CmoCh15G012460 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh15G012460
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionBasic helix-loop-helix DNA-binding superfamily protein, putative
LocationCmo_Chr15 : 8558787 .. 8559194 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGAAACGGTCAAGTACATTCAATATATTCAGACAAGAATCCAACAACTGTCTGATCAAAGAGATGACCTGAAAAGCCTTTCCGACGAGAATATGGCCATCAGTACGGGGGAAACGCTGAACTCCTCACGGAGGGATTCAGTGGTGGTGAGGTCAAAAAATGGATTAGGAATTCAAGTTGTTTTAGACACAGCCACCCAACATAGGCTCCCAATCTCTAACGTTATTCGAGTTTTAGCCGTTGAAGGGCTTGAAATTCTGAGTTGCGTTACGACCAAAGTAAATGAGAGGTACCTTCATACCATTGAATGCCAAATTGTTGACAATGATGGCTGCTATCCAAGCATCGATGTGTCCGAGCTTCAGCATAAGTTAACCAATTTAGAATATGTTCCTTTAGATTAG

mRNA sequence

ATGCATGAAACGGTCAAGTACATTCAATATATTCAGACAAGAATCCAACAACTGTCTGATCAAAGAGATGACCTGAAAAGCCTTTCCGACGAGAATATGGCCATCAGTACGGGGGAAACGCTGAACTCCTCACGGAGGGATTCAGTGGTGGTGAGGTCAAAAAATGGATTAGGAATTCAAGTTGTTTTAGACACAGCCACCCAACATAGGCTCCCAATCTCTAACGTTATTCGAGTTTTAGCCGTTGAAGGGCTTGAAATTCTGAGTTGCGTTACGACCAAAGTAAATGAGAGGTACCTTCATACCATTGAATGCCAAATTGTTGACAATGATGGCTGCTATCCAAGCATCGATGTGTCCGAGCTTCAGCATAAGTTAACCAATTTAGAATATGTTCCTTTAGATTAG

Coding sequence (CDS)

ATGCATGAAACGGTCAAGTACATTCAATATATTCAGACAAGAATCCAACAACTGTCTGATCAAAGAGATGACCTGAAAAGCCTTTCCGACGAGAATATGGCCATCAGTACGGGGGAAACGCTGAACTCCTCACGGAGGGATTCAGTGGTGGTGAGGTCAAAAAATGGATTAGGAATTCAAGTTGTTTTAGACACAGCCACCCAACATAGGCTCCCAATCTCTAACGTTATTCGAGTTTTAGCCGTTGAAGGGCTTGAAATTCTGAGTTGCGTTACGACCAAAGTAAATGAGAGGTACCTTCATACCATTGAATGCCAAATTGTTGACAATGATGGCTGCTATCCAAGCATCGATGTGTCCGAGCTTCAGCATAAGTTAACCAATTTAGAATATGTTCCTTTAGATTAG
Homology
[Close]
BLAST of CmoCh15G012460 vs. Swiss-Prot
Match: BH126_ARATH (Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.9e-08
Identity = 42/128 (32.81%), Postives = 75/128 (58.59%), Query Frame = 1 

Query: 5   VKYIQYIQTRIQQLSDQRDDLKSLSDENMAIS-----TGETLNSSRRDSVVVRSK-NGLG 64
           V +I+  + RI++LS +RD+L   + +    +     TG  +  S   +V+V+   +GL 
Sbjct: 88  VNFIKDTEARIKELSARRDELSRETGQGYKSNPDPGKTGSDVGKSEPATVMVQPHVSGLE 147

Query: 65  IQVVLDTATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQIVDNDGCYPSID 124
           + V  +++    LP+S V+  +  +GLE++S  TT+VN+R +HTI+ + V++ GC   ID
Sbjct: 148 VVVSSNSSGPEALPLSKVLETIQEKGLEVMSSFTTRVNDRLMHTIQVE-VNSFGC---ID 207

Query: 125 VSELQHKL 127
           +  LQ KL
Sbjct: 208 LLWLQQKL 211

[Close]
BLAST of CmoCh15G012460 vs. Swiss-Prot
Match: BH120_ARATH (Transcription factor bHLH120 OS=Arabidopsis thaliana GN=BHLH120 PE=2 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 4.9e-08
Identity = 44/126 (34.92%), Postives = 72/126 (57.14%), Query Frame = 1 

Query: 5   VKYIQYIQTRIQQLSDQRDDLK-SLSDENMAISTGETLNSSRRDSVVVRSKNGL-GIQVV 64
           V +I+  QTRI+ LS +RD+LK  + D      +G    SSR +   V  +  + G +VV
Sbjct: 72  VSFIKDTQTRIKDLSARRDELKREIGDPTSLTGSGSGSGSSRSEPASVMVQPCVSGFEVV 131

Query: 65  LDTATQ--HRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQIVDNDGCYPSIDVS 124
           + +        P+S V+ VL  +GLE++S +T +VNER ++TI+ ++   D C+   D++
Sbjct: 132 VSSLASGLEAWPLSRVLEVLHGQGLEVISSLTARVNERLMYTIQVEVNSFD-CF---DLA 191

Query: 125 ELQHKL 127
            LQ KL
Sbjct: 192 WLQQKL 193

[Close]
BLAST of CmoCh15G012460 vs. Swiss-Prot
Match: BH118_ARATH (Transcription factor bHLH118 OS=Arabidopsis thaliana GN=BHLH118 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.4e-07
Identity = 40/123 (32.52%), Postives = 69/123 (56.10%), Query Frame = 1 

Query: 5   VKYIQYIQTRIQQLSDQRDDLKSLSDENMAISTGETLNSSRRDSVVVRSKNGLGIQVVLD 64
           V YI Y+Q  I+ ++ +RDDL  LS  +   S  +  N    + VV+R    +GI++VL 
Sbjct: 47  VNYIDYLQRNIKDINSKRDDLVLLSGRSFRSSNEQEWNEIS-NHVVIRPCL-VGIEIVLS 106

Query: 65  TATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQIVDNDGCYPSIDVSELQH 124
                + P S+V++VL   GL +L  + + VN+R +HT++ ++ D       ID+++L+ 
Sbjct: 107 IL---QTPFSSVLQVLREHGLYVLGYICSSVNDRLIHTLQAEVND----LALIDLADLKD 160

Query: 125 KLT 128
            LT
Sbjct: 167 TLT 160

[Close]
BLAST of CmoCh15G012460 vs. Swiss-Prot
Match: BH036_ARATH (Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.4e-07
Identity = 42/142 (29.58%), Postives = 82/142 (57.75%), Query Frame = 1 

Query: 1   MHETVKYIQYIQTRIQQLSDQRDDLKSLSDENMAISTGETLNSS----RRDSVVVRSKNG 60
           ++E V YI+Y+Q +I++LS +RDDL       M +S G  L SS    + D  ++  KN 
Sbjct: 43  VNEAVNYIKYLQRKIKELSVRRDDL-------MVLSRGSLLGSSNGDFKEDVEMISGKNH 102

Query: 61  -------LGIQVVLDTATQHRLP-ISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQIV 120
                  +G++++L +      P  S+V++VL+  GL +L+ +++ V++R ++TI+ ++ 
Sbjct: 103 VVVRQCLVGVEIMLSSRCCGGQPRFSSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVN 162

Query: 121 DNDGCYPSIDVSELQHKLTNLE 131
           D       ID++EL+ +L  ++
Sbjct: 163 D---MALMIDLAELEKRLIRMK 174

[Close]
BLAST of CmoCh15G012460 vs. Swiss-Prot
Match: BH055_ARATH (Transcription factor bHLH55 OS=Arabidopsis thaliana GN=BHLH55 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.7e-06
Identity = 39/138 (28.26%), Postives = 78/138 (56.52%), Query Frame = 1 

Query: 3   ETVKYIQYIQTRIQQLSDQRDDLK----------SLSDENMAISTGETLNSSRRDSVVVR 62
           E V YI+ +Q +I+++S++RD +K            S  ++A ST   +  +   +VVVR
Sbjct: 118 EAVNYIKDLQKKIKEVSEKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDTNI-AVVVR 177

Query: 63  SKNGLGIQVVLDTATQHRLPISNVIRVLAVEG-LEILSCVTTKVNERYLHTIECQIVDND 122
               +G+++V+    +H   +S+V+++LA E    I+SC++T++++ ++HTI  ++ +  
Sbjct: 178 PCL-IGLEIVVSCCNRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASEVEEGI 237

Query: 123 GCYPSIDVSELQHKLTNL 130
             Y     SELQ K+  +
Sbjct: 238 EVY----FSELQEKIIKI 249

[Close]
BLAST of CmoCh15G012460 vs. TrEMBL
Match: A0A097IYN6_CUCSA (BHLH transcription factor OS=Cucumis sativus GN=Csa5G156220 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.2e-37
Identity = 83/138 (60.14%), Postives = 108/138 (78.26%), Query Frame = 1 

Query: 1   MHETVKYIQYIQTRIQQLSDQRDDLKSLSDENMAISTG--ETLNSSRRDSVVVRSKNGLG 60
           M ETV YIQ++Q RIQQL D+R  L+ L+ +      G  ETLNSS R S VVR+K+G+G
Sbjct: 114 MQETVSYIQHMQRRIQQLKDKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGIG 173

Query: 61  IQVVLDTATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQ-IVDNDGCYPSI 120
           IQVVLDTAT+ RLP+S  ++ L  EGLEIL+C++ ++NER++HTIECQ ++++DGCYP+I
Sbjct: 174 IQVVLDTATKQRLPLSIFVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYPTI 233

Query: 121 DVSELQHKLTNLEYVPLD 136
           DVS LQHKL NLEY PLD
Sbjct: 234 DVSVLQHKLANLEYYPLD 251

[Close]
BLAST of CmoCh15G012460 vs. TrEMBL
Match: A0A0A0KKN9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157220 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.7e-31
Identity = 77/139 (55.40%), Postives = 105/139 (75.54%), Query Frame = 1 

Query: 1   MHETVKYIQYIQTRIQQLSDQRDDLKSL--SDENMAISTGETLNSSRRDSVVVRSKNGLG 60
           MHETVKYI+Y+Q++IQ+L D+RD+LK L  +++N  +   ETL S++RD VVVR+++G G
Sbjct: 122 MHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPGMVETETLQSTKRDKVVVRARDGSG 181

Query: 61  -IQVVLDTATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQ-IVDNDGCYPS 120
            IQV+LDT TQHRL +SN++  L  +G EILSC + K+N+R+LHTIE Q  V  D   P 
Sbjct: 182 GIQVILDTPTQHRLTLSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDTNSPL 241

Query: 121 IDVSELQHKLTNLEYVPLD 136
           ID+S+LQ+ L NLEY PLD
Sbjct: 242 IDISDLQYMLANLEYCPLD 260

[Close]
BLAST of CmoCh15G012460 vs. TrEMBL
Match: A0A0A0KMQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157230 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.9e-30
Identity = 74/138 (53.62%), Postives = 106/138 (76.81%), Query Frame = 1 

Query: 1   MHETVKYIQYIQTRIQQLSDQRDDLKSL---SDENMAISTGETLNSSRRDSVVVRSKNGL 60
           MHETVKYIQ++QT+IQ L ++RD+LK      +++  I+T ETLNSS+RDSV+V  ++  
Sbjct: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPRSCG 180

Query: 61  GIQVVLDTATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQIVDNDGCYPSI 120
           G+Q++LDTAT HRLP+SN+I+ L  + L+I+SC +T+ N+R+LHTIE +   +     +I
Sbjct: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVD---VETI 240

Query: 121 DVSELQHKLTNLEYVPLD 136
           D+SELQ+KLTNLEY PLD
Sbjct: 241 DMSELQNKLTNLEYFPLD 255

[Close]
BLAST of CmoCh15G012460 vs. TrEMBL
Match: A0A097IYP0_CUCSA (BHLH transcription factor OS=Cucumis sativus GN=Csa5G157230 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.2e-30
Identity = 74/138 (53.62%), Postives = 106/138 (76.81%), Query Frame = 1 

Query: 1   MHETVKYIQYIQTRIQQLSDQRDDLKSL---SDENMAISTGETLNSSRRDSVVVRSKNGL 60
           MHETVKYIQ++QT+IQ L ++RD+LK      +++  I+T ETLNSS+RDSV+V  ++  
Sbjct: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPRSCG 180

Query: 61  GIQVVLDTATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQIVDNDGCYPSI 120
           G+Q++LDTAT HRLP+SN+I+ L  + L+I+SC +T+ N+R+LHTIE +   +     +I
Sbjct: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVD---VETI 240

Query: 121 DVSELQHKLTNLEYVPLD 136
           D+SELQ+KLTNLEY PLD
Sbjct: 241 DMSELQNKLTNLEYFPLD 255

[Close]
BLAST of CmoCh15G012460 vs. TrEMBL
Match: A0A061G572_THECC (Basic helix-loop-helix DNA-binding superfamily protein, putative OS=Theobroma cacao GN=TCM_016134 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.9e-20
Identity = 60/129 (46.51%), Postives = 89/129 (68.99%), Query Frame = 1 

Query: 1   MHETVKYIQYIQTRIQQLSDQRDDLKSLSDENMAISTGETLNSSRRDSVVVRSKNGLGIQ 60
           MHE VKYI+++Q RI +LSD+R++LK  S+ +   S  E+      DSVVVR    +G++
Sbjct: 130 MHEAVKYIKHLQNRITELSDKREELKRSSNLHTPSSMPESSPDCSEDSVVVRGCM-VGVE 189

Query: 61  VVLDTATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQIVDNDGCYPSIDVS 120
           + ++T  +  LP+SNV+ V+  EGL +++C++TKVNER LHTI  ++  NDG   SI++S
Sbjct: 190 IAINTGLRPGLPLSNVLDVIVAEGLSVVNCISTKVNERLLHTIVLEV--NDG--RSIELS 249

Query: 121 ELQHKLTNL 130
           ELQ KLT L
Sbjct: 250 ELQQKLTKL 253

[Close]
BLAST of CmoCh15G012460 vs. TAIR10
Match: AT4G25410.1 (AT4G25410.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 59.7 bits (143), Expect = 1.6e-09
Identity = 42/128 (32.81%), Postives = 75/128 (58.59%), Query Frame = 1 

Query: 5   VKYIQYIQTRIQQLSDQRDDLKSLSDENMAIS-----TGETLNSSRRDSVVVRSK-NGLG 64
           V +I+  + RI++LS +RD+L   + +    +     TG  +  S   +V+V+   +GL 
Sbjct: 88  VNFIKDTEARIKELSARRDELSRETGQGYKSNPDPGKTGSDVGKSEPATVMVQPHVSGLE 147

Query: 65  IQVVLDTATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQIVDNDGCYPSID 124
           + V  +++    LP+S V+  +  +GLE++S  TT+VN+R +HTI+ + V++ GC   ID
Sbjct: 148 VVVSSNSSGPEALPLSKVLETIQEKGLEVMSSFTTRVNDRLMHTIQVE-VNSFGC---ID 207

Query: 125 VSELQHKL 127
           +  LQ KL
Sbjct: 208 LLWLQQKL 211

[Close]
BLAST of CmoCh15G012460 vs. TAIR10
Match: AT5G51790.1 (AT5G51790.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 58.9 bits (141), Expect = 2.7e-09
Identity = 44/126 (34.92%), Postives = 72/126 (57.14%), Query Frame = 1 

Query: 5   VKYIQYIQTRIQQLSDQRDDLK-SLSDENMAISTGETLNSSRRDSVVVRSKNGL-GIQVV 64
           V +I+  QTRI+ LS +RD+LK  + D      +G    SSR +   V  +  + G +VV
Sbjct: 72  VSFIKDTQTRIKDLSARRDELKREIGDPTSLTGSGSGSGSSRSEPASVMVQPCVSGFEVV 131

Query: 65  LDTATQ--HRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQIVDNDGCYPSIDVS 124
           + +        P+S V+ VL  +GLE++S +T +VNER ++TI+ ++   D C+   D++
Sbjct: 132 VSSLASGLEAWPLSRVLEVLHGQGLEVISSLTARVNERLMYTIQVEVNSFD-CF---DLA 191

Query: 125 ELQHKL 127
            LQ KL
Sbjct: 192 WLQQKL 193

[Close]
BLAST of CmoCh15G012460 vs. TAIR10
Match: AT4G25400.1 (AT4G25400.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 56.6 bits (135), Expect = 1.4e-08
Identity = 40/123 (32.52%), Postives = 69/123 (56.10%), Query Frame = 1 

Query: 5   VKYIQYIQTRIQQLSDQRDDLKSLSDENMAISTGETLNSSRRDSVVVRSKNGLGIQVVLD 64
           V YI Y+Q  I+ ++ +RDDL  LS  +   S  +  N    + VV+R    +GI++VL 
Sbjct: 47  VNYIDYLQRNIKDINSKRDDLVLLSGRSFRSSNEQEWNEIS-NHVVIRPCL-VGIEIVLS 106

Query: 65  TATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQIVDNDGCYPSIDVSELQH 124
                + P S+V++VL   GL +L  + + VN+R +HT++ ++ D       ID+++L+ 
Sbjct: 107 IL---QTPFSSVLQVLREHGLYVLGYICSSVNDRLIHTLQAEVND----LALIDLADLKD 160

Query: 125 KLT 128
            LT
Sbjct: 167 TLT 160

[Close]
BLAST of CmoCh15G012460 vs. TAIR10
Match: AT5G51780.1 (AT5G51780.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 56.6 bits (135), Expect = 1.4e-08
Identity = 42/142 (29.58%), Postives = 82/142 (57.75%), Query Frame = 1 

Query: 1   MHETVKYIQYIQTRIQQLSDQRDDLKSLSDENMAISTGETLNSS----RRDSVVVRSKNG 60
           ++E V YI+Y+Q +I++LS +RDDL       M +S G  L SS    + D  ++  KN 
Sbjct: 43  VNEAVNYIKYLQRKIKELSVRRDDL-------MVLSRGSLLGSSNGDFKEDVEMISGKNH 102

Query: 61  -------LGIQVVLDTATQHRLP-ISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQIV 120
                  +G++++L +      P  S+V++VL+  GL +L+ +++ V++R ++TI+ ++ 
Sbjct: 103 VVVRQCLVGVEIMLSSRCCGGQPRFSSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVN 162

Query: 121 DNDGCYPSIDVSELQHKLTNLE 131
           D       ID++EL+ +L  ++
Sbjct: 163 D---MALMIDLAELEKRLIRMK 174

[Close]
BLAST of CmoCh15G012460 vs. TAIR10
Match: AT1G12540.1 (AT1G12540.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 53.1 bits (126), Expect = 1.5e-07
Identity = 39/138 (28.26%), Postives = 78/138 (56.52%), Query Frame = 1 

Query: 3   ETVKYIQYIQTRIQQLSDQRDDLK----------SLSDENMAISTGETLNSSRRDSVVVR 62
           E V YI+ +Q +I+++S++RD +K            S  ++A ST   +  +   +VVVR
Sbjct: 118 EAVNYIKDLQKKIKEVSEKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDTNI-AVVVR 177

Query: 63  SKNGLGIQVVLDTATQHRLPISNVIRVLAVEG-LEILSCVTTKVNERYLHTIECQIVDND 122
               +G+++V+    +H   +S+V+++LA E    I+SC++T++++ ++HTI  ++ +  
Sbjct: 178 PCL-IGLEIVVSCCNRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASEVEEGI 237

Query: 123 GCYPSIDVSELQHKLTNL 130
             Y     SELQ K+  +
Sbjct: 238 EVY----FSELQEKIIKI 249

[Close]
BLAST of CmoCh15G012460 vs. NCBI nr
Match: gi|659073660|ref|XP_008437183.1| (PREDICTED: transcription factor bHLH118-like isoform X2 [Cucumis melo])

HSP 1 Score: 178.3 bits (451), Expect = 8.8e-42
Identity = 89/137 (64.96%), Postives = 113/137 (82.48%), Query Frame = 1 

Query: 1   MHETVKYIQYIQTRIQQLSDQRDDLKSLSDENMAI-STGETLNSSRRDSVVVRSKNGLGI 60
           M ETV YIQ++Q RIQQL D+RD L+ L+++ M I  T ETLNSS RDSVVVR+K+G+GI
Sbjct: 122 MQETVSYIQHMQRRIQQLKDKRDKLRELANQTMVIIGTTETLNSSERDSVVVRAKDGIGI 181

Query: 61  QVVLDTATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQ-IVDNDGCYPSID 120
           QVVLDTAT+HRLP+S  ++ L  EGLEIL+C++ ++NER++HTIECQ I+ +DGCYP+ID
Sbjct: 182 QVVLDTATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCYPTID 241

Query: 121 VSELQHKLTNLEYVPLD 136
            S LQHKL NLEY PLD
Sbjct: 242 ASMLQHKLANLEYYPLD 258

[Close]
BLAST of CmoCh15G012460 vs. NCBI nr
Match: gi|821595469|ref|NP_001295816.1| (transcription factor bHLH118-like [Cucumis sativus])

HSP 1 Score: 164.1 bits (414), Expect = 1.7e-37
Identity = 83/138 (60.14%), Postives = 108/138 (78.26%), Query Frame = 1 

Query: 1   MHETVKYIQYIQTRIQQLSDQRDDLKSLSDENMAISTG--ETLNSSRRDSVVVRSKNGLG 60
           M ETV YIQ++Q RIQQL D+R  L+ L+ +      G  ETLNSS R S VVR+K+G+G
Sbjct: 114 MQETVSYIQHMQRRIQQLKDKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGIG 173

Query: 61  IQVVLDTATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQ-IVDNDGCYPSI 120
           IQVVLDTAT+ RLP+S  ++ L  EGLEIL+C++ ++NER++HTIECQ ++++DGCYP+I
Sbjct: 174 IQVVLDTATKQRLPLSIFVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYPTI 233

Query: 121 DVSELQHKLTNLEYVPLD 136
           DVS LQHKL NLEY PLD
Sbjct: 234 DVSVLQHKLANLEYYPLD 251

[Close]
BLAST of CmoCh15G012460 vs. NCBI nr
Match: gi|659073666|ref|XP_008437186.1| (PREDICTED: transcription factor bHLH118-like [Cucumis melo])

HSP 1 Score: 162.2 bits (409), Expect = 6.5e-37
Identity = 81/136 (59.56%), Postives = 109/136 (80.15%), Query Frame = 1 

Query: 1   MHETVKYIQYIQTRIQQLSDQRDDLKSLSDENMAISTGETLNSSRRDSVVVRSKNGLGIQ 60
           M +TV Y+Q+IQ RIQQL D+RD L+ L+++    +  + L+SS RDSVVVR+K+G+GIQ
Sbjct: 1   MQQTVSYVQHIQRRIQQLKDKRDKLRELANQ----TNRKRLSSSERDSVVVRAKDGIGIQ 60

Query: 61  VVLDTATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQ-IVDNDGCYPSIDV 120
           VVLDT T+HRLP S  ++ L VEGLEIL+C++ +++ER++HTIECQ I++NDGCY +IDV
Sbjct: 61  VVLDTTTKHRLPFSIFVQALVVEGLEILNCISHRLDERFIHTIECQPILNNDGCYTTIDV 120

Query: 121 SELQHKLTNLEYVPLD 136
           S  QHKL NLEY PLD
Sbjct: 121 SMFQHKLANLEYYPLD 132

[Close]
BLAST of CmoCh15G012460 vs. NCBI nr
Match: gi|659073658|ref|XP_008437182.1| (PREDICTED: transcription factor bHLH36-like isoform X1 [Cucumis melo])

HSP 1 Score: 149.4 bits (376), Expect = 4.4e-33
Identity = 80/138 (57.97%), Postives = 107/138 (77.54%), Query Frame = 1 

Query: 1   MHETVKYIQYIQTRIQQLSDQRDDLKSL--SDENMAISTGETLNSSRRDSVVVRSKNGL- 60
           MHETVKYI+Y+Q++IQ+L D+RD+LK L  +++N  +   ETL S++RD VVVR+++G  
Sbjct: 122 MHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPDMVETETLKSTKRDKVVVRARDGSG 181

Query: 61  GIQVVLDTATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQIVDNDGCYPSI 120
           GIQV+LDTAT+HRLP+SN++  L  +GLEILSC + K+N+R+LHTIE Q V      P I
Sbjct: 182 GIQVILDTATRHRLPLSNILVALTDQGLEILSCSSNKLNDRFLHTIESQPVFTSTNSPII 241

Query: 121 DVSELQHKLTNLEYVPLD 136
           DVS LQ+ LTNLEY PLD
Sbjct: 242 DVSGLQYTLTNLEYCPLD 259

[Close]
BLAST of CmoCh15G012460 vs. NCBI nr
Match: gi|449459720|ref|XP_004147594.1| (PREDICTED: transcription factor bHLH36-like [Cucumis sativus])

HSP 1 Score: 143.7 bits (361), Expect = 2.4e-31
Identity = 77/139 (55.40%), Postives = 105/139 (75.54%), Query Frame = 1 

Query: 1   MHETVKYIQYIQTRIQQLSDQRDDLKSL--SDENMAISTGETLNSSRRDSVVVRSKNGLG 60
           MHETVKYI+Y+Q++IQ+L D+RD+LK L  +++N  +   ETL S++RD VVVR+++G G
Sbjct: 122 MHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPGMVETETLQSTKRDKVVVRARDGSG 181

Query: 61  -IQVVLDTATQHRLPISNVIRVLAVEGLEILSCVTTKVNERYLHTIECQ-IVDNDGCYPS 120
            IQV+LDT TQHRL +SN++  L  +G EILSC + K+N+R+LHTIE Q  V  D   P 
Sbjct: 182 GIQVILDTPTQHRLTLSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDTNSPL 241

Query: 121 IDVSELQHKLTNLEYVPLD 136
           ID+S+LQ+ L NLEY PLD
Sbjct: 242 IDISDLQYMLANLEYCPLD 260

The following BLAST results are available for this feature:
BLAST of CmoCh15G012460 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BH126_ARATH2.9e-0832.81Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126 PE=2 SV=1[more]
BH120_ARATH4.9e-0834.92Transcription factor bHLH120 OS=Arabidopsis thaliana GN=BHLH120 PE=2 SV=2[more]
BH118_ARATH2.4e-0732.52Transcription factor bHLH118 OS=Arabidopsis thaliana GN=BHLH118 PE=2 SV=1[more]
BH036_ARATH2.4e-0729.58Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2 SV=1[more]
BH055_ARATH2.7e-0628.26Transcription factor bHLH55 OS=Arabidopsis thaliana GN=BHLH55 PE=2 SV=1[more]
BLAST of CmoCh15G012460 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A097IYN6_CUCSA1.2e-3760.14BHLH transcription factor OS=Cucumis sativus GN=Csa5G156220 PE=2 SV=1[more]
A0A0A0KKN9_CUCSA1.7e-3155.40Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157220 PE=4 SV=1[more]
A0A0A0KMQ4_CUCSA1.9e-3053.62Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157230 PE=4 SV=1[more]
A0A097IYP0_CUCSA3.2e-3053.62BHLH transcription factor OS=Cucumis sativus GN=Csa5G157230 PE=2 SV=1[more]
A0A061G572_THECC3.9e-2046.51Basic helix-loop-helix DNA-binding superfamily protein, putative OS=Theobroma ca... [more]
BLAST of CmoCh15G012460 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G25410.11.6e-0932.81 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G51790.12.7e-0934.92 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT4G25400.11.4e-0832.52 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G51780.11.4e-0829.58 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G12540.11.5e-0728.26 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of CmoCh15G012460 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659073660|ref|XP_008437183.1|8.8e-4264.96PREDICTED: transcription factor bHLH118-like isoform X2 [Cucumis melo][more]
gi|821595469|ref|NP_001295816.1|1.7e-3760.14transcription factor bHLH118-like [Cucumis sativus][more]
gi|659073666|ref|XP_008437186.1|6.5e-3759.56PREDICTED: transcription factor bHLH118-like [Cucumis melo][more]
gi|659073658|ref|XP_008437182.1|4.4e-3357.97PREDICTED: transcription factor bHLH36-like isoform X1 [Cucumis melo][more]
gi|449459720|ref|XP_004147594.1|2.4e-3155.40PREDICTED: transcription factor bHLH36-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR015660MASH1/Ascl1a-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G012460.1CmoCh15G012460.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015660Achaete-scute transcription factor-relatedPANTHERPTHR13935ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATEDcoord: 1..128
score: 9.8
NoneNo IPR availablePANTHERPTHR13935:SF54TRANSCRIPTION FACTOR BHLH118-RELATEDcoord: 1..128
score: 9.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh15G012460Csa3G178580Cucumber (Chinese Long) v2cmocuB269
CmoCh15G012460CSPI03G16380Wild cucumber (PI 183967)cmocpiB276
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh15G012460Cucumber (Chinese Long) v3cmocucB0326
CmoCh15G012460Cucumber (Chinese Long) v3cmocucB0327
CmoCh15G012460Cucumber (Chinese Long) v3cmocucB0331
CmoCh15G012460Cucumber (Chinese Long) v3cmocucB0347
CmoCh15G012460Watermelon (97103) v2cmowmbB270
CmoCh15G012460Watermelon (97103) v2cmowmbB272
CmoCh15G012460Watermelon (97103) v2cmowmbB286
CmoCh15G012460Watermelon (97103) v2cmowmbB293
CmoCh15G012460Watermelon (97103) v2cmowmbB296
CmoCh15G012460Wax gourdcmowgoB0369
CmoCh15G012460Wax gourdcmowgoB0383
CmoCh15G012460Cucurbita moschata (Rifu)cmocmoB239
CmoCh15G012460Cucurbita moschata (Rifu)cmocmoB242
CmoCh15G012460Cucurbita moschata (Rifu)cmocmoB250
CmoCh15G012460Cucurbita moschata (Rifu)cmocmoB271
CmoCh15G012460Watermelon (Charleston Gray)cmowcgB247
CmoCh15G012460Cucumber (Gy14) v1cgycmoB0702
CmoCh15G012460Cucumber (Gy14) v1cgycmoB0824
CmoCh15G012460Cucumber (Gy14) v1cgycmoB0884
CmoCh15G012460Cucurbita maxima (Rimu)cmacmoB287
CmoCh15G012460Cucurbita maxima (Rimu)cmacmoB583
CmoCh15G012460Cucurbita maxima (Rimu)cmacmoB803
CmoCh15G012460Wild cucumber (PI 183967)cmocpiB275
CmoCh15G012460Wild cucumber (PI 183967)cmocpiB283
CmoCh15G012460Wild cucumber (PI 183967)cmocpiB295
CmoCh15G012460Cucumber (Chinese Long) v2cmocuB268
CmoCh15G012460Cucumber (Chinese Long) v2cmocuB286
CmoCh15G012460Melon (DHL92) v3.5.1cmomeB238
CmoCh15G012460Melon (DHL92) v3.5.1cmomeB269
CmoCh15G012460Melon (DHL92) v3.5.1cmomeB270
CmoCh15G012460Watermelon (Charleston Gray)cmowcgB235
CmoCh15G012460Watermelon (Charleston Gray)cmowcgB254
CmoCh15G012460Watermelon (97103) v1cmowmB245
CmoCh15G012460Watermelon (97103) v1cmowmB257
CmoCh15G012460Watermelon (97103) v1cmowmB267
CmoCh15G012460Cucurbita pepo (Zucchini)cmocpeB268
CmoCh15G012460Cucurbita pepo (Zucchini)cmocpeB292
CmoCh15G012460Cucurbita pepo (Zucchini)cmocpeB300
CmoCh15G012460Bottle gourd (USVL1VR-Ls)cmolsiB255
CmoCh15G012460Bottle gourd (USVL1VR-Ls)cmolsiB275
CmoCh15G012460Bottle gourd (USVL1VR-Ls)cmolsiB277
CmoCh15G012460Bottle gourd (USVL1VR-Ls)cmolsiB279
CmoCh15G012460Cucumber (Gy14) v2cgybcmoB295
CmoCh15G012460Cucumber (Gy14) v2cgybcmoB296
CmoCh15G012460Cucumber (Gy14) v2cgybcmoB300
CmoCh15G012460Cucumber (Gy14) v2cgybcmoB583
CmoCh15G012460Melon (DHL92) v3.6.1cmomedB270
CmoCh15G012460Melon (DHL92) v3.6.1cmomedB304
CmoCh15G012460Melon (DHL92) v3.6.1cmomedB305
CmoCh15G012460Silver-seed gourdcarcmoB1169
CmoCh15G012460Silver-seed gourdcarcmoB1230
CmoCh15G012460Silver-seed gourdcarcmoB1252