Lsi09G009990.1 (mRNA) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGTTGGGTGTCACGACACACAAGAGGTCGGTGTCATGGTACACACAGGGTGGTTGTCCCAGGTGGGTGTCACGACACATTCTTTAGACAAAATAGGTAATGTTTTGTTGGAACGATCATTTTACGACTGTTAGTTCATAACACAAATTTCAATATAACACAATACAAACACCATAAGTTAGTTATACGTTCAACGTTGGGTGTATGATTAATGTGTGGCATTGATGGACTAGATAGTCAAGCTTAAATATTATTAGACTACACAATGGTTCACTTCAACAATGTGCGACTGCAAAGCCAGTCTACTTGATATACACTCGACTTGATACGCGGAGAGGTGCAAGGTGGGTGAGCAGGCGCGGGGGTGGGGCAGGTGGGCATGGGCGCCCACAGAGTGCAAGATTGGTGGGCATGGGGCGCGCGTGGGTTGGGCAAGGTGGGCATGGCATTGAGCAGGTGCGGGGCTGGGTGGGCATGGGATGCGTGCGGGGTGGGCATGGGGGGTGCCGGTGAGGTGGAGCTGGGTGGGCGCGCAGGGTGCAAGGTGGGTGGGCATGGGCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGGCGCCCATGCAAGCACATCCACTCGCCAACACTTAGGCTTTCTTTTCTTTCTACTTAGCATATAACCTCTATGACACTTGAAATAAATAAATGAGTTGTGTGTGGGGAGGGACGAATCGGAGCGACGAAGGGCTGAATCTCAGTGGATCGTGGCAGCAAGGCCACTCTGCCACTTACAATACCCTGTCGCGTATTTAAGTCGTCTGCAAAGGATTCTACCCGTCGCTCGGTGGAAATTACGTTACAAGGCGGCCCCCGCGACTCATCCGTCACGAGGGCTTAGCCAACGACACGTGCCTTTGGGGGCCGGACGGCCCCTACTGCTGGTCGGCAATCGAGCGATGGGCGCATGCGTCGCTTCTAGCCCGGATTCTGACTTAGAGGCGTTCAGTCATAATCCAGCGCACGGTAGCTTCGCGCCACTGGCTTTTCAACCAAGCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCGTACTAG ATGGGTGTTGGGTGTCACGACACACAAGAGGTCGGTGTCATGGTACACACAGGGTGGTTGTCCCAGGTGGGTGTCACGACACATTCTTTAGACAAAATAGTCTACTTGATATACACTCGACTTGATACGCGGAGAGGTGCAAGGTGGGTGAGCAGGCGCGGGGGTGGGGCAGGTGGGCATGGGCGCCCACAGAGTGCAAGATTGGTGGGCATGGGGCGCGCGTGGGTTGGGCAAGGTGGGCATGGCATTGAGCAGGTGCGGGGCTGGGTGGGCATGGGATGCGTGCGGGGTGGGCATGGGGGGTGCCGGGACGAATCGGAGCGACGAAGGGCTGAATCTCAGTGGATCGTGGCAGCAAGGCCACTCTGCCACTTACAATACCCTGTCGCGTATTTAAGTCGTCTGCAAAGGATTCTACCCGTCGCTCGGTGGAAATTACGTTACAAGGCGGCCCCCGCGACTCATCCGTCACGAGGGCTTAGCCAACGACACGTGCCTTTGGGGGCCGGACGGCCCCTACTGCTGGTCGGCAATCGAGCGATGGGCGCATGCGTCGCTTCTAGCCCGGATTCTGACTTAGAGGCGTTCAGTCATAATCCAGCGCACGGTAGCTTCGCGCCACTGGCTTTTCAACCAAGCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCGTACTAG ATGGGTGTTGGGTGTCACGACACACAAGAGGTCGGTGTCATGGTACACACAGGGTGGTTGTCCCAGGTGGGTGTCACGACACATTCTTTAGACAAAATAGTCTACTTGATATACACTCGACTTGATACGCGGAGAGGTGCAAGGTGGGTGAGCAGGCGCGGGGGTGGGGCAGGTGGGCATGGGCGCCCACAGAGTGCAAGATTGGTGGGCATGGGGCGCGCGTGGGTTGGGCAAGGTGGGCATGGCATTGAGCAGGTGCGGGGCTGGGTGGGCATGGGATGCGTGCGGGGTGGGCATGGGGGGTGCCGGGACGAATCGGAGCGACGAAGGGCTGAATCTCAGTGGATCGTGGCAGCAAGGCCACTCTGCCACTTACAATACCCTGTCGCGTATTTAAGTCGTCTGCAAAGGATTCTACCCGTCGCTCGGTGGAAATTACGTTACAAGGCGGCCCCCGCGACTCATCCGTCACGAGGGCTTAGCCAACGACACGTGCCTTTGGGGGCCGGACGGCCCCTACTGCTGGTCGGCAATCGAGCGATGGGCGCATGCGTCGCTTCTAGCCCGGATTCTGACTTAGAGGCGTTCAGTCATAATCCAGCGCACGGTAGCTTCGCGCCACTGGCTTTTCAACCAAGCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCGTACTAG MGVGCHDTQEVGVMVHTGWLSQVGVTTHSLDKIVYLIYTRLDTRRGARWVSRRGGGAGGHGRPQSARLVGMGRAWVGQGGHGIEQVRGWVGMGCVRGGHGGCRDESERRRAESQWIVAARPLCHLQYPVAYLSRLQRILPVARWKLRYKAAPATHPSRGLSQRHVPLGAGRPLLLVGNRAMGACVASSPDSDLEAFSHNPAHGSFAPLAFQPSAMTNCANQRFLSY
BLAST of Lsi09G009990.1 vs. TrEMBL
Match: I1LXT0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 8.7e-41 Identity = 87/108 (80.56%), Postives = 91/108 (84.26%), Query Frame = 1
BLAST of Lsi09G009990.1 vs. TrEMBL
Match: I1LXQ4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 8.7e-41 Identity = 87/108 (80.56%), Postives = 91/108 (84.26%), Query Frame = 1
BLAST of Lsi09G009990.1 vs. TrEMBL
Match: I1LXS9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 8.7e-41 Identity = 87/108 (80.56%), Postives = 91/108 (84.26%), Query Frame = 1
BLAST of Lsi09G009990.1 vs. TrEMBL
Match: A0A0P6CHZ2_9CRUS (Uncharacterized protein (Fragment) OS=Daphnia magna PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 1.1e-32 Identity = 74/91 (81.32%), Postives = 76/91 (83.52%), Query Frame = 1
BLAST of Lsi09G009990.1 vs. TrEMBL
Match: W1PVN2_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00191p00039450 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 7.6e-29 Identity = 82/141 (58.16%), Postives = 84/141 (59.57%), Query Frame = 1
BLAST of Lsi09G009990.1 vs. NCBI nr
Match: gi|548854219|gb|ERN12143.1| (hypothetical protein AMTR_s00191p00039450 [Amborella trichopoda]) HSP 1 Score: 135.6 bits (340), Expect = 1.1e-28 Identity = 82/141 (58.16%), Postives = 84/141 (59.57%), Query Frame = 1
BLAST of Lsi09G009990.1 vs. NCBI nr
Match: gi|954297013|gb|KRX86393.1| (hypothetical protein T12_13365, partial [Trichinella patagoniensis]) HSP 1 Score: 120.2 bits (300), Expect = 4.8e-24 Identity = 58/60 (96.67%), Postives = 58/60 (96.67%), Query Frame = 1
BLAST of Lsi09G009990.1 vs. NCBI nr
Match: gi|966068351|gb|KTE89979.1| (hypothetical protein AT727_24830 [Desulfitobacterium hafniense]) HSP 1 Score: 115.5 bits (288), Expect = 1.2e-22 Identity = 56/60 (93.33%), Postives = 56/60 (93.33%), Query Frame = 1
BLAST of Lsi09G009990.1 vs. NCBI nr
Match: gi|922327141|ref|XP_013442963.1| (senescence-associated protein, putative [Medicago truncatula]) HSP 1 Score: 113.2 bits (282), Expect = 5.8e-22 Identity = 54/74 (72.97%), Postives = 58/74 (78.38%), Query Frame = 1
BLAST of Lsi09G009990.1 vs. NCBI nr
Match: gi|947015817|gb|KRG68575.1| (hypothetical protein GLYMA_U007400 [Glycine max]) HSP 1 Score: 105.5 bits (262), Expect = 1.2e-19 Identity = 52/72 (72.22%), Postives = 56/72 (77.78%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
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