BLAST of Lsi07G011020.1 vs. Swiss-Prot
Match:
CSP3_ARATH (Cold shock domain-containing protein 3 OS=Arabidopsis thaliana GN=CSP3 PE=1 SV=1)
HSP 1 Score: 211.8 bits (538), Expect = 9.0e-54
Identity = 158/300 (52.67%), Postives = 183/300 (61.00%), Query Frame = 1
Query: 5 RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKS 64
R G V WF+D KG+GFI PD G +LFVHQSSI SDG+RSL +G+ VE++IA G DGK+
Sbjct: 10 RSIGKVSWFSDGKGYGFITPDDGGEELFVHQSSIVSDGFRSLTLGESVEYEIALGSDGKT 69
Query: 65 KAIEVVALDGSSGNRRDNFGGGGGGRGGRGG----------GGGGGYGFGGWRGGDRRNG 124
KAIEV A G S N+++N G GG G GG GG FGG GG RR+G
Sbjct: 70 KAIEVTAPGGGSLNKKENSSRGSGGNCFNCGEVGHMAKDCDGGSGGKSFGG--GGGRRSG 129
Query: 125 NSGAGGGGCYQCGEQGHLARDCTRAS--NRGGGGGGGGGCFTCGEVGHLARDCPRGNSGG 184
G G CY CG+ GH ARDC ++ N GGGGGGG C++CGEVGHLA+DC RG SGG
Sbjct: 130 ----GEGECYMCGDVGHFARDCRQSGGGNSGGGGGGGRPCYSCGEVGHLAKDC-RGGSGG 189
Query: 185 ---GGGGGAGA----CYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIAR 244
GGGGG G+ CY CGG GH ARDC + G GG GGGG C+ CG GHIA+
Sbjct: 190 NRYGGGGGRGSGGDGCYMCGGVGHFARDCRQNG-----GGNVGGGGSTCYTCGGVGHIAK 249
Query: 245 DCQNESRGSGGGGGR----FGG----------------GGGGGSNTCFNCGKSGHFAREC 266
C ++ GGGGGR GG GGGGGSN CF CGK GHFAREC
Sbjct: 250 VCTSKIPSGGGGGGRACYECGGTGHLARDCDRRGSGSSGGGGGSNKCFICGKEGHFAREC 297
BLAST of Lsi07G011020.1 vs. Swiss-Prot
Match:
CSP1_ARATH (Cold shock protein 1 OS=Arabidopsis thaliana GN=CSP1 PE=1 SV=1)
HSP 1 Score: 190.7 bits (483), Expect = 2.1e-47
Identity = 148/290 (51.03%), Postives = 168/290 (57.93%), Query Frame = 1
Query: 5 RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKS 64
R TG V WFN SKG+GFI PD +LFVHQSSI S+GYRSL VGD VEF I G DGK+
Sbjct: 10 RSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDGKT 69
Query: 65 KAIEVVALDGSSGNRRDNFGGGGGGRGGRGGG----GGGGY-----GFGGWRGGDRRNGN 124
KA+ V A G S + +N G G RGG G G G G+ G GG GG R
Sbjct: 70 KAVNVTAPGGGSLKKENNSRGNGARRGGGGSGCYNCGELGHISKDCGIGGGGGGGERRSR 129
Query: 125 SGAGGGGCYQCGEQGHLARDCTRASN---RGGGGGGGGGCFTCGEVGHLARDCPR----- 184
GG GCY CG+ GH ARDCT A N RG GG GC+TCG+VGH+ARDC +
Sbjct: 130 ---GGEGCYNCGDTGHFARDCTSAGNGDQRGATKGGNDGCYTCGDVGHVARDCTQKSVGN 189
Query: 185 GNSGGGGGGGAGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIARDC 244
G+ G GG CY CG GH ARDC + A G+ GGGG G C++CG GHIARDC
Sbjct: 190 GDQRGAVKGGNDGCYTCGDVGHFARDCTQKVA-AGNVRSGGGGSGTCYSCGGVGHIARDC 249
Query: 245 ---QNESRG--SGGGGGRF-------GGGGGGGSNTCFNCGKSGHFAREC 266
+ SRG GG G G GGGG N C+ CGK GHFAREC
Sbjct: 250 ATKRQPSRGCYQCGGSGHLARDCDQRGSGGGGNDNACYKCGKEGHFAREC 295
BLAST of Lsi07G011020.1 vs. Swiss-Prot
Match:
GRP2_NICSY (Glycine-rich protein 2 OS=Nicotiana sylvestris GN=GRP-2 PE=2 SV=1)
HSP 1 Score: 160.2 bits (404), Expect = 3.1e-38
Identity = 124/242 (51.24%), Postives = 145/242 (59.92%), Query Frame = 1
Query: 1 MAEE---RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIA 60
MAEE R G V+WF+D KGFGFI PD G DLFVHQS I+S+G+RSL G+ VEF++
Sbjct: 1 MAEESGQRAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVE 60
Query: 61 PGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRG-GGGGGGYGFGGWRGGDR--RNG 120
G DG++KA++V DG++ GGGGGGRGG G GGG GGYG GG RGG R G
Sbjct: 61 SGGDGRTKAVDVTGPDGAAVQGGRGGGGGGGGRGGGGYGGGSGGYG-GGGRGGSRGYGGG 120
Query: 121 NSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGG 180
+ G GGGG Y G S GGGGGG GG G GGGG
Sbjct: 121 DGGYGGGGGYGGG------------SRYGGGGGGYGG---------------GGGYGGGG 180
Query: 181 GGGAGACYNCGGFGHLARDCNRGGAGGG----SGGGGGGGGGGCFNCGEYGHIARDCQNE 233
GG C+ CG GH ARDC++ G GGG GGGGGGGGGGC+ CGE GH AR+C +
Sbjct: 181 SGGGSGCFKCGESGHFARDCSQSGGGGGGGRFGGGGGGGGGGGCYKCGEDGHFARECTSG 214
BLAST of Lsi07G011020.1 vs. Swiss-Prot
Match:
CSP2_ARATH (Cold shock protein 2 OS=Arabidopsis thaliana GN=CSP2 PE=1 SV=1)
HSP 1 Score: 141.7 bits (356), Expect = 1.1e-32
Identity = 102/201 (50.75%), Postives = 123/201 (61.19%), Query Frame = 1
Query: 4 ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGK 63
ER G V+WF+ KGFGFI PD G DLFVHQSSI+S+G+RSL + VEF++ ++ +
Sbjct: 9 ERRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLAAEEAVEFEVEIDNNNR 68
Query: 64 SKAIEVVALDGS--SGNRRDNFGGGGGG-RGGRGGGGGGGYGFGGWRGGDRRNGNSGAGG 123
KAI+V DG+ GN GG GG GGRGGG G G G+GG GG G G GG
Sbjct: 69 PKAIDVSGPDGAPVQGNSGGGSSGGRGGFGGGRGGGRGSGGGYGGGGGGYGGRGGGGRGG 128
Query: 124 GGCYQCGEQGHLARDCTRASNRGGGGGGG---GGCFTCGEVGHLARDCPRGNSGGGGGGG 183
CY+CGE GH+ARDC+ GGGGGG GG + G G+ G G GGGGG
Sbjct: 129 SDCYKCGEPGHMARDCSEGGGGYGGGGGGYGGGGGYGGGGGGY-------GGGGRGGGGG 188
Query: 184 AGACYNCGGFGHLARDCNRGG 199
G+CY+CG GH ARDC GG
Sbjct: 189 GGSCYSCGESGHFARDCTSGG 202
BLAST of Lsi07G011020.1 vs. Swiss-Prot
Match:
CSP4_ARATH (Cold shock domain-containing protein 4 OS=Arabidopsis thaliana GN=CSP4 PE=1 SV=1)
HSP 1 Score: 139.0 bits (349), Expect = 7.4e-32
Identity = 105/226 (46.46%), Postives = 122/226 (53.98%), Query Frame = 1
Query: 4 ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGK 63
+R G V+WF+ KGFGFI P G DLFVHQSSI+S+G+RSL + VEF + + G+
Sbjct: 13 DRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGR 72
Query: 64 SKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAGGGGC 123
KAIEV DG+ GG GGRGG GGGGG RGG R G+ G G GG
Sbjct: 73 PKAIEVSGPDGAPVQGNSGGGGSSGGRGGFGGGGG--------RGGGRGGGSYGGGYGG- 132
Query: 124 YQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGAGACYN 183
R S GGGGG CF CGE GH+AR+C +G G GGGG G
Sbjct: 133 --------------RGSGGRGGGGGDNSCFKCGEPGHMARECSQGGGGYSGGGGGGRY-- 192
Query: 184 CGGFGHLARDCNRGGAGGGSGGGGGGGGGG--CFNCGEYGHIARDC 228
GSGGGGGGGGGG C++CGE GH ARDC
Sbjct: 193 ------------------GSGGGGGGGGGGLSCYSCGESGHFARDC 195
BLAST of Lsi07G011020.1 vs. TrEMBL
Match:
A0A0A0L4X7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002765 PE=4 SV=1)
HSP 1 Score: 487.3 bits (1253), Expect = 1.2e-134
Identity = 264/274 (96.35%), Postives = 264/274 (96.35%), Query Frame = 1
Query: 1 MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD
Sbjct: 1 MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
Query: 61 DGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAGG 120
DGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAGG
Sbjct: 61 DGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAGG 120
Query: 121 GGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNS---GGGGGGG 180
GGCYQCGEQGHLARDCTR SNRGGGGGGGGGCFTCGEVGHLARDCPRGNS GGGGGGG
Sbjct: 121 GGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGG 180
Query: 181 AGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIARDCQNESRGS-GG 240
GACYNCGGFGHLARDCNRGGAGGGS GGGGGGGGCFNCGEYGHIARDCQNESRGS GG
Sbjct: 181 GGACYNCGGFGHLARDCNRGGAGGGS--GGGGGGGGCFNCGEYGHIARDCQNESRGSGGG 240
Query: 241 GGGRF--GGGGGGGSNTCFNCGKSGHFARECPDA 269
GGGRF GGGGGGGSNTCFNCGKSGHFARECPDA
Sbjct: 241 GGGRFGGGGGGGGGSNTCFNCGKSGHFARECPDA 272
BLAST of Lsi07G011020.1 vs. TrEMBL
Match:
E5RDD6_CUCME (Cold-shock DNA-binding family protein OS=Cucumis melo subsp. melo PE=4 SV=1)
HSP 1 Score: 485.0 bits (1247), Expect = 6.1e-134
Identity = 262/274 (95.62%), Postives = 263/274 (95.99%), Query Frame = 1
Query: 1 MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD
Sbjct: 1 MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
Query: 61 DGKSKAIEVVALDGSSGNRRDNF---GGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG 120
DGKSKAIEVVALDGSSGNRRDNF GGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG
Sbjct: 61 DGKSKAIEVVALDGSSGNRRDNFGGGGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG 120
Query: 121 AGGGGCYQCGEQGHLARDCTRASNR-GGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG 180
GGGGCYQCGEQGHLARDCTR SNR GGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG
Sbjct: 121 GGGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG 180
Query: 181 GA--GACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIARDCQNESRGS 240
G+ GACYNCGGFGHLARDCNRGGAGGGS GGGGGGGCFNCGEYGHIARDCQNESRGS
Sbjct: 181 GSGGGACYNCGGFGHLARDCNRGGAGGGS---GGGGGGGCFNCGEYGHIARDCQNESRGS 240
Query: 241 GGGGGRFGGGGGGGSNTCFNCGKSGHFARECPDA 269
GGGGGRFGGGGGGGSNTCFNCGKSGHFARECPDA
Sbjct: 241 GGGGGRFGGGGGGGSNTCFNCGKSGHFARECPDA 271
BLAST of Lsi07G011020.1 vs. TrEMBL
Match:
W9SMZ6_9ROSA (Glycine-rich protein 2 OS=Morus notabilis GN=L484_026671 PE=4 SV=1)
HSP 1 Score: 296.2 bits (757), Expect = 4.0e-77
Identity = 178/280 (63.57%), Postives = 195/280 (69.64%), Query Frame = 1
Query: 1 MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
MAEER TG V+WFNDSKGFGFI PD G DLFVHQSSIKSDG+RSL GD VEFQIA D
Sbjct: 1 MAEERSTGKVRWFNDSKGFGFITPDDGGEDLFVHQSSIKSDGFRSLAEGDTVEFQIAIAD 60
Query: 61 DGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAGG 120
DGK+KA++V GSS GGG GG G GG GGGG+G GGWRGGDRRNG GG
Sbjct: 61 DGKTKAVDVTGPGGSSLQGTKKGGGGRGGGFGGGGFGGGGFG-GGWRGGDRRNGG---GG 120
Query: 121 GGCYQCGEQGHLARDCTRASNR------GGGGGGGGGCFTCGEVGHLARDCPR------G 180
GC+ CG+ GHLARDC R GGGGGGGGGCF+CGE GH+AR+CPR G
Sbjct: 121 SGCFNCGDPGHLARDCDRDRGNNGNFGGGGGGGGGGGCFSCGEFGHMARNCPRASGGAGG 180
Query: 181 NSGGGGGGGAGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIARDCQ 240
GGGGGGG G CY CG FGHLARDCNR GGGGGG GGC+NCGE+GH+AR+C
Sbjct: 181 GVGGGGGGGGGGCYKCGEFGHLARDCNR--------GGGGGGSGGCYNCGEFGHMARECS 240
Query: 241 NESRGSGGGGGRFGGGGGGGSNTCFNCGKSGHFARECPDA 269
S GSGGGG N+C+NCG GHFARECPDA
Sbjct: 241 KASGGSGGGG-----------NSCYNCGNPGHFARECPDA 257
BLAST of Lsi07G011020.1 vs. TrEMBL
Match:
V7CFP6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G263300g PE=4 SV=1)
HSP 1 Score: 273.9 bits (699), Expect = 2.1e-70
Identity = 167/268 (62.31%), Postives = 188/268 (70.15%), Query Frame = 1
Query: 1 MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
MAEER TGVVQWFN+ KGFGFIKPD G DLFVHQSSI+SDGYR+L+ GD VEF IA GD
Sbjct: 1 MAEERFTGVVQWFNNGKGFGFIKPDDGGEDLFVHQSSIRSDGYRTLLEGDRVEFAIATGD 60
Query: 61 DGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAGG 120
+ K+KAI+V +DG+ R G G GYGF G RRNG +GAGG
Sbjct: 61 NDKTKAIDVTGIDGAPLQPR-----------AAAGNRGSGYGF-----GPRRNG-AGAGG 120
Query: 121 GGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGAGA 180
CYQCG+ GHLARDC R++N GGGGGGGCF CG GHLARDC RG + GGGGGG+G+
Sbjct: 121 AACYQCGDFGHLARDCNRSTN--SGGGGGGGCFVCGGFGHLARDCARGGNIGGGGGGSGS 180
Query: 181 CYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGR 240
C+ CGGFGH+ARDC G GGGG GGGCF CGE GH+ARDC E G GGG
Sbjct: 181 CFRCGGFGHMARDC---ATAKSVGVGGGGSGGGCFRCGEVGHLARDCGIEG-GRFGGGNS 240
Query: 241 FGGGGGGGSNTCFNCGKSGHFARECPDA 269
GGGGG G +TCFNCGK GHFAREC +A
Sbjct: 241 GGGGGGAGKSTCFNCGKPGHFARECVEA 245
BLAST of Lsi07G011020.1 vs. TrEMBL
Match:
A0A0S3R460_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G322400 PE=4 SV=1)
HSP 1 Score: 268.9 bits (686), Expect = 6.9e-69
Identity = 166/273 (60.81%), Postives = 186/273 (68.13%), Query Frame = 1
Query: 1 MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
MAEER TGVVQWFN+ KGFGFIKPD G DLFVHQSSI+SDGYR+L+ GD VEF IA GD
Sbjct: 1 MAEERFTGVVQWFNNGKGFGFIKPDDGGEDLFVHQSSIRSDGYRTLLEGDRVEFAIATGD 60
Query: 61 DGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAGG 120
+ K+KA++V +DG+ R G G GYGFG RRNG +GAGG
Sbjct: 61 NDKTKAVDVTGIDGAPLQPR-----------AASGNRGSGYGFGS-----RRNG-AGAGG 120
Query: 121 GGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGAG- 180
CYQCG+ GHLARDC R+SN GGGGGCF CG GHLARDC RG +GGGGGGG G
Sbjct: 121 AACYQCGDFGHLARDCNRSSN----SGGGGGCFVCGGFGHLARDCVRGGNGGGGGGGGGG 180
Query: 181 ----ACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIARDCQNESRGSG 240
+C+ CGGFGH+ARDC A S GGGGG GGGCF CGE GH+ARDC E G
Sbjct: 181 GGGGSCFRCGGFGHMARDC----ATAKSVGGGGGSGGGCFRCGEVGHLARDCGIEGGRYG 240
Query: 241 GGGGRFGGGGGGGSNTCFNCGKSGHFARECPDA 269
GG GG GG G +TCFNCGK GHFAREC +A
Sbjct: 241 GGNSGGGGAGGAGKSTCFNCGKPGHFARECVEA 248
BLAST of Lsi07G011020.1 vs. TAIR10
Match:
AT2G17870.1 (AT2G17870.1 cold shock domain protein 3)
HSP 1 Score: 211.8 bits (538), Expect = 5.1e-55
Identity = 158/300 (52.67%), Postives = 183/300 (61.00%), Query Frame = 1
Query: 5 RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKS 64
R G V WF+D KG+GFI PD G +LFVHQSSI SDG+RSL +G+ VE++IA G DGK+
Sbjct: 10 RSIGKVSWFSDGKGYGFITPDDGGEELFVHQSSIVSDGFRSLTLGESVEYEIALGSDGKT 69
Query: 65 KAIEVVALDGSSGNRRDNFGGGGGGRGGRGG----------GGGGGYGFGGWRGGDRRNG 124
KAIEV A G S N+++N G GG G GG GG FGG GG RR+G
Sbjct: 70 KAIEVTAPGGGSLNKKENSSRGSGGNCFNCGEVGHMAKDCDGGSGGKSFGG--GGGRRSG 129
Query: 125 NSGAGGGGCYQCGEQGHLARDCTRAS--NRGGGGGGGGGCFTCGEVGHLARDCPRGNSGG 184
G G CY CG+ GH ARDC ++ N GGGGGGG C++CGEVGHLA+DC RG SGG
Sbjct: 130 ----GEGECYMCGDVGHFARDCRQSGGGNSGGGGGGGRPCYSCGEVGHLAKDC-RGGSGG 189
Query: 185 ---GGGGGAGA----CYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIAR 244
GGGGG G+ CY CGG GH ARDC + G GG GGGG C+ CG GHIA+
Sbjct: 190 NRYGGGGGRGSGGDGCYMCGGVGHFARDCRQNG-----GGNVGGGGSTCYTCGGVGHIAK 249
Query: 245 DCQNESRGSGGGGGR----FGG----------------GGGGGSNTCFNCGKSGHFAREC 266
C ++ GGGGGR GG GGGGGSN CF CGK GHFAREC
Sbjct: 250 VCTSKIPSGGGGGGRACYECGGTGHLARDCDRRGSGSSGGGGGSNKCFICGKEGHFAREC 297
BLAST of Lsi07G011020.1 vs. TAIR10
Match:
AT4G36020.1 (AT4G36020.1 cold shock domain protein 1)
HSP 1 Score: 190.7 bits (483), Expect = 1.2e-48
Identity = 148/290 (51.03%), Postives = 168/290 (57.93%), Query Frame = 1
Query: 5 RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKS 64
R TG V WFN SKG+GFI PD +LFVHQSSI S+GYRSL VGD VEF I G DGK+
Sbjct: 10 RSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDGKT 69
Query: 65 KAIEVVALDGSSGNRRDNFGGGGGGRGGRGGG----GGGGY-----GFGGWRGGDRRNGN 124
KA+ V A G S + +N G G RGG G G G G+ G GG GG R
Sbjct: 70 KAVNVTAPGGGSLKKENNSRGNGARRGGGGSGCYNCGELGHISKDCGIGGGGGGGERRSR 129
Query: 125 SGAGGGGCYQCGEQGHLARDCTRASN---RGGGGGGGGGCFTCGEVGHLARDCPR----- 184
GG GCY CG+ GH ARDCT A N RG GG GC+TCG+VGH+ARDC +
Sbjct: 130 ---GGEGCYNCGDTGHFARDCTSAGNGDQRGATKGGNDGCYTCGDVGHVARDCTQKSVGN 189
Query: 185 GNSGGGGGGGAGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIARDC 244
G+ G GG CY CG GH ARDC + A G+ GGGG G C++CG GHIARDC
Sbjct: 190 GDQRGAVKGGNDGCYTCGDVGHFARDCTQKVA-AGNVRSGGGGSGTCYSCGGVGHIARDC 249
Query: 245 ---QNESRG--SGGGGGRF-------GGGGGGGSNTCFNCGKSGHFAREC 266
+ SRG GG G G GGGG N C+ CGK GHFAREC
Sbjct: 250 ATKRQPSRGCYQCGGSGHLARDCDQRGSGGGGNDNACYKCGKEGHFAREC 295
BLAST of Lsi07G011020.1 vs. TAIR10
Match:
AT4G38680.1 (AT4G38680.1 glycine rich protein 2)
HSP 1 Score: 141.7 bits (356), Expect = 6.4e-34
Identity = 102/201 (50.75%), Postives = 123/201 (61.19%), Query Frame = 1
Query: 4 ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGK 63
ER G V+WF+ KGFGFI PD G DLFVHQSSI+S+G+RSL + VEF++ ++ +
Sbjct: 9 ERRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLAAEEAVEFEVEIDNNNR 68
Query: 64 SKAIEVVALDGS--SGNRRDNFGGGGGG-RGGRGGGGGGGYGFGGWRGGDRRNGNSGAGG 123
KAI+V DG+ GN GG GG GGRGGG G G G+GG GG G G GG
Sbjct: 69 PKAIDVSGPDGAPVQGNSGGGSSGGRGGFGGGRGGGRGSGGGYGGGGGGYGGRGGGGRGG 128
Query: 124 GGCYQCGEQGHLARDCTRASNRGGGGGGG---GGCFTCGEVGHLARDCPRGNSGGGGGGG 183
CY+CGE GH+ARDC+ GGGGGG GG + G G+ G G GGGGG
Sbjct: 129 SDCYKCGEPGHMARDCSEGGGGYGGGGGGYGGGGGYGGGGGGY-------GGGGRGGGGG 188
Query: 184 AGACYNCGGFGHLARDCNRGG 199
G+CY+CG GH ARDC GG
Sbjct: 189 GGSCYSCGESGHFARDCTSGG 202
BLAST of Lsi07G011020.1 vs. TAIR10
Match:
AT2G21060.1 (AT2G21060.1 glycine-rich protein 2B)
HSP 1 Score: 139.0 bits (349), Expect = 4.2e-33
Identity = 105/226 (46.46%), Postives = 122/226 (53.98%), Query Frame = 1
Query: 4 ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGK 63
+R G V+WF+ KGFGFI P G DLFVHQSSI+S+G+RSL + VEF + + G+
Sbjct: 13 DRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGR 72
Query: 64 SKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAGGGGC 123
KAIEV DG+ GG GGRGG GGGGG RGG R G+ G G GG
Sbjct: 73 PKAIEVSGPDGAPVQGNSGGGGSSGGRGGFGGGGG--------RGGGRGGGSYGGGYGG- 132
Query: 124 YQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGAGACYN 183
R S GGGGG CF CGE GH+AR+C +G G GGGG G
Sbjct: 133 --------------RGSGGRGGGGGDNSCFKCGEPGHMARECSQGGGGYSGGGGGGRY-- 192
Query: 184 CGGFGHLARDCNRGGAGGGSGGGGGGGGGG--CFNCGEYGHIARDC 228
GSGGGGGGGGGG C++CGE GH ARDC
Sbjct: 193 ------------------GSGGGGGGGGGGLSCYSCGESGHFARDC 195
BLAST of Lsi07G011020.1 vs. NCBI nr
Match:
gi|449456813|ref|XP_004146143.1| (PREDICTED: cold shock domain-containing protein 3-like [Cucumis sativus])
HSP 1 Score: 487.3 bits (1253), Expect = 1.8e-134
Identity = 264/274 (96.35%), Postives = 264/274 (96.35%), Query Frame = 1
Query: 1 MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD
Sbjct: 1 MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
Query: 61 DGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAGG 120
DGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAGG
Sbjct: 61 DGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAGG 120
Query: 121 GGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNS---GGGGGGG 180
GGCYQCGEQGHLARDCTR SNRGGGGGGGGGCFTCGEVGHLARDCPRGNS GGGGGGG
Sbjct: 121 GGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGG 180
Query: 181 AGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIARDCQNESRGS-GG 240
GACYNCGGFGHLARDCNRGGAGGGS GGGGGGGGCFNCGEYGHIARDCQNESRGS GG
Sbjct: 181 GGACYNCGGFGHLARDCNRGGAGGGS--GGGGGGGGCFNCGEYGHIARDCQNESRGSGGG 240
Query: 241 GGGRF--GGGGGGGSNTCFNCGKSGHFARECPDA 269
GGGRF GGGGGGGSNTCFNCGKSGHFARECPDA
Sbjct: 241 GGGRFGGGGGGGGGSNTCFNCGKSGHFARECPDA 272
BLAST of Lsi07G011020.1 vs. NCBI nr
Match:
gi|659095380|ref|XP_008448549.1| (PREDICTED: cold shock domain-containing protein 3 [Cucumis melo])
HSP 1 Score: 485.0 bits (1247), Expect = 8.8e-134
Identity = 262/274 (95.62%), Postives = 263/274 (95.99%), Query Frame = 1
Query: 1 MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD
Sbjct: 1 MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
Query: 61 DGKSKAIEVVALDGSSGNRRDNF---GGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG 120
DGKSKAIEVVALDGSSGNRRDNF GGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG
Sbjct: 61 DGKSKAIEVVALDGSSGNRRDNFGGGGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG 120
Query: 121 AGGGGCYQCGEQGHLARDCTRASNR-GGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG 180
GGGGCYQCGEQGHLARDCTR SNR GGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG
Sbjct: 121 GGGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG 180
Query: 181 GA--GACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIARDCQNESRGS 240
G+ GACYNCGGFGHLARDCNRGGAGGGS GGGGGGGCFNCGEYGHIARDCQNESRGS
Sbjct: 181 GSGGGACYNCGGFGHLARDCNRGGAGGGS---GGGGGGGCFNCGEYGHIARDCQNESRGS 240
Query: 241 GGGGGRFGGGGGGGSNTCFNCGKSGHFARECPDA 269
GGGGGRFGGGGGGGSNTCFNCGKSGHFARECPDA
Sbjct: 241 GGGGGRFGGGGGGGSNTCFNCGKSGHFARECPDA 271
BLAST of Lsi07G011020.1 vs. NCBI nr
Match:
gi|1009144179|ref|XP_015889657.1| (PREDICTED: cold shock protein 2 [Ziziphus jujuba])
HSP 1 Score: 334.3 bits (856), Expect = 1.9e-88
Identity = 196/273 (71.79%), Postives = 218/273 (79.85%), Query Frame = 1
Query: 1 MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
M+EER TG V+WFNDSKGFGFIKPD G DLFVHQSSIKSDG+RSL G+ VEFQIA D
Sbjct: 1 MSEERSTGKVRWFNDSKGFGFIKPDDGGEDLFVHQSSIKSDGFRSLAEGESVEFQIALTD 60
Query: 61 DGKSKAIEVVALDGSS--GNRRDNFGGGGGGRGGRGGGGGGGYGFG-GWRGGDRRNGNSG 120
DGK+KAI+V DGSS GNR+D++GGG RGGRGGGGGGGYGFG GWRG DRRNG G
Sbjct: 61 DGKTKAIDVTGPDGSSVQGNRKDSYGGG---RGGRGGGGGGGYGFGGGWRGSDRRNG-GG 120
Query: 121 AGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGG-CFTCGEVGHLARDCPRGNSGGGGGG 180
AGG GCY CG+ GHLARDC+R + GGGGGGGGG CFTCG GHLARDC +GNSGGGGG
Sbjct: 121 AGGAGCYNCGDPGHLARDCSRGNTGGGGGGGGGGSCFTCGGYGHLARDCLQGNSGGGGGA 180
Query: 181 GAGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIARDCQNESRGSGG 240
G G CY CG +GH+ARDC+RGG+GGG+ GG GG CFNCGE+GH+ARDC R SGG
Sbjct: 181 GGGGCYKCGEYGHMARDCSRGGSGGGA---GGPPGGACFNCGEFGHLARDC---GRPSGG 240
Query: 241 GGGRFGGGGGGGSNTCFNCGKSGHFARECPDAP 270
GGGRFGG GG S C+NCGK GHFARECP+ P
Sbjct: 241 GGGRFGGSGGDAS--CYNCGKPGHFARECPNVP 261
BLAST of Lsi07G011020.1 vs. NCBI nr
Match:
gi|703163431|ref|XP_010113340.1| (Glycine-rich protein 2 [Morus notabilis])
HSP 1 Score: 296.2 bits (757), Expect = 5.8e-77
Identity = 178/280 (63.57%), Postives = 195/280 (69.64%), Query Frame = 1
Query: 1 MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
MAEER TG V+WFNDSKGFGFI PD G DLFVHQSSIKSDG+RSL GD VEFQIA D
Sbjct: 1 MAEERSTGKVRWFNDSKGFGFITPDDGGEDLFVHQSSIKSDGFRSLAEGDTVEFQIAIAD 60
Query: 61 DGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAGG 120
DGK+KA++V GSS GGG GG G GG GGGG+G GGWRGGDRRNG GG
Sbjct: 61 DGKTKAVDVTGPGGSSLQGTKKGGGGRGGGFGGGGFGGGGFG-GGWRGGDRRNGG---GG 120
Query: 121 GGCYQCGEQGHLARDCTRASNR------GGGGGGGGGCFTCGEVGHLARDCPR------G 180
GC+ CG+ GHLARDC R GGGGGGGGGCF+CGE GH+AR+CPR G
Sbjct: 121 SGCFNCGDPGHLARDCDRDRGNNGNFGGGGGGGGGGGCFSCGEFGHMARNCPRASGGAGG 180
Query: 181 NSGGGGGGGAGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIARDCQ 240
GGGGGGG G CY CG FGHLARDCNR GGGGGG GGC+NCGE+GH+AR+C
Sbjct: 181 GVGGGGGGGGGGCYKCGEFGHLARDCNR--------GGGGGGSGGCYNCGEFGHMARECS 240
Query: 241 NESRGSGGGGGRFGGGGGGGSNTCFNCGKSGHFARECPDA 269
S GSGGGG N+C+NCG GHFARECPDA
Sbjct: 241 KASGGSGGGG-----------NSCYNCGNPGHFARECPDA 257
BLAST of Lsi07G011020.1 vs. NCBI nr
Match:
gi|502153508|ref|XP_004509364.1| (PREDICTED: cold shock domain-containing protein 3 [Cicer arietinum])
HSP 1 Score: 290.8 bits (743), Expect = 2.4e-75
Identity = 170/276 (61.59%), Postives = 200/276 (72.46%), Query Frame = 1
Query: 1 MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
MAEER TGVVQWFN+ KGFGFIKPD G DLFVHQSSI+SDG+R+L+ GD+VEF IA GD
Sbjct: 1 MAEERFTGVVQWFNNVKGFGFIKPDDGGEDLFVHQSSIRSDGFRTLLDGDNVEFAIATGD 60
Query: 61 DGKSKAIEVVALDGSS-GNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAG 120
+ K+KA++V L+G+ +R+DN+GGGGGGRG +G GG+RG DRRNG +GAG
Sbjct: 61 NDKTKAVDVTGLNGAPLQSRQDNYGGGGGGRG---------FG-GGFRGNDRRNGGAGAG 120
Query: 121 GGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPR-GNSGGGGGGGA 180
G GCY CG+ GH+AR+C R++N GGGGGGGG C+TCG GH+ARDC R GN+GGG GGG
Sbjct: 121 GAGCYNCGDTGHIARECNRSNNSGGGGGGGGACYTCGAFGHIARDCMRGGNNGGGIGGGI 180
Query: 181 G--ACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIARDCQNE----SR 240
G +CY CGG GH+ARDC G GGGGC+ CGE GHIARDC E
Sbjct: 181 GGTSCYRCGGIGHIARDCATARV--------GSGGGGCYKCGEVGHIARDCSIEGGRFEG 240
Query: 241 GSGGGGGRFGGGGGGGSNTCFNCGKSGHFARECPDA 269
G GG GGGG GG NTCFNCGK GHFAREC +A
Sbjct: 241 GRFGGNNNSGGGGNGGKNTCFNCGKPGHFARECVEA 258
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
CSP3_ARATH | 9.0e-54 | 52.67 | Cold shock domain-containing protein 3 OS=Arabidopsis thaliana GN=CSP3 PE=1 SV=1 | [more] |
CSP1_ARATH | 2.1e-47 | 51.03 | Cold shock protein 1 OS=Arabidopsis thaliana GN=CSP1 PE=1 SV=1 | [more] |
GRP2_NICSY | 3.1e-38 | 51.24 | Glycine-rich protein 2 OS=Nicotiana sylvestris GN=GRP-2 PE=2 SV=1 | [more] |
CSP2_ARATH | 1.1e-32 | 50.75 | Cold shock protein 2 OS=Arabidopsis thaliana GN=CSP2 PE=1 SV=1 | [more] |
CSP4_ARATH | 7.4e-32 | 46.46 | Cold shock domain-containing protein 4 OS=Arabidopsis thaliana GN=CSP4 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0L4X7_CUCSA | 1.2e-134 | 96.35 | Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002765 PE=4 SV=1 | [more] |
E5RDD6_CUCME | 6.1e-134 | 95.62 | Cold-shock DNA-binding family protein OS=Cucumis melo subsp. melo PE=4 SV=1 | [more] |
W9SMZ6_9ROSA | 4.0e-77 | 63.57 | Glycine-rich protein 2 OS=Morus notabilis GN=L484_026671 PE=4 SV=1 | [more] |
V7CFP6_PHAVU | 2.1e-70 | 62.31 | Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G263300g PE=4 SV=1 | [more] |
A0A0S3R460_PHAAN | 6.9e-69 | 60.81 | Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G322400 PE=... | [more] |