CmoCh19G010280.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGTTCCTCTCGGCCCCGGCAAGTTCTACGGCAGCAGCCTCCCTCGTCCACGCTATTACACCGATATCAAGCTCAACAACGAGCGTATTGATCCACCTACGCCGGTCCTCGATCCGCTTCTCTCATGGGCAAACGAGGCTCATTGGTCTATGGGTGGCCTCAGCTTTAATCGCCTGAGGCTTCAAGGTCGAATCGAAGGTAATGTCCACAAACTTCGAGCCGAGCGCGAGAGGGTTGTTAAGCTGGACTCTGCGCCAAGGAGATCTAACCCTGACGACGAAGCTGCGGGCGATCGCCAATTCAAGAAGTCGAAATCTGTATCTCCACCGCCGGCGCCGATGGCAGCAAAGAGACGGCGATTTATGGCTCTGTTTGACGACGACGATGATGATGTTGGCGTGTACAAGGAAGAGACTGGGGTTGTGAAGAGGAGGTTGGTGAAGAAGCTGGGAGATGATTTTGATCGAGTGGCTGCAGAGAGTAAGGGAGATCAATTAAAGAGGGATAGAAGCTCGGAAATCAATGGGGTTTGTGAATCTGTAATGAAGATCGTTGGAGAGATTAACGATGAAAATACAAGGGGGGAAAAGGTCAACACTGAAAGAAAACGGAAGAGTGGTGGAAAAGTGGAGACTGGTTCCGTTTCTGGGACAAGAACATCTCCCAGATTGGCTAAATTGATTTGA ATGGTGGTTCCTCTCGGCCCCGGCAAGTTCTACGGCAGCAGCCTCCCTCGTCCACGCTATTACACCGATATCAAGCTCAACAACGAGCGTATTGATCCACCTACGCCGGTCCTCGATCCGCTTCTCTCATGGGCAAACGAGGCTCATTGGTCTATGGGTGGCCTCAGCTTTAATCGCCTGAGGCTTCAAGGTCGAATCGAAGGTAATGTCCACAAACTTCGAGCCGAGCGCGAGAGGGTTGTTAAGCTGGACTCTGCGCCAAGGAGATCTAACCCTGACGACGAAGCTGCGGGCGATCGCCAATTCAAGAAGTCGAAATCTGTATCTCCACCGCCGGCGCCGATGGCAGCAAAGAGACGGCGATTTATGGCTCTGTTTGACGACGACGATGATGATGTTGGCGTGTACAAGGAAGAGACTGGGGTTGTGAAGAGGAGGTTGGTGAAGAAGCTGGGAGATGATTTTGATCGAGTGGCTGCAGAGAGTAAGGGAGATCAATTAAAGAGGGATAGAAGCTCGGAAATCAATGGGGTTTGTGAATCTGTAATGAAGATCGTTGGAGAGATTAACGATGAAAATACAAGGGGGGAAAAGGTCAACACTGAAAGAAAACGGAAGAGTGGTGGAAAAGTGGAGACTGGTTCCGTTTCTGGGACAAGAACATCTCCCAGATTGGCTAAATTGATTTGA ATGGTGGTTCCTCTCGGCCCCGGCAAGTTCTACGGCAGCAGCCTCCCTCGTCCACGCTATTACACCGATATCAAGCTCAACAACGAGCGTATTGATCCACCTACGCCGGTCCTCGATCCGCTTCTCTCATGGGCAAACGAGGCTCATTGGTCTATGGGTGGCCTCAGCTTTAATCGCCTGAGGCTTCAAGGTCGAATCGAAGGTAATGTCCACAAACTTCGAGCCGAGCGCGAGAGGGTTGTTAAGCTGGACTCTGCGCCAAGGAGATCTAACCCTGACGACGAAGCTGCGGGCGATCGCCAATTCAAGAAGTCGAAATCTGTATCTCCACCGCCGGCGCCGATGGCAGCAAAGAGACGGCGATTTATGGCTCTGTTTGACGACGACGATGATGATGTTGGCGTGTACAAGGAAGAGACTGGGGTTGTGAAGAGGAGGTTGGTGAAGAAGCTGGGAGATGATTTTGATCGAGTGGCTGCAGAGAGTAAGGGAGATCAATTAAAGAGGGATAGAAGCTCGGAAATCAATGGGGTTTGTGAATCTGTAATGAAGATCGTTGGAGAGATTAACGATGAAAATACAAGGGGGGAAAAGGTCAACACTGAAAGAAAACGGAAGAGTGGTGGAAAAGTGGAGACTGGTTCCGTTTCTGGGACAAGAACATCTCCCAGATTGGCTAAATTGATTTGA
BLAST of CmoCh19G010280.1 vs. TrEMBL
Match: A0A0A0K3S4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048030 PE=4 SV=1) HSP 1 Score: 340.9 bits (873), Expect = 1.2e-90 Identity = 178/235 (75.74%), Postives = 201/235 (85.53%), Query Frame = 1
BLAST of CmoCh19G010280.1 vs. TrEMBL
Match: A0A061EAW7_THECC (Microtubule-associated protein 6, putative OS=Theobroma cacao GN=TCM_008115 PE=4 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 3.0e-57 Identity = 133/239 (55.65%), Postives = 168/239 (70.29%), Query Frame = 1
BLAST of CmoCh19G010280.1 vs. TrEMBL
Match: W9R4I2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004788 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 3.7e-55 Identity = 132/252 (52.38%), Postives = 165/252 (65.48%), Query Frame = 1
BLAST of CmoCh19G010280.1 vs. TrEMBL
Match: B9RVZ1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1174260 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 7.7e-53 Identity = 118/227 (51.98%), Postives = 153/227 (67.40%), Query Frame = 1
BLAST of CmoCh19G010280.1 vs. TrEMBL
Match: A0A0D2SKK6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G201200 PE=4 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 2.2e-52 Identity = 118/238 (49.58%), Postives = 159/238 (66.81%), Query Frame = 1
BLAST of CmoCh19G010280.1 vs. TAIR10
Match: AT4G28310.1 (AT4G28310.1 unknown protein) HSP 1 Score: 173.3 bits (438), Expect = 1.7e-43 Identity = 107/227 (47.14%), Postives = 139/227 (61.23%), Query Frame = 1
BLAST of CmoCh19G010280.1 vs. TAIR10
Match: AT1G52270.1 (AT1G52270.1 unknown protein) HSP 1 Score: 52.0 bits (123), Expect = 5.7e-07 Identity = 21/39 (53.85%), Postives = 28/39 (71.79%), Query Frame = 1
BLAST of CmoCh19G010280.1 vs. NCBI nr
Match: gi|659110606|ref|XP_008455314.1| (PREDICTED: uncharacterized protein LOC103495510 [Cucumis melo]) HSP 1 Score: 341.3 bits (874), Expect = 1.3e-90 Identity = 180/235 (76.60%), Postives = 203/235 (86.38%), Query Frame = 1
BLAST of CmoCh19G010280.1 vs. NCBI nr
Match: gi|449438098|ref|XP_004136827.1| (PREDICTED: uncharacterized protein LOC101207471 [Cucumis sativus]) HSP 1 Score: 340.9 bits (873), Expect = 1.7e-90 Identity = 178/235 (75.74%), Postives = 201/235 (85.53%), Query Frame = 1
BLAST of CmoCh19G010280.1 vs. NCBI nr
Match: gi|590690781|ref|XP_007043602.1| (Microtubule-associated protein 6, putative [Theobroma cacao]) HSP 1 Score: 229.9 bits (585), Expect = 4.3e-57 Identity = 133/239 (55.65%), Postives = 168/239 (70.29%), Query Frame = 1
BLAST of CmoCh19G010280.1 vs. NCBI nr
Match: gi|1009165334|ref|XP_015900977.1| (PREDICTED: uncharacterized protein LOC107434072 [Ziziphus jujuba]) HSP 1 Score: 224.9 bits (572), Expect = 1.4e-55 Identity = 138/255 (54.12%), Postives = 166/255 (65.10%), Query Frame = 1
BLAST of CmoCh19G010280.1 vs. NCBI nr
Match: gi|1009129728|ref|XP_015881923.1| (PREDICTED: uncharacterized protein LOC107417790 [Ziziphus jujuba]) HSP 1 Score: 224.6 bits (571), Expect = 1.8e-55 Identity = 139/255 (54.51%), Postives = 165/255 (64.71%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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