Lsi09G009950 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi09G009950
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionSenescence-associated protein
Locationchr09 : 13606528 .. 13607646 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAGGAGCGCGCAGATGCCGAAGCCCGCCCGAAGGCGCGCGCTACCAGCCACGATCGGGACGACGACGTCTCCATAAGCGTAACAAAGGCCTGGGCTTAGGCCGCCGTCTCAATCCGCATCGGTCCATGCCCCAAGTCGATCGGCAGACCGGCTCATCACCGTTCCACATCCGACTGGGGCACATCGTCGGCCGCCATTCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAACGTCATTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCCTGGTGCGACAGGGTCCGAGCACAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGATTACAATTCGGACGTCGAGGCCGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTGTAAGTTTCTTTTCCTCCGCTTATTGATATGCTTAAACTCAGCGGGTAGTCCCGCCTGACCTGGGGTCGCGTCGAGAGCGTCGTCCTTTGGGAGACGACGTTCAGAAGGTCGGTGTAGGAGTCCACAAGGAGGCGGCGTCAAAAATGGTTCATGATCTATATAGTTTCGAAGCACCAATATACAGTTGGGTGTTGACGATTATGAGCAACATATAGATGACAACGGTAAAACAACTTCCAATTATTTTGAAGTTTTGAAAAACTTTTCTTAACCAATTTAAAGCAAAAGAAATCCTAATAGATTCAAATATGCCTTGCTAATTAAACTAGAATTGTTACTTTTGATATGTCACATACAGCAATCTCTAAAAAATGGTTCTTTTGATAGGTCGCTCCCCACGTAGTACATTTTGGACAATGGTTGGCCAAGCACGCGTGCATCCACCCGAGGCTATCAAGTATATTCCAAATAAAATATTGGTTTACATTGTTGATTCGTATAAATGA

mRNA sequence

ATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAGGAGCGCGCAGATGCCGAAGCCCGCCCGAAGGCGCGCGCTACCAGCCACGATCGGGACGACGACGTCTCCATAAGCGTAACAAAGGCCTGGGCTTAGGCCGCCGTCTCAATCCGCATCGGTCCATGCCCCAAGTCGATCGGCAGACCGGCTCATCACCGTTCCACATCCGACTGGGGCACATCGTCGGCCGCCATTCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAACGTCATTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCCTGGTGCGACAGGGTCCGAGCACAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGATTACAATTCGGACGTCGAGGCCGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTCGGGTAGTCCCGCCTGACCTGGGGTCGCGTCGAGAGCGTCGTCCTTTGGGAGACGACGTTCAGAAGGTCGGTGTAGGAGTCCACAAGGAGGCGGCGTCAAAAATGGTTCATGATCTATATAGTTTCGAAGCACCAATATACAGTCGCTCCCCACGTAGTACATTTTGGACAATGGTTGGCCAAGCACGCGTGCATCCACCCGAGGCTATCAAGTATATTCCAAATAAAATATTGGTTTACATTGTTGATTCGTATAAATGA

Coding sequence (CDS)

ATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAGGAGCGCGCAGATGCCGAAGCCCGCCCGAAGGCGCGCGCTACCAGCCACGATCGGGACGACGACGTCTCCATAAGCGTAACAAAGGCCTGGGCTTAGGCCGCCGTCTCAATCCGCATCGGTCCATGCCCCAAGTCGATCGGCAGACCGGCTCATCACCGTTCCACATCCGACTGGGGCACATCGTCGGCCGCCATTCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAACGTCATTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCCTGGTGCGACAGGGTCCGAGCACAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGATTACAATTCGGACGTCGAGGCCGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTCGGGTAGTCCCGCCTGACCTGGGGTCGCGTCGAGAGCGTCGTCCTTTGGGAGACGACGTTCAGAAGGTCGGTGTAGGAGTCCACAAGGAGGCGGCGTCAAAAATGGTTCATGATCTATATAGTTTCGAAGCACCAATATACAGTCGCTCCCCACGTAGTACATTTTGGACAATGGTTGGCCAAGCACGCGTGCATCCACCCGAGGCTATCAAGTATATTCCAAATAAAATATTGGTTTACATTGTTGATTCGTATAAATGA

Protein sequence

MSDSLVRVSRRVEWGAHRPMPGARRCRSPPEGARYQPRSGRRRLHKRNKGLGLGRRLNPHRSMPQVDRQTGSSPFHIRLGHIVGRHSLPSRQFQALFDSLFNVIFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPPGATGSEHNGALTLSGAPFQGTCARSAAEDASPDYNSDVEAARFSSWALPGSLAVTRGILRVVPPDLGSRRERRPLGDDVQKVGVGVHKEAASKMVHDLYSFEAPIYSRSPRSTFWTMVGQARVHPPEAIKYIPNKILVYIVDSYK
Homology
[Close]
BLAST of Lsi09G009950 vs. TrEMBL
Match: A0A0A0KEK9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G239680 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 8.2e-68
Identity = 130/142 (91.55%), Postives = 134/142 (94.37%), Query Frame = 1 

Query: 63  MPQVDRQTGSSPFHIRLGHIVGRHSLPSRQFQALFDSLFNVIFIFPSRYLFAIGLSPIFS 122
           MPQVD +TGSSPFHIRLGHI G H LPSRQFQALFDSLF V+FIFPSRYLFAIGLSPIFS
Sbjct: 1   MPQVDWRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS 60

Query: 123 LGQNLPPDWGCIPKQPDSLTAPPGATGSEHNGALTLSGAPFQGTCARSAAEDASPDYNSD 182
           LGQNLPPDWGCIPKQPDSLTAP GATGSE NGALTLSGAPFQGTCARSAAEDASPDYNS+
Sbjct: 61  LGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSAAEDASPDYNSN 120

Query: 183 VEAARFSSWALPGSLAVTRGIL 205
           V+ ARFSSWALPGSLAVTRGIL
Sbjct: 121 VDDARFSSWALPGSLAVTRGIL 142

[Close]
BLAST of Lsi09G009950 vs. TrEMBL
Match: A0A072TKH6_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_0021s0160 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 3.3e-61
Identity = 143/221 (64.71%), Postives = 155/221 (70.14%), Query Frame = 1 

Query: 6   VRVSRRVEWGAHRPMPGARRCRSPPEGARYQPRSGR---RRLHKRNKGLGLGRRLNP--- 65
           VR  R     A   +PG  RC + P G R   R  R   RR  +  +  GL     P   
Sbjct: 68  VRPVRASRSSASLRIPG--RCSAVPRGTRLSARGYRPCRRRQPEAPRAPGLWPPTLPTTV 127

Query: 66  HRSMPQVDRQTGSSPFHIRLGHIVGRHSLPSRQFQALFDSLFNVIFIFPSRYLFAIGLSP 125
           H      D+Q    PF IR G I G H LPSRQFQALFDSLF V+FIFPSRYLFAIGLSP
Sbjct: 128 HTPSRAADQQ---EPFRIRPGRIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSP 187

Query: 126 IFSLGQNLPPDWGCIPKQPDSLTAPPGATGSEHNGALTLSGAPFQGTCARSAAEDASPDY 185
           +FSLG++LPPD GCIPKQPDSLTAP GATGS  +GALTL GAPFQGT ARS AEDASPDY
Sbjct: 188 VFSLGRSLPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASPDY 247

Query: 186 NSDVEAARFSSWALPGSLAVTRGILRVVPPDLGSRRERRPL 221
           NSD  AARFSSWA+PGSLAVTRGILRVVPPDLGSR +RR L
Sbjct: 248 NSDGTAARFSSWAVPGSLAVTRGILRVVPPDLGSRSKRRAL 283

[Close]
BLAST of Lsi09G009950 vs. TrEMBL
Match: C4JBA4_MAIZE (Uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 4.1e-59
Identity = 137/207 (66.18%), Postives = 148/207 (71.50%), Query Frame = 1 

Query: 1   MSDSLVRVSRRVEWGAHRPMPGARRCRSPPEGARYQPRSGRRRLHKRNKGLGL---GRRL 60
           MSDSLVRVSRRV WGA RP+  +   R  PE   Y+PR  RRRL    +  GL    R  
Sbjct: 1   MSDSLVRVSRRVGWGARRPLQRSAP-RGAPEARGYRPR--RRRLPGAPRAPGLWPPARAT 60

Query: 61  NPHRSMPQVDRQTGSSPFHIRLGHIVGRHSLPSRQFQALFDSLFNVIFIFPSRYLFAIGL 120
             H      D+Q    PF IR   +   H LPSRQFQALFDSLF V+FIFPSRYLFAIGL
Sbjct: 61  TVHAPSRSADQQ---EPFRIRPVRVASPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGL 120

Query: 121 SPIFSLGQNLPPDWGCIPKQPDSLTAPPGATGSEHNGALTLSGAPFQGTCARSAAEDASP 180
           SP+FSLG++LPPD GCIPKQPDSLTAP GATGS  +GALTL G PFQ T ARS AEDASP
Sbjct: 121 SPVFSLGRSLPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGVPFQRTWARSVAEDASP 180

Query: 181 DYNSDVEAARFSSWALPGSLAVTRGIL 205
           DYNS  EAARFSSWA PGSLAVTRGIL
Sbjct: 181 DYNSGGEAARFSSWAAPGSLAVTRGIL 201

[Close]
BLAST of Lsi09G009950 vs. TrEMBL
Match: I1LXS9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 6.5e-57
Identity = 112/132 (84.85%), Postives = 117/132 (88.64%), Query Frame = 1 

Query: 73    SPFHIRLGHIVGRHSLPSRQFQALFDSLFNVIFIFPSRYLFAIGLSPIFSLGQNLPPDWG 132
             SPFHIR GHI G H LPSRQFQALFDSLF V+FIFPSRYLFAIGLSP+FSLG+NLPPDWG
Sbjct: 19205 SPFHIRPGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPVFSLGRNLPPDWG 19264

Query: 133   CIPKQPDSLTAPPGATGSEHNGALTLSGAPFQGTCARSAAEDASPDYNSDVEAARFSSWA 192
             CIPKQPDS TAP GATGS H+GALTLSGAPFQGT ARSA EDASPDYNSD E  RFS WA
Sbjct: 19265 CIPKQPDSPTAPRGATGSGHDGALTLSGAPFQGTWARSATEDASPDYNSDAEGDRFSWWA 19324

Query: 193   LPGSLAVTRGIL 205
              PGSLAVT+GIL
Sbjct: 19325 FPGSLAVTKGIL 19336

[Close]
BLAST of Lsi09G009950 vs. TrEMBL
Match: A0A0B2SF05_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_046946 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 6.5e-57
Identity = 112/132 (84.85%), Postives = 117/132 (88.64%), Query Frame = 1 

Query: 73  SPFHIRLGHIVGRHSLPSRQFQALFDSLFNVIFIFPSRYLFAIGLSPIFSLGQNLPPDWG 132
           SPFHIR GHI G H LPSRQFQALFDSLF V+FIFPSRYLFAIGLSP+FSLG+NLPPDWG
Sbjct: 33  SPFHIRPGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPVFSLGRNLPPDWG 92

Query: 133 CIPKQPDSLTAPPGATGSEHNGALTLSGAPFQGTCARSAAEDASPDYNSDVEAARFSSWA 192
           CIPKQPDS TAP GATGS H+GALTLSGAPFQGT ARSA EDASPDYNSD E  RFS WA
Sbjct: 93  CIPKQPDSPTAPRGATGSGHDGALTLSGAPFQGTWARSATEDASPDYNSDAEGDRFSWWA 152

Query: 193 LPGSLAVTRGIL 205
            PGSLAVT+GIL
Sbjct: 153 FPGSLAVTKGIL 164

[Close]
BLAST of Lsi09G009950 vs. NCBI nr
Match: gi|700192065|gb|KGN47269.1| (hypothetical protein Csa_6G239680 [Cucumis sativus])

HSP 1 Score: 265.4 bits (677), Expect = 1.2e-67
Identity = 130/142 (91.55%), Postives = 134/142 (94.37%), Query Frame = 1 

Query: 63  MPQVDRQTGSSPFHIRLGHIVGRHSLPSRQFQALFDSLFNVIFIFPSRYLFAIGLSPIFS 122
           MPQVD +TGSSPFHIRLGHI G H LPSRQFQALFDSLF V+FIFPSRYLFAIGLSPIFS
Sbjct: 1   MPQVDWRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS 60

Query: 123 LGQNLPPDWGCIPKQPDSLTAPPGATGSEHNGALTLSGAPFQGTCARSAAEDASPDYNSD 182
           LGQNLPPDWGCIPKQPDSLTAP GATGSE NGALTLSGAPFQGTCARSAAEDASPDYNS+
Sbjct: 61  LGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSAAEDASPDYNSN 120

Query: 183 VEAARFSSWALPGSLAVTRGIL 205
           V+ ARFSSWALPGSLAVTRGIL
Sbjct: 121 VDDARFSSWALPGSLAVTRGIL 142

[Close]
BLAST of Lsi09G009950 vs. NCBI nr
Match: gi|848864188|ref|XP_012832849.1| (PREDICTED: uncharacterized protein LOC105953700 [Erythranthe guttata])

HSP 1 Score: 264.6 bits (675), Expect = 2.0e-67
Identity = 144/213 (67.61%), Postives = 157/213 (73.71%), Query Frame = 1 

Query: 1   MSDSLVRVSRRVEWGAHRPMPGARRCRSPPEGARYQPRSGRRRLHKRNKGLGLGRRLN-- 60
           MSDSLVRVSRRVEWGA  P PGAR CR  P          R R  + ++G G+ R     
Sbjct: 1   MSDSLVRVSRRVEWGARWPAPGARSCRGTP----------RARAVRHDRGDGIPRAYQLL 60

Query: 61  -----PHRSMPQVDRQTGS--SPFHIRLGHIVGRHSLPSRQFQALFDSLFNVIFIFPSRY 120
                P  ++ +   ++    SPFHIR   I G H LPSRQFQALFDSLF V+FIFPSRY
Sbjct: 61  GLWPPPQSALVRASSRSADRHSPFHIRPRRIAGPHPLPSRQFQALFDSLFKVLFIFPSRY 120

Query: 121 LFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPPGATGSEHNGALTLSGAPFQGTCARSA 180
           LFAIGLSP+FSLG+NLPPDWGCIPKQPDS TAP GATGS HNGALTLSGAPFQGT ARSA
Sbjct: 121 LFAIGLSPVFSLGRNLPPDWGCIPKQPDSPTAPRGATGSGHNGALTLSGAPFQGTWARSA 180

Query: 181 AEDASPDYNSDVEAARFSSWALPGSLAVTRGIL 205
           AEDASPDYNSD  A RFSSWA+PGSLAVTRGIL
Sbjct: 181 AEDASPDYNSDDGAVRFSSWAIPGSLAVTRGIL 203

[Close]
BLAST of Lsi09G009950 vs. NCBI nr
Match: gi|922327861|ref|XP_013443323.1| (hypothetical protein MTR_0021s0160 [Medicago truncatula])

HSP 1 Score: 243.4 bits (620), Expect = 4.8e-61
Identity = 143/221 (64.71%), Postives = 155/221 (70.14%), Query Frame = 1 

Query: 6   VRVSRRVEWGAHRPMPGARRCRSPPEGARYQPRSGR---RRLHKRNKGLGLGRRLNP--- 65
           VR  R     A   +PG  RC + P G R   R  R   RR  +  +  GL     P   
Sbjct: 68  VRPVRASRSSASLRIPG--RCSAVPRGTRLSARGYRPCRRRQPEAPRAPGLWPPTLPTTV 127

Query: 66  HRSMPQVDRQTGSSPFHIRLGHIVGRHSLPSRQFQALFDSLFNVIFIFPSRYLFAIGLSP 125
           H      D+Q    PF IR G I G H LPSRQFQALFDSLF V+FIFPSRYLFAIGLSP
Sbjct: 128 HTPSRAADQQ---EPFRIRPGRIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSP 187

Query: 126 IFSLGQNLPPDWGCIPKQPDSLTAPPGATGSEHNGALTLSGAPFQGTCARSAAEDASPDY 185
           +FSLG++LPPD GCIPKQPDSLTAP GATGS  +GALTL GAPFQGT ARS AEDASPDY
Sbjct: 188 VFSLGRSLPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASPDY 247

Query: 186 NSDVEAARFSSWALPGSLAVTRGILRVVPPDLGSRRERRPL 221
           NSD  AARFSSWA+PGSLAVTRGILRVVPPDLGSR +RR L
Sbjct: 248 NSDGTAARFSSWAVPGSLAVTRGILRVVPPDLGSRSKRRAL 283

[Close]
BLAST of Lsi09G009950 vs. NCBI nr
Match: gi|721688719|ref|XP_010239583.1| (PREDICTED: uncharacterized protein LOC104585233 [Brachypodium distachyon])

HSP 1 Score: 241.1 bits (614), Expect = 2.4e-60
Identity = 141/210 (67.14%), Postives = 148/210 (70.48%), Query Frame = 1 

Query: 1   MSDSLVRVSRRVEWGAHRPMPGARRCRSPPEGARYQPRSGR---RRLHKRNKGLGLGRRL 60
           MSDSLVRVSRRV WGA        RC + P G R   R  R   RR     K  GLG   
Sbjct: 1   MSDSLVRVSRRVGWGARS------RCSAVPRGTRLAARGYRPCQRRPPGAPKDPGLGPPA 60

Query: 61  NP---HRSMPQVDRQTGSSPFHIRLGHIVGRHSLPSRQFQALFDSLFNVIFIFPSRYLFA 120
            P   H      D+Q    PF IR G I G H LPSRQFQALFDSLF V+FIFPSRYLFA
Sbjct: 61  RPTTVHAPSRAADQQ---KPFRIRPGRIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFA 120

Query: 121 IGLSPIFSLGQNLPPDWGCIPKQPDSLTAPPGATGSEHNGALTLSGAPFQGTCARSAAED 180
           IGLSP+FSLG++LPPD GCIPKQPDSLTAP GATGS  +GALTL GAPFQGT ARS AED
Sbjct: 121 IGLSPVFSLGRSLPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAED 180

Query: 181 ASPDYNSDVEAARFSSWALPGSLAVTRGIL 205
           ASPDYNSD  AARFSSWA PGSLAVTRGIL
Sbjct: 181 ASPDYNSDGTAARFSSWAAPGSLAVTRGIL 201

[Close]
BLAST of Lsi09G009950 vs. NCBI nr
Match: gi|985567244|ref|NP_001306636.1| (uncharacterized protein LOC103626742 [Zea mays])

HSP 1 Score: 236.5 bits (602), Expect = 5.9e-59
Identity = 137/207 (66.18%), Postives = 148/207 (71.50%), Query Frame = 1 

Query: 1   MSDSLVRVSRRVEWGAHRPMPGARRCRSPPEGARYQPRSGRRRLHKRNKGLGL---GRRL 60
           MSDSLVRVSRRV WGA RP+  +   R  PE   Y+PR  RRRL    +  GL    R  
Sbjct: 1   MSDSLVRVSRRVGWGARRPLQRSAP-RGAPEARGYRPR--RRRLPGAPRAPGLWPPARAT 60

Query: 61  NPHRSMPQVDRQTGSSPFHIRLGHIVGRHSLPSRQFQALFDSLFNVIFIFPSRYLFAIGL 120
             H      D+Q    PF IR   +   H LPSRQFQALFDSLF V+FIFPSRYLFAIGL
Sbjct: 61  TVHAPSRSADQQ---EPFRIRPVRVASPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGL 120

Query: 121 SPIFSLGQNLPPDWGCIPKQPDSLTAPPGATGSEHNGALTLSGAPFQGTCARSAAEDASP 180
           SP+FSLG++LPPD GCIPKQPDSLTAP GATGS  +GALTL G PFQ T ARS AEDASP
Sbjct: 121 SPVFSLGRSLPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGVPFQRTWARSVAEDASP 180

Query: 181 DYNSDVEAARFSSWALPGSLAVTRGIL 205
           DYNS  EAARFSSWA PGSLAVTRGIL
Sbjct: 181 DYNSGGEAARFSSWAAPGSLAVTRGIL 201

The following BLAST results are available for this feature:
BLAST of Lsi09G009950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi09G009950 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KEK9_CUCSA8.2e-6891.55Uncharacterized protein OS=Cucumis sativus GN=Csa_6G239680 PE=4 SV=1[more]
A0A072TKH6_MEDTR3.3e-6164.71Uncharacterized protein OS=Medicago truncatula GN=MTR_0021s0160 PE=4 SV=1[more]
C4JBA4_MAIZE4.1e-5966.18Uncharacterized protein OS=Zea mays PE=2 SV=1[more]
I1LXS9_SOYBN6.5e-5784.85Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A0B2SF05_GLYSO6.5e-5784.85Uncharacterized protein OS=Glycine soja GN=glysoja_046946 PE=4 SV=1[more]
BLAST of Lsi09G009950 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Lsi09G009950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700192065|gb|KGN47269.1|1.2e-6791.55hypothetical protein Csa_6G239680 [Cucumis sativus][more]
gi|848864188|ref|XP_012832849.1|2.0e-6767.61PREDICTED: uncharacterized protein LOC105953700 [Erythranthe guttata][more]
gi|922327861|ref|XP_013443323.1|4.8e-6164.71hypothetical protein MTR_0021s0160 [Medicago truncatula][more]
gi|721688719|ref|XP_010239583.1|2.4e-6067.14PREDICTED: uncharacterized protein LOC104585233 [Brachypodium distachyon][more]
gi|985567244|ref|NP_001306636.1|5.9e-5966.18uncharacterized protein LOC103626742 [Zea mays][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G009950.1Lsi09G009950.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33047FAMILY NOT NAMEDcoord: 73..215
score: 7.3
NoneNo IPR availablePANTHERPTHR33047:SF4SUBFAMILY NOT NAMEDcoord: 73..215
score: 7.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi09G009950CmoCh15G010600Cucurbita moschata (Rifu)cmolsiB257
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None