Lsi09G009960.1 (mRNA) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGACGTCGTCGTCCCGATCGTGGCTGGTAGCGCGCGCCTTCGGGCGGGCTTCGGCATCTGCGCGCTCCTGGCATCGGCCTGTGGGCTCCCCATTCGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATAGCTCGACGAGATATTTAAATTCGAGCCAAGCATTTGGAATAACTCCGTCCAGAAGGTTCCTGTGAATCTGCCATCTCTGTCACTCACGATACTCGCTGGGACACCCCAGAACTTGACAACATTCTTAAAGAATAGTTGTGTCGTCATTTCGGCTGAGCACATCTTTATTGTTGGGATAAATGTGGCGTATTTCGAGAATCTGTCCACCACTACGAGAAGTGATTCGAAATCCCCGACCTTGGGCAAGTGGGTAATGAAATCGAGGGAGACGCTCTCCCATGGTCGTACTGGGATTGGCAGGGGTTCTAACAGCCCGGCTATCTTCGCTCGCTCAACCTTGTCTTGTTGACAAATAAGGCAGGTCTTGGTAAACTGCATAACATCGTCGCGGAGGTTCGGCCAGTAGTAACCTTGCTTCAACAATGCATAGGTTCTCTGCCAACCCGCATGACCTGCCCACCGAGTGTTGTGGCACTCTTCTAACAACAGCTTCCTCAAGCTCCCTGCTCGGGGTACATACAGACGGTTACCCCTGGTGAATAGGAGGCCTTCCTCTACCCAGAACTGTCTTGTCTTCCCTTCTTTGGCCAGCTGGATTATGGCTTGGGCACCCGGATCATTCTGCAAATGGTCCCTGATGGACTCACGAACTGAGCCTTTTAGTCTACTAGCTTTCAGGTGTGCTAACATGCACAGGGCCGCATGTTCACTCTTTCGGCTAAGGGCGTCGACGGCTTGATTGGTTCGTCCTGATTTATGCTCGAACTGGAAGTCAAATTCGGCAAGACATTCTTGCCAACGAGCTTGTTTCGATGACAACTTAGGTTGGGTGAAGAAGTGGCAGATCGAGCTGTTGTCGGTCTTGACGACAAACGTTGCACCCAACAAGTACTGTCTCCAGGCCCTTAGAAAATGGACCACGACTAACATCTCCTTCTCGGAGGCAGCATACCTCCTTTCGGCCGCATTCAGCTTGCGGCTCTCGTAGGCGATAGGGTGGCCGTCTTGGAGGAGGACGCCCCCTAATGCAAAATTTGACGCATCTGTNTGGCGGCAACGTCAAGGATTCCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGTGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCACTCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGTAAAATGGATCCGTAACCTCGGGAAAAAGATTGGCTCTGAGGGTTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGTTGTCGGTGGACTGCTCAAGCTGTTCCCACGGCGAGAGCGGGTCGCCGCGTGCCGGTCGGGGGACGGACTGGGAACAGCTCCTTCGTGGGCCTTCCCCGGGCGTCGAACAGTCAACTCAGAACTGGTACGGACAAGGGAAATCCGACTGTTTAATTAAAACAAAGCATTGCAATGGTCCCTGCGGATGGTAACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTTNCAATACGAACTTGATAGTATCCTGATCGGAGATCAAGTTTTGAAAAGTACTTGGCCCCATGGAGGCGGTCGAACAAGTCGGTGATTATGGGTAGTGGATATTTGTTCCGAACTGTGAGTTTATTCAAGACCCGGTAATCGATACACATACGGAGGCTTCCATCCTTCTTCTTTTGGAACAGCATAGGGGCTCCATAAGGAGCTTTGACAGGTCTGATAAACCCTGCACTCAACAACTCGTCTAACTGTTTTCGCAGCTCCGCCAACTCTGGCGGGGCCATGCGATACGCGTTCTTTGCAGGGGGTTTTTCCCCAGGCAACAACTCAATCTCGTGGTCTATCTCCCTTCGCGGAGGTAGAGACTTTGGCAAGCTGTCAGGCATAACATCGCCATATTCTCGTAGCACACCTTGGATCTCCTCTGGTATGGTCTCTTTTAGACTTTTGTCCTCAATCATAGGGATGGCCATGAACGTGGGCTCATCACGGACTAGTCCCCTCTTCAGCTGGAGGGCTGATATCATCTTCAACCCATTCGGTTGTTTGATACTAGTAGAGACAACAGTGGGGTTAGACCCCGTGATCGCCAGGCACTTCGCCAGGGGCATGGGGATCACCTTGTGTTCGAGGAGGAACTCTATCCCCAACACAACGTCGAAATCATCCATCTTCACGATCACAAAATCGGTCTAGNTGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATTGGCGGATGTTGCTTTAAGGACTCCGCCAGCACCTTATGAGAAATCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAA ATGGAGACCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGTGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCACTCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGCAAGGGAAGTCGGTAAAATGGATCCGTAACCTCGGGAAAAAGATTGGCTCTGAGGGTTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGTTGTCGGTGGACTGCTCAAGCTGTTCCCACGGCGAGAGCGGGTCGCCGCGTGCCGGTCGGGGGACGGACTGGGAACAGCTCCTTCGTGGGCCTTCCCCGGGCGTCGAACAGTCAACTCAGAACTGGTACGGACAAGGGAAATCCGACTGTTTAATTAAAACAAAGCATTGCAATGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATTGGCGGATGTTGCTTTAAGGACTCCGCCAGCACCTTATGAGAAATCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAA ATGGAGACCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGTGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCACTCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGCAAGGGAAGTCGGTAAAATGGATCCGTAACCTCGGGAAAAAGATTGGCTCTGAGGGTTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGTTGTCGGTGGACTGCTCAAGCTGTTCCCACGGCGAGAGCGGGTCGCCGCGTGCCGGTCGGGGGACGGACTGGGAACAGCTCCTTCGTGGGCCTTCCCCGGGCGTCGAACAGTCAACTCAGAACTGGTACGGACAAGGGAAATCCGACTGTTTAATTAAAACAAAGCATTGCAATGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATTGGCGGATGTTGCTTTAAGGACTCCGCCAGCACCTTATGAGAAATCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAA METLPTLETAQPEVGSSGWKSTARRVVSGAPPAALENPEDRVPLTPGRTHNRIRSPRQGKSVKWIRNLGKKIGSEGWARGSQSRTRRLSVDCSSCSHGESGSPRAGRGTDWEQLLRGPSPGVEQSTQNWYGQGKSDCLIKTKHCNERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGIDGRAPPGVEPAA
BLAST of Lsi09G009960.1 vs. TrEMBL
Match: M1BN50_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402019042 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 1.4e-40 Identity = 80/89 (89.89%), Postives = 84/89 (94.38%), Query Frame = 1
BLAST of Lsi09G009960.1 vs. TrEMBL
Match: A0A0S3TEK1_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.UMG125100 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 5.9e-39 Identity = 79/89 (88.76%), Postives = 83/89 (93.26%), Query Frame = 1
BLAST of Lsi09G009960.1 vs. TrEMBL
Match: A0A0D2Q518_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G276600 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 1.3e-38 Identity = 78/89 (87.64%), Postives = 82/89 (92.13%), Query Frame = 1
BLAST of Lsi09G009960.1 vs. TrEMBL
Match: A0A0D3BAS1_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 1.9e-37 Identity = 82/91 (90.11%), Postives = 83/91 (91.21%), Query Frame = 1
BLAST of Lsi09G009960.1 vs. TrEMBL
Match: C6JSJ8_SORBI (Putative uncharacterized protein Sb1138s002030 OS=Sorghum bicolor GN=Sb1138s002030 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.2e-34 Identity = 73/89 (82.02%), Postives = 78/89 (87.64%), Query Frame = 1
BLAST of Lsi09G009960.1 vs. NCBI nr
Match: gi|658025511|ref|XP_008348155.1| (PREDICTED: lysosomal alpha-mannosidase-like [Malus domestica]) HSP 1 Score: 184.9 bits (468), Expect = 1.5e-43 Identity = 101/155 (65.16%), Postives = 112/155 (72.26%), Query Frame = 1
BLAST of Lsi09G009960.1 vs. NCBI nr
Match: gi|848920510|ref|XP_012857134.1| (PREDICTED: uncharacterized protein LOC105976409 [Erythranthe guttata]) HSP 1 Score: 184.5 bits (467), Expect = 2.0e-43 Identity = 97/138 (70.29%), Postives = 105/138 (76.09%), Query Frame = 1
BLAST of Lsi09G009960.1 vs. NCBI nr
Match: gi|965674227|dbj|BAU03535.1| (hypothetical protein VIGAN_UM125100 [Vigna angularis var. angularis]) HSP 1 Score: 169.1 bits (427), Expect = 8.5e-39 Identity = 79/89 (88.76%), Postives = 83/89 (93.26%), Query Frame = 1
BLAST of Lsi09G009960.1 vs. NCBI nr
Match: gi|763744275|gb|KJB11774.1| (hypothetical protein B456_001G276600 [Gossypium raimondii]) HSP 1 Score: 167.9 bits (424), Expect = 1.9e-38 Identity = 78/89 (87.64%), Postives = 82/89 (92.13%), Query Frame = 1
BLAST of Lsi09G009960.1 vs. NCBI nr
Match: gi|823218732|ref|XP_012442057.1| (PREDICTED: uncharacterized protein LOC105767078 [Gossypium raimondii]) HSP 1 Score: 161.0 bits (406), Expect = 2.3e-36 Identity = 83/105 (79.05%), Postives = 89/105 (84.76%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
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