Lsi09G009960 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi09G009960
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionrRNA intron-encoded homing endonuclease
Locationchr09 : 13607512 .. 13612086 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACGTCGTCGTCCCGATCGTGGCTGGTAGCGCGCGCCTTCGGGCGGGCTTCGGCATCTGCGCGCTCCTGGCATCGGCCTGTGGGCTCCCCATTCGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATAGCTCGACGAGATATTTAAATTCGAGCCAAGCATTTGGAATAACTCCGTCCAGAAGGTTCCTGTGAATCTGCCATCTCTGTCACTCACGATACTCGCTGGGACACCCCAGAACTTGACAACATTCTTAAAGAATAGTTGTGTCGTCATTTCGGCTGAGCACATCTTTATTGTTGGGATAAATGTGGCGTATTTCGAGAATCTGTCCACCACTACGAGAAGTGATTCGAAATCCCCGACCTTGGGCAAGTGGGTAATGAAATCGAGGGAGACGCTCTCCCATGGTCGTACTGGGATTGGCAGGGGTTCTAACAGCCCGGCTATCTTCGCTCGCTCAACCTTGTCTTGTTGACAAATAAGGCAGGTCTTGGTAAACTGCATAACATCGTCGCGGAGGTTCGGCCAGTAGTAACCTTGCTTCAACAATGCATAGGTTCTCTGCCAACCCGCATGACCTGCCCACCGAGTGTTGTGGCACTCTTCTAACAACAGCTTCCTCAAGCTCCCTGCTCGGGGTACATACAGACGGTTACCCCTGGTGAATAGGAGGCCTTCCTCTACCCAGAACTGTCTTGTCTTCCCTTCTTTGGCCAGCTGGATTATGGCTTGGGCACCCGGATCATTCTGCAAATGGTCCCTGATGGACTCACGAACTGAGCCTTTTAGTCTACTAGCTTTCAGGTGTGCTAACATGCACAGGGCCGCATGTTCACTCTTTCGGCTAAGGGCGTCGACGGCTTGATTGGTTCGTCCTGATTTATGCTCGAACTGGAAGTCAAATTCGGCAAGACATTCTTGCCAACGAGCTTGTTTCGATGACAACTTAGGTTGGGTGAAGAAGTGGCAGATCGAGCTGTTGTCGGTCTTGACGACAAACGTTGCACCCAACAAGTACTGTCTCCAGGCCCTTAGAAAATGGACCACGACTAACATCTCCTTCTCGGAGGCAGCATACCTCCTTTCGGCCGCATTCAGCTTGCGGCTCTCGTAGGCGATAGGGTGGCCGTCTTGGAGGAGGACGCCCCCTAATGCAAAATTTGACGCATCTGTNTGGCGGCAACGTCAAGGATTCCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGTGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCACTCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGTAAAATGGATCCGTAACCTCGGGAAAAAGATTGGCTCTGAGGGTTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGTTGTCGGTGGACTGCTCAAGCTGTTCCCACGGCGAGAGCGGGTCGCCGCGTGCCGGTCGGGGGACGGACTGGGAACAGCTCCTTCGTGGGCCTTCCCCGGGCGTCGAACAGTCAACTCAGAACTGGTACGGACAAGGGAAATCCGACTGTTTAATTAAAACAAAGCATTGCAATGGTCCCTGCGGATGGTAACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTTNCAATACGAACTTGATAGTATCCTGATCGGAGATCAAGTTTTGAAAAGTACTTGGCCCCATGGAGGCGGTCGAACAAGTCGGTGATTATGGGTAGTGGATATTTGTTCCGAACTGTGAGTTTATTCAAGACCCGGTAATCGATACACATACGGAGGCTTCCATCCTTCTTCTTTTGGAACAGCATAGGGGCTCCATAAGGAGCTTTGACAGGTCTGATAAACCCTGCACTCAACAACTCGTCTAACTGTTTTCGCAGCTCCGCCAACTCTGGCGGGGCCATGCGATACGCGTTCTTTGCAGGGGGTTTTTCCCCAGGCAACAACTCAATCTCGTGGTCTATCTCCCTTCGCGGAGGTAGAGACTTTGGCAAGCTGTCAGGCATAACATCGCCATATTCTCGTAGCACACCTTGGATCTCCTCTGGTATGGTCTCTTTTAGACTTTTGTCCTCAATCATAGGGATGGCCATGAACGTGGGCTCATCACGGACTAGTCCCCTCTTCAGCTGGAGGGCTGATATCATCTTCAACCCATTCGGTTGTTTGATACTAGTAGAGACAACAGTGGGGTTAGACCCCGTGATCGCCAGGCACTTCGCCAGGGGCATGGGGATCACCTTGTGTTCGAGGAGGAACTCTATCCCCAACACAACGTCGAAATCATCCATCTTCACGATCACAAAATCGGTCTAGNTGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATTGGCGGATGTTGCTTTAAGGACTCCGCCAGCACCTTATGAGAAATCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAA

mRNA sequence

ATGGAGACCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGTGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCACTCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGCAAGGGAAGTCGGTAAAATGGATCCGTAACCTCGGGAAAAAGATTGGCTCTGAGGGTTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGTTGTCGGTGGACTGCTCAAGCTGTTCCCACGGCGAGAGCGGGTCGCCGCGTGCCGGTCGGGGGACGGACTGGGAACAGCTCCTTCGTGGGCCTTCCCCGGGCGTCGAACAGTCAACTCAGAACTGGTACGGACAAGGGAAATCCGACTGTTTAATTAAAACAAAGCATTGCAATGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATTGGCGGATGTTGCTTTAAGGACTCCGCCAGCACCTTATGAGAAATCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAA

Coding sequence (CDS)

ATGGAGACCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGTGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCACTCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGCAAGGGAAGTCGGTAAAATGGATCCGTAACCTCGGGAAAAAGATTGGCTCTGAGGGTTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGTTGTCGGTGGACTGCTCAAGCTGTTCCCACGGCGAGAGCGGGTCGCCGCGTGCCGGTCGGGGGACGGACTGGGAACAGCTCCTTCGTGGGCCTTCCCCGGGCGTCGAACAGTCAACTCAGAACTGGTACGGACAAGGGAAATCCGACTGTTTAATTAAAACAAAGCATTGCAATGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATTGGCGGATGTTGCTTTAAGGACTCCGCCAGCACCTTATGAGAAATCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAA

Protein sequence

METLPTLETAQPEVGSSGWKSTARRVVSGAPPAALENPEDRVPLTPGRTHNRIRSPRQGKSVKWIRNLGKKIGSEGWARGSQSRTRRLSVDCSSCSHGESGSPRAGRGTDWEQLLRGPSPGVEQSTQNWYGQGKSDCLIKTKHCNERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGIDGRAPPGVEPAA
Homology
[Close]
BLAST of Lsi09G009960 vs. TrEMBL
Match: M1BN50_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402019042 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.4e-40
Identity = 80/89 (89.89%), Postives = 84/89 (94.38%), Query Frame = 1 

Query: 57  RQGKSVKWIRNLGKKIGSEGWARGSQSRTRRLSVDCSSCSHGESGSPRAGRGTDWEQLLR 116
           RQGKS KWIRN GK+IGSEGWARGSQSRTRRLSVDCSSCS GESGSPRAGRGTDWE+ LR
Sbjct: 5   RQGKSAKWIRNFGKRIGSEGWARGSQSRTRRLSVDCSSCSRGESGSPRAGRGTDWERFLR 64

Query: 117 GPSPGVEQSTQNWYGQGKSDCLIKTKHCN 146
           GPSPGVEQ TQNWYGQG+SDCLIKTKHC+
Sbjct: 65  GPSPGVEQPTQNWYGQGESDCLIKTKHCD 93

[Close]
BLAST of Lsi09G009960 vs. TrEMBL
Match: A0A0S3TEK1_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.UMG125100 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 5.9e-39
Identity = 79/89 (88.76%), Postives = 83/89 (93.26%), Query Frame = 1 

Query: 57  RQGKSVKWIRNLGKKIGSEGWARGSQSRTRRLSVDCSSCSHGESGSPRAGRGTDWEQLLR 116
           RQGKS KWIRNLGK+IGSEGWARGSQSRTRRLSVDCSSCS GESGS RAGRGTDWE+ LR
Sbjct: 5   RQGKSAKWIRNLGKRIGSEGWARGSQSRTRRLSVDCSSCSRGESGSSRAGRGTDWERALR 64

Query: 117 GPSPGVEQSTQNWYGQGKSDCLIKTKHCN 146
             SPGVEQSTQNWYGQG+SDCLIKTKHC+
Sbjct: 65  ASSPGVEQSTQNWYGQGESDCLIKTKHCD 93

[Close]
BLAST of Lsi09G009960 vs. TrEMBL
Match: A0A0D2Q518_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G276600 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.3e-38
Identity = 78/89 (87.64%), Postives = 82/89 (92.13%), Query Frame = 1 

Query: 57  RQGKSVKWIRNLGKKIGSEGWARGSQSRTRRLSVDCSSCSHGESGSPRAGRGTDWEQLLR 116
           RQGKS KWIRNLGK+IGSEGWARGSQSRTRRL   CSSCS GESGSPRAGRGTDWE+L R
Sbjct: 5   RQGKSAKWIRNLGKRIGSEGWARGSQSRTRRLPAHCSSCSRGESGSPRAGRGTDWERLPR 64

Query: 117 GPSPGVEQSTQNWYGQGKSDCLIKTKHCN 146
           GPSPG EQSTQNWYGQG+SDCLIKTKHC+
Sbjct: 65  GPSPGDEQSTQNWYGQGESDCLIKTKHCD 93

[Close]
BLAST of Lsi09G009960 vs. TrEMBL
Match: A0A0D3BAS1_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.9e-37
Identity = 82/91 (90.11%), Postives = 83/91 (91.21%), Query Frame = 1 

Query: 4   LPTLETAQPEVGSSGWKSTARRVVSGAPPAALENPEDRVPLTPGRTHNRIRSPRQGKSVK 63
           LPTLETAQPEVGSSGWKSTARRVVSGA PAALENPEDRVPLTPGRTHNRIRSPRQGKS K
Sbjct: 528 LPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPRQGKSAK 587

Query: 64  WIRNLGKKIGSEGWARGSQSRTRRLSVDCSS 95
           WIRN GK+IGSEGWARGSQ RTRRL   C S
Sbjct: 588 WIRNFGKRIGSEGWARGSQFRTRRLLAGCLS 618

[Close]
BLAST of Lsi09G009960 vs. TrEMBL
Match: C6JSJ8_SORBI (Putative uncharacterized protein Sb1138s002030 OS=Sorghum bicolor GN=Sb1138s002030 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.2e-34
Identity = 73/89 (82.02%), Postives = 78/89 (87.64%), Query Frame = 1 

Query: 57  RQGKSVKWIRNLGKKIGSEGWARGSQSRTRRLSVDCSSCSHGESGSPRAGRGTDWEQLLR 116
           RQGKS K IRN GK+IGSEGWARGS+ RTRRL  DCSSCS GESG PRAGRGTD E+ LR
Sbjct: 5   RQGKSAKRIRNFGKRIGSEGWARGSRPRTRRLPADCSSCSRGESGPPRAGRGTDRERFLR 64

Query: 117 GPSPGVEQSTQNWYGQGKSDCLIKTKHCN 146
           GPSPGVEQ TQNWYGQG+SDCLIKTKHC+
Sbjct: 65  GPSPGVEQPTQNWYGQGESDCLIKTKHCD 93

[Close]
BLAST of Lsi09G009960 vs. NCBI nr
Match: gi|658025511|ref|XP_008348155.1| (PREDICTED: lysosomal alpha-mannosidase-like [Malus domestica])

HSP 1 Score: 184.9 bits (468), Expect = 1.5e-43
Identity = 101/155 (65.16%), Postives = 112/155 (72.26%), Query Frame = 1 

Query: 7   LETAQPEVGSSGWKSTARRVVSGAPPAALENPEDRVPLTPGRTHNRIRSPRQGKSVKWIR 66
           LETAQPEVGSSGWKSTARR VSGAPPAALENPEDRVP  PGRTHNRIR   QGKS KWIR
Sbjct: 318 LETAQPEVGSSGWKSTARRAVSGAPPAALENPEDRVPFAPGRTHNRIR---QGKSAKWIR 377

Query: 67  NLGKKIGSEGWARGSQSRTRRLSVDCSSCSHGESGSPRAGRGTDWEQLLRGPSPGVEQST 126
           N GK+IGSE  ARGS   TRRLS +CSSCS GESG PRAGRG D E+  RGPSPG E+S 
Sbjct: 378 NFGKRIGSEERARGSXPGTRRLSANCSSCSRGESGPPRAGRGKDRERSPRGPSPGSERSA 437

Query: 127 QNWYGQGKSDCLIKTKHCNERKLGARRRSDTVLVS 162
           QN          +K K  N+ ++      D++ V+
Sbjct: 438 QN------CALNVKVKKFNQARVNGGSNYDSLKVA 463

[Close]
BLAST of Lsi09G009960 vs. NCBI nr
Match: gi|848920510|ref|XP_012857134.1| (PREDICTED: uncharacterized protein LOC105976409 [Erythranthe guttata])

HSP 1 Score: 184.5 bits (467), Expect = 2.0e-43
Identity = 97/138 (70.29%), Postives = 105/138 (76.09%), Query Frame = 1 

Query: 17  SGWKSTARRVVSGAP--PAALENPEDRVPLT-------PGRTHNRIRSPRQGKSVKWIRN 76
           SGWKSTARRVVS  P  P  +   E   P+         G +   +   RQGKS KWIRN
Sbjct: 48  SGWKSTARRVVSVRPRRPLKIRRTECLRPVVLITASGLQGDSLWSMEQCRQGKSAKWIRN 107

Query: 77  LGKKIGSEGWARGSQSRTRRLSVDCSSCSHGESGSPRAGRGTDWEQLLRGPSPGVEQSTQ 136
           LGK+IGSEGWARGSQSRTRRLS +CSSCS GESGS RAGRGTDWE LLRGPSPGVEQSTQ
Sbjct: 108 LGKRIGSEGWARGSQSRTRRLSANCSSCSRGESGSSRAGRGTDWEWLLRGPSPGVEQSTQ 167

Query: 137 NWYGQGKSDCLIKTKHCN 146
           NWYGQG+SDCLIKTKHC+
Sbjct: 168 NWYGQGESDCLIKTKHCD 185

[Close]
BLAST of Lsi09G009960 vs. NCBI nr
Match: gi|965674227|dbj|BAU03535.1| (hypothetical protein VIGAN_UM125100 [Vigna angularis var. angularis])

HSP 1 Score: 169.1 bits (427), Expect = 8.5e-39
Identity = 79/89 (88.76%), Postives = 83/89 (93.26%), Query Frame = 1 

Query: 57  RQGKSVKWIRNLGKKIGSEGWARGSQSRTRRLSVDCSSCSHGESGSPRAGRGTDWEQLLR 116
           RQGKS KWIRNLGK+IGSEGWARGSQSRTRRLSVDCSSCS GESGS RAGRGTDWE+ LR
Sbjct: 5   RQGKSAKWIRNLGKRIGSEGWARGSQSRTRRLSVDCSSCSRGESGSSRAGRGTDWERALR 64

Query: 117 GPSPGVEQSTQNWYGQGKSDCLIKTKHCN 146
             SPGVEQSTQNWYGQG+SDCLIKTKHC+
Sbjct: 65  ASSPGVEQSTQNWYGQGESDCLIKTKHCD 93

[Close]
BLAST of Lsi09G009960 vs. NCBI nr
Match: gi|763744275|gb|KJB11774.1| (hypothetical protein B456_001G276600 [Gossypium raimondii])

HSP 1 Score: 167.9 bits (424), Expect = 1.9e-38
Identity = 78/89 (87.64%), Postives = 82/89 (92.13%), Query Frame = 1 

Query: 57  RQGKSVKWIRNLGKKIGSEGWARGSQSRTRRLSVDCSSCSHGESGSPRAGRGTDWEQLLR 116
           RQGKS KWIRNLGK+IGSEGWARGSQSRTRRL   CSSCS GESGSPRAGRGTDWE+L R
Sbjct: 5   RQGKSAKWIRNLGKRIGSEGWARGSQSRTRRLPAHCSSCSRGESGSPRAGRGTDWERLPR 64

Query: 117 GPSPGVEQSTQNWYGQGKSDCLIKTKHCN 146
           GPSPG EQSTQNWYGQG+SDCLIKTKHC+
Sbjct: 65  GPSPGDEQSTQNWYGQGESDCLIKTKHCD 93

[Close]
BLAST of Lsi09G009960 vs. NCBI nr
Match: gi|823218732|ref|XP_012442057.1| (PREDICTED: uncharacterized protein LOC105767078 [Gossypium raimondii])

HSP 1 Score: 161.0 bits (406), Expect = 2.3e-36
Identity = 83/105 (79.05%), Postives = 89/105 (84.76%), Query Frame = 1 

Query: 12  PEVGSSGWKSTARRVVSGAPPAALENPEDRVPLTPGRTHNRIRSPRQGKSVKWIRNLGKK 71
           PEVGSSG KST RRV+ GAPP AL+N E+RVP  PGRTHNRI   RQGKSVKWIRNLGK+
Sbjct: 126 PEVGSSGRKSTTRRVLFGAPPTALKNLEERVPFAPGRTHNRI---RQGKSVKWIRNLGKR 185

Query: 72  IGSEGWARGSQSRTRRLSVDCSSCSHGESGSPRAGRGTDWEQLLR 117
           IGSEGWARGSQSRTRRL V  SSC+  ESGS RAGRGTDWE+LLR
Sbjct: 186 IGSEGWARGSQSRTRRLPVHYSSCTRSESGSSRAGRGTDWERLLR 227

The following BLAST results are available for this feature:
BLAST of Lsi09G009960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi09G009960 vs. TrEMBL
Match NameE-valueIdentityDescription
M1BN50_SOLTU1.4e-4089.89Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402019042 PE=4 SV=1[more]
A0A0S3TEK1_PHAAN5.9e-3988.76Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.UMG125100 PE=... [more]
A0A0D2Q518_GOSRA1.3e-3887.64Uncharacterized protein OS=Gossypium raimondii GN=B456_001G276600 PE=4 SV=1[more]
A0A0D3BAS1_BRAOL1.9e-3790.11Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1[more]
C6JSJ8_SORBI1.2e-3482.02Putative uncharacterized protein Sb1138s002030 OS=Sorghum bicolor GN=Sb1138s0020... [more]
BLAST of Lsi09G009960 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Lsi09G009960 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|658025511|ref|XP_008348155.1|1.5e-4365.16PREDICTED: lysosomal alpha-mannosidase-like [Malus domestica][more]
gi|848920510|ref|XP_012857134.1|2.0e-4370.29PREDICTED: uncharacterized protein LOC105976409 [Erythranthe guttata][more]
gi|965674227|dbj|BAU03535.1|8.5e-3988.76hypothetical protein VIGAN_UM125100 [Vigna angularis var. angularis][more]
gi|763744275|gb|KJB11774.1|1.9e-3887.64hypothetical protein B456_001G276600 [Gossypium raimondii][more]
gi|823218732|ref|XP_012442057.1|2.3e-3679.05PREDICTED: uncharacterized protein LOC105767078 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
cellular_component GO:0005575 cellular_component
molecular_function GO:0004519 endonuclease activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G009960.1Lsi09G009960.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34410FAMILY NOT NAMEDcoord: 146..215
score: 4.4

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi09G009960Cucurbita moschata (Rifu)cmolsiB257