Lsi07G011940.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi07G011940.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Glycine-rich protein-1
Location	chr07 : 17441679 .. 17442398 (+)
Sequence length	720

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATCCTTAGAGGGTTATTGTGCCTTTCATTTCTTCTCTTGGTTGGGTTAGGTTTAGCTTCGGCTACCGGAACTCTTCTTGATTATGATTCCCATACACCTCACTATGGTTATGATCGTCCTACTCCAAGAGTAGGGTACGATCCTAGCCATCGTGATGAATCCTATGATAATGCATATGGTGGAAGTTCTAGTAGAGGACATGGAATTGGAGACTCCGCTCTTGGAGGTTCGGGACGATATGAAGGTGGTGGAGGACGTGATTCTGGATACGGAGGTCGAAATGATGATCGTGGGGTTGGATATGGTAATGGTGGTGGATATGGAAGTGTAAGAGGACATGGTGATGGTTATGGTAGCAATGGTGGTGGAGGCTATGGAGATCGTTATGGGCCTTCCCTTGGAGGCTCAGGATATGGAAGTGGCAATGGATATGACCAAGGAAGAGATAATGGTGTGGGTTATGGAAGTAGAGGAGGTAGCAATGGCTATGGTGATTCACGTGACAATGGATATGGAGCACGTGACAATGGCCATGGAGATTCACGTGGATATGGAGCACGTGATAATGGCTATGGAGTCGGAGGTCATGGTGGTGGTCATGATAATAATGGAGGTGTTCATGGAGGACAATATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGCTATGATGGTGGATATGCCGTCAAAAACTCCATCTCAAAGGAGAATTGA

mRNA sequence

ATGGCTATCCTTAGAGGGTTATTGTGCCTTTCATTTCTTCTCTTGGTTGGGTTAGGTTTAGCTTCGGCTACCGGAACTCTTCTTGATTATGATTCCCATACACCTCACTATGGTTATGATCGTCCTACTCCAAGAGTAGGGTACGATCCTAGCCATCGTGATGAATCCTATGATAATGCATATGGTGGAAGTTCTAGTAGAGGACATGGAATTGGAGACTCCGCTCTTGGAGGTTCGGGACGATATGAAGGTGGTGGAGGACGTGATTCTGGATACGGAGGTCGAAATGATGATCGTGGGGTTGGATATGGTAATGGTGGTGGATATGGAAGTGTAAGAGGACATGGTGATGGTTATGGTAGCAATGGTGGTGGAGGCTATGGAGATCGTTATGGGCCTTCCCTTGGAGGCTCAGGATATGGAAGTGGCAATGGATATGACCAAGGAAGAGATAATGGTGTGGGTTATGGAAGTAGAGGAGGTAGCAATGGCTATGGTGATTCACGTGACAATGGATATGGAGCACGTGACAATGGCCATGGAGATTCACGTGGATATGGAGCACGTGATAATGGCTATGGAGTCGGAGGTCATGGTGGTGGTCATGATAATAATGGAGGTGTTCATGGAGGACAATATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGCTATGATGGTGGATATGCCGTCAAAAACTCCATCTCAAAGGAGAATTGA

Coding sequence (CDS)

ATGGCTATCCTTAGAGGGTTATTGTGCCTTTCATTTCTTCTCTTGGTTGGGTTAGGTTTAGCTTCGGCTACCGGAACTCTTCTTGATTATGATTCCCATACACCTCACTATGGTTATGATCGTCCTACTCCAAGAGTAGGGTACGATCCTAGCCATCGTGATGAATCCTATGATAATGCATATGGTGGAAGTTCTAGTAGAGGACATGGAATTGGAGACTCCGCTCTTGGAGGTTCGGGACGATATGAAGGTGGTGGAGGACGTGATTCTGGATACGGAGGTCGAAATGATGATCGTGGGGTTGGATATGGTAATGGTGGTGGATATGGAAGTGTAAGAGGACATGGTGATGGTTATGGTAGCAATGGTGGTGGAGGCTATGGAGATCGTTATGGGCCTTCCCTTGGAGGCTCAGGATATGGAAGTGGCAATGGATATGACCAAGGAAGAGATAATGGTGTGGGTTATGGAAGTAGAGGAGGTAGCAATGGCTATGGTGATTCACGTGACAATGGATATGGAGCACGTGACAATGGCCATGGAGATTCACGTGGATATGGAGCACGTGATAATGGCTATGGAGTCGGAGGTCATGGTGGTGGTCATGATAATAATGGAGGTGTTCATGGAGGACAATATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGCTATGATGGTGGATATGCCGTCAAAAACTCCATCTCAAAGGAGAATTGA

Protein sequence

MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRGVGYGNGGGYGSVRGHGDGYGSNGGGGYGDRYGPSLGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSRDNGYGARDNGHGDSRGYGARDNGYGVGGHGGGHDNNGGVHGGQYDNSKGSGEEGGYDGGYAVKNSISKEN

Homology

[Close]

BLAST of Lsi07G011940.1 vs. TrEMBL
Match: A0A0A0L1V3_CUCSA (Glycine-rich protein-1 OS=Cucumis sativus GN=Csa_3G011070 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 8.0e-69
Identity = 175/240 (72.92%), Postives = 185/240 (77.08%), Query Frame = 1


Query: 1   MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNA 60
           MAILR L CL+FLL V LGLASAT TLLDYD  T  YGYDRP+PRVGYDP H DESYD A
Sbjct: 1   MAILRAL-CLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKA 60

Query: 61  YGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRGVGYGN-GGGYGSVRGHGDGY 120
           YGGSSSRGHGIGDSALGGSG YEGGG  D GYG R++DRGVGYGN GGGYG V GHGDGY
Sbjct: 61  YGGSSSRGHGIGDSALGGSG-YEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGDGY 120

Query: 121 GSNGGGGYGDRYGPSLGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSRDNGYGARDNG 180
           G+NGGG YGDRYGPSLGGSGYGS              G +G  NGY D    G GARDN 
Sbjct: 121 GNNGGGSYGDRYGPSLGGSGYGS--------------GGKGSGNGY-DDHSRGNGARDNS 180

Query: 181 HGDSRGYGARDNGYGVGGHGGGHDNNGGVHGGQYDNSKGSGEEGGYDGGYAVKNSISKEN 240
           +GDS G+G RD+GYG GG   G   NGGVHGG+YDNSKGSGEEGGYDGGYAVKNSISK N
Sbjct: 181 YGDSHGHGGRDSGYGSGGGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

[Close]

BLAST of Lsi07G011940.1 vs. TrEMBL
Match: A0A0A0L6H2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G010060 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.2e-28
Identity = 128/244 (52.46%), Postives = 142/244 (58.20%), Query Frame = 1


Query: 1   MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNA 60
           MAI R +LC+ FLL VGLGLASAT TLLDYD     Y YD PTPRVGYDPSHRD+SYDNA
Sbjct: 1   MAISR-VLCIGFLLFVGLGLASATRTLLDYDPRARRYDYDHPTPRVGYDPSHRDQSYDNA 60

Query: 61  YGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRGVGYG-----NGGGYGSVRGH 120
           Y GSSS+G+GIGDS LGGSGRY GG G DSGYGGRNDDRGVGYG        GYG   G 
Sbjct: 61  YSGSSSKGYGIGDSTLGGSGRYGGGKGHDSGYGGRNDDRGVGYGGRNDDRSTGYG---GR 120

Query: 121 GDGYGSNGGGGYGDRYGPSLGGSGYGSGNGYDQGRDNGVGYGSRGG--SNGYG---DSRD 180
            D      GG   DR      G+GYG  N      D   GYG R    S+GYG   D R 
Sbjct: 121 NDDRSDGYGGRNDDR------GAGYGGRND-----DRSDGYGGRNDDRSDGYGGRNDDRS 180

Query: 181 NGYGARDNGHGDSRGYGARDNGYGVGGHGGGHDNNGGVHGGQYDNSKG-SGEEGGYDGGY 234
           +GYG R++   D  GYG R++    G  G   D + G  G   D S G  G       GY
Sbjct: 181 DGYGGRNDDRSD--GYGGRNDDRSDGYGGRNDDRSDGYGGRNDDRSDGYGGRNDDRSDGY 227

[Close]

BLAST of Lsi07G011940.1 vs. TrEMBL
Match: A0A0A0L190_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G010050 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 6.9e-20
Identity = 62/87 (71.26%), Postives = 67/87 (77.01%), Query Frame = 1


Query: 1  MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNA 60
          MAI R +LC+ FLL VGLGLASAT TLLDYD     Y YDRPTPRVGYDPSHRD+SYDN 
Sbjct: 1  MAISR-VLCIGFLLFVGLGLASATRTLLDYDPRARRYDYDRPTPRVGYDPSHRDQSYDNV 60

Query: 61 YGGSSSRGHGIGDSALGGSGRYEGGGG 88
          YGGSSSRG+G GDSALG     + G G
Sbjct: 61 YGGSSSRGYGAGDSALGAKEVEKKGVG 86

[Close]

BLAST of Lsi07G011940.1 vs. TrEMBL
Match: A0A0A0L1U7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G009540 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.3e-15
Identity = 121/264 (45.83%), Postives = 133/264 (50.38%), Query Frame = 1


Query: 8   LCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDR-----PTPRVGYDPSHRDESY----- 67
           L   FLLLV LGLASA  +LL YD      GYD        P+VGY+   RD  Y     
Sbjct: 7   LSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGYYHDRDH 66

Query: 68  -DNAYGGSSSRGHGIG---DSALGGSGRYEGGGGRDSGYGGRNDDRGVGYGNGG------ 127
            D  YGG +  G+G G    S+LGGSG Y  GGG  SGYGG  +   VGYG+GG      
Sbjct: 67  HDAPYGGGAGGGYGAGAGAGSSLGGSG-YGSGGGGGSGYGGVGNHE-VGYGSGGGGGYGA 126

Query: 128 ---------GYGSVRGHGDGYGSNGGGGYGDRYGPSLG-GSGYGSGNGYDQGRDNGVGYG 187
                    GYGS      G G   GGGYGD  G   G GSG G G+GY    D+GVGYG
Sbjct: 127 GVGSDLGGSGYGS------GGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYG 186

Query: 188 SRGGSNGYGDSRDNGYGARDN--------GHGDSRGYGARDNGYGVG-GHGGGHDNNGGV 231
           S GG  GYG     G G  D+        G G   GYG    GYG G G GGG    GG 
Sbjct: 187 S-GGGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGG-SKGYGGGSGGGGGAGYGGGA 246

[Close]

BLAST of Lsi07G011940.1 vs. TrEMBL
Match: Q9ZWM2_CUCSA (Glycine-rich protein-2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.9e-15
Identity = 121/264 (45.83%), Postives = 133/264 (50.38%), Query Frame = 1


Query: 8   LCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDR-----PTPRVGYDPSHRDESY----- 67
           L   FLLLV LGLASA  +LL YD      GYD        P+VGY+   RD  Y     
Sbjct: 7   LSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGYYHDRDH 66

Query: 68  -DNAYGGSSSRGHGIG---DSALGGSGRYEGGGGRDSGYGGRNDDRGVGYGNGG------ 127
            D  YGG +  G+G G    S+LGGSG Y  GGG  SGYGG  +   VGYG+GG      
Sbjct: 67  HDAPYGGGAGGGYGAGAGAGSSLGGSG-YGSGGGGGSGYGGVGNHE-VGYGSGGGGGYGA 126

Query: 128 ---------GYGSVRGHGDGYGSNGGGGYGDRYGPSLG-GSGYGSGNGYDQGRDNGVGYG 187
                    GYGS      G G   GGGYGD  G   G GSG G G+GY    D+GVGYG
Sbjct: 127 GVGSDLGGSGYGS------GGGGGTGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYG 186

Query: 188 SRGGSNGYGDSRDNGYGARDN--------GHGDSRGYGARDNGYGVG-GHGGGHDNNGGV 231
           S GG  GYG     G G  D+        G G   GYG    GYG G G GGG    GG 
Sbjct: 187 S-GGGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGG-SKGYGGGSGGGGGAGYGGGA 246

[Close]

BLAST of Lsi07G011940.1 vs. NCBI nr
Match: gi|659096568|ref|XP_008449165.1| (PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo])

HSP 1 Score: 295.8 bits (756), Expect = 6.7e-77
Identity = 182/239 (76.15%), Postives = 192/239 (80.33%), Query Frame = 1


Query: 1   MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNA 60
           MAILR L CL+FLL VGLGLASAT TLLDYD  T HYGYDRP+PRVGYDP HRDESYDNA
Sbjct: 1   MAILRAL-CLAFLLFVGLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNA 60

Query: 61  YGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRGVGYGNGGGYGSVRGHGDGYG 120
           YGGSSSRGHGIGDSALGGSG YEGGG RD GYG RND+RGVGYGNGGGYG V GHGDGYG
Sbjct: 61  YGGSSSRGHGIGDSALGGSG-YEGGGRRDYGYGDRNDNRGVGYGNGGGYGGVGGHGDGYG 120

Query: 121 SNGGGGYGDRYGPSLGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSRDNGYGARDNGH 180
           +NGGGGYGDRYGPSLGGSGYGS              G +G  NGY D   +GYG RDNG+
Sbjct: 121 NNGGGGYGDRYGPSLGGSGYGS--------------GGKGSDNGYDDRHSHGYGGRDNGY 180

Query: 181 GDSRGYGARDNGYGVGGHGGGHDNNGGVHGGQYDNSKGSGEEGGYDGGYAVKNSISKEN 240
           GDS G+  RD+GYG GG   G   NGGVHGG+YDNSKGSGEEGGYDGGYAVKNSISK N
Sbjct: 181 GDSHGHEGRDSGYGSGGGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

[Close]

BLAST of Lsi07G011940.1 vs. NCBI nr
Match: gi|778688294|ref|XP_011652712.1| (PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis sativus])

HSP 1 Score: 268.5 bits (685), Expect = 1.1e-68
Identity = 175/240 (72.92%), Postives = 185/240 (77.08%), Query Frame = 1


Query: 1   MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNA 60
           MAILR L CL+FLL V LGLASAT TLLDYD  T  YGYDRP+PRVGYDP H DESYD A
Sbjct: 1   MAILRAL-CLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKA 60

Query: 61  YGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRGVGYGN-GGGYGSVRGHGDGY 120
           YGGSSSRGHGIGDSALGGSG YEGGG  D GYG R++DRGVGYGN GGGYG V GHGDGY
Sbjct: 61  YGGSSSRGHGIGDSALGGSG-YEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGDGY 120

Query: 121 GSNGGGGYGDRYGPSLGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSRDNGYGARDNG 180
           G+NGGG YGDRYGPSLGGSGYGS              G +G  NGY D    G GARDN 
Sbjct: 121 GNNGGGSYGDRYGPSLGGSGYGS--------------GGKGSGNGY-DDHSRGNGARDNS 180

Query: 181 HGDSRGYGARDNGYGVGGHGGGHDNNGGVHGGQYDNSKGSGEEGGYDGGYAVKNSISKEN 240
           +GDS G+G RD+GYG GG   G   NGGVHGG+YDNSKGSGEEGGYDGGYAVKNSISK N
Sbjct: 181 YGDSHGHGGRDSGYGSGGGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

[Close]

BLAST of Lsi07G011940.1 vs. NCBI nr
Match: gi|659095616|ref|XP_008448676.1| (PREDICTED: glycine-rich cell wall structural protein 2-like isoform X1 [Cucumis melo])

HSP 1 Score: 227.6 bits (579), Expect = 2.2e-56
Identity = 174/267 (65.17%), Postives = 189/267 (70.79%), Query Frame = 1


Query: 1   MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNA 60
           MA+ RGL  LSFLLLVGLGLASA  TLLDYD  T +YGYDRPTPRVGYDPSHRDESYDN 
Sbjct: 1   MAVHRGLY-LSFLLLVGLGLASAARTLLDYDPRTRYYGYDRPTPRVGYDPSHRDESYDNV 60

Query: 61  YGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRGVGYGNGGGYGSVRGHGDGYG 120
           YGGSSS+GHGIGDSALGGS   E  GGR   YGGRNDD GVGYGNGGGYGSV GHGDGYG
Sbjct: 61  YGGSSSKGHGIGDSALGGS---EHEGGRHYQYGGRNDDHGVGYGNGGGYGSVGGHGDGYG 120

Query: 121 SNGGGGYGDRYGPSLGGSGYGSGNGYDQG-RDNGVGYGSRGG-SNGYGDSRDNGYGARDN 180
           +NGGGG+GD YG +  G GYGS  G+  G  +NG GYGS GG  +GYG++   GYG+   
Sbjct: 121 NNGGGGHGDGYGNN--GGGYGSVGGHGDGYGNNGGGYGSVGGHGDGYGNN-GGGYGS-VG 180

Query: 181 GHGD------SRGYGAR------DNGYG-VGGHGGGHD-------------NNGGVHGGQ 240
           GHGD        GYG R       +GYG  GG G G+               NGGVH G+
Sbjct: 181 GHGDGYGNNGGGGYGDRYGPSLGGSGYGSSGGKGSGNGYGDSSHGYGSGGYGNGGVHEGE 240

[Close]

BLAST of Lsi07G011940.1 vs. NCBI nr
Match: gi|659096566|ref|XP_008449164.1| (PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis melo])

HSP 1 Score: 182.6 bits (462), Expect = 8.3e-43
Identity = 157/316 (49.68%), Postives = 171/316 (54.11%), Query Frame = 1


Query: 1   MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNA 60
           MAI R L C+SFLL V LGLASA  TLLDYD  T  Y YD PTPRVGYDPSHRD+SYDNA
Sbjct: 1   MAISRAL-CISFLLFVCLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNA 60

Query: 61  YGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRGVGYGNGGGYGSVRGHGDGYG 120
           YGGSS+RG+G+GDSALGGSGRYEGGGG D GYGGRNDDRGVGYG     G    HG GYG
Sbjct: 61  YGGSSNRGYGVGDSALGGSGRYEGGGGHDYGYGGRNDDRGVGYG-----GRNDDHGAGYG 120

Query: 121 SNGGGGYGDRYGPSLGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYG-----DSRDNGYGA 180
           +  GG   DR      G+GYG  N      D G GYG R   +G G     D R  GYG 
Sbjct: 121 AGYGGRNDDR------GAGYGGRND-----DRGAGYGRRNDDHGAGYGGRNDDRGAGYGG 180

Query: 181 RDN----GHGDSRGYGARDNGYGVGGHGGGHDNN--GGV--------------------- 240
           R++    G+G+  GYG      GVGGHG G+ NN  GG                      
Sbjct: 181 RNDDRGVGYGNGGGYG------GVGGHGDGYGNNVGGGYGDRYSPSLGGSGYGNGGKGSG 240

[Close]

BLAST of Lsi07G011940.1 vs. NCBI nr
Match: gi|700200618|gb|KGN55751.1| (hypothetical protein Csa_3G010060 [Cucumis sativus])

HSP 1 Score: 132.9 bits (333), Expect = 7.5e-28
Identity = 128/244 (52.46%), Postives = 142/244 (58.20%), Query Frame = 1


Query: 1   MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNA 60
           MAI R +LC+ FLL VGLGLASAT TLLDYD     Y YD PTPRVGYDPSHRD+SYDNA
Sbjct: 1   MAISR-VLCIGFLLFVGLGLASATRTLLDYDPRARRYDYDHPTPRVGYDPSHRDQSYDNA 60

Query: 61  YGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRGVGYG-----NGGGYGSVRGH 120
           Y GSSS+G+GIGDS LGGSGRY GG G DSGYGGRNDDRGVGYG        GYG   G 
Sbjct: 61  YSGSSSKGYGIGDSTLGGSGRYGGGKGHDSGYGGRNDDRGVGYGGRNDDRSTGYG---GR 120

Query: 121 GDGYGSNGGGGYGDRYGPSLGGSGYGSGNGYDQGRDNGVGYGSRGG--SNGYG---DSRD 180
            D      GG   DR      G+GYG  N      D   GYG R    S+GYG   D R 
Sbjct: 121 NDDRSDGYGGRNDDR------GAGYGGRND-----DRSDGYGGRNDDRSDGYGGRNDDRS 180

Query: 181 NGYGARDNGHGDSRGYGARDNGYGVGGHGGGHDNNGGVHGGQYDNSKG-SGEEGGYDGGY 234
           +GYG R++   D  GYG R++    G  G   D + G  G   D S G  G       GY
Sbjct: 181 DGYGGRNDDRSD--GYGGRNDDRSDGYGGRNDDRSDGYGGRNDDRSDGYGGRNDDRSDGY 227

The following BLAST results are available for this feature:

BLAST of Lsi07G011940.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi07G011940.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1V3_CUCSA	8.0e-69	72.92	Glycine-rich protein-1 OS=Cucumis sativus GN=Csa_3G011070 PE=4 SV=1	[more]
A0A0A0L6H2_CUCSA	5.2e-28	52.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G010060 PE=4 SV=1	[more]
A0A0A0L190_CUCSA	6.9e-20	71.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G010050 PE=4 SV=1	[more]
A0A0A0L1U7_CUCSA	2.3e-15	45.83	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G009540 PE=4 SV=1	[more]
Q9ZWM2_CUCSA	3.9e-15	45.83	Glycine-rich protein-2 (Fragment) OS=Cucumis sativus PE=2 SV=1	[more]

BLAST of Lsi07G011940.1 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Lsi07G011940.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659096568\|ref\|XP_008449165.1\|	6.7e-77	76.15	PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo]	[more]
gi\|778688294\|ref\|XP_011652712.1\|	1.1e-68	72.92	PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis sativus]	[more]
gi\|659095616\|ref\|XP_008448676.1\|	2.2e-56	65.17	PREDICTED: glycine-rich cell wall structural protein 2-like isoform X1 [Cucumis ...	[more]
gi\|659096566\|ref\|XP_008449164.1\|	8.3e-43	49.68	PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis melo]	[more]
gi\|700200618\|gb\|KGN55751.1\|	7.5e-28	52.46	hypothetical protein Csa_3G010060 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi07G011940	Lsi07G011940	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi07G011940.1.CDS.1	Lsi07G011940.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi07G011940.1	Lsi07G011940.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01228	EGGSHELL	coord: 5..21 score: 2.9E-5coord: 196..214 score: 2.9E-5coord: 132..147 score: 2.9E-5coord: 160..170 score: 2.