CmoCh15G012460.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh15G012460.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Basic helix-loop-helix DNA-binding superfamily protein, putative
Location	Cmo_Chr15 : 8558787 .. 8559194 (+)
Sequence length	408

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGAAACGGTCAAGTACATTCAATATATTCAGACAAGAATCCAACAACTGTCTGATCAAAGAGATGACCTGAAAAGCCTTTCCGACGAGAATATGGCCATCAGTACGGGGGAAACGCTGAACTCCTCACGGAGGGATTCAGTGGTGGTGAGGTCAAAAAATGGATTAGGAATTCAAGTTGTTTTAGACACAGCCACCCAACATAGGCTCCCAATCTCTAACGTTATTCGAGTTTTAGCCGTTGAAGGGCTTGAAATTCTGAGTTGCGTTACGACCAAAGTAAATGAGAGGTACCTTCATACCATTGAATGCCAAATTGTTGACAATGATGGCTGCTATCCAAGCATCGATGTGTCCGAGCTTCAGCATAAGTTAACCAATTTAGAATATGTTCCTTTAGATTAG

mRNA sequence

ATGCATGAAACGGTCAAGTACATTCAATATATTCAGACAAGAATCCAACAACTGTCTGATCAAAGAGATGACCTGAAAAGCCTTTCCGACGAGAATATGGCCATCAGTACGGGGGAAACGCTGAACTCCTCACGGAGGGATTCAGTGGTGGTGAGGTCAAAAAATGGATTAGGAATTCAAGTTGTTTTAGACACAGCCACCCAACATAGGCTCCCAATCTCTAACGTTATTCGAGTTTTAGCCGTTGAAGGGCTTGAAATTCTGAGTTGCGTTACGACCAAAGTAAATGAGAGGTACCTTCATACCATTGAATGCCAAATTGTTGACAATGATGGCTGCTATCCAAGCATCGATGTGTCCGAGCTTCAGCATAAGTTAACCAATTTAGAATATGTTCCTTTAGATTAG

Coding sequence (CDS)

ATGCATGAAACGGTCAAGTACATTCAATATATTCAGACAAGAATCCAACAACTGTCTGATCAAAGAGATGACCTGAAAAGCCTTTCCGACGAGAATATGGCCATCAGTACGGGGGAAACGCTGAACTCCTCACGGAGGGATTCAGTGGTGGTGAGGTCAAAAAATGGATTAGGAATTCAAGTTGTTTTAGACACAGCCACCCAACATAGGCTCCCAATCTCTAACGTTATTCGAGTTTTAGCCGTTGAAGGGCTTGAAATTCTGAGTTGCGTTACGACCAAAGTAAATGAGAGGTACCTTCATACCATTGAATGCCAAATTGTTGACAATGATGGCTGCTATCCAAGCATCGATGTGTCCGAGCTTCAGCATAAGTTAACCAATTTAGAATATGTTCCTTTAGATTAG

Homology

[Close]

BLAST of CmoCh15G012460.1 vs. Swiss-Prot
Match: BH126_ARATH (Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.9e-08
Identity = 42/128 (32.81%), Postives = 75/128 (58.59%), Query Frame = 1


Query: 5   VKYIQYIQTRIQQLSDQRDDLKSLSDENMAIS-----TGETLNSSRRDSVVVRSK-NGLG 64
           V +I+  + RI++LS +RD+L   + +    +     TG  +  S   +V+V+   +GL 
Sbjct: 88  VNFIKDTEARIKELSARRDELSRETGQGYKSNPDPGKTGSDVGKSEPATVMVQPHVSGLE 147

Query: 65  IQVVLDTATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQIVDNDGCYPSID 124
           + V  +++    LP+S V+  +  +GLE++S  TT+VN+R +HTI+ + V++ GC   ID
Sbjct: 148 VVVSSNSSGPEALPLSKVLETIQEKGLEVMSSFTTRVNDRLMHTIQVE-VNSFGC---ID 207

Query: 125 VSELQHKL 127
           +  LQ KL
Sbjct: 208 LLWLQQKL 211

[Close]

BLAST of CmoCh15G012460.1 vs. Swiss-Prot
Match: BH120_ARATH (Transcription factor bHLH120 OS=Arabidopsis thaliana GN=BHLH120 PE=2 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 4.9e-08
Identity = 44/126 (34.92%), Postives = 72/126 (57.14%), Query Frame = 1


Query: 5   VKYIQYIQTRIQQLSDQRDDLK-SLSDENMAISTGETLNSSRRDSVVVRSKNGL-GIQVV 64
           V +I+  QTRI+ LS +RD+LK  + D      +G    SSR +   V  +  + G +VV
Sbjct: 72  VSFIKDTQTRIKDLSARRDELKREIGDPTSLTGSGSGSGSSRSEPASVMVQPCVSGFEVV 131

Query: 65  LDTATQ--HRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQIVDNDGCYPSIDVS 124
           + +        P+S V+ VL  +GLE++S +T +VNER ++TI+ ++   D C+   D++
Sbjct: 132 VSSLASGLEAWPLSRVLEVLHGQGLEVISSLTARVNERLMYTIQVEVNSFD-CF---DLA 191

Query: 125 ELQHKL 127
            LQ KL
Sbjct: 192 WLQQKL 193

[Close]

BLAST of CmoCh15G012460.1 vs. Swiss-Prot
Match: BH118_ARATH (Transcription factor bHLH118 OS=Arabidopsis thaliana GN=BHLH118 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.4e-07
Identity = 40/123 (32.52%), Postives = 69/123 (56.10%), Query Frame = 1


Query: 5   VKYIQYIQTRIQQLSDQRDDLKSLSDENMAISTGETLNSSRRDSVVVRSKNGLGIQVVLD 64
           V YI Y+Q  I+ ++ +RDDL  LS  +   S  +  N    + VV+R    +GI++VL 
Sbjct: 47  VNYIDYLQRNIKDINSKRDDLVLLSGRSFRSSNEQEWNEIS-NHVVIRPCL-VGIEIVLS 106

Query: 65  TATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQIVDNDGCYPSIDVSELQH 124
                + P S+V++VL   GL +L  + + VN+R +HT++ ++ D       ID+++L+ 
Sbjct: 107 IL---QTPFSSVLQVLREHGLYVLGYICSSVNDRLIHTLQAEVND----LALIDLADLKD 160

Query: 125 KLT 128
            LT
Sbjct: 167 TLT 160

[Close]

BLAST of CmoCh15G012460.1 vs. Swiss-Prot
Match: BH036_ARATH (Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.4e-07
Identity = 42/142 (29.58%), Postives = 82/142 (57.75%), Query Frame = 1


Query: 1   MHETVKYIQYIQTRIQQLSDQRDDLKSLSDENMAISTGETLNSS----RRDSVVVRSKNG 60
           ++E V YI+Y+Q +I++LS +RDDL       M +S G  L SS    + D  ++  KN 
Sbjct: 43  VNEAVNYIKYLQRKIKELSVRRDDL-------MVLSRGSLLGSSNGDFKEDVEMISGKNH 102

Query: 61  -------LGIQVVLDTATQHRLP-ISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQIV 120
                  +G++++L +      P  S+V++VL+  GL +L+ +++ V++R ++TI+ ++ 
Sbjct: 103 VVVRQCLVGVEIMLSSRCCGGQPRFSSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVN 162

Query: 121 DNDGCYPSIDVSELQHKLTNLE 131
           D       ID++EL+ +L  ++
Sbjct: 163 D---MALMIDLAELEKRLIRMK 174

[Close]

BLAST of CmoCh15G012460.1 vs. Swiss-Prot
Match: BH055_ARATH (Transcription factor bHLH55 OS=Arabidopsis thaliana GN=BHLH55 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.7e-06
Identity = 39/138 (28.26%), Postives = 78/138 (56.52%), Query Frame = 1


Query: 3   ETVKYIQYIQTRIQQLSDQRDDLK----------SLSDENMAISTGETLNSSRRDSVVVR 62
           E V YI+ +Q +I+++S++RD +K            S  ++A ST   +  +   +VVVR
Sbjct: 118 EAVNYIKDLQKKIKEVSEKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDTNI-AVVVR 177

Query: 63  SKNGLGIQVVLDTATQHRLPISNVIRVLAVEG-LEILSCVTTKVNERYLHTIECQIVDND 122
               +G+++V+    +H   +S+V+++LA E    I+SC++T++++ ++HTI  ++ +  
Sbjct: 178 PCL-IGLEIVVSCCNRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASEVEEGI 237

Query: 123 GCYPSIDVSELQHKLTNL 130
             Y     SELQ K+  +
Sbjct: 238 EVY----FSELQEKIIKI 249

[Close]

BLAST of CmoCh15G012460.1 vs. TrEMBL
Match: A0A097IYN6_CUCSA (BHLH transcription factor OS=Cucumis sativus GN=Csa5G156220 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.2e-37
Identity = 83/138 (60.14%), Postives = 108/138 (78.26%), Query Frame = 1


Query: 1   MHETVKYIQYIQTRIQQLSDQRDDLKSLSDENMAISTG--ETLNSSRRDSVVVRSKNGLG 60
           M ETV YIQ++Q RIQQL D+R  L+ L+ +      G  ETLNSS R S VVR+K+G+G
Sbjct: 114 MQETVSYIQHMQRRIQQLKDKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGIG 173

Query: 61  IQVVLDTATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQ-IVDNDGCYPSI 120
           IQVVLDTAT+ RLP+S  ++ L  EGLEIL+C++ ++NER++HTIECQ ++++DGCYP+I
Sbjct: 174 IQVVLDTATKQRLPLSIFVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYPTI 233

Query: 121 DVSELQHKLTNLEYVPLD 136
           DVS LQHKL NLEY PLD
Sbjct: 234 DVSVLQHKLANLEYYPLD 251

[Close]

BLAST of CmoCh15G012460.1 vs. TrEMBL
Match: A0A0A0KKN9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157220 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.7e-31
Identity = 77/139 (55.40%), Postives = 105/139 (75.54%), Query Frame = 1


Query: 1   MHETVKYIQYIQTRIQQLSDQRDDLKSL--SDENMAISTGETLNSSRRDSVVVRSKNGLG 60
           MHETVKYI+Y+Q++IQ+L D+RD+LK L  +++N  +   ETL S++RD VVVR+++G G
Sbjct: 122 MHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPGMVETETLQSTKRDKVVVRARDGSG 181

Query: 61  -IQVVLDTATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQ-IVDNDGCYPS 120
            IQV+LDT TQHRL +SN++  L  +G EILSC + K+N+R+LHTIE Q  V  D   P 
Sbjct: 182 GIQVILDTPTQHRLTLSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDTNSPL 241

Query: 121 IDVSELQHKLTNLEYVPLD 136
           ID+S+LQ+ L NLEY PLD
Sbjct: 242 IDISDLQYMLANLEYCPLD 260

[Close]

BLAST of CmoCh15G012460.1 vs. TrEMBL
Match: A0A0A0KMQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157230 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.9e-30
Identity = 74/138 (53.62%), Postives = 106/138 (76.81%), Query Frame = 1


Query: 1   MHETVKYIQYIQTRIQQLSDQRDDLKSL---SDENMAISTGETLNSSRRDSVVVRSKNGL 60
           MHETVKYIQ++QT+IQ L ++RD+LK      +++  I+T ETLNSS+RDSV+V  ++  
Sbjct: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPRSCG 180

Query: 61  GIQVVLDTATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQIVDNDGCYPSI 120
           G+Q++LDTAT HRLP+SN+I+ L  + L+I+SC +T+ N+R+LHTIE +   +     +I
Sbjct: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVD---VETI 240

Query: 121 DVSELQHKLTNLEYVPLD 136
           D+SELQ+KLTNLEY PLD
Sbjct: 241 DMSELQNKLTNLEYFPLD 255

[Close]

BLAST of CmoCh15G012460.1 vs. TrEMBL
Match: A0A097IYP0_CUCSA (BHLH transcription factor OS=Cucumis sativus GN=Csa5G157230 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.2e-30
Identity = 74/138 (53.62%), Postives = 106/138 (76.81%), Query Frame = 1


Query: 1   MHETVKYIQYIQTRIQQLSDQRDDLKSL---SDENMAISTGETLNSSRRDSVVVRSKNGL 60
           MHETVKYIQ++QT+IQ L ++RD+LK      +++  I+T ETLNSS+RDSV+V  ++  
Sbjct: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPRSCG 180

Query: 61  GIQVVLDTATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQIVDNDGCYPSI 120
           G+Q++LDTAT HRLP+SN+I+ L  + L+I+SC +T+ N+R+LHTIE +   +     +I
Sbjct: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVD---VETI 240

Query: 121 DVSELQHKLTNLEYVPLD 136
           D+SELQ+KLTNLEY PLD
Sbjct: 241 DMSELQNKLTNLEYFPLD 255

[Close]

BLAST of CmoCh15G012460.1 vs. TrEMBL
Match: A0A061G572_THECC (Basic helix-loop-helix DNA-binding superfamily protein, putative OS=Theobroma cacao GN=TCM_016134 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.9e-20
Identity = 60/129 (46.51%), Postives = 89/129 (68.99%), Query Frame = 1


Query: 1   MHETVKYIQYIQTRIQQLSDQRDDLKSLSDENMAISTGETLNSSRRDSVVVRSKNGLGIQ 60
           MHE VKYI+++Q RI +LSD+R++LK  S+ +   S  E+      DSVVVR    +G++
Sbjct: 130 MHEAVKYIKHLQNRITELSDKREELKRSSNLHTPSSMPESSPDCSEDSVVVRGCM-VGVE 189

Query: 61  VVLDTATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQIVDNDGCYPSIDVS 120
           + ++T  +  LP+SNV+ V+  EGL +++C++TKVNER LHTI  ++  NDG   SI++S
Sbjct: 190 IAINTGLRPGLPLSNVLDVIVAEGLSVVNCISTKVNERLLHTIVLEV--NDG--RSIELS 249

Query: 121 ELQHKLTNL 130
           ELQ KLT L
Sbjct: 250 ELQQKLTKL 253

[Close]

BLAST of CmoCh15G012460.1 vs. TAIR10
Match: AT4G25410.1 (AT4G25410.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 59.7 bits (143), Expect = 1.6e-09
Identity = 42/128 (32.81%), Postives = 75/128 (58.59%), Query Frame = 1


Query: 5   VKYIQYIQTRIQQLSDQRDDLKSLSDENMAIS-----TGETLNSSRRDSVVVRSK-NGLG 64
           V +I+  + RI++LS +RD+L   + +    +     TG  +  S   +V+V+   +GL 
Sbjct: 88  VNFIKDTEARIKELSARRDELSRETGQGYKSNPDPGKTGSDVGKSEPATVMVQPHVSGLE 147

Query: 65  IQVVLDTATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQIVDNDGCYPSID 124
           + V  +++    LP+S V+  +  +GLE++S  TT+VN+R +HTI+ + V++ GC   ID
Sbjct: 148 VVVSSNSSGPEALPLSKVLETIQEKGLEVMSSFTTRVNDRLMHTIQVE-VNSFGC---ID 207

Query: 125 VSELQHKL 127
           +  LQ KL
Sbjct: 208 LLWLQQKL 211

[Close]

BLAST of CmoCh15G012460.1 vs. TAIR10
Match: AT5G51790.1 (AT5G51790.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 58.9 bits (141), Expect = 2.7e-09
Identity = 44/126 (34.92%), Postives = 72/126 (57.14%), Query Frame = 1


Query: 5   VKYIQYIQTRIQQLSDQRDDLK-SLSDENMAISTGETLNSSRRDSVVVRSKNGL-GIQVV 64
           V +I+  QTRI+ LS +RD+LK  + D      +G    SSR +   V  +  + G +VV
Sbjct: 72  VSFIKDTQTRIKDLSARRDELKREIGDPTSLTGSGSGSGSSRSEPASVMVQPCVSGFEVV 131

Query: 65  LDTATQ--HRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQIVDNDGCYPSIDVS 124
           + +        P+S V+ VL  +GLE++S +T +VNER ++TI+ ++   D C+   D++
Sbjct: 132 VSSLASGLEAWPLSRVLEVLHGQGLEVISSLTARVNERLMYTIQVEVNSFD-CF---DLA 191

Query: 125 ELQHKL 127
            LQ KL
Sbjct: 192 WLQQKL 193

[Close]

BLAST of CmoCh15G012460.1 vs. TAIR10
Match: AT4G25400.1 (AT4G25400.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 56.6 bits (135), Expect = 1.4e-08
Identity = 40/123 (32.52%), Postives = 69/123 (56.10%), Query Frame = 1


Query: 5   VKYIQYIQTRIQQLSDQRDDLKSLSDENMAISTGETLNSSRRDSVVVRSKNGLGIQVVLD 64
           V YI Y+Q  I+ ++ +RDDL  LS  +   S  +  N    + VV+R    +GI++VL 
Sbjct: 47  VNYIDYLQRNIKDINSKRDDLVLLSGRSFRSSNEQEWNEIS-NHVVIRPCL-VGIEIVLS 106

Query: 65  TATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQIVDNDGCYPSIDVSELQH 124
                + P S+V++VL   GL +L  + + VN+R +HT++ ++ D       ID+++L+ 
Sbjct: 107 IL---QTPFSSVLQVLREHGLYVLGYICSSVNDRLIHTLQAEVND----LALIDLADLKD 160

Query: 125 KLT 128
            LT
Sbjct: 167 TLT 160

[Close]

BLAST of CmoCh15G012460.1 vs. TAIR10
Match: AT5G51780.1 (AT5G51780.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 56.6 bits (135), Expect = 1.4e-08
Identity = 42/142 (29.58%), Postives = 82/142 (57.75%), Query Frame = 1


Query: 1   MHETVKYIQYIQTRIQQLSDQRDDLKSLSDENMAISTGETLNSS----RRDSVVVRSKNG 60
           ++E V YI+Y+Q +I++LS +RDDL       M +S G  L SS    + D  ++  KN 
Sbjct: 43  VNEAVNYIKYLQRKIKELSVRRDDL-------MVLSRGSLLGSSNGDFKEDVEMISGKNH 102

Query: 61  -------LGIQVVLDTATQHRLP-ISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQIV 120
                  +G++++L +      P  S+V++VL+  GL +L+ +++ V++R ++TI+ ++ 
Sbjct: 103 VVVRQCLVGVEIMLSSRCCGGQPRFSSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVN 162

Query: 121 DNDGCYPSIDVSELQHKLTNLE 131
           D       ID++EL+ +L  ++
Sbjct: 163 D---MALMIDLAELEKRLIRMK 174

[Close]

BLAST of CmoCh15G012460.1 vs. TAIR10
Match: AT1G12540.1 (AT1G12540.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 53.1 bits (126), Expect = 1.5e-07
Identity = 39/138 (28.26%), Postives = 78/138 (56.52%), Query Frame = 1


Query: 3   ETVKYIQYIQTRIQQLSDQRDDLK----------SLSDENMAISTGETLNSSRRDSVVVR 62
           E V YI+ +Q +I+++S++RD +K            S  ++A ST   +  +   +VVVR
Sbjct: 118 EAVNYIKDLQKKIKEVSEKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDTNI-AVVVR 177

Query: 63  SKNGLGIQVVLDTATQHRLPISNVIRVLAVEG-LEILSCVTTKVNERYLHTIECQIVDND 122
               +G+++V+    +H   +S+V+++LA E    I+SC++T++++ ++HTI  ++ +  
Sbjct: 178 PCL-IGLEIVVSCCNRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASEVEEGI 237

Query: 123 GCYPSIDVSELQHKLTNL 130
             Y     SELQ K+  +
Sbjct: 238 EVY----FSELQEKIIKI 249

[Close]

BLAST of CmoCh15G012460.1 vs. NCBI nr
Match: gi|659073660|ref|XP_008437183.1| (PREDICTED: transcription factor bHLH118-like isoform X2 [Cucumis melo])

HSP 1 Score: 178.3 bits (451), Expect = 8.8e-42
Identity = 89/137 (64.96%), Postives = 113/137 (82.48%), Query Frame = 1


Query: 1   MHETVKYIQYIQTRIQQLSDQRDDLKSLSDENMAI-STGETLNSSRRDSVVVRSKNGLGI 60
           M ETV YIQ++Q RIQQL D+RD L+ L+++ M I  T ETLNSS RDSVVVR+K+G+GI
Sbjct: 122 MQETVSYIQHMQRRIQQLKDKRDKLRELANQTMVIIGTTETLNSSERDSVVVRAKDGIGI 181

Query: 61  QVVLDTATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQ-IVDNDGCYPSID 120
           QVVLDTAT+HRLP+S  ++ L  EGLEIL+C++ ++NER++HTIECQ I+ +DGCYP+ID
Sbjct: 182 QVVLDTATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCYPTID 241

Query: 121 VSELQHKLTNLEYVPLD 136
            S LQHKL NLEY PLD
Sbjct: 242 ASMLQHKLANLEYYPLD 258

[Close]

BLAST of CmoCh15G012460.1 vs. NCBI nr
Match: gi|821595469|ref|NP_001295816.1| (transcription factor bHLH118-like [Cucumis sativus])

HSP 1 Score: 164.1 bits (414), Expect = 1.7e-37
Identity = 83/138 (60.14%), Postives = 108/138 (78.26%), Query Frame = 1


Query: 1   MHETVKYIQYIQTRIQQLSDQRDDLKSLSDENMAISTG--ETLNSSRRDSVVVRSKNGLG 60
           M ETV YIQ++Q RIQQL D+R  L+ L+ +      G  ETLNSS R S VVR+K+G+G
Sbjct: 114 MQETVSYIQHMQRRIQQLKDKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGIG 173

Query: 61  IQVVLDTATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQ-IVDNDGCYPSI 120
           IQVVLDTAT+ RLP+S  ++ L  EGLEIL+C++ ++NER++HTIECQ ++++DGCYP+I
Sbjct: 174 IQVVLDTATKQRLPLSIFVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYPTI 233

Query: 121 DVSELQHKLTNLEYVPLD 136
           DVS LQHKL NLEY PLD
Sbjct: 234 DVSVLQHKLANLEYYPLD 251

[Close]

BLAST of CmoCh15G012460.1 vs. NCBI nr
Match: gi|659073666|ref|XP_008437186.1| (PREDICTED: transcription factor bHLH118-like [Cucumis melo])

HSP 1 Score: 162.2 bits (409), Expect = 6.5e-37
Identity = 81/136 (59.56%), Postives = 109/136 (80.15%), Query Frame = 1


Query: 1   MHETVKYIQYIQTRIQQLSDQRDDLKSLSDENMAISTGETLNSSRRDSVVVRSKNGLGIQ 60
           M +TV Y+Q+IQ RIQQL D+RD L+ L+++    +  + L+SS RDSVVVR+K+G+GIQ
Sbjct: 1   MQQTVSYVQHIQRRIQQLKDKRDKLRELANQ----TNRKRLSSSERDSVVVRAKDGIGIQ 60

Query: 61  VVLDTATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQ-IVDNDGCYPSIDV 120
           VVLDT T+HRLP S  ++ L VEGLEIL+C++ +++ER++HTIECQ I++NDGCY +IDV
Sbjct: 61  VVLDTTTKHRLPFSIFVQALVVEGLEILNCISHRLDERFIHTIECQPILNNDGCYTTIDV 120

Query: 121 SELQHKLTNLEYVPLD 136
           S  QHKL NLEY PLD
Sbjct: 121 SMFQHKLANLEYYPLD 132

[Close]

BLAST of CmoCh15G012460.1 vs. NCBI nr
Match: gi|659073658|ref|XP_008437182.1| (PREDICTED: transcription factor bHLH36-like isoform X1 [Cucumis melo])

HSP 1 Score: 149.4 bits (376), Expect = 4.4e-33
Identity = 80/138 (57.97%), Postives = 107/138 (77.54%), Query Frame = 1


Query: 1   MHETVKYIQYIQTRIQQLSDQRDDLKSL--SDENMAISTGETLNSSRRDSVVVRSKNGL- 60
           MHETVKYI+Y+Q++IQ+L D+RD+LK L  +++N  +   ETL S++RD VVVR+++G  
Sbjct: 122 MHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPDMVETETLKSTKRDKVVVRARDGSG 181

Query: 61  GIQVVLDTATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQIVDNDGCYPSI 120
           GIQV+LDTAT+HRLP+SN++  L  +GLEILSC + K+N+R+LHTIE Q V      P I
Sbjct: 182 GIQVILDTATRHRLPLSNILVALTDQGLEILSCSSNKLNDRFLHTIESQPVFTSTNSPII 241

Query: 121 DVSELQHKLTNLEYVPLD 136
           DVS LQ+ LTNLEY PLD
Sbjct: 242 DVSGLQYTLTNLEYCPLD 259

[Close]

BLAST of CmoCh15G012460.1 vs. NCBI nr
Match: gi|449459720|ref|XP_004147594.1| (PREDICTED: transcription factor bHLH36-like [Cucumis sativus])

HSP 1 Score: 143.7 bits (361), Expect = 2.4e-31
Identity = 77/139 (55.40%), Postives = 105/139 (75.54%), Query Frame = 1


Query: 1   MHETVKYIQYIQTRIQQLSDQRDDLKSL--SDENMAISTGETLNSSRRDSVVVRSKNGLG 60
           MHETVKYI+Y+Q++IQ+L D+RD+LK L  +++N  +   ETL S++RD VVVR+++G G
Sbjct: 122 MHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPGMVETETLQSTKRDKVVVRARDGSG 181

Query: 61  -IQVVLDTATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQ-IVDNDGCYPS 120
            IQV+LDT TQHRL +SN++  L  +G EILSC + K+N+R+LHTIE Q  V  D   P 
Sbjct: 182 GIQVILDTPTQHRLTLSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDTNSPL 241

Query: 121 IDVSELQHKLTNLEYVPLD 136
           ID+S+LQ+ L NLEY PLD
Sbjct: 242 IDISDLQYMLANLEYCPLD 260

The following BLAST results are available for this feature:

BLAST of CmoCh15G012460.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BH126_ARATH	2.9e-08	32.81	Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126 PE=2 SV=1	[more]
BH120_ARATH	4.9e-08	34.92	Transcription factor bHLH120 OS=Arabidopsis thaliana GN=BHLH120 PE=2 SV=2	[more]
BH118_ARATH	2.4e-07	32.52	Transcription factor bHLH118 OS=Arabidopsis thaliana GN=BHLH118 PE=2 SV=1	[more]
BH036_ARATH	2.4e-07	29.58	Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2 SV=1	[more]
BH055_ARATH	2.7e-06	28.26	Transcription factor bHLH55 OS=Arabidopsis thaliana GN=BHLH55 PE=2 SV=1	[more]

BLAST of CmoCh15G012460.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A097IYN6_CUCSA	1.2e-37	60.14	BHLH transcription factor OS=Cucumis sativus GN=Csa5G156220 PE=2 SV=1	[more]
A0A0A0KKN9_CUCSA	1.7e-31	55.40	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157220 PE=4 SV=1	[more]
A0A0A0KMQ4_CUCSA	1.9e-30	53.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157230 PE=4 SV=1	[more]
A0A097IYP0_CUCSA	3.2e-30	53.62	BHLH transcription factor OS=Cucumis sativus GN=Csa5G157230 PE=2 SV=1	[more]
A0A061G572_THECC	3.9e-20	46.51	Basic helix-loop-helix DNA-binding superfamily protein, putative OS=Theobroma ca...	[more]

BLAST of CmoCh15G012460.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G25410.1	1.6e-09	32.81	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G51790.1	2.7e-09	34.92	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G25400.1	1.4e-08	32.52	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G51780.1	1.4e-08	29.58	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G12540.1	1.5e-07	28.26	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of CmoCh15G012460.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659073660\|ref\|XP_008437183.1\|	8.8e-42	64.96	PREDICTED: transcription factor bHLH118-like isoform X2 [Cucumis melo]	[more]
gi\|821595469\|ref\|NP_001295816.1\|	1.7e-37	60.14	transcription factor bHLH118-like [Cucumis sativus]	[more]
gi\|659073666\|ref\|XP_008437186.1\|	6.5e-37	59.56	PREDICTED: transcription factor bHLH118-like [Cucumis melo]	[more]
gi\|659073658\|ref\|XP_008437182.1\|	4.4e-33	57.97	PREDICTED: transcription factor bHLH36-like isoform X1 [Cucumis melo]	[more]
gi\|449459720\|ref\|XP_004147594.1\|	2.4e-31	55.40	PREDICTED: transcription factor bHLH36-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR015660	MASH1/Ascl1a-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh15G012460	CmoCh15G012460	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh15G012460.1	CmoCh15G012460.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh15G012460.1.exon.1	CmoCh15G012460.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh15G012460.1.CDS.1	CmoCh15G012460.1.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 1..128 score: 9.8
None	No IPR available	PANTHER	PTHR13935:SF54	TRANSCRIPTION FACTOR BHLH118-RELATED	coord: 1..128 score: 9.8