Lsi09G009980.1 (mRNA) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCCGGGCTCGCGCCCAAGGTTTTGCAGCGACCGTCGCGCCCTCCTACTCATCGGGGCCTGGCTCTTGCCCCGACGGCCGGGTATAGGTCGCGCGCTTCAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGATCTAGGTTAGCGCGCAGTTAGGCACCGTAACCCGGCTTCCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCTCTCGATTCCGTGGCGCGGCTCAACAAAGCAGCCGCGCCGTCCTACCTATTTAAAGTTTGAGAATAGGTCGAGGGCGTTGCGCCCCCGATGCCTCTAATCATTGGCTTTACCCGATAGAACTCGCCCGCGGGCTCCAGCTATCCTGAGGGAAACTTCGGAGGGAACCAGCTACTAGACGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTGCGGGCCTCCACCAGAGTTTCCTCTGGCTTCGCCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGCATGCTCACACTCGAACCCTTCTCAGAAGATCAAGGTCGGTCGGTGGTGCAACCCACTAGGGGATCCCACCAGTCAGCTTCCTTGCGCCTTACGGGTTTACTCGCCCGTTAACTCGCACACATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAGGAGCGCGCAGATGCCGAAGCCCGCCCGAAGGCGCGCGCTGCCAGCCACGATCGGGACGACGACGTCTCCACAGGCGTAACAAAGGCCTGGGCTTAG ATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCCGGGCTCGCGCCCAAGGTTTTGCAGCGACCGTCGCGCCCTCCTACTCATCGGGGCCTGGCTCTTGCCCCGACGGCCGGGTATAGGTCGCGCGCTTCAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGTATCGCTGCGGGCCTCCACCAGAGTTTCCTCTGGCTTCGCCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGCATGCTCACACTCGAACCCTTCTCAGAAGATCAAGGTCGGTCGGTGGTGCAACCCACTAGGGGATCCCACCAGTCAGCTTCCTTGCGCCTTACGGGTTTACTCGCCCGTTAACTCGCACACATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAGGAGCGCGCAGATGCCGAAGCCCGCCCGAAGGCGCGCGCTGCCAGCCACGATCGGGACGACGACGTCTCCACAGGCGTAACAAAGGCCTGGGCTTAG ATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCCGGGCTCGCGCCCAAGGTTTTGCAGCGACCGTCGCGCCCTCCTACTCATCGGGGCCTGGCTCTTGCCCCGACGGCCGGGTATAGGTCGCGCGCTTCAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGTATCGCTGCGGGCCTCCACCAGAGTTTCCTCTGGCTTCGCCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGCATGCTCACACTCGAACCCTTCTCAGAAGATCAAGGTCGGTCGGTGGTGCAACCCACTAGGGGATCCCACCAGTCAGCTTCCTTGCGCCTTACGGGTTTACTCGCCCGTTAACTCGCACACATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAGGAGCGCGCAGATGCCGAAGCCCGCCCGAAGGCGCGCGCTGCCAGCCACGATCGGGACGACGACGTCTCCACAGGCGTAACAAAGGCCTGGGCTTAG MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSSGFAPLRHSSPSFGSRQACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDRDDDVSTGVTKAWA
BLAST of Lsi09G009980.1 vs. TrEMBL
Match: A0A0D2ZUF1_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 6.0e-62 Identity = 129/192 (67.19%), Postives = 144/192 (75.00%), Query Frame = 1
BLAST of Lsi09G009980.1 vs. TrEMBL
Match: M4FJ68_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 1.1e-55 Identity = 118/176 (67.05%), Postives = 129/176 (73.30%), Query Frame = 1
BLAST of Lsi09G009980.1 vs. TrEMBL
Match: A0A0R0GH91_SOYBN (Uncharacterized protein (Fragment) OS=Glycine max GN=GLYMA_13G015000 PE=4 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 3.8e-48 Identity = 102/147 (69.39%), Postives = 108/147 (73.47%), Query Frame = 1
BLAST of Lsi09G009980.1 vs. TrEMBL
Match: M1DZ24_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400046276 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.5e-41 Identity = 87/101 (86.14%), Postives = 93/101 (92.08%), Query Frame = 1
BLAST of Lsi09G009980.1 vs. TrEMBL
Match: A0A0A0KWL1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G243140 PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 5.9e-41 Identity = 80/82 (97.56%), Postives = 80/82 (97.56%), Query Frame = 1
BLAST of Lsi09G009980.1 vs. NCBI nr
Match: gi|947068886|gb|KRH17777.1| (hypothetical protein GLYMA_13G015000, partial [Glycine max]) HSP 1 Score: 199.5 bits (506), Expect = 5.4e-48 Identity = 102/147 (69.39%), Postives = 108/147 (73.47%), Query Frame = 1
BLAST of Lsi09G009980.1 vs. NCBI nr
Match: gi|700198832|gb|KGN53990.1| (hypothetical protein Csa_4G243140 [Cucumis sativus]) HSP 1 Score: 175.6 bits (444), Expect = 8.4e-41 Identity = 80/82 (97.56%), Postives = 80/82 (97.56%), Query Frame = 1
BLAST of Lsi09G009980.1 vs. NCBI nr
Match: gi|902213626|gb|KNA17311.1| (hypothetical protein SOVF_081120 [Spinacia oleracea]) HSP 1 Score: 162.9 bits (411), Expect = 5.6e-37 Identity = 75/82 (91.46%), Postives = 76/82 (92.68%), Query Frame = 1
BLAST of Lsi09G009980.1 vs. NCBI nr
Match: gi|253759791|ref|XP_002488947.1| (hypothetical protein SORBIDRAFT_1368s002010, partial [Sorghum bicolor]) HSP 1 Score: 158.3 bits (399), Expect = 1.4e-35 Identity = 73/82 (89.02%), Postives = 74/82 (90.24%), Query Frame = 1
BLAST of Lsi09G009980.1 vs. NCBI nr
Match: gi|947068858|gb|KRH17749.1| (hypothetical protein GLYMA_13G012400 [Glycine max]) HSP 1 Score: 154.8 bits (390), Expect = 1.5e-34 Identity = 108/233 (46.35%), Postives = 125/233 (53.65%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
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