTTGCTAGCTTGTCTTGTTATTACCATGCTTTTCGATCAAGGGGAAAAAAAAAGAAAAAAAAGAAAGAAAGAAAAGGACTCTTGTTTTACCAATGAATGTCACATTTATTCTGTGCATTACGTCTCCTTTTGATTGATTTTACTTGCTGATGGGGTTAATAGATGAAGGCCTAGTTGACTGTTTGAAAACCCTGATTTTTCTGTTCATTGATCATGTGTTGAGATTTTTTGTTGTAATGTATTAGGGCAGTTTGTTTGGAGCATGTCTAGCATTGGAAGAATTAAATTTTTATGCTTATCTGTATTTATTCATATTCACAAGCGTTTCATTCCTTTAAGCATTTCTTATTTGTACTAAACATTAACTAGATCCCTGAAGAAAGTGATTAACTAGATCCCTGAAGAAAGTGATTCGATACTTGCACATTAAAAAGCATTGTATGTGGATGTCATATACTCCAATTAGGTATGGTTACCTTCAATTATAGAGAGCATTATGGCTGTGATGGAAGCAAATTTAATTAGAGAGAGTTTTAAGGTTGTGATGACGTTGAGAGGTTAGTGAATCTTGTGGTTGAATAGGGTACCTAGAATGTTGAAATCAGTGCAGGTCTTATAGATAATAACTGTATGTAGCAAGATTGTTAAACCCTAATAGAAGATTTAAGGTTGTGTCCTGCAATCAGGCTAGTTGAGCTACCTTGCAAATGGTTAGTTCAGTGCTAAGGTTGTGACGGCTTGTTATGCAGGCAACTACTTTAACATGATGTTTATGAGTGCTGATTCTGTTTCAATGCTATGAATGGATTGTTGTTATTAGCTACAAAATGCGTTGCGGTTTGATTTCACTCATGATGTTATGTGATTTATTCTTTGAACTTTTATTACTCTGCAGTCAACAGAGAGTGTTTGAGGTCCAAGTGTTCGAGTTGCATAGACTTATCAAGGTAAACTGATCTAATTTCTTCAATTAGCCGCCTTTGTGCCCTGAAGTTCACATTATTGATTCACCTCTCTCTCTCTCTAACTGATCTATCATGCAAACAGGTCCAACGGTTAATTGCTGGATCACCTCATCTGTTACTTGAAGATGGTATTTTTCTGGATAATTCTTCTCCTAGCCCACTTCCTGCAAAGAAACTTAGGTCAGACTACACTGTCAAATCACATGTGCAACTTCAGCTCAGTGATGACCCTAAGAAGCCAAAAGACAATGTGGAATGTTCAGCAGAAAATGCTGTTGGGAAGACATCTCTACCTCCTGCGCCAATTAATTGCCAGCCTTCAACCAATGGGCCTTACTCAGTAAATCCACAACCAACTCCTGTTTCTTCTGATAATAAATTAAACAGTTGGTACCAGACATCAGCACATCACTGGTTGGTCCCTGTAATGTCTCCTTCTGAAGGACTCATATATAAGCCTTACCCTGGGCCTGGATTTATTTATGGAGGATGTGGACCTTATGGATCAATGGCTCCAATGATGAACCCATCCTATGGATTTCCAGCTTCTGTTCATCAAGGAATTGGAGCTCTTCCTAGCACTCCCATGGTTGGTACTTACTTCCCCCCTTATGGCATGCCAGTCATGAATCCCGGTCTGTCAGGTTTGGCTGTTGATCAGGTTAACTGGTACACAGGAGATCCGAATCAATTATCGGGAGGCGTGGCCGCTTCCAATATGCAGCATCAAACTTCATATGATGTTTCAACACAGAGAGATAGAGATGAAAATCAAACTGTTTCACAAACTGCTAAGTCTCAAGCACCCAAAAGGAATGAGGTACAAGTAAGTACTGCAAGCAGTCCTGTAACTAGTCCTGCTAGCAAAGTGCAAGGAAATAAGGCCAATCGTACTGCAGAAAGCCATGACGTGCTTCCACTTTTCCCTGTAGCTCTGCCAGTTGTAGAGGAAGGTCCTCAACCTTCAGACTCTGACCAAACAAAACGCGTGATTCGAGTTGTGCCACACAATCGAAGATCTGCAAATGAATCAGCTGCACGAATTTTCCAATCTATTCAAAATGAGAGAAAACAGTATGACTCAATTTAG

mRNA sequence

ATGGAGCAGAGCATTATGGCTGTGATGGAAGCAAATTTAATTAGAGAGAGTTTTAAGGTTGTGATGACGTTGAGAGTCAACAGAGAGTGTTTGAGGTCCAAGTGTTCGAGTTGCATAGACTTATCAAGCCGCCTTTGTGCCCTGAAGTTCACATTATTGATTCACCTCTCTCTCTCTCTAACTGATCTATCATGCAAACAGGTCCAACGGTTAATTGCTGGATCACCTCATCTGTTACTTGAAGATGGTATTTTTCTGGATAATTCTTCTCCTAGCCCACTTCCTGCAAAGAAACTTAGGTCAGACTACACTGTCAAATCACATGTGCAACTTCAGCTCAGTGATGACCCTAAGAAGCCAAAAGACAATGTGGAATGTTCAGCAGAAAATGCTGTTGGGAAGACATCTCTACCTCCTGCGCCAATTAATTGCCAGCCTTCAACCAATGGGCCTTACTCAGTAAATCCACAACCAACTCCTGTTTCTTCTGATAATAAATTAAACAGTTGGTACCAGACATCAGCACATCACTGGTTGGTCCCTGTAATGTCTCCTTCTGAAGGACTCATATATAAGCCTTACCCTGGGCCTGGATTTATTTATGGAGGATGTGGACCTTATGGATCAATGGCTCCAATGATGAACCCATCCTATGGATTTCCAGCTTCTGTTCATCAAGGAATTGGAGCTCTTCCTAGCACTCCCATGGTTGGTACTTACTTCCCCCCTTATGGCATGCCAGTCATGAATCCCGGTCTGTCAGGTTTGGCTGTTGATCAGGTTAACTGGTACACAGGAGATCCGAATCAATTATCGGGAGGCGTGGCCGCTTCCAATATGCAGCATCAAACTTCATATGATGTTTCAACACAGAGAGATAGAGATGAAAATCAAACTGTTTCACAAACTGCTAAGTCTCAAGCACCCAAAAGGAATGAGGTACAAGTAAGTACTGCAAGCAGTCCTGTAACTAGTCCTGCTAGCAAAGTGCAAGGAAATAAGGCCAATCGTACTGCAGAAAGCCATGACGTGCTTCCACTTTTCCCTGTAGCTCTGCCAGTTGTAGAGGAAGGTCCTCAACCTTCAGACTCTGACCAAACAAAACGCGTGATTCGAGTTGTGCCACACAATCGAAGATCTGCAAATGAATCAGCTGCACGAATTTTCCAATCTATTCAAAATGAGAGAAAACAGTATGACTCAATTTAG

Coding sequence (CDS)

ATGGAGCAGAGCATTATGGCTGTGATGGAAGCAAATTTAATTAGAGAGAGTTTTAAGGTTGTGATGACGTTGAGAGTCAACAGAGAGTGTTTGAGGTCCAAGTGTTCGAGTTGCATAGACTTATCAAGCCGCCTTTGTGCCCTGAAGTTCACATTATTGATTCACCTCTCTCTCTCTCTAACTGATCTATCATGCAAACAGGTCCAACGGTTAATTGCTGGATCACCTCATCTGTTACTTGAAGATGGTATTTTTCTGGATAATTCTTCTCCTAGCCCACTTCCTGCAAAGAAACTTAGGTCAGACTACACTGTCAAATCACATGTGCAACTTCAGCTCAGTGATGACCCTAAGAAGCCAAAAGACAATGTGGAATGTTCAGCAGAAAATGCTGTTGGGAAGACATCTCTACCTCCTGCGCCAATTAATTGCCAGCCTTCAACCAATGGGCCTTACTCAGTAAATCCACAACCAACTCCTGTTTCTTCTGATAATAAATTAAACAGTTGGTACCAGACATCAGCACATCACTGGTTGGTCCCTGTAATGTCTCCTTCTGAAGGACTCATATATAAGCCTTACCCTGGGCCTGGATTTATTTATGGAGGATGTGGACCTTATGGATCAATGGCTCCAATGATGAACCCATCCTATGGATTTCCAGCTTCTGTTCATCAAGGAATTGGAGCTCTTCCTAGCACTCCCATGGTTGGTACTTACTTCCCCCCTTATGGCATGCCAGTCATGAATCCCGGTCTGTCAGGTTTGGCTGTTGATCAGGTTAACTGGTACACAGGAGATCCGAATCAATTATCGGGAGGCGTGGCCGCTTCCAATATGCAGCATCAAACTTCATATGATGTTTCAACACAGAGAGATAGAGATGAAAATCAAACTGTTTCACAAACTGCTAAGTCTCAAGCACCCAAAAGGAATGAGGTACAAGTAAGTACTGCAAGCAGTCCTGTAACTAGTCCTGCTAGCAAAGTGCAAGGAAATAAGGCCAATCGTACTGCAGAAAGCCATGACGTGCTTCCACTTTTCCCTGTAGCTCTGCCAGTTGTAGAGGAAGGTCCTCAACCTTCAGACTCTGACCAAACAAAACGCGTGATTCGAGTTGTGCCACACAATCGAAGATCTGCAAATGAATCAGCTGCACGAATTTTCCAATCTATTCAAAATGAGAGAAAACAGTATGACTCAATTTAG

Protein sequence

MEQSIMAVMEANLIRESFKVVMTLRVNRECLRSKCSSCIDLSSRLCALKFTLLIHLSLSLTDLSCKQVQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLRSDYTVKSHVQLQLSDDPKKPKDNVECSAENAVGKTSLPPAPINCQPSTNGPYSVNPQPTPVSSDNKLNSWYQTSAHHWLVPVMSPSEGLIYKPYPGPGFIYGGCGPYGSMAPMMNPSYGFPASVHQGIGALPSTPMVGTYFPPYGMPVMNPGLSGLAVDQVNWYTGDPNQLSGGVAASNMQHQTSYDVSTQRDRDENQTVSQTAKSQAPKRNEVQVSTASSPVTSPASKVQGNKANRTAESHDVLPLFPVALPVVEEGPQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNERKQYDSI

Homology

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BLAST of Lsi08G015660 vs. Swiss-Prot
Match: ELF3_ARATH (Protein EARLY FLOWERING 3 OS=Arabidopsis thaliana GN=ELF3 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 5.1e-29
Identity = 134/363 (36.91%), Postives = 173/363 (47.66%), Query Frame = 1


Query: 67  QVQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLR-SDYTVKS---HVQL-QLSDDPKKPK 126
           +VQ+LIA SP LLL++  FL   S    P KKL  S++ VK    HV + Q  D  K  +
Sbjct: 356 KVQKLIAASPDLLLDEISFLGKVSAKSYPVKKLLPSEFLVKPPLPHVVVKQRGDSEKTDQ 415

Query: 127 DNVECSAENAVGKTSLPPAPINCQPSTNGPYSVNPQPTPVSSDNKLNSWYQTSAHH--WL 186
             +E SAEN VG+ S      + Q S   P++ NP  +P  +          S +H  WL
Sbjct: 416 HKMESSAENVVGRLSNQG---HHQQSNYMPFANNPPASPAPNGYCFPPQPPPSGNHQQWL 475

Query: 187 VPVMSPSEGLIYKPYPGPGFI--YGGCGPYGSMAPMMNPSYGFPASVHQGIGALPSTPMV 246
           +PVMSPSEGLIYKP+PG      YGG   +    PM+ P Y      H G+G  P  P  
Sbjct: 476 IPVMSPSEGLIYKPHPGMAHTGHYGGYYGHYMPTPMVMPQY------HPGMGFPP--PGN 535

Query: 247 GTYFPPYGM--PVMNPGLSGLAVDQVNWYTGDPN-QLSGGVAASNMQHQTSYDVSTQRDR 306
           G YFPPYGM   +MNP  S     Q       PN Q++      N+Q+        Q+ R
Sbjct: 536 G-YFPPYGMMPTIMNPYCSSQQQQQQQ-----PNEQMNQFGHPGNLQN-----TQQQQQR 595

Query: 307 DEN----QTVSQTAKSQAPKRNEVQVSTASSPVTSPASKVQGNKANR------------T 366
            +N    Q   Q  KS    R   Q ST SSP  S    + G+K+ R             
Sbjct: 596 SDNEPAPQQQQQPTKSYPRARKSRQGSTGSSP--SGPQGISGSKSFRPFAAVDEDSNINN 655

Query: 367 AESHDVLPLFPVALPVVEEGPQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNERKQ 402
           A    +          V +  +  D     RVI+VVPHN + A+E+AARIFQSIQ ERK+
Sbjct: 656 APEQTMTTTTTTTRTTVTQTTR--DGGGVTRVIKVVPHNAKLASENAARIFQSIQEERKR 692

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BLAST of Lsi08G015660 vs. TrEMBL
Match: A0A0A0LNN2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G352370 PE=4 SV=1)

HSP 1 Score: 615.5 bits (1586), Expect = 4.5e-173
Identity = 311/337 (92.28%), Postives = 323/337 (95.85%), Query Frame = 1


Query: 67  QVQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLRSDYTVKSHVQLQLSDDPKKPKDNVEC 126
           +VQRLIAGSPHLLLEDG+FLDNSSPSPLPAKKLRSDYTVKSHVQLQ SDDPKKPK NVEC
Sbjct: 381 KVQRLIAGSPHLLLEDGVFLDNSSPSPLPAKKLRSDYTVKSHVQLQPSDDPKKPKHNVEC 440

Query: 127 SAENAVGKTSLPPAPINCQPSTNGPYSVNPQPTPVSSDNKLNSWYQTSAHHWLVPVMSPS 186
           SAENAVGKTSLP  PINCQPSTNGPYSVNPQPT VSSDNKL+SWYQTSAHHWLVPVMSPS
Sbjct: 441 SAENAVGKTSLPLEPINCQPSTNGPYSVNPQPTSVSSDNKLSSWYQTSAHHWLVPVMSPS 500

Query: 187 EGLIYKPYPGPGFIYGGCGPYGSMAPMMNPSYGFPASVHQGIGALPSTPMV-GTYFPPYG 246
           EGLIYKPYPGPGFIYGGCGPYG MAPMMNPSYGFPASVHQGIGALP+TPMV G++FPPYG
Sbjct: 501 EGLIYKPYPGPGFIYGGCGPYGPMAPMMNPSYGFPASVHQGIGALPTTPMVGGSFFPPYG 560

Query: 247 MPVMNPGLSGLAVDQVNWYTGDPNQLSGGVAASNMQHQTSYDVSTQRDRDENQTVSQTAK 306
           MPVMNPG+SG AVDQVNWYTGDPNQLSGGVAASN+QHQTSYDVSTQRDRDENQTVS+TAK
Sbjct: 561 MPVMNPGMSGFAVDQVNWYTGDPNQLSGGVAASNIQHQTSYDVSTQRDRDENQTVSRTAK 620

Query: 307 SQAPKRNEVQVSTASSPVTSPASKVQGNKANRTAESHDVLPLFPVALPVVEEGPQPSDSD 366
           SQAPKR+EVQVSTASSPV SP SKVQGNK NRTAESH+VL LFPVA P+VEEGPQPSDSD
Sbjct: 621 SQAPKRSEVQVSTASSPVCSPTSKVQGNKVNRTAESHNVLSLFPVAQPLVEEGPQPSDSD 680

Query: 367 QTKRVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 403
           QT RVIRVVPHNRRSANESAARIFQSIQNERKQYDSI
Sbjct: 681 QT-RVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 716

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BLAST of Lsi08G015660 vs. TrEMBL
Match: A0A061GJX7_THECC (Hydroxyproline-rich glycoprotein family protein, putative OS=Theobroma cacao GN=TCM_037249 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 3.5e-85
Identity = 191/351 (54.42%), Postives = 226/351 (64.39%), Query Frame = 1


Query: 67  QVQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLRSDYTVKSHVQLQLSDDPKKPKDNVEC 126
           +VQRLIAGSPH+LLED  +L   S    PAKKL  ++ VK     +  DD +KP   +EC
Sbjct: 373 KVQRLIAGSPHILLEDTAYLSKPSFQGSPAKKLPPEFIVKPLPHTKCKDDTEKPSHKMEC 432

Query: 127 SAENAVGKTSLPPAPINCQPSTNGPYSVNPQPTPVSSDNKLNSW--YQTSAHHWLVPVMS 186
           SAENAVG+TSL       QPS  GP+  NP P PV+ DNK+N W  +Q   H WLVPVMS
Sbjct: 433 SAENAVGRTSLSSVKNGSQPSNYGPFLGNPPPAPVNGDNKMNPWCFHQMPGHQWLVPVMS 492

Query: 187 PSEGLIYKPYPGPGF---IYGGCGPYGSMAPM----MNPSYGFPASVHQGIGALPSTPMV 246
           PSEGLIYKPY GPGF   I GGCGP+G   PM    M  +YG  A  HQGIG LP  P V
Sbjct: 493 PSEGLIYKPYTGPGFMGSICGGCGPFG-QTPMTGNFMTSAYGVAAPPHQGIGVLPGAPPV 552

Query: 247 G-TYFPPYGMPVMNPGLSGLAVDQVNWYTGDPN-----QLSGGVAASNMQHQTSYDVSTQ 306
           G +YFPPYGMPVMNP +SG AV+Q+N + G  +     Q SGG A  NMQHQ S ++ ++
Sbjct: 553 GHSYFPPYGMPVMNPAVSGSAVEQMNQFAGPGSYAHNGQFSGGGANFNMQHQNSCNLPSE 612

Query: 307 RDRDENQTVSQTAKSQAPKRNEVQVSTASSPVTSPASKVQGNKANRTAESHDVLPLFPVA 366
           +    N  +S   K QA K  E+Q STAS    SP  +VQ +     AE  + LPLF  A
Sbjct: 613 K----NGAISHVMKFQASKDTELQGSTAS----SPGERVQRDGTRSAAEGKNALPLFRTA 672

Query: 367 LPVVEEGPQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 403
             ++E  PQP DS+QT RVIRVVPHN RSA ESAARIFQSIQ ERKQYDS+
Sbjct: 673 PTILEGAPQPHDSEQTTRVIRVVPHNPRSATESAARIFQSIQEERKQYDSV 714

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BLAST of Lsi08G015660 vs. TrEMBL
Match: M5XAQ9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002858mg PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 2.5e-75
Identity = 182/354 (51.41%), Postives = 228/354 (64.41%), Query Frame = 1


Query: 67  QVQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLRSDYTVKSHVQL-QLSDDPKKPKDNVE 126
           +VQRLIAGSP+LLLED  FL  SS    PAKKL S+Y VK  +++ +   +P+KP + +E
Sbjct: 284 KVQRLIAGSPNLLLEDTAFLGTSSLRGSPAKKLSSEYVVKPLLRVVKRKHEPEKPNNKIE 343

Query: 127 CSAENAVGKTSLPPAPINCQPSTNGPYSVNPQPTPVSSDNKLNSW--YQTSAHHWLVPVM 186
           CSAENAVGKTSL       Q S  GPY  NPQPTPV +DNK + W  +Q+  H  L+PVM
Sbjct: 344 CSAENAVGKTSLSSVKNGSQTSNYGPYVGNPQPTPVGTDNKASPWCFHQSPGHQLLIPVM 403

Query: 187 SPSEGLIYKPYPGPGF---IYGGCGPYGSMAPM----MNPSYGFPAS-VHQGIGALPSTP 246
           SPSEGL+YKPY GPGF   + GGCGP+ S  PM    + P+YG PAS  HQG G LP+ P
Sbjct: 404 SPSEGLVYKPYHGPGFMGPVCGGCGPFNS-TPMTGNFVKPNYGVPASHHHQGTGVLPAPP 463

Query: 247 MVG-TYFPPYGMPVMNPGLSGLAVDQVNWYT-----GDPNQLSGGVAASNMQHQTSYDVS 306
            +G TYFPPYGM VMNP +    ++Q++W+      G  +QLSGG   SN+QHQ+S ++ 
Sbjct: 464 PLGHTYFPPYGMSVMNPAMPSSGIEQMHWFAGPGSHGQIDQLSGGGTNSNVQHQSSCNMP 523

Query: 307 TQRDRDENQTVSQTAKSQAPKRNEVQVSTASSPVTSPASKVQGNKANRTAESHDVLPLFP 366
           +Q+    +  +      QA   +E+Q STA+SP  +       N     AE  D L LFP
Sbjct: 524 SQK----SGAIPHAMMFQASNDSELQGSTANSPGDTARLGTDQN-----AEGSDALQLFP 583

Query: 367 VALPVVEEG-PQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 403
           +A PV+ EG  QP DS Q  R IRVVPHN R+A  SAARIFQSIQ ERKQ+DSI
Sbjct: 584 MA-PVIPEGVAQPHDSGQPTRAIRVVPHNPRTATASAARIFQSIQEERKQHDSI 626

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BLAST of Lsi08G015660 vs. TrEMBL
Match: A0A067KDC6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07703 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 4.0e-73
Identity = 178/353 (50.42%), Postives = 223/353 (63.17%), Query Frame = 1


Query: 67  QVQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLRSDYTVKSHVQL-QLSDDPKKPKDNVE 126
           +VQRLIA SP LLLEDG +L        PAKKL  ++ V   V + +  D P+KP   +E
Sbjct: 378 KVQRLIAASPDLLLEDGTYLGTPPTKVSPAKKLPPEFVVSPPVHVAKRKDYPEKPNHKME 437

Query: 127 CSAENAVGKTSLPPAPINCQPSTNGPYSVNPQPTPVSSDNKLNSW-YQTS-AHHWLVPVM 186
           CSAENA+GKTS   A    QPS NG Y  NP P PV +D+K++ W +Q S  H WLVPVM
Sbjct: 438 CSAENAIGKTSFSSAKNGSQPSNNGSYLGNPPPVPVPTDSKMSPWCFQHSLGHQWLVPVM 497

Query: 187 SPSEGLIYKPYPGPGFI---YGGCGPYGSMAPM----MNPSYGFPASV--HQGIGALPST 246
           SPSEGL+YKPY  PGF+    GGCGP+G+ +PM    +NP+YG P S   HQG G +P  
Sbjct: 498 SPSEGLVYKPYNAPGFLGSACGGCGPFGA-SPMVGNFINPTYGIPPSSHHHQGTGFIPG- 557

Query: 247 PMVGTYFPPYGMPVMNPGLSGLAVDQVNWY-----TGDPNQLSGGVAASNMQHQTSYDVS 306
             V  YFPPYGMPVM+P +SG AV+Q+N++     TG   Q+SGG A  N+QHQ+S ++ 
Sbjct: 558 --VHGYFPPYGMPVMHPAMSGSAVEQMNYFAGAGSTGQTGQVSGGGANFNVQHQSSCNLP 617

Query: 307 TQRDRDENQTVSQTAKSQAPKRNEVQVSTASSPVTSPASKVQGNKANRTAESHDVLPLFP 366
            Q+    + +V Q  K +A K  E++ STAS    SP  +VQG      AE  D L LFP
Sbjct: 618 NQK----SGSVPQVPKFRASKDTELRGSTAS----SPGERVQGVGTVEAAEGRDALLLFP 677

Query: 367 VALPVVEEGPQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 403
           VA    E   QP ++D   RVI+VVPHN RSA ESAARIF+SIQ ERK  +SI
Sbjct: 678 VAPATPEGASQPQETDMPTRVIKVVPHNPRSATESAARIFKSIQAERKHKNSI 718

[Close]

BLAST of Lsi08G015660 vs. TrEMBL
Match: A0A088PY80_9ROSI (EARLY FLOWERING 3 OS=Dimocarpus longan PE=2 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.5e-72
Identity = 176/354 (49.72%), Postives = 220/354 (62.15%), Query Frame = 1


Query: 67  QVQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLRSDYTVKS--HVQLQLSDDPKKPKDNV 126
           +VQ+LIAGSP LLLED  +L  +S +  PAKK  S+Y VK   H+ ++  DD +KPK N+
Sbjct: 382 KVQQLIAGSPQLLLEDSAYLGKASLNSSPAKKFPSEYVVKPLPHI-VKRKDDFEKPKHNM 441

Query: 127 ECSAENAVGKTSLPPAPINCQPSTNGPYSVNPQPTPVSSDNKLNSWY--QTSAHHWLVPV 186
           ECSAENAVGK S+       QPS  G Y  NP    V+SD+++  WY  Q+    WL+PV
Sbjct: 442 ECSAENAVGKMSVSSVKNGSQPSNYGSYLANPPAASVASDSRMAPWYFHQSPGQQWLIPV 501

Query: 187 MSPSEGLIYKPYPGPGFIY----GGCGPYGSM---APMMNPSYGFPAS-VHQGIGALPST 246
           MSPSEGLIYKPYPGPGF+     GGCGP+G        M+P+YG PA   HQGIGA+P  
Sbjct: 502 MSPSEGLIYKPYPGPGFMGPVCGGGCGPFGPTPIPGNFMHPAYGVPAPHTHQGIGAMPGA 561

Query: 247 PMVGT-YFPPYGMPVMNPGLSGLAVDQVNWYTGDPNQL-----SGGVAASNMQHQTSYDV 306
             VG  YFPPYGMP+MN  +S  A +Q N   G  + L     SGG A  N+QH++S +V
Sbjct: 562 HPVGHGYFPPYGMPIMNQSVSSSAAEQKNQSAGPGSLLQNGLLSGGGANFNVQHESSCNV 621

Query: 307 STQRDRDENQTVSQTAKSQAPKRNEVQVSTASSPVTSPASKVQGNKANRTAESHDVLPLF 366
            TQ+       + Q  + QA K  +VQ STASS       ++Q ++   TAE  +  P F
Sbjct: 622 PTQK----KGAIPQAMQFQASKDMDVQGSTASST----GERMQHDETGATAEGQEAQPHF 681

Query: 367 PVALPVVEEGPQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 403
            +A    +  PQP D++Q  RVIRVVPHN RSA ES ARIFQSIQ ERKQYDSI
Sbjct: 682 SMASVPPQGAPQPQDTEQPTRVIRVVPHNPRSATESVARIFQSIQEERKQYDSI 726

[Close]

BLAST of Lsi08G015660 vs. TAIR10
Match: AT2G25930.1 (AT2G25930.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 130.2 bits (326), Expect = 2.9e-30
Identity = 134/363 (36.91%), Postives = 173/363 (47.66%), Query Frame = 1


Query: 67  QVQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLR-SDYTVKS---HVQL-QLSDDPKKPK 126
           +VQ+LIA SP LLL++  FL   S    P KKL  S++ VK    HV + Q  D  K  +
Sbjct: 356 KVQKLIAASPDLLLDEISFLGKVSAKSYPVKKLLPSEFLVKPPLPHVVVKQRGDSEKTDQ 415

Query: 127 DNVECSAENAVGKTSLPPAPINCQPSTNGPYSVNPQPTPVSSDNKLNSWYQTSAHH--WL 186
             +E SAEN VG+ S      + Q S   P++ NP  +P  +          S +H  WL
Sbjct: 416 HKMESSAENVVGRLSNQG---HHQQSNYMPFANNPPASPAPNGYCFPPQPPPSGNHQQWL 475

Query: 187 VPVMSPSEGLIYKPYPGPGFI--YGGCGPYGSMAPMMNPSYGFPASVHQGIGALPSTPMV 246
           +PVMSPSEGLIYKP+PG      YGG   +    PM+ P Y      H G+G  P  P  
Sbjct: 476 IPVMSPSEGLIYKPHPGMAHTGHYGGYYGHYMPTPMVMPQY------HPGMGFPP--PGN 535

Query: 247 GTYFPPYGM--PVMNPGLSGLAVDQVNWYTGDPN-QLSGGVAASNMQHQTSYDVSTQRDR 306
           G YFPPYGM   +MNP  S     Q       PN Q++      N+Q+        Q+ R
Sbjct: 536 G-YFPPYGMMPTIMNPYCSSQQQQQQQ-----PNEQMNQFGHPGNLQN-----TQQQQQR 595

Query: 307 DEN----QTVSQTAKSQAPKRNEVQVSTASSPVTSPASKVQGNKANR------------T 366
            +N    Q   Q  KS    R   Q ST SSP  S    + G+K+ R             
Sbjct: 596 SDNEPAPQQQQQPTKSYPRARKSRQGSTGSSP--SGPQGISGSKSFRPFAAVDEDSNINN 655

Query: 367 AESHDVLPLFPVALPVVEEGPQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNERKQ 402
           A    +          V +  +  D     RVI+VVPHN + A+E+AARIFQSIQ ERK+
Sbjct: 656 APEQTMTTTTTTTRTTVTQTTR--DGGGVTRVIKVVPHNAKLASENAARIFQSIQEERKR 692

[Close]

BLAST of Lsi08G015660 vs. TAIR10
Match: AT3G21320.1 (AT3G21320.1 BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT2G25930.1))

HSP 1 Score: 67.0 bits (162), Expect = 3.0e-11
Identity = 95/335 (28.36%), Postives = 133/335 (39.70%), Query Frame = 1


Query: 68  VQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLRSDYTVKSHVQLQLSDDPKKPKDNVECS 127
           VQ+++A SP+L LE       S  + +    +RS     SH     +   +KP      +
Sbjct: 278 VQKMVAKSPNLFLE-------SKLNGVKHGTMRS-----SHQLAMAASKVRKP------N 337

Query: 128 AENAVGKTSLPPAPINCQPSTNGPYSVNPQPTPVSSDNKLNSWYQTSAHHWLVPVMSPSE 187
            EN   K      P + +P    P       TP+     L        + WLVPV++ S+
Sbjct: 338 TENH--KPVPEEYPEHMKPKLPLPSISKELVTPIWPQQLL----PPPGNQWLVPVITDSD 397

Query: 188 GLIYKPYPGPGFIYGGCGPYGSMAPMMNPSYGFPASVHQGIGALPSTPMVGTYFPPYGMP 247
           GL+YKP+PGP      C P  S +  M P YG  +           TP       P+   
Sbjct: 398 GLVYKPFPGP------CPP--SSSAFMVPVYGQDSL---------ETPFRFPVSSPFSHS 457

Query: 248 VMNPGLSGLAVDQVNWYTGDPNQLSGGVAASNMQHQTSYDVSTQRDRDENQTVSQTAKSQ 307
              P  +   VDQ N + G   + S    +S+M     + +                KSQ
Sbjct: 458 YFPPPNARTTVDQTNPF-GQFQRWSN--TSSHMTQAIPFSLK---------------KSQ 517

Query: 308 APKRNEVQVSTASSPVTSPASKVQGNKANRTAESH--DVLPLFPVALPVVEEGPQPSDSD 367
               +++  STASSP                 E H  +VLPLFP   P  +         
Sbjct: 518 ESNDSDIHGSTASSP----------------PEKHKLEVLPLFPTE-PTHQTDEYKQKQQ 536

Query: 368 QTKRVIRVVPHNRRSANESAARIFQSIQNERKQYD 401
              R I+ VPHN  SA+ESAARIF+ IQ ER+  D
Sbjct: 578 PMLRAIKAVPHNSTSASESAARIFRFIQEERRDSD 536

[Close]

BLAST of Lsi08G015660 vs. NCBI nr
Match: gi|449450572|ref|XP_004143036.1| (PREDICTED: protein EARLY FLOWERING 3 [Cucumis sativus])

HSP 1 Score: 615.5 bits (1586), Expect = 6.4e-173
Identity = 311/337 (92.28%), Postives = 323/337 (95.85%), Query Frame = 1


Query: 67  QVQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLRSDYTVKSHVQLQLSDDPKKPKDNVEC 126
           +VQRLIAGSPHLLLEDG+FLDNSSPSPLPAKKLRSDYTVKSHVQLQ SDDPKKPK NVEC
Sbjct: 381 KVQRLIAGSPHLLLEDGVFLDNSSPSPLPAKKLRSDYTVKSHVQLQPSDDPKKPKHNVEC 440

Query: 127 SAENAVGKTSLPPAPINCQPSTNGPYSVNPQPTPVSSDNKLNSWYQTSAHHWLVPVMSPS 186
           SAENAVGKTSLP  PINCQPSTNGPYSVNPQPT VSSDNKL+SWYQTSAHHWLVPVMSPS
Sbjct: 441 SAENAVGKTSLPLEPINCQPSTNGPYSVNPQPTSVSSDNKLSSWYQTSAHHWLVPVMSPS 500

Query: 187 EGLIYKPYPGPGFIYGGCGPYGSMAPMMNPSYGFPASVHQGIGALPSTPMV-GTYFPPYG 246
           EGLIYKPYPGPGFIYGGCGPYG MAPMMNPSYGFPASVHQGIGALP+TPMV G++FPPYG
Sbjct: 501 EGLIYKPYPGPGFIYGGCGPYGPMAPMMNPSYGFPASVHQGIGALPTTPMVGGSFFPPYG 560

Query: 247 MPVMNPGLSGLAVDQVNWYTGDPNQLSGGVAASNMQHQTSYDVSTQRDRDENQTVSQTAK 306
           MPVMNPG+SG AVDQVNWYTGDPNQLSGGVAASN+QHQTSYDVSTQRDRDENQTVS+TAK
Sbjct: 561 MPVMNPGMSGFAVDQVNWYTGDPNQLSGGVAASNIQHQTSYDVSTQRDRDENQTVSRTAK 620

Query: 307 SQAPKRNEVQVSTASSPVTSPASKVQGNKANRTAESHDVLPLFPVALPVVEEGPQPSDSD 366
           SQAPKR+EVQVSTASSPV SP SKVQGNK NRTAESH+VL LFPVA P+VEEGPQPSDSD
Sbjct: 621 SQAPKRSEVQVSTASSPVCSPTSKVQGNKVNRTAESHNVLSLFPVAQPLVEEGPQPSDSD 680

Query: 367 QTKRVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 403
           QT RVIRVVPHNRRSANESAARIFQSIQNERKQYDSI
Sbjct: 681 QT-RVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 716

[Close]

BLAST of Lsi08G015660 vs. NCBI nr
Match: gi|659087521|ref|XP_008444497.1| (PREDICTED: protein EARLY FLOWERING 3 [Cucumis melo])

HSP 1 Score: 609.4 bits (1570), Expect = 4.6e-171
Identity = 310/338 (91.72%), Postives = 323/338 (95.56%), Query Frame = 1


Query: 67  QVQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLRSDYTVKSHVQLQLSDDPKKPKDNVEC 126
           +VQRLIAGSPHLLLEDG+FLD+SSPSPLPAKKLRSDYTVKSHVQLQ SDDPKKPK NVEC
Sbjct: 381 KVQRLIAGSPHLLLEDGVFLDSSSPSPLPAKKLRSDYTVKSHVQLQPSDDPKKPKHNVEC 440

Query: 127 SAENAVGKTSLPPAPINCQPSTNGPYSV-NPQPTPVSSDNKLNSWYQTSAHHWLVPVMSP 186
           SAENAVGKTSLP  PINCQPSTNGPYSV NPQPT VSSDNKL+SWYQTSAHHWLVPVMSP
Sbjct: 441 SAENAVGKTSLPLEPINCQPSTNGPYSVQNPQPTSVSSDNKLSSWYQTSAHHWLVPVMSP 500

Query: 187 SEGLIYKPYPGPGFIYGGCGPYGSMAPMMNPSYGFPASVHQGIGALPSTPMVG-TYFPPY 246
           SEGLIYKPYPGPGFIYGGCGPYG M PMMNPSYGFPASVHQGIGALPSTPMVG ++FPPY
Sbjct: 501 SEGLIYKPYPGPGFIYGGCGPYGPMTPMMNPSYGFPASVHQGIGALPSTPMVGGSFFPPY 560

Query: 247 GMPVMNPGLSGLAVDQVNWYTGDPNQLSGGVAASNMQHQTSYDVSTQRDRDENQTVSQTA 306
           GMPVMNPG+SG AVDQVNWY GDPNQLSGGVAASN+QHQTSYDVSTQRDRDENQTVS+TA
Sbjct: 561 GMPVMNPGMSGFAVDQVNWYAGDPNQLSGGVAASNIQHQTSYDVSTQRDRDENQTVSRTA 620

Query: 307 KSQAPKRNEVQVSTASSPVTSPASKVQGNKANRTAESHDVLPLFPVALPVVEEGPQPSDS 366
           KSQAPKR+EVQVSTASSPV SP SKVQGNKANRTAESH+VLPLFP+A P+VEEGPQPSDS
Sbjct: 621 KSQAPKRSEVQVSTASSPVCSPPSKVQGNKANRTAESHNVLPLFPLAPPLVEEGPQPSDS 680

Query: 367 DQTKRVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 403
           DQT RVIRVVPHNRRSANESAARIFQSIQNERKQYDSI
Sbjct: 681 DQT-RVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 717

[Close]

BLAST of Lsi08G015660 vs. NCBI nr
Match: gi|590573819|ref|XP_007012227.1| (Hydroxyproline-rich glycoprotein family protein, putative [Theobroma cacao])

HSP 1 Score: 323.6 bits (828), Expect = 5.0e-85
Identity = 191/351 (54.42%), Postives = 226/351 (64.39%), Query Frame = 1


Query: 67  QVQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLRSDYTVKSHVQLQLSDDPKKPKDNVEC 126
           +VQRLIAGSPH+LLED  +L   S    PAKKL  ++ VK     +  DD +KP   +EC
Sbjct: 373 KVQRLIAGSPHILLEDTAYLSKPSFQGSPAKKLPPEFIVKPLPHTKCKDDTEKPSHKMEC 432

Query: 127 SAENAVGKTSLPPAPINCQPSTNGPYSVNPQPTPVSSDNKLNSW--YQTSAHHWLVPVMS 186
           SAENAVG+TSL       QPS  GP+  NP P PV+ DNK+N W  +Q   H WLVPVMS
Sbjct: 433 SAENAVGRTSLSSVKNGSQPSNYGPFLGNPPPAPVNGDNKMNPWCFHQMPGHQWLVPVMS 492

Query: 187 PSEGLIYKPYPGPGF---IYGGCGPYGSMAPM----MNPSYGFPASVHQGIGALPSTPMV 246
           PSEGLIYKPY GPGF   I GGCGP+G   PM    M  +YG  A  HQGIG LP  P V
Sbjct: 493 PSEGLIYKPYTGPGFMGSICGGCGPFG-QTPMTGNFMTSAYGVAAPPHQGIGVLPGAPPV 552

Query: 247 G-TYFPPYGMPVMNPGLSGLAVDQVNWYTGDPN-----QLSGGVAASNMQHQTSYDVSTQ 306
           G +YFPPYGMPVMNP +SG AV+Q+N + G  +     Q SGG A  NMQHQ S ++ ++
Sbjct: 553 GHSYFPPYGMPVMNPAVSGSAVEQMNQFAGPGSYAHNGQFSGGGANFNMQHQNSCNLPSE 612

Query: 307 RDRDENQTVSQTAKSQAPKRNEVQVSTASSPVTSPASKVQGNKANRTAESHDVLPLFPVA 366
           +    N  +S   K QA K  E+Q STAS    SP  +VQ +     AE  + LPLF  A
Sbjct: 613 K----NGAISHVMKFQASKDTELQGSTAS----SPGERVQRDGTRSAAEGKNALPLFRTA 672

Query: 367 LPVVEEGPQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 403
             ++E  PQP DS+QT RVIRVVPHN RSA ESAARIFQSIQ ERKQYDS+
Sbjct: 673 PTILEGAPQPHDSEQTTRVIRVVPHNPRSATESAARIFQSIQEERKQYDSV 714

[Close]

BLAST of Lsi08G015660 vs. NCBI nr
Match: gi|1009135658|ref|XP_015885102.1| (PREDICTED: protein EARLY FLOWERING 3 [Ziziphus jujuba])

HSP 1 Score: 293.5 bits (750), Expect = 5.6e-76
Identity = 180/349 (51.58%), Postives = 221/349 (63.32%), Query Frame = 1


Query: 67  QVQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLRSDYTVKSHVQL-QLSDDPKKPKDNVE 126
           +VQ+LIA SPHLLLED  FL  SS +   +KKL S Y VK   Q+    DD +K    +E
Sbjct: 384 KVQQLIAASPHLLLEDSAFLGKSSLTGSLSKKLPSQYVVKPLPQIVNHKDDSEKTSHKME 443

Query: 127 CSAENAVGKTSLPPAPINCQPSTNGPYSVNPQPTPVSSDNKLNSW--YQTSAHHWLVPVM 186
           CSAENAV KTSL    I  QPS  G Y  NPQP PV++DNK+  W  +Q++   WL+PVM
Sbjct: 444 CSAENAVAKTSLSSVKIGSQPSNYGRYFGNPQPAPVATDNKMGPWCFHQSAGQQWLIPVM 503

Query: 187 SPSEGLIYKPYPGPGFIYGGCGPYGSMAPM----MNPSYGFPASVHQGIGALP-STPMVG 246
           SPSEGL+YKPYPGP F+   CGP  +  P+    MN SYG P+S H G+G +P S P+V 
Sbjct: 504 SPSEGLVYKPYPGPAFMGAVCGPPFNSTPVSGNFMNSSYGVPSSHHHGMGIIPGSPPVVH 563

Query: 247 TYFPPYGMPVMNPGLSGLAVDQVNWYTGDPN-----QLSGGVAASNMQHQTSYDVSTQRD 306
            YFPPYGMPV NP + G AV+Q++   G  +     Q+S   A  NMQ Q+S +V TQ++
Sbjct: 564 AYFPPYGMPVGNPVMPGSAVEQMDGCPGPGSHNQHGQVSEAGANFNMQQQSSCNVPTQKN 623

Query: 307 RDENQTVSQTAKSQAPKRNEVQVSTASSPVTSPASKVQGNKANRTAESHDVLPLFPVALP 366
                 V Q+ +S A K +E+Q STASSP      +VQG K +  AE  D L LFP A  
Sbjct: 624 ------VPQSVRSLASKGSELQGSTASSP----GERVQGVKVHSNAEGRDALQLFPTAPA 683

Query: 367 VVEEGPQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 403
             E  PQP  +D   RVIRVVPHN RSA ESAARIFQSIQ ERKQ+DS+
Sbjct: 684 APEGAPQPHGTDLPTRVIRVVPHNPRSATESAARIFQSIQEERKQFDSV 722

[Close]

BLAST of Lsi08G015660 vs. NCBI nr
Match: gi|296081604|emb|CBI20609.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 292.4 bits (747), Expect = 1.2e-75
Identity = 185/354 (52.26%), Postives = 223/354 (62.99%), Query Frame = 1


Query: 67  QVQRLIAGSPHLLLEDGIFLDNSSPSPLPAKKLRSDYTVKSHVQLQL-SDDPKKPKDNVE 126
           +VQRLIAGSPHL++++  +L   S    PAKKL  +Y VK    + +  DD ++    +E
Sbjct: 327 KVQRLIAGSPHLMVDESAYLGKPSLKSSPAKKLPLEYVVKPPPNMVMHKDDYERASHQLE 386

Query: 127 CSAENAVGKTSLPPAPINCQPSTNGPYSVNPQPTPVSSDNKLNSWY--QTSAHHWLVPVM 186
           CSAENAVGKT LP       PS  GPY  NP P P  +D+K+  W   Q   H WLVPVM
Sbjct: 387 CSAENAVGKTHLPSVKNGNPPSNYGPYIGNPPPAPAPTDSKMGPWCYPQPPGHQWLVPVM 446

Query: 187 SPSEGLIYKPYPGPGF---IYGGCGPYGSMAPM----MNPSYGFPASVH-QGIGALPSTP 246
           SPSEGL+YKPYPGPGF   + GGCGP GS APM    +NP+YG P+S H QGIG  P TP
Sbjct: 447 SPSEGLVYKPYPGPGFMSTVCGGCGPMGS-APMTGSFINPAYGVPSSHHHQGIGVHPGTP 506

Query: 247 MVGT-YFPPYGMPVMN-PGLSGLAVDQVNWYTG-----DPNQLSGGVAASNMQHQTSYDV 306
            +G  YFPPYGM VMN P +SG AV+Q+N + G        QLSGG A+ NMQHQ S +V
Sbjct: 507 PIGHGYFPPYGMSVMNHPTISGSAVEQMNRFAGHGSLSQSGQLSGGGASFNMQHQNSCNV 566

Query: 307 STQRDRDENQTVSQTAKSQAPKRNEVQVSTASSPVTSPASKVQGNKANRTAESHDVLPLF 366
            T +     + + Q  K    K +E Q STASSP    + + Q      TAE  D LPLF
Sbjct: 567 PTPK-----RAIPQGVKFPMSKDSEFQGSTASSP----SEREQQVGTGDTAEGRDPLPLF 626

Query: 367 PVALPVVEEG-PQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNERKQYDS 402
           P+A   +  G PQP+ +DQ  RVIRVVPHN RSA ESAARIFQSIQ+ERKQ DS
Sbjct: 627 PMAPAAIPAGDPQPNGTDQPTRVIRVVPHNPRSATESAARIFQSIQDERKQLDS 670

The following BLAST results are available for this feature:

BLAST of Lsi08G015660 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ELF3_ARATH	5.1e-29	36.91	Protein EARLY FLOWERING 3 OS=Arabidopsis thaliana GN=ELF3 PE=1 SV=1	[more]

BLAST of Lsi08G015660 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNN2_CUCSA	4.5e-173	92.28	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G352370 PE=4 SV=1	[more]
A0A061GJX7_THECC	3.5e-85	54.42	Hydroxyproline-rich glycoprotein family protein, putative OS=Theobroma cacao GN=...	[more]
M5XAQ9_PRUPE	2.5e-75	51.41	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002858mg PE=4 SV=1	[more]
A0A067KDC6_JATCU	4.0e-73	50.42	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07703 PE=4 SV=1	[more]
A0A088PY80_9ROSI	1.5e-72	49.72	EARLY FLOWERING 3 OS=Dimocarpus longan PE=2 SV=1	[more]

BLAST of Lsi08G015660 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G25930.1	2.9e-30	36.91	hydroxyproline-rich glycoprotein family protein	[more]
AT3G21320.1	3.0e-11	28.36	BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glyc...	[more]

BLAST of Lsi08G015660 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449450572\|ref\|XP_004143036.1\|	6.4e-173	92.28	PREDICTED: protein EARLY FLOWERING 3 [Cucumis sativus]	[more]
gi\|659087521\|ref\|XP_008444497.1\|	4.6e-171	91.72	PREDICTED: protein EARLY FLOWERING 3 [Cucumis melo]	[more]
gi\|590573819\|ref\|XP_007012227.1\|	5.0e-85	54.42	Hydroxyproline-rich glycoprotein family protein, putative [Theobroma cacao]	[more]
gi\|1009135658\|ref\|XP_015885102.1\|	5.6e-76	51.58	PREDICTED: protein EARLY FLOWERING 3 [Ziziphus jujuba]	[more]
gi\|296081604\|emb\|CBI20609.3\|	1.2e-75	52.26	unnamed protein product [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044699	single-organism process
biological_process	GO:0009987	cellular process
biological_process	GO:0050789	regulation of biological process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G015660.1	Lsi08G015660.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34281	FAMILY NOT NAMED	coord: 67..401 score: 8.7
None	No IPR available	PANTHER	PTHR34281:SF2	SUBFAMILY NOT NAMED	coord: 67..401 score: 8.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi08G015660	CmoCh12G005650	Cucurbita moschata (Rifu)	cmolsiB175

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi08G015660	Silver-seed gourd	carlsiB164
Lsi08G015660	Silver-seed gourd	carlsiB295
Lsi08G015660	Silver-seed gourd	carlsiB637
Lsi08G015660	Silver-seed gourd	carlsiB710
Lsi08G015660	Cucumber (Chinese Long) v3	cuclsiB155
Lsi08G015660	Cucumber (Chinese Long) v3	cuclsiB336
Lsi08G015660	Watermelon (97103) v2	lsiwmbB437
Lsi08G015660	Watermelon (97103) v2	lsiwmbB444
Lsi08G015660	Wax gourd	lsiwgoB591
Lsi08G015660	Wax gourd	lsiwgoB627
Lsi08G015660	Bottle gourd (USVL1VR-Ls)	lsilsiB148
Lsi08G015660	Bottle gourd (USVL1VR-Ls)	lsilsiB166
Lsi08G015660	Cucumber (Gy14) v1	cgylsiB571
Lsi08G015660	Cucumber (Gy14) v1	cgylsiB637
Lsi08G015660	Cucurbita maxima (Rimu)	cmalsiB032
Lsi08G015660	Cucurbita maxima (Rimu)	cmalsiB184
Lsi08G015660	Cucurbita maxima (Rimu)	cmalsiB454
Lsi08G015660	Cucurbita maxima (Rimu)	cmalsiB456
Lsi08G015660	Cucurbita maxima (Rimu)	cmalsiB739
Lsi08G015660	Cucurbita moschata (Rifu)	cmolsiB020
Lsi08G015660	Cucurbita moschata (Rifu)	cmolsiB442
Lsi08G015660	Cucurbita moschata (Rifu)	cmolsiB731
Lsi08G015660	Cucurbita pepo (Zucchini)	cpelsiB100
Lsi08G015660	Cucurbita pepo (Zucchini)	cpelsiB477
Lsi08G015660	Cucurbita pepo (Zucchini)	cpelsiB644
Lsi08G015660	Cucurbita pepo (Zucchini)	cpelsiB685
Lsi08G015660	Wild cucumber (PI 183967)	cpilsiB141
Lsi08G015660	Wild cucumber (PI 183967)	cpilsiB316
Lsi08G015660	Cucumber (Chinese Long) v2	culsiB142
Lsi08G015660	Cucumber (Chinese Long) v2	culsiB317
Lsi08G015660	Melon (DHL92) v3.5.1	lsimeB469
Lsi08G015660	Melon (DHL92) v3.5.1	lsimeB488
Lsi08G015660	Watermelon (Charleston Gray)	lsiwcgB432
Lsi08G015660	Watermelon (Charleston Gray)	lsiwcgB438
Lsi08G015660	Watermelon (97103) v1	lsiwmB465
Lsi08G015660	Watermelon (97103) v1	lsiwmB482
Lsi08G015660	Cucumber (Gy14) v2	cgyblsiB129
Lsi08G015660	Cucumber (Gy14) v2	cgyblsiB289
Lsi08G015660	Melon (DHL92) v3.6.1	lsimedB489
Lsi08G015660	Melon (DHL92) v3.6.1	lsimedB507