Lsi09G009950.1 (mRNA) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAGGAGCGCGCAGATGCCGAAGCCCGCCCGAAGGCGCGCGCTACCAGCCACGATCGGGACGACGACGTCTCCATAAGCGTAACAAAGGCCTGGGCTTAGGCCGCCGTCTCAATCCGCATCGGTCCATGCCCCAAGTCGATCGGCAGACCGGCTCATCACCGTTCCACATCCGACTGGGGCACATCGTCGGCCGCCATTCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAACGTCATTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCCTGGTGCGACAGGGTCCGAGCACAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGATTACAATTCGGACGTCGAGGCCGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTGTAAGTTTCTTTTCCTCCGCTTATTGATATGCTTAAACTCAGCGGGTAGTCCCGCCTGACCTGGGGTCGCGTCGAGAGCGTCGTCCTTTGGGAGACGACGTTCAGAAGGTCGGTGTAGGAGTCCACAAGGAGGCGGCGTCAAAAATGGTTCATGATCTATATAGTTTCGAAGCACCAATATACAGTTGGGTGTTGACGATTATGAGCAACATATAGATGACAACGGTAAAACAACTTCCAATTATTTTGAAGTTTTGAAAAACTTTTCTTAACCAATTTAAAGCAAAAGAAATCCTAATAGATTCAAATATGCCTTGCTAATTAAACTAGAATTGTTACTTTTGATATGTCACATACAGCAATCTCTAAAAAATGGTTCTTTTGATAGGTCGCTCCCCACGTAGTACATTTTGGACAATGGTTGGCCAAGCACGCGTGCATCCACCCGAGGCTATCAAGTATATTCCAAATAAAATATTGGTTTACATTGTTGATTCGTATAAATGA ATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAGGAGCGCGCAGATGCCGAAGCCCGCCCGAAGGCGCGCGCTACCAGCCACGATCGGGACGACGACGTCTCCATAAGCGTAACAAAGGCCTGGGCTTAGGCCGCCGTCTCAATCCGCATCGGTCCATGCCCCAAGTCGATCGGCAGACCGGCTCATCACCGTTCCACATCCGACTGGGGCACATCGTCGGCCGCCATTCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAACGTCATTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCCTGGTGCGACAGGGTCCGAGCACAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGATTACAATTCGGACGTCGAGGCCGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTCGGGTAGTCCCGCCTGACCTGGGGTCGCGTCGAGAGCGTCGTCCTTTGGGAGACGACGTTCAGAAGGTCGGTGTAGGAGTCCACAAGGAGGCGGCGTCAAAAATGGTTCATGATCTATATAGTTTCGAAGCACCAATATACAGTCGCTCCCCACGTAGTACATTTTGGACAATGGTTGGCCAAGCACGCGTGCATCCACCCGAGGCTATCAAGTATATTCCAAATAAAATATTGGTTTACATTGTTGATTCGTATAAATGA ATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAGGAGCGCGCAGATGCCGAAGCCCGCCCGAAGGCGCGCGCTACCAGCCACGATCGGGACGACGACGTCTCCATAAGCGTAACAAAGGCCTGGGCTTAGGCCGCCGTCTCAATCCGCATCGGTCCATGCCCCAAGTCGATCGGCAGACCGGCTCATCACCGTTCCACATCCGACTGGGGCACATCGTCGGCCGCCATTCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAACGTCATTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCCTGGTGCGACAGGGTCCGAGCACAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGATTACAATTCGGACGTCGAGGCCGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTCGGGTAGTCCCGCCTGACCTGGGGTCGCGTCGAGAGCGTCGTCCTTTGGGAGACGACGTTCAGAAGGTCGGTGTAGGAGTCCACAAGGAGGCGGCGTCAAAAATGGTTCATGATCTATATAGTTTCGAAGCACCAATATACAGTCGCTCCCCACGTAGTACATTTTGGACAATGGTTGGCCAAGCACGCGTGCATCCACCCGAGGCTATCAAGTATATTCCAAATAAAATATTGGTTTACATTGTTGATTCGTATAAATGA MSDSLVRVSRRVEWGAHRPMPGARRCRSPPEGARYQPRSGRRRLHKRNKGLGLGRRLNPHRSMPQVDRQTGSSPFHIRLGHIVGRHSLPSRQFQALFDSLFNVIFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPPGATGSEHNGALTLSGAPFQGTCARSAAEDASPDYNSDVEAARFSSWALPGSLAVTRGILRVVPPDLGSRRERRPLGDDVQKVGVGVHKEAASKMVHDLYSFEAPIYSRSPRSTFWTMVGQARVHPPEAIKYIPNKILVYIVDSYK
BLAST of Lsi09G009950.1 vs. TrEMBL
Match: A0A0A0KEK9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G239680 PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 8.2e-68 Identity = 130/142 (91.55%), Postives = 134/142 (94.37%), Query Frame = 1
BLAST of Lsi09G009950.1 vs. TrEMBL
Match: A0A072TKH6_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_0021s0160 PE=4 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 3.3e-61 Identity = 143/221 (64.71%), Postives = 155/221 (70.14%), Query Frame = 1
BLAST of Lsi09G009950.1 vs. TrEMBL
Match: C4JBA4_MAIZE (Uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 4.1e-59 Identity = 137/207 (66.18%), Postives = 148/207 (71.50%), Query Frame = 1
BLAST of Lsi09G009950.1 vs. TrEMBL
Match: I1LXS9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 6.5e-57 Identity = 112/132 (84.85%), Postives = 117/132 (88.64%), Query Frame = 1
BLAST of Lsi09G009950.1 vs. TrEMBL
Match: A0A0B2SF05_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_046946 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 6.5e-57 Identity = 112/132 (84.85%), Postives = 117/132 (88.64%), Query Frame = 1
BLAST of Lsi09G009950.1 vs. NCBI nr
Match: gi|700192065|gb|KGN47269.1| (hypothetical protein Csa_6G239680 [Cucumis sativus]) HSP 1 Score: 265.4 bits (677), Expect = 1.2e-67 Identity = 130/142 (91.55%), Postives = 134/142 (94.37%), Query Frame = 1
BLAST of Lsi09G009950.1 vs. NCBI nr
Match: gi|848864188|ref|XP_012832849.1| (PREDICTED: uncharacterized protein LOC105953700 [Erythranthe guttata]) HSP 1 Score: 264.6 bits (675), Expect = 2.0e-67 Identity = 144/213 (67.61%), Postives = 157/213 (73.71%), Query Frame = 1
BLAST of Lsi09G009950.1 vs. NCBI nr
Match: gi|922327861|ref|XP_013443323.1| (hypothetical protein MTR_0021s0160 [Medicago truncatula]) HSP 1 Score: 243.4 bits (620), Expect = 4.8e-61 Identity = 143/221 (64.71%), Postives = 155/221 (70.14%), Query Frame = 1
BLAST of Lsi09G009950.1 vs. NCBI nr
Match: gi|721688719|ref|XP_010239583.1| (PREDICTED: uncharacterized protein LOC104585233 [Brachypodium distachyon]) HSP 1 Score: 241.1 bits (614), Expect = 2.4e-60 Identity = 141/210 (67.14%), Postives = 148/210 (70.48%), Query Frame = 1
BLAST of Lsi09G009950.1 vs. NCBI nr
Match: gi|985567244|ref|NP_001306636.1| (uncharacterized protein LOC103626742 [Zea mays]) HSP 1 Score: 236.5 bits (602), Expect = 5.9e-59 Identity = 137/207 (66.18%), Postives = 148/207 (71.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
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