CmoCh12G005650 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh12G005650
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	EARLY FLOWERING 3
Location	Cmo_Chr12 : 3496839 .. 3498380 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGTTCAGCCGATTGCTAAGCTCTGGGACGCCTCGTAATGTAGGCGACTACTTTACCATGATATATGTCTATGAGCTGATCCTGTTTTCGTGCTATGAATTGATTATTGCTGTTACGTTCAATATGTAGCGATTTGATTTGTTCTTTCAACTTTTGTTACTCTACAGTCAACAAAGAGTATTTGATGTTCAAGTGTTCGAATTGCATAGACTTATCAAGGTAAAGTGATCTAATTTCTTCAAATAGCAGCTTTTGTGATCGAATTGTTCACACTCTCTAAACTTGTCTATGCAAACAGGTCCAACGCTTAATTGCTGGATCACCTCATCTTTTATTTGAAGATGGGATTTTTCTGGACAATTCTCCTCCAAGTCGTCTTCCTACGAAGAAACTTAGCTCAGATTACGCCATCAAATCGCACGTCGAGCTTAAGCACAATGATGACCCGAAGAAGCCAAAACACAATGTGGAATGTTCAGCAGAGAACGCTGTTGGGAAGACTTCTCTTTCTCCTGCACCGGTTGCACCGGTCTGTTGTCAGCCTTCAACGAACGGGCCTTACAAAGTAAATCGACAGCCAACGTCTGTTTCCGCTGATAATAAATTAAGCAGTTGGTACCAGCCATCTGCAGCACATCAGTGGCTGGTCCCGGTATTGTCTCCTTCTGAAGGACTCGTATATAAGCCTTACCCTGCGCCCGGATTCATGTATGGAGGATGTGCACCTTATGGTCCGATGACTCCAATCATGAATCCGTCCTACGGATTTCCAGCTTCTGCTCATCATGGAATTGGGGCGCTTCCTAGTACTCCCATGGTTGGTGGTACTTACTTCCACCCTTATGGCATGCCGGTGATGAATCCTGGTATGTCGGGTTTGCCCCTCGATCAAGTTAACTGGTATACGGGAGATCAGAATCAGTTATCGGGAGGTGTGGCTGCTTACTATATGCAGCATCAAACATCATATGATGTTTCAACACAGAGAGACAGAGATGAAAATCAAGAAACTGTTTCACTAACTGCAAAGTCTCAAGCACCAAAAAGCAATGAGCTACAAGCAAGTACTGCAAGTAGTCCTCCTGGAAAACTGCAAGGAAACGAAGCGAATCGAACCGCTGAAAGCCACGACGTGCTTCCACTTTTCCCTATAGCTCAGCCACTTACAGAGGAAGGCCCTCAACCTTCAGACTCCGACCAAACGAAACGGGTGATTCGAGTCGTGCCACACAATCGGAGATCGGCGAACGAATCAGCTGCTCGTATTTTCCAATCGATTCAAAATGAGAGAAAACAGTATGACTCAATTTAGCCAGTTCTTGTCCCCTCCTTTTTGCTCTCTGTTACCTTAATTTTCTTTGAATTGTCTCACTATGTTGCTTTTTTGGTTCATTTTACAAAACCTCAGCACAGTTTAGTTTATTCATATGTGTATATATATATCTGGAGATTTACATGTCAATGCACTGGGAAACATGAGTGAGGTATCTATGAATGTTGATTTCAAACCCAGTTGTTCATTTCATGTGTGATTATTA

mRNA sequence

ATGTCGGTTCAGCCGATTGCTAAGCTCTGGGACGCCTCTCAACAAAGAGTATTTGATGTTCAAGTGTTCGAATTGCATAGACTTATCAAGGTCCAACGCTTAATTGCTGGATCACCTCATCTTTTATTTGAAGATGGGATTTTTCTGGACAATTCTCCTCCAAGTCGTCTTCCTACGAAGAAACTTAGCTCAGATTACGCCATCAAATCGCACGTCGAGCTTAAGCACAATGATGACCCGAAGAAGCCAAAACACAATGTGGAATGTTCAGCAGAGAACGCTGTTGGGAAGACTTCTCTTTCTCCTGCACCGGTTGCACCGGTCTGTTGTCAGCCTTCAACGAACGGGCCTTACAAAGTAAATCGACAGCCAACGTCTGTTTCCGCTGATAATAAATTAAGCAGTTGGTACCAGCCATCTGCAGCACATCAGTGGCTGGTCCCGGTATTGTCTCCTTCTGAAGGACTCGTATATAAGCCTTACCCTGCGCCCGGATTCATGTATGGAGGATGTGCACCTTATGGTCCGATGACTCCAATCATGAATCCGTCCTACGGATTTCCAGCTTCTGCTCATCATGGAATTGGGGCGCTTCCTAGTACTCCCATGGTTGGTGGTACTTACTTCCACCCTTATGGCATGCCGGTGATGAATCCTGGTATGTCGGGTTTGCCCCTCGATCAAGTTAACTGGTATACGGGAGATCAGAATCAGTTATCGGGAGGTGTGGCTGCTTACTATATGCAGCATCAAACATCATATGATGTTTCAACACAGAGAGACAGAGATGAAAATCAAGAAACTGTTTCACTAACTGCAAAGTCTCAAGCACCAAAAAGCAATGAGCTACAAGCAAGTACTGCAAGTAGTCCTCCTGGAAAACTGCAAGGAAACGAAGCGAATCGAACCGCTGAAAGCCACGACGTGCTTCCACTTTTCCCTATAGCTCAGCCACTTACAGAGGAAGGCCCTCAACCTTCAGACTCCGACCAAACGAAACGGGTGATTCGAGTCGTGCCACACAATCGGAGATCGGCGAACGAATCAGCTGCTCGTATTTTCCAATCGATTCAAAATGAGAGAAAACAGTATGACTCAATTTAGCCAGTTCTTGTCCCCTCCTTTTTGCTCTCTGTTACCTTAATTTTCTTTGAATTGTCTCACTATGTTGCTTTTTTGGTTCATTTTACAAAACCTCAGCACAGTTTAGTTTATTCATATGTGTATATATATATCTGGAGATTTACATGTCAATGCACTGGGAAACATGAGTGAGGTATCTATGAATGTTGATTTCAAACCCAGTTGTTCATTTCATGTGTGATTATTA

Coding sequence (CDS)

ATGTCGGTTCAGCCGATTGCTAAGCTCTGGGACGCCTCTCAACAAAGAGTATTTGATGTTCAAGTGTTCGAATTGCATAGACTTATCAAGGTCCAACGCTTAATTGCTGGATCACCTCATCTTTTATTTGAAGATGGGATTTTTCTGGACAATTCTCCTCCAAGTCGTCTTCCTACGAAGAAACTTAGCTCAGATTACGCCATCAAATCGCACGTCGAGCTTAAGCACAATGATGACCCGAAGAAGCCAAAACACAATGTGGAATGTTCAGCAGAGAACGCTGTTGGGAAGACTTCTCTTTCTCCTGCACCGGTTGCACCGGTCTGTTGTCAGCCTTCAACGAACGGGCCTTACAAAGTAAATCGACAGCCAACGTCTGTTTCCGCTGATAATAAATTAAGCAGTTGGTACCAGCCATCTGCAGCACATCAGTGGCTGGTCCCGGTATTGTCTCCTTCTGAAGGACTCGTATATAAGCCTTACCCTGCGCCCGGATTCATGTATGGAGGATGTGCACCTTATGGTCCGATGACTCCAATCATGAATCCGTCCTACGGATTTCCAGCTTCTGCTCATCATGGAATTGGGGCGCTTCCTAGTACTCCCATGGTTGGTGGTACTTACTTCCACCCTTATGGCATGCCGGTGATGAATCCTGGTATGTCGGGTTTGCCCCTCGATCAAGTTAACTGGTATACGGGAGATCAGAATCAGTTATCGGGAGGTGTGGCTGCTTACTATATGCAGCATCAAACATCATATGATGTTTCAACACAGAGAGACAGAGATGAAAATCAAGAAACTGTTTCACTAACTGCAAAGTCTCAAGCACCAAAAAGCAATGAGCTACAAGCAAGTACTGCAAGTAGTCCTCCTGGAAAACTGCAAGGAAACGAAGCGAATCGAACCGCTGAAAGCCACGACGTGCTTCCACTTTTCCCTATAGCTCAGCCACTTACAGAGGAAGGCCCTCAACCTTCAGACTCCGACCAAACGAAACGGGTGATTCGAGTCGTGCCACACAATCGGAGATCGGCGAACGAATCAGCTGCTCGTATTTTCCAATCGATTCAAAATGAGAGAAAACAGTATGACTCAATTTAG

Homology

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BLAST of CmoCh12G005650 vs. Swiss-Prot
Match: ELF3_ARATH (Protein EARLY FLOWERING 3 OS=Arabidopsis thaliana GN=ELF3 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.7e-34
Identity = 140/385 (36.36%), Postives = 183/385 (47.53%), Query Frame = 1


Query: 12  ASQQRVFDVQVFELHRLIKVQRLIAGSPHLLFEDGIFLDNSPPSRLPTKK-LSSDYAIK- 71
           A+QQRVF VQ+FELHRLIKVQ+LIA SP LL ++  FL        P KK L S++ +K 
Sbjct: 338 ANQQRVFAVQLFELHRLIKVQKLIAASPDLLLDEISFLGKVSAKSYPVKKLLPSEFLVKP 397

Query: 72  --SHVELKHNDDPKK-PKHNVECSAENAVGKTSLSPAPVAPVCCQPSTNGPYKVNRQPTS 131
              HV +K   D +K  +H +E SAEN VG+ S           Q S   P+  N  P +
Sbjct: 398 PLPHVVVKQRGDSEKTDQHKMESSAENVVGRLSNQGHH------QQSNYMPFANN--PPA 457

Query: 132 VSADNKLSSWYQPSAA---HQWLVPVLSPSEGLVYKPYPAPGFM--YGGCAPYGPMTPIM 191
             A N      QP  +    QWL+PV+SPSEGL+YKP+P       YGG   +   TP++
Sbjct: 458 SPAPNGYCFPPQPPPSGNHQQWLIPVMSPSEGLIYKPHPGMAHTGHYGGYYGHYMPTPMV 517

Query: 192 NPSYGFPASAHHGIGALPSTPMVGGTYFHPYGM--PVMNPGMSG------LPLDQVNWYT 251
            P Y      H G+G     P  G  YF PYGM   +MNP  S        P +Q+N + 
Sbjct: 518 MPQY------HPGMG----FPPPGNGYFPPYGMMPTIMNPYCSSQQQQQQQPNEQMNQF- 577

Query: 252 GDQNQLSGGVAAYYMQHQTSYDVSTQRDRDENQETVSLTAKSQAPKSNELQASTASSPPG 311
           G    L           Q +     + D +   +      KS        Q ST SSP G
Sbjct: 578 GHPGNL-----------QNTQQQQQRSDNEPAPQQQQQPTKSYPRARKSRQGSTGSSPSG 637

Query: 312 K--LQGNEANRTAESHDVLPLFPIAQPLTEEGPQPS----------DSDQTKRVIRVVPH 367
              + G+++ R   + D       A   T      +          D     RVI+VVPH
Sbjct: 638 PQGISGSKSFRPFAAVDEDSNINNAPEQTMTTTTTTTRTTVTQTTRDGGGVTRVIKVVPH 692

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BLAST of CmoCh12G005650 vs. TrEMBL
Match: A0A0A0LNN2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G352370 PE=4 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 2.3e-160
Identity = 292/359 (81.34%), Postives = 317/359 (88.30%), Query Frame = 1


Query: 13  SQQRVFDVQVFELHRLIKVQRLIAGSPHLLFEDGIFLDNSPPSRLPTKKLSSDYAIKSHV 72
           +QQRVF+VQVFELHRLIKVQRLIAGSPHLL EDG+FLDNS PS LP KKL SDY +KSHV
Sbjct: 364 NQQRVFEVQVFELHRLIKVQRLIAGSPHLLLEDGVFLDNSSPSPLPAKKLRSDYTVKSHV 423

Query: 73  ELKHNDDPKKPKHNVECSAENAVGKTSLSPAPVAPVCCQPSTNGPYKVNRQPTSVSADNK 132
           +L+ +DDPKKPKHNVECSAENAVGKTSL   P+ P+ CQPSTNGPY VN QPTSVS+DNK
Sbjct: 424 QLQPSDDPKKPKHNVECSAENAVGKTSL---PLEPINCQPSTNGPYSVNPQPTSVSSDNK 483

Query: 133 LSSWYQPSAAHQWLVPVLSPSEGLVYKPYPAPGFMYGGCAPYGPMTPIMNPSYGFPASAH 192
           LSSWYQ SA H WLVPV+SPSEGL+YKPYP PGF+YGGC PYGPM P+MNPSYGFPAS H
Sbjct: 484 LSSWYQTSA-HHWLVPVMSPSEGLIYKPYPGPGFIYGGCGPYGPMAPMMNPSYGFPASVH 543

Query: 193 HGIGALPSTPMVGGTYFHPYGMPVMNPGMSGLPLDQVNWYTGDQNQLSGGVAAYYMQHQT 252
            GIGALP+TPMVGG++F PYGMPVMNPGMSG  +DQVNWYTGD NQLSGGVAA  +QHQT
Sbjct: 544 QGIGALPTTPMVGGSFFPPYGMPVMNPGMSGFAVDQVNWYTGDPNQLSGGVAASNIQHQT 603

Query: 253 SYDVSTQRDRDENQETVSLTAKSQAPKSNELQASTAS----SPPGKLQGNEANRTAESHD 312
           SYDVSTQRDRDENQ TVS TAKSQAPK +E+Q STAS    SP  K+QGN+ NRTAESH+
Sbjct: 604 SYDVSTQRDRDENQ-TVSRTAKSQAPKRSEVQVSTASSPVCSPTSKVQGNKVNRTAESHN 663

Query: 313 VLPLFPIAQPLTEEGPQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 368
           VL LFP+AQPL EEGPQPSDSDQT RVIRVVPHNRRSANESAARIFQSIQNERKQYDSI
Sbjct: 664 VLSLFPVAQPLVEEGPQPSDSDQT-RVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 716

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BLAST of CmoCh12G005650 vs. TrEMBL
Match: A0A061GJX7_THECC (Hydroxyproline-rich glycoprotein family protein, putative OS=Theobroma cacao GN=TCM_037249 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 8.2e-89
Identity = 193/367 (52.59%), Postives = 233/367 (63.49%), Query Frame = 1


Query: 13  SQQRVFDVQVFELHRLIKVQRLIAGSPHLLFEDGIFLDNSPPSRLPTKKLSSDYAIKSHV 72
           +QQR+F VQVFELHRLIKVQRLIAGSPH+L ED  +L        P KKL  ++ +K   
Sbjct: 356 NQQRIFAVQVFELHRLIKVQRLIAGSPHILLEDTAYLSKPSFQGSPAKKLPPEFIVKPLP 415

Query: 73  ELKHNDDPKKPKHNVECSAENAVGKTSLSPAPVAPVCCQPSTNGPYKVNRQPTSVSADNK 132
             K  DD +KP H +ECSAENAVG+TSLS         QPS  GP+  N  P  V+ DNK
Sbjct: 416 HTKCKDDTEKPSHKMECSAENAVGRTSLSSVKNGS---QPSNYGPFLGNPPPAPVNGDNK 475

Query: 133 LSSW-YQPSAAHQWLVPVLSPSEGLVYKPYPAPGFM---YGGCAPYG--PMTP-IMNPSY 192
           ++ W +     HQWLVPV+SPSEGL+YKPY  PGFM    GGC P+G  PMT   M  +Y
Sbjct: 476 MNPWCFHQMPGHQWLVPVMSPSEGLIYKPYTGPGFMGSICGGCGPFGQTPMTGNFMTSAY 535

Query: 193 GFPASAHHGIGALPSTPMVGGTYFHPYGMPVMNPGMSGLPLDQVNWYTGD-----QNQLS 252
           G  A  H GIG LP  P VG +YF PYGMPVMNP +SG  ++Q+N + G        Q S
Sbjct: 536 GVAAPPHQGIGVLPGAPPVGHSYFPPYGMPVMNPAVSGSAVEQMNQFAGPGSYAHNGQFS 595

Query: 253 GGVAAYYMQHQTSYDVSTQRDRDENQETVSLTAKSQAPKSNELQASTASSPPGKLQGNEA 312
           GG A + MQHQ S ++ ++++       +S   K QA K  ELQ STASSP  ++Q +  
Sbjct: 596 GGGANFNMQHQNSCNLPSEKNG-----AISHVMKFQASKDTELQGSTASSPGERVQRDGT 655

Query: 313 NRTAESHDVLPLFPIAQPLTEEGPQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNE 368
              AE  + LPLF  A  + E  PQP DS+QT RVIRVVPHN RSA ESAARIFQSIQ E
Sbjct: 656 RSAAEGKNALPLFRTAPTILEGAPQPHDSEQTTRVIRVVPHNPRSATESAARIFQSIQEE 714

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BLAST of CmoCh12G005650 vs. TrEMBL
Match: A0A088PY80_9ROSI (EARLY FLOWERING 3 OS=Dimocarpus longan PE=2 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 5.7e-82
Identity = 188/373 (50.40%), Postives = 235/373 (63.00%), Query Frame = 1


Query: 12  ASQQRVFDVQVFELHRLIKVQRLIAGSPHLLFEDGIFLDNSPPSRLPTKKLSSDYAIKS- 71
           A+QQRVF VQVFELHRLIKVQ+LIAGSP LL ED  +L  +  +  P KK  S+Y +K  
Sbjct: 364 ANQQRVFAVQVFELHRLIKVQQLIAGSPQLLLEDSAYLGKASLNSSPAKKFPSEYVVKPL 423

Query: 72  -HVELKHNDDPKKPKHNVECSAENAVGKTSLSPAPVAPVCCQPSTNGPYKVNRQPTSVSA 131
            H+ +K  DD +KPKHN+ECSAENAVGK S+S         QPS  G Y  N    SV++
Sbjct: 424 PHI-VKRKDDFEKPKHNMECSAENAVGKMSVSSVKNGS---QPSNYGSYLANPPAASVAS 483

Query: 132 DNKLSSWY-QPSAAHQWLVPVLSPSEGLVYKPYPAPGFMY----GGCAPYGPMTPI---- 191
           D++++ WY   S   QWL+PV+SPSEGL+YKPYP PGFM     GGC P+GP TPI    
Sbjct: 484 DSRMAPWYFHQSPGQQWLIPVMSPSEGLIYKPYPGPGFMGPVCGGGCGPFGP-TPIPGNF 543

Query: 192 MNPSYGFPAS-AHHGIGALPSTPMVGGTYFHPYGMPVMNPGMSGLPLDQVNWYTG----- 251
           M+P+YG PA   H GIGA+P    VG  YF PYGMP+MN  +S    +Q N   G     
Sbjct: 544 MHPAYGVPAPHTHQGIGAMPGAHPVGHGYFPPYGMPIMNQSVSSSAAEQKNQSAGPGSLL 603

Query: 252 DQNQLSGGVAAYYMQHQTSYDVSTQRDRDENQETVSLTAKSQAPKSNELQASTASSPPGK 311
               LSGG A + +QH++S +V TQ+     +  +    + QA K  ++Q STASS   +
Sbjct: 604 QNGLLSGGGANFNVQHESSCNVPTQK-----KGAIPQAMQFQASKDMDVQGSTASSTGER 663

Query: 312 LQGNEANRTAESHDVLPLFPIAQPLTEEGPQPSDSDQTKRVIRVVPHNRRSANESAARIF 368
           +Q +E   TAE  +  P F +A    +  PQP D++Q  RVIRVVPHN RSA ES ARIF
Sbjct: 664 MQHDETGATAEGQEAQPHFSMASVPPQGAPQPQDTEQPTRVIRVVPHNPRSATESVARIF 723

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BLAST of CmoCh12G005650 vs. TrEMBL
Match: A0A067KDC6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07703 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 2.2e-81
Identity = 190/370 (51.35%), Postives = 234/370 (63.24%), Query Frame = 1


Query: 13  SQQRVFDVQVFELHRLIKVQRLIAGSPHLLFEDGIFLDNSPPSRLPTKKLSSDYAIKSHV 72
           +QQR+F VQVFELHRLIKVQRLIA SP LL EDG +L   P    P KKL  ++ +   V
Sbjct: 361 NQQRLFAVQVFELHRLIKVQRLIAASPDLLLEDGTYLGTPPTKVSPAKKLPPEFVVSPPV 420

Query: 73  EL-KHNDDPKKPKHNVECSAENAVGKTSLSPAPVAPVCCQPSTNGPYKVNRQPTSVSADN 132
            + K  D P+KP H +ECSAENA+GKTS S A       QPS NG Y  N  P  V  D+
Sbjct: 421 HVAKRKDYPEKPNHKMECSAENAIGKTSFSSAKNGS---QPSNNGSYLGNPPPVPVPTDS 480

Query: 133 KLSSW-YQPSAAHQWLVPVLSPSEGLVYKPYPAPGFM---YGGCAPYG--PMTP-IMNPS 192
           K+S W +Q S  HQWLVPV+SPSEGLVYKPY APGF+    GGC P+G  PM    +NP+
Sbjct: 481 KMSPWCFQHSLGHQWLVPVMSPSEGLVYKPYNAPGFLGSACGGCGPFGASPMVGNFINPT 540

Query: 193 YGFPASAHH--GIGALPSTPMVGGTYFHPYGMPVMNPGMSGLPLDQVNWY-----TGDQN 252
           YG P S+HH  G G +P    V G YF PYGMPVM+P MSG  ++Q+N++     TG   
Sbjct: 541 YGIPPSSHHHQGTGFIPG---VHG-YFPPYGMPVMHPAMSGSAVEQMNYFAGAGSTGQTG 600

Query: 253 QLSGGVAAYYMQHQTSYDVSTQRDRDENQETVSLTAKSQAPKSNELQASTASSPPGKLQG 312
           Q+SGG A + +QHQ+S ++  Q+       +V    K +A K  EL+ STASSP  ++QG
Sbjct: 601 QVSGGGANFNVQHQSSCNLPNQKSG-----SVPQVPKFRASKDTELRGSTASSPGERVQG 660

Query: 313 NEANRTAESHDVLPLFPIAQPLTEEGPQPSDSDQTKRVIRVVPHNRRSANESAARIFQSI 368
                 AE  D L LFP+A    E   QP ++D   RVI+VVPHN RSA ESAARIF+SI
Sbjct: 661 VGTVEAAEGRDALLLFPVAPATPEGASQPQETDMPTRVIKVVPHNPRSATESAARIFKSI 718

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BLAST of CmoCh12G005650 vs. TrEMBL
Match: A5BVL6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040198 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 4.8e-81
Identity = 193/370 (52.16%), Postives = 226/370 (61.08%), Query Frame = 1


Query: 13   SQQRVFDVQVFELHRLIKVQRLIAGSPHLLFEDGIFLDNSPPSRLPTKKLSSDYAIKSHV 72
            SQQRVF VQVFELHRLIKVQRLIAGSPHL+ ++  +L        P KKL  +Y +K   
Sbjct: 777  SQQRVFAVQVFELHRLIKVQRLIAGSPHLMVDESAYLGKPSLKSSPAKKLPLEYVVKPPP 836

Query: 73   EL-KHNDDPKKPKHNVECSAENAVGKTSLSPAPVAPVCCQPSTNGPYKVNRQPTSVSADN 132
             +  H DD ++  H +ECSAENAVGKT L   P       PS  GPY  N  P     D+
Sbjct: 837  NMVMHKDDYERASHQLECSAENAVGKTHL---PSVKNGNPPSNYGPYIGNPPPAPAPTDS 896

Query: 133  KLSSW-YQPSAAHQWLVPVLSPSEGLVYKPYPAPGFM---YGGCAPYG--PMT-PIMNPS 192
            K+  W Y     HQWLVPV+SPSEGLVYKPYP PGFM    GGC P G  PMT   +NP+
Sbjct: 897  KMGPWCYPQPPGHQWLVPVMSPSEGLVYKPYPGPGFMSTVCGGCGPMGPAPMTGSFINPA 956

Query: 193  YGFPASAHH-GIGALPSTPMVGGTYFHPYGMPVMN-PGMSGLPLDQVNWYTG-----DQN 252
            YG P+S HH GIG  P TP +G  YF PYGM VMN P +SG  ++Q+N + G        
Sbjct: 957  YGVPSSHHHQGIGVHPGTPPIGHGYFPPYGMSVMNHPTISGSAVEQMNRFAGHGSLSQSG 1016

Query: 253  QLSGGVAAYYMQHQTSYDVSTQRDRDENQETVSLTAKSQAPKSNELQASTASSPPGKLQG 312
            QLSGG A++ MQHQ S +V T +        +    K    K +E Q STASSP  + Q 
Sbjct: 1017 QLSGGGASFNMQHQNSCNVPTPK------RAIPQGVKFPMSKDSEFQGSTASSPSEREQQ 1076

Query: 313  NEANRTAESHDVLPLFPIAQPLTEEG-PQPSDSDQTKRVIRVVPHNRRSANESAARIFQS 367
                 TAE  D LPLFP+A      G PQP+ +DQ  RVIRVVPHN RSA ESAARIFQS
Sbjct: 1077 VGTGDTAEGRDPLPLFPMAPAAIPAGDPQPNGTDQPTRVIRVVPHNPRSATESAARIFQS 1136

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BLAST of CmoCh12G005650 vs. TAIR10
Match: AT2G25930.1 (AT2G25930.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 148.3 bits (373), Expect = 9.4e-36
Identity = 140/385 (36.36%), Postives = 183/385 (47.53%), Query Frame = 1


Query: 12  ASQQRVFDVQVFELHRLIKVQRLIAGSPHLLFEDGIFLDNSPPSRLPTKK-LSSDYAIK- 71
           A+QQRVF VQ+FELHRLIKVQ+LIA SP LL ++  FL        P KK L S++ +K 
Sbjct: 338 ANQQRVFAVQLFELHRLIKVQKLIAASPDLLLDEISFLGKVSAKSYPVKKLLPSEFLVKP 397

Query: 72  --SHVELKHNDDPKK-PKHNVECSAENAVGKTSLSPAPVAPVCCQPSTNGPYKVNRQPTS 131
              HV +K   D +K  +H +E SAEN VG+ S           Q S   P+  N  P +
Sbjct: 398 PLPHVVVKQRGDSEKTDQHKMESSAENVVGRLSNQGHH------QQSNYMPFANN--PPA 457

Query: 132 VSADNKLSSWYQPSAA---HQWLVPVLSPSEGLVYKPYPAPGFM--YGGCAPYGPMTPIM 191
             A N      QP  +    QWL+PV+SPSEGL+YKP+P       YGG   +   TP++
Sbjct: 458 SPAPNGYCFPPQPPPSGNHQQWLIPVMSPSEGLIYKPHPGMAHTGHYGGYYGHYMPTPMV 517

Query: 192 NPSYGFPASAHHGIGALPSTPMVGGTYFHPYGM--PVMNPGMSG------LPLDQVNWYT 251
            P Y      H G+G     P  G  YF PYGM   +MNP  S        P +Q+N + 
Sbjct: 518 MPQY------HPGMG----FPPPGNGYFPPYGMMPTIMNPYCSSQQQQQQQPNEQMNQF- 577

Query: 252 GDQNQLSGGVAAYYMQHQTSYDVSTQRDRDENQETVSLTAKSQAPKSNELQASTASSPPG 311
           G    L           Q +     + D +   +      KS        Q ST SSP G
Sbjct: 578 GHPGNL-----------QNTQQQQQRSDNEPAPQQQQQPTKSYPRARKSRQGSTGSSPSG 637

Query: 312 K--LQGNEANRTAESHDVLPLFPIAQPLTEEGPQPS----------DSDQTKRVIRVVPH 367
              + G+++ R   + D       A   T      +          D     RVI+VVPH
Sbjct: 638 PQGISGSKSFRPFAAVDEDSNINNAPEQTMTTTTTTTRTTVTQTTRDGGGVTRVIKVVPH 692

[Close]

BLAST of CmoCh12G005650 vs. TAIR10
Match: AT3G21320.1 (AT3G21320.1 BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT2G25930.1))

HSP 1 Score: 89.4 bits (220), Expect = 5.2e-18
Identity = 105/357 (29.41%), Postives = 146/357 (40.90%), Query Frame = 1


Query: 13  SQQRVFDVQVFELHRLIKVQRLIAGSPHLLFEDGIFLDNSPPSRLPTKKLSSDYAIKSHV 72
           +QQ++F  QVFELHRLI VQ+++A SP+L  E                KL+         
Sbjct: 260 NQQKIFAGQVFELHRLIMVQKMVAKSPNLFLE---------------SKLNG-------- 319

Query: 73  ELKHNDDPKKPKHNVECSAENAVGKTSLSPAPVAPVCCQPSTNGPYKVNRQP-TSVSADN 132
            +KH     +  H +  +A       + +  PV      P     +   + P  S+S + 
Sbjct: 320 -VKHG--TMRSSHQLAMAASKVRKPNTENHKPV------PEEYPEHMKPKLPLPSISKEL 379

Query: 133 KLSSWYQ---PSAAHQWLVPVLSPSEGLVYKPYPAPGFMYGGCAPYGPMTPIMNPSYGFP 192
               W Q   P   +QWLVPV++ S+GLVYKP+P P      C P    +  M P YG  
Sbjct: 380 VTPIWPQQLLPPPGNQWLVPVITDSDGLVYKPFPGP------CPP--SSSAFMVPVYGQD 439

Query: 193 ASAHHGIGALPSTPMVGGTYFHPYGMPVMNPGMSGLPLDQVNWYTGDQNQLSGGVAAYYM 252
           +         P    V   + H Y      P  +   +DQ N                + 
Sbjct: 440 SL------ETPFRFPVSSPFSHSY----FPPPNARTTVDQTN---------------PFG 499

Query: 253 QHQTSYDVSTQRDRDENQETVSLTAKSQAPKSNELQASTASSPPGKLQGNEANRTAESHD 312
           Q Q   + S+       Q       KSQ    +++  STASSPP K             +
Sbjct: 500 QFQRWSNTSSHM----TQAIPFSLKKSQESNDSDIHGSTASSPPEK----------HKLE 536

Query: 313 VLPLFPIAQPLTEEGPQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNERKQYD 366
           VLPLFP  +P  +            R I+ VPHN  SA+ESAARIF+ IQ ER+  D
Sbjct: 560 VLPLFP-TEPTHQTDEYKQKQQPMLRAIKAVPHNSTSASESAARIFRFIQEERRDSD 536

[Close]

BLAST of CmoCh12G005650 vs. NCBI nr
Match: gi|449450572|ref|XP_004143036.1| (PREDICTED: protein EARLY FLOWERING 3 [Cucumis sativus])

HSP 1 Score: 573.2 bits (1476), Expect = 3.3e-160
Identity = 292/359 (81.34%), Postives = 317/359 (88.30%), Query Frame = 1


Query: 13  SQQRVFDVQVFELHRLIKVQRLIAGSPHLLFEDGIFLDNSPPSRLPTKKLSSDYAIKSHV 72
           +QQRVF+VQVFELHRLIKVQRLIAGSPHLL EDG+FLDNS PS LP KKL SDY +KSHV
Sbjct: 364 NQQRVFEVQVFELHRLIKVQRLIAGSPHLLLEDGVFLDNSSPSPLPAKKLRSDYTVKSHV 423

Query: 73  ELKHNDDPKKPKHNVECSAENAVGKTSLSPAPVAPVCCQPSTNGPYKVNRQPTSVSADNK 132
           +L+ +DDPKKPKHNVECSAENAVGKTSL   P+ P+ CQPSTNGPY VN QPTSVS+DNK
Sbjct: 424 QLQPSDDPKKPKHNVECSAENAVGKTSL---PLEPINCQPSTNGPYSVNPQPTSVSSDNK 483

Query: 133 LSSWYQPSAAHQWLVPVLSPSEGLVYKPYPAPGFMYGGCAPYGPMTPIMNPSYGFPASAH 192
           LSSWYQ SA H WLVPV+SPSEGL+YKPYP PGF+YGGC PYGPM P+MNPSYGFPAS H
Sbjct: 484 LSSWYQTSA-HHWLVPVMSPSEGLIYKPYPGPGFIYGGCGPYGPMAPMMNPSYGFPASVH 543

Query: 193 HGIGALPSTPMVGGTYFHPYGMPVMNPGMSGLPLDQVNWYTGDQNQLSGGVAAYYMQHQT 252
            GIGALP+TPMVGG++F PYGMPVMNPGMSG  +DQVNWYTGD NQLSGGVAA  +QHQT
Sbjct: 544 QGIGALPTTPMVGGSFFPPYGMPVMNPGMSGFAVDQVNWYTGDPNQLSGGVAASNIQHQT 603

Query: 253 SYDVSTQRDRDENQETVSLTAKSQAPKSNELQASTAS----SPPGKLQGNEANRTAESHD 312
           SYDVSTQRDRDENQ TVS TAKSQAPK +E+Q STAS    SP  K+QGN+ NRTAESH+
Sbjct: 604 SYDVSTQRDRDENQ-TVSRTAKSQAPKRSEVQVSTASSPVCSPTSKVQGNKVNRTAESHN 663

Query: 313 VLPLFPIAQPLTEEGPQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 368
           VL LFP+AQPL EEGPQPSDSDQT RVIRVVPHNRRSANESAARIFQSIQNERKQYDSI
Sbjct: 664 VLSLFPVAQPLVEEGPQPSDSDQT-RVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 716

[Close]

BLAST of CmoCh12G005650 vs. NCBI nr
Match: gi|659087521|ref|XP_008444497.1| (PREDICTED: protein EARLY FLOWERING 3 [Cucumis melo])

HSP 1 Score: 572.8 bits (1475), Expect = 4.4e-160
Identity = 294/360 (81.67%), Postives = 319/360 (88.61%), Query Frame = 1


Query: 13  SQQRVFDVQVFELHRLIKVQRLIAGSPHLLFEDGIFLDNSPPSRLPTKKLSSDYAIKSHV 72
           +QQRVF+VQVFELHRLIKVQRLIAGSPHLL EDG+FLD+S PS LP KKL SDY +KSHV
Sbjct: 364 NQQRVFEVQVFELHRLIKVQRLIAGSPHLLLEDGVFLDSSSPSPLPAKKLRSDYTVKSHV 423

Query: 73  ELKHNDDPKKPKHNVECSAENAVGKTSLSPAPVAPVCCQPSTNGPYKV-NRQPTSVSADN 132
           +L+ +DDPKKPKHNVECSAENAVGKTSL   P+ P+ CQPSTNGPY V N QPTSVS+DN
Sbjct: 424 QLQPSDDPKKPKHNVECSAENAVGKTSL---PLEPINCQPSTNGPYSVQNPQPTSVSSDN 483

Query: 133 KLSSWYQPSAAHQWLVPVLSPSEGLVYKPYPAPGFMYGGCAPYGPMTPIMNPSYGFPASA 192
           KLSSWYQ SA H WLVPV+SPSEGL+YKPYP PGF+YGGC PYGPMTP+MNPSYGFPAS 
Sbjct: 484 KLSSWYQTSA-HHWLVPVMSPSEGLIYKPYPGPGFIYGGCGPYGPMTPMMNPSYGFPASV 543

Query: 193 HHGIGALPSTPMVGGTYFHPYGMPVMNPGMSGLPLDQVNWYTGDQNQLSGGVAAYYMQHQ 252
           H GIGALPSTPMVGG++F PYGMPVMNPGMSG  +DQVNWY GD NQLSGGVAA  +QHQ
Sbjct: 544 HQGIGALPSTPMVGGSFFPPYGMPVMNPGMSGFAVDQVNWYAGDPNQLSGGVAASNIQHQ 603

Query: 253 TSYDVSTQRDRDENQETVSLTAKSQAPKSNELQASTAS----SPPGKLQGNEANRTAESH 312
           TSYDVSTQRDRDENQ TVS TAKSQAPK +E+Q STAS    SPP K+QGN+ANRTAESH
Sbjct: 604 TSYDVSTQRDRDENQ-TVSRTAKSQAPKRSEVQVSTASSPVCSPPSKVQGNKANRTAESH 663

Query: 313 DVLPLFPIAQPLTEEGPQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 368
           +VLPLFP+A PL EEGPQPSDSDQT RVIRVVPHNRRSANESAARIFQSIQNERKQYDSI
Sbjct: 664 NVLPLFPLAPPLVEEGPQPSDSDQT-RVIRVVPHNRRSANESAARIFQSIQNERKQYDSI 717

[Close]

BLAST of CmoCh12G005650 vs. NCBI nr
Match: gi|590573819|ref|XP_007012227.1| (Hydroxyproline-rich glycoprotein family protein, putative [Theobroma cacao])

HSP 1 Score: 335.5 bits (859), Expect = 1.2e-88
Identity = 193/367 (52.59%), Postives = 233/367 (63.49%), Query Frame = 1


Query: 13  SQQRVFDVQVFELHRLIKVQRLIAGSPHLLFEDGIFLDNSPPSRLPTKKLSSDYAIKSHV 72
           +QQR+F VQVFELHRLIKVQRLIAGSPH+L ED  +L        P KKL  ++ +K   
Sbjct: 356 NQQRIFAVQVFELHRLIKVQRLIAGSPHILLEDTAYLSKPSFQGSPAKKLPPEFIVKPLP 415

Query: 73  ELKHNDDPKKPKHNVECSAENAVGKTSLSPAPVAPVCCQPSTNGPYKVNRQPTSVSADNK 132
             K  DD +KP H +ECSAENAVG+TSLS         QPS  GP+  N  P  V+ DNK
Sbjct: 416 HTKCKDDTEKPSHKMECSAENAVGRTSLSSVKNGS---QPSNYGPFLGNPPPAPVNGDNK 475

Query: 133 LSSW-YQPSAAHQWLVPVLSPSEGLVYKPYPAPGFM---YGGCAPYG--PMTP-IMNPSY 192
           ++ W +     HQWLVPV+SPSEGL+YKPY  PGFM    GGC P+G  PMT   M  +Y
Sbjct: 476 MNPWCFHQMPGHQWLVPVMSPSEGLIYKPYTGPGFMGSICGGCGPFGQTPMTGNFMTSAY 535

Query: 193 GFPASAHHGIGALPSTPMVGGTYFHPYGMPVMNPGMSGLPLDQVNWYTGD-----QNQLS 252
           G  A  H GIG LP  P VG +YF PYGMPVMNP +SG  ++Q+N + G        Q S
Sbjct: 536 GVAAPPHQGIGVLPGAPPVGHSYFPPYGMPVMNPAVSGSAVEQMNQFAGPGSYAHNGQFS 595

Query: 253 GGVAAYYMQHQTSYDVSTQRDRDENQETVSLTAKSQAPKSNELQASTASSPPGKLQGNEA 312
           GG A + MQHQ S ++ ++++       +S   K QA K  ELQ STASSP  ++Q +  
Sbjct: 596 GGGANFNMQHQNSCNLPSEKNG-----AISHVMKFQASKDTELQGSTASSPGERVQRDGT 655

Query: 313 NRTAESHDVLPLFPIAQPLTEEGPQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNE 368
              AE  + LPLF  A  + E  PQP DS+QT RVIRVVPHN RSA ESAARIFQSIQ E
Sbjct: 656 RSAAEGKNALPLFRTAPTILEGAPQPHDSEQTTRVIRVVPHNPRSATESAARIFQSIQEE 714

[Close]

BLAST of CmoCh12G005650 vs. NCBI nr
Match: gi|1009135658|ref|XP_015885102.1| (PREDICTED: protein EARLY FLOWERING 3 [Ziziphus jujuba])

HSP 1 Score: 318.2 bits (814), Expect = 1.9e-83
Identity = 188/366 (51.37%), Postives = 229/366 (62.57%), Query Frame = 1


Query: 13  SQQRVFDVQVFELHRLIKVQRLIAGSPHLLFEDGIFLDNSPPSRLPTKKLSSDYAIKSHV 72
           +QQRVF +QVFELHRLIKVQ+LIA SPHLL ED  FL  S  +   +KKL S Y +K   
Sbjct: 367 NQQRVFAIQVFELHRLIKVQQLIAASPHLLLEDSAFLGKSSLTGSLSKKLPSQYVVKPLP 426

Query: 73  EL-KHNDDPKKPKHNVECSAENAVGKTSLSPAPVAPVCCQPSTNGPYKVNRQPTSVSADN 132
           ++  H DD +K  H +ECSAENAV KTSLS   +     QPS  G Y  N QP  V+ DN
Sbjct: 427 QIVNHKDDSEKTSHKMECSAENAVAKTSLSSVKIG---SQPSNYGRYFGNPQPAPVATDN 486

Query: 133 KLSSW-YQPSAAHQWLVPVLSPSEGLVYKPYPAPGFMYGGCAPYGPMTPI----MNPSYG 192
           K+  W +  SA  QWL+PV+SPSEGLVYKPYP P FM   C P    TP+    MN SYG
Sbjct: 487 KMGPWCFHQSAGQQWLIPVMSPSEGLVYKPYPGPAFMGAVCGPPFNSTPVSGNFMNSSYG 546

Query: 193 FPASAHHGIGALPSTPMVGGTYFHPYGMPVMNPGMSGLPLDQVNWYTG-----DQNQLSG 252
            P+S HHG+G +P +P V   YF PYGMPV NP M G  ++Q++   G        Q+S 
Sbjct: 547 VPSSHHHGMGIIPGSPPVVHAYFPPYGMPVGNPVMPGSAVEQMDGCPGPGSHNQHGQVSE 606

Query: 253 GVAAYYMQHQTSYDVSTQRDRDENQETVSLTAKSQAPKSNELQASTASSPPGKLQGNEAN 312
             A + MQ Q+S +V TQ++       V  + +S A K +ELQ STASSP  ++QG + +
Sbjct: 607 AGANFNMQQQSSCNVPTQKN-------VPQSVRSLASKGSELQGSTASSPGERVQGVKVH 666

Query: 313 RTAESHDVLPLFPIAQPLTEEGPQPSDSDQTKRVIRVVPHNRRSANESAARIFQSIQNER 368
             AE  D L LFP A    E  PQP  +D   RVIRVVPHN RSA ESAARIFQSIQ ER
Sbjct: 667 SNAEGRDALQLFPTAPAAPEGAPQPHGTDLPTRVIRVVPHNPRSATESAARIFQSIQEER 722

[Close]

BLAST of CmoCh12G005650 vs. NCBI nr
Match: gi|684650698|gb|AIN75607.1| (EARLY FLOWERING 3 [Dimocarpus longan])

HSP 1 Score: 312.8 bits (800), Expect = 8.1e-82
Identity = 188/373 (50.40%), Postives = 235/373 (63.00%), Query Frame = 1


Query: 12  ASQQRVFDVQVFELHRLIKVQRLIAGSPHLLFEDGIFLDNSPPSRLPTKKLSSDYAIKS- 71
           A+QQRVF VQVFELHRLIKVQ+LIAGSP LL ED  +L  +  +  P KK  S+Y +K  
Sbjct: 364 ANQQRVFAVQVFELHRLIKVQQLIAGSPQLLLEDSAYLGKASLNSSPAKKFPSEYVVKPL 423

Query: 72  -HVELKHNDDPKKPKHNVECSAENAVGKTSLSPAPVAPVCCQPSTNGPYKVNRQPTSVSA 131
            H+ +K  DD +KPKHN+ECSAENAVGK S+S         QPS  G Y  N    SV++
Sbjct: 424 PHI-VKRKDDFEKPKHNMECSAENAVGKMSVSSVKNGS---QPSNYGSYLANPPAASVAS 483

Query: 132 DNKLSSWY-QPSAAHQWLVPVLSPSEGLVYKPYPAPGFMY----GGCAPYGPMTPI---- 191
           D++++ WY   S   QWL+PV+SPSEGL+YKPYP PGFM     GGC P+GP TPI    
Sbjct: 484 DSRMAPWYFHQSPGQQWLIPVMSPSEGLIYKPYPGPGFMGPVCGGGCGPFGP-TPIPGNF 543

Query: 192 MNPSYGFPAS-AHHGIGALPSTPMVGGTYFHPYGMPVMNPGMSGLPLDQVNWYTG----- 251
           M+P+YG PA   H GIGA+P    VG  YF PYGMP+MN  +S    +Q N   G     
Sbjct: 544 MHPAYGVPAPHTHQGIGAMPGAHPVGHGYFPPYGMPIMNQSVSSSAAEQKNQSAGPGSLL 603

Query: 252 DQNQLSGGVAAYYMQHQTSYDVSTQRDRDENQETVSLTAKSQAPKSNELQASTASSPPGK 311
               LSGG A + +QH++S +V TQ+     +  +    + QA K  ++Q STASS   +
Sbjct: 604 QNGLLSGGGANFNVQHESSCNVPTQK-----KGAIPQAMQFQASKDMDVQGSTASSTGER 663

Query: 312 LQGNEANRTAESHDVLPLFPIAQPLTEEGPQPSDSDQTKRVIRVVPHNRRSANESAARIF 368
           +Q +E   TAE  +  P F +A    +  PQP D++Q  RVIRVVPHN RSA ES ARIF
Sbjct: 664 MQHDETGATAEGQEAQPHFSMASVPPQGAPQPQDTEQPTRVIRVVPHNPRSATESVARIF 723

The following BLAST results are available for this feature:

BLAST of CmoCh12G005650 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ELF3_ARATH	1.7e-34	36.36	Protein EARLY FLOWERING 3 OS=Arabidopsis thaliana GN=ELF3 PE=1 SV=1	[more]

BLAST of CmoCh12G005650 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNN2_CUCSA	2.3e-160	81.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G352370 PE=4 SV=1	[more]
A0A061GJX7_THECC	8.2e-89	52.59	Hydroxyproline-rich glycoprotein family protein, putative OS=Theobroma cacao GN=...	[more]
A0A088PY80_9ROSI	5.7e-82	50.40	EARLY FLOWERING 3 OS=Dimocarpus longan PE=2 SV=1	[more]
A0A067KDC6_JATCU	2.2e-81	51.35	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07703 PE=4 SV=1	[more]
A5BVL6_VITVI	4.8e-81	52.16	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040198 PE=4 SV=1	[more]

BLAST of CmoCh12G005650 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G25930.1	9.4e-36	36.36	hydroxyproline-rich glycoprotein family protein	[more]
AT3G21320.1	5.2e-18	29.41	BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glyc...	[more]

BLAST of CmoCh12G005650 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449450572\|ref\|XP_004143036.1\|	3.3e-160	81.34	PREDICTED: protein EARLY FLOWERING 3 [Cucumis sativus]	[more]
gi\|659087521\|ref\|XP_008444497.1\|	4.4e-160	81.67	PREDICTED: protein EARLY FLOWERING 3 [Cucumis melo]	[more]
gi\|590573819\|ref\|XP_007012227.1\|	1.2e-88	52.59	Hydroxyproline-rich glycoprotein family protein, putative [Theobroma cacao]	[more]
gi\|1009135658\|ref\|XP_015885102.1\|	1.9e-83	51.37	PREDICTED: protein EARLY FLOWERING 3 [Ziziphus jujuba]	[more]
gi\|684650698\|gb\|AIN75607.1\|	8.1e-82	50.40	EARLY FLOWERING 3 [Dimocarpus longan]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0050789	regulation of biological process
biological_process	GO:0044699	single-organism process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G005650.1	CmoCh12G005650.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34281	FAMILY NOT NAMED	coord: 14..366 score: 3.6E
None	No IPR available	PANTHER	PTHR34281:SF2	SUBFAMILY NOT NAMED	coord: 14..366 score: 3.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh12G005650	Lsi08G015660	Bottle gourd (USVL1VR-Ls)	cmolsiB175

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh12G005650	Watermelon (97103) v1	cmowmB134
CmoCh12G005650	Cucurbita pepo (Zucchini)	cmocpeB154
CmoCh12G005650	Cucurbita pepo (Zucchini)	cmocpeB161
CmoCh12G005650	Cucurbita pepo (Zucchini)	cmocpeB166
CmoCh12G005650	Cucurbita pepo (Zucchini)	cmocpeB171
CmoCh12G005650	Cucurbita pepo (Zucchini)	cmocpeB172
CmoCh12G005650	Cucurbita pepo (Zucchini)	cmocpeB174
CmoCh12G005650	Bottle gourd (USVL1VR-Ls)	cmolsiB166
CmoCh12G005650	Bottle gourd (USVL1VR-Ls)	cmolsiB171
CmoCh12G005650	Cucumber (Gy14) v2	cgybcmoB053
CmoCh12G005650	Cucumber (Gy14) v2	cgybcmoB171
CmoCh12G005650	Cucumber (Gy14) v2	cgybcmoB448
CmoCh12G005650	Melon (DHL92) v3.6.1	cmomedB161
CmoCh12G005650	Melon (DHL92) v3.6.1	cmomedB188
CmoCh12G005650	Silver-seed gourd	carcmoB0257
CmoCh12G005650	Silver-seed gourd	carcmoB0440
CmoCh12G005650	Silver-seed gourd	carcmoB0948
CmoCh12G005650	Silver-seed gourd	carcmoB1042
CmoCh12G005650	Cucumber (Chinese Long) v3	cmocucB0186
CmoCh12G005650	Cucumber (Chinese Long) v3	cmocucB0200
CmoCh12G005650	Watermelon (97103) v2	cmowmbB178
CmoCh12G005650	Wax gourd	cmowgoB0190
CmoCh12G005650	Wax gourd	cmowgoB0222
CmoCh12G005650	Cucurbita moschata (Rifu)	cmocmoB004
CmoCh12G005650	Cucurbita moschata (Rifu)	cmocmoB083
CmoCh12G005650	Cucurbita moschata (Rifu)	cmocmoB156
CmoCh12G005650	Cucumber (Gy14) v1	cgycmoB0963
CmoCh12G005650	Cucumber (Gy14) v1	cgycmoB1086
CmoCh12G005650	Cucurbita maxima (Rimu)	cmacmoB033
CmoCh12G005650	Cucurbita maxima (Rimu)	cmacmoB176
CmoCh12G005650	Cucurbita maxima (Rimu)	cmacmoB454
CmoCh12G005650	Cucurbita maxima (Rimu)	cmacmoB770
CmoCh12G005650	Wild cucumber (PI 183967)	cmocpiB160
CmoCh12G005650	Wild cucumber (PI 183967)	cmocpiB172
CmoCh12G005650	Cucumber (Chinese Long) v2	cmocuB158
CmoCh12G005650	Cucumber (Chinese Long) v2	cmocuB169
CmoCh12G005650	Melon (DHL92) v3.5.1	cmomeB146
CmoCh12G005650	Melon (DHL92) v3.5.1	cmomeB171
CmoCh12G005650	Watermelon (Charleston Gray)	cmowcgB161