CmoCh20G006220.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAATAGCTGTTTTAAAAGCAATAAAGTTATGGCGCAAGATGAATCTTGTTTGGCTTTGTCTAATTCGCCTCCTGTGGAGGCTAAGAAAGTAGAGGAGAAACCGGTGGCCGGATCGGCTATGGCGAAGCCGAAGACGGCAGAGGAGAGAAGCGGTGCGGCTGCTGGTAAGAAGGTAGTGAGGTTTAAGCTACAAGAAGAAGACGAAAATTCTGGTGGAAGTGGCGGGGATGGAGACAGAGCCGGAGTATTGAGGATTAAAGTGGTGATGTCTCAGAGAGAGTTGAAGCAGATATTAAAGGAAAACGAGAACAGTTCACGTTCGTTGGAGGAATTGATTGCTGAATTTAAGGTGAAAGGCAGAACGACGGTTTCAGATGCGATAACCGATGAAGTTGAGGATGAAAATGGAAGCAGGAGGCCGGCTTTGGAATGTATTCCTGAAGGTCTCCATTAA ATGGGGAATAGCTGTTTTAAAAGCAATAAAGTTATGGCGCAAGATGAATCTTGTTTGGCTTTGTCTAATTCGCCTCCTGTGGAGGCTAAGAAAGTAGAGGAGAAACCGGTGGCCGGATCGGCTATGGCGAAGCCGAAGACGGCAGAGGAGAGAAGCGGTGCGGCTGCTGGTAAGAAGGTAGTGAGGTTTAAGCTACAAGAAGAAGACGAAAATTCTGGTGGAAGTGGCGGGGATGGAGACAGAGCCGGAGTATTGAGGATTAAAGTGGTGATGTCTCAGAGAGAGTTGAAGCAGATATTAAAGGAAAACGAGAACAGTTCACGTTCGTTGGAGGAATTGATTGCTGAATTTAAGGTGAAAGGCAGAACGACGGTTTCAGATGCGATAACCGATGAAGTTGAGGATGAAAATGGAAGCAGGAGGCCGGCTTTGGAATGTATTCCTGAAGGTCTCCATTAA ATGGGGAATAGCTGTTTTAAAAGCAATAAAGTTATGGCGCAAGATGAATCTTGTTTGGCTTTGTCTAATTCGCCTCCTGTGGAGGCTAAGAAAGTAGAGGAGAAACCGGTGGCCGGATCGGCTATGGCGAAGCCGAAGACGGCAGAGGAGAGAAGCGGTGCGGCTGCTGGTAAGAAGGTAGTGAGGTTTAAGCTACAAGAAGAAGACGAAAATTCTGGTGGAAGTGGCGGGGATGGAGACAGAGCCGGAGTATTGAGGATTAAAGTGGTGATGTCTCAGAGAGAGTTGAAGCAGATATTAAAGGAAAACGAGAACAGTTCACGTTCGTTGGAGGAATTGATTGCTGAATTTAAGGTGAAAGGCAGAACGACGGTTTCAGATGCGATAACCGATGAAGTTGAGGATGAAAATGGAAGCAGGAGGCCGGCTTTGGAATGTATTCCTGAAGGTCTCCATTAA
BLAST of CmoCh20G006220.1 vs. TrEMBL
Match: A0A0A0LQE9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G418890 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 2.6e-33 Identity = 92/153 (60.13%), Postives = 107/153 (69.93%), Query Frame = 1
BLAST of CmoCh20G006220.1 vs. TrEMBL
Match: A0A0D2SHC7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G149800 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.7e-08 Identity = 56/157 (35.67%), Postives = 82/157 (52.23%), Query Frame = 1
BLAST of CmoCh20G006220.1 vs. TrEMBL
Match: M5WRA3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013096mg PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 8.5e-08 Identity = 55/153 (35.95%), Postives = 83/153 (54.25%), Query Frame = 1
BLAST of CmoCh20G006220.1 vs. TrEMBL
Match: A0A0B2SAF1_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_017266 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 9.4e-07 Identity = 47/149 (31.54%), Postives = 83/149 (55.70%), Query Frame = 1
BLAST of CmoCh20G006220.1 vs. TrEMBL
Match: I1KFC9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G305400 PE=4 SV=2) HSP 1 Score: 60.1 bits (144), Expect = 2.7e-06 Identity = 46/149 (30.87%), Postives = 82/149 (55.03%), Query Frame = 1
BLAST of CmoCh20G006220.1 vs. NCBI nr
Match: gi|700208135|gb|KGN63254.1| (hypothetical protein Csa_2G418890 [Cucumis sativus]) HSP 1 Score: 149.8 bits (377), Expect = 3.8e-33 Identity = 92/153 (60.13%), Postives = 107/153 (69.93%), Query Frame = 1
BLAST of CmoCh20G006220.1 vs. NCBI nr
Match: gi|657976106|ref|XP_008379930.1| (PREDICTED: uncharacterized protein LOC103442921 [Malus domestica]) HSP 1 Score: 67.4 bits (163), Expect = 2.5e-08 Identity = 60/160 (37.50%), Postives = 84/160 (52.50%), Query Frame = 1
BLAST of CmoCh20G006220.1 vs. NCBI nr
Match: gi|823157931|ref|XP_012478847.1| (PREDICTED: uncharacterized protein LOC105794288 [Gossypium raimondii]) HSP 1 Score: 67.4 bits (163), Expect = 2.5e-08 Identity = 56/157 (35.67%), Postives = 82/157 (52.23%), Query Frame = 1
BLAST of CmoCh20G006220.1 vs. NCBI nr
Match: gi|694324530|ref|XP_009353278.1| (PREDICTED: uncharacterized protein LOC103944535 [Pyrus x bretschneideri]) HSP 1 Score: 66.2 bits (160), Expect = 5.5e-08 Identity = 59/160 (36.88%), Postives = 84/160 (52.50%), Query Frame = 1
BLAST of CmoCh20G006220.1 vs. NCBI nr
Match: gi|1012036751|ref|XP_015953347.1| (PREDICTED: uncharacterized protein LOC107477795 [Arachis duranensis]) HSP 1 Score: 65.5 bits (158), Expect = 9.4e-08 Identity = 55/161 (34.16%), Postives = 87/161 (54.04%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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