CmoCh09G006670.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAGGTGGGCATCCGAACTACATGAATCTCCTCTCTTATCCAATCCCACTCAGAGCTTCCAAAGAGCTGAAGAAGAAATCTCTACAATGGCTGTAAATGCCACTCCATTACGCCTCCCACCAGCCATTCCCACTGGGAAATGGAGTTCCAATGCTAGAGTTTGCCTCCCCAGAAAACCCCCAACTCAATCTACTTCCTCTTTCAACAAGAGCTTCAGATCTTGTTCCAATTTCTTAAAAGAAAAATTTCTTAAATACCATTTGTATCCCTTAAAAGAAAAATTTTGTTCCCCTCTCCAAACAATGTGGGATCTCACAATCCACCCCCCATAGAGTCCCAGCGTCCTCGCTGCACACCGCCTGATGTCTGGCTCTAATACCATTTGTAACAGCCCAAGTCCATCGCTAGCAGGTATTGTCTGCTTTGACTCATTACGTATCGTTGTCAGCCTCACAGTTCTAAAATGTTTCTGTTAGGAAAAAGTTTCTACACTCTTATAAGAAATGCTTCGTTCCCCTCTCCAACCGAGGTGAGATGAATGTGGGATCTCACAGCTTACTATGAATTTTATACATCCAAAATATTGATACTTTTAACTAAACTATATTCTTCACTCTGATCTTCATTAGCTGCAAATATTTCAGGTTTCAGAGAGAAAGTTTTTGCAATCATTGGTGTTAAGGTCTATGCTGCAGGACTATACATCAATTCATCCATCTCAAACGAATTAAACGCTTGGAGGGGTCGATCGGCTGCTGCAATTCAGGAGGATTCTTCCTTGTTCAATATAATTTTTCAGTGTAATAACCATTACATATAAATTATACGTAACTATATGATTATAGAAGTTGTGGATTATTTATGTTACTACAAGTTTATTGTCTTTCAATGGCAGCTCCTTCAGAAAAATCTTTACAGATTGTTCTCGTCCGAGATGTCGATGGCAAAACATTCTGGGACGCCTTGGACGACGCCATTTCTCCAAGAATCAAAGCACCAACACCGGTCGATGAATCTGCATTATCTACCTTTCGTAGCATCTTCGAGGGGCGGTCTCTTAAGAAAGGAACCTTCATATTCTTGACTTGGTTGGAACCTCCAAAGATGCTTGTATGTTTAAACTTTTAACTGTCTTACATTGTCTTTTCTTTTCTTTTCCTTTTATTAATGGTGAATTGCAGGTTAGCATCTCAGTTGACGGCCCACCGACAGGAATAGAAGCTACAATCGAATCAAACAATGTGACTTCAGCTCTTTTCGATGTTTTTTTCGGGGACAATCCTGTTTCTCCTACTTTGAAGGCTTCTGTTGCAGCTGGATTGTCTGCAGTTTTGAAATAGGACCAGGATTGTCTTGTTCTTATTAGTTTGAATGAACATTTGGATAAGGTACCACCAAACGAATTACAAATGCGAGATCACAATAAGTGTAGAATACATTTTAGAGAAGGAACCTACTCAAGAATCTGTTACAATGCTACTTGACTTTAGCTGCTCAAGCACTTTGACGACCTCTGCCATTGTCGGTCGCCGAGCAGGTTCTGGTTCAAGACACTTCAATGCTATGCTAAATACGACATTAACCTCGTCAACCGGAAAACAGCTCAAACTTCTGTCAAGTACATATTCTTCCCTTTTCTCCTGAACAACTGTTTTCACCTGACATTTAGATGACATTATGAAAGTCAGACAAGGAATAGCTTATTGTTCAGCTGTC ATGACAGGTTTCAGAGAGAAAGTTTTTGCAATCATTGGTGTTAAGGTCTATGCTGCAGGACTATACATCAATTCATCCATCTCAAACGAATTAAACGCTTGGAGGGGTCGATCGGCTGCTGCAATTCAGGAGGATTCTTCCTTGTTCAATATAATTTTTCAGTCTCCTTCAGAAAAATCTTTACAGATTGTTCTCGTCCGAGATGTCGATGGCAAAACATTCTGGGACGCCTTGGACGACGCCATTTCTCCAAGAATCAAAGCACCAACACCGGTCGATGAATCTGCATTATCTACCTTTCGTAGCATCTTCGAGGGGCGGTCTCTTAAGAAAGGAACCTTCATATTCTTGACTTGGTTGGAACCTCCAAAGATGCTTGTTAGCATCTCAGTTGACGGCCCACCGACAGGAATAGAAGCTACAATCGAATCAAACAATGTGACTTCAGCTCTTTTCGATGTTTTTTTCGGGGACAATCCTGTTTCTCCTACTTTGAAGGCTTCTGTTGCAGCTGGATTGTCTGCAGTTTTGAAATAGGACCAGGATTGTCTTGTTCTTATTAGTTTGAATGAACATTTGGATAAGGTACCACCAAACGAATTACAAATGCGAGATCACAATAAGTGTAGAATACATTTTAGAGAAGGAACCTACTCAAGAATCTGTTACAATGCTACTTGACTTTAGCTGCTCAAGCACTTTGACGACCTCTGCCATTGTCGGTCGCCGAGCAGGTTCTGGTTCAAGACACTTCAATGCTATGCTAAATACGACATTAACCTCGTCAACCGGAAAACAGCTCAAACTTCTGTCAAGTACATATTCTTCCCTTTTCTCCTGAACAACTGTTTTCACCTGACATTTAGATGACATTATGAAAGTCAGACAAGGAATAGCTTATTGTTCAGCTGTC ATGACAGGTTTCAGAGAGAAAGTTTTTGCAATCATTGGTGTTAAGGTCTATGCTGCAGGACTATACATCAATTCATCCATCTCAAACGAATTAAACGCTTGGAGGGGTCGATCGGCTGCTGCAATTCAGGAGGATTCTTCCTTGTTCAATATAATTTTTCAGTCTCCTTCAGAAAAATCTTTACAGATTGTTCTCGTCCGAGATGTCGATGGCAAAACATTCTGGGACGCCTTGGACGACGCCATTTCTCCAAGAATCAAAGCACCAACACCGGTCGATGAATCTGCATTATCTACCTTTCGTAGCATCTTCGAGGGGCGGTCTCTTAAGAAAGGAACCTTCATATTCTTGACTTGGTTGGAACCTCCAAAGATGCTTGTTAGCATCTCAGTTGACGGCCCACCGACAGGAATAGAAGCTACAATCGAATCAAACAATGTGACTTCAGCTCTTTTCGATGTTTTTTTCGGGGACAATCCTGTTTCTCCTACTTTGAAGGCTTCTGTTGCAGCTGGATTGTCTGCAGTTTTGAAATAG
BLAST of CmoCh09G006670.1 vs. Swiss-Prot
Match: FAP3_ARATH (Fatty-acid-binding protein 3, chloroplastic OS=Arabidopsis thaliana GN=FAP3 PE=1 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 5.4e-63 Identity = 124/176 (70.45%), Postives = 142/176 (80.68%), Query Frame = 1
BLAST of CmoCh09G006670.1 vs. Swiss-Prot
Match: CFI_CITSI (Chalcone--flavonone isomerase OS=Citrus sinensis GN=CHI PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.4e-10 Identity = 48/170 (28.24%), Postives = 82/170 (48.24%), Query Frame = 1
BLAST of CmoCh09G006670.1 vs. Swiss-Prot
Match: CFI2_FRAAN (Chalcone--flavonone isomerase 2 OS=Fragaria ananassa GN=CHI2 PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.4e-10 Identity = 46/171 (26.90%), Postives = 80/171 (46.78%), Query Frame = 1
BLAST of CmoCh09G006670.1 vs. Swiss-Prot
Match: CFI_VERHY (Chalcone--flavonone isomerase OS=Verbena hybrida GN=CHI PE=2 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 6.9e-10 Identity = 44/170 (25.88%), Postives = 79/170 (46.47%), Query Frame = 1
BLAST of CmoCh09G006670.1 vs. Swiss-Prot
Match: CFI_CANGE (Chalcone--flavonone isomerase OS=Canna generalis GN=CHI PE=2 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.2e-09 Identity = 46/168 (27.38%), Postives = 82/168 (48.81%), Query Frame = 1
BLAST of CmoCh09G006670.1 vs. TrEMBL
Match: A0A0A0L368_CUCSA (Chalcone-flavonone isomerase family protein OS=Cucumis sativus GN=Csa_4G622760 PE=3 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 1.8e-86 Identity = 165/177 (93.22%), Postives = 173/177 (97.74%), Query Frame = 1
BLAST of CmoCh09G006670.1 vs. TrEMBL
Match: A0A067EAL6_CITSI (Chalcone-flavonone isomerase family protein OS=Citrus sinensis GN=CISIN_1g023649mg PE=3 SV=1) HSP 1 Score: 285.0 bits (728), Expect = 6.1e-74 Identity = 141/177 (79.66%), Postives = 161/177 (90.96%), Query Frame = 1
BLAST of CmoCh09G006670.1 vs. TrEMBL
Match: V4VR96_9ROSI (Chalcone-flavonone isomerase family protein OS=Citrus clementina GN=CICLE_v10021578mg PE=3 SV=1) HSP 1 Score: 285.0 bits (728), Expect = 6.1e-74 Identity = 141/177 (79.66%), Postives = 161/177 (90.96%), Query Frame = 1
BLAST of CmoCh09G006670.1 vs. TrEMBL
Match: E0CRY9_VITVI (Chalcone-flavonone isomerase family protein OS=Vitis vinifera GN=VIT_19s0014g00100 PE=3 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 1.4e-73 Identity = 142/177 (80.23%), Postives = 160/177 (90.40%), Query Frame = 1
BLAST of CmoCh09G006670.1 vs. TrEMBL
Match: M5WV36_PRUPE (Chalcone-flavonone isomerase family protein OS=Prunus persica GN=PRUPE_ppa011189mg PE=3 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 8.9e-73 Identity = 140/177 (79.10%), Postives = 156/177 (88.14%), Query Frame = 1
BLAST of CmoCh09G006670.1 vs. TAIR10
Match: AT1G53520.1 (AT1G53520.1 Chalcone-flavanone isomerase family protein) HSP 1 Score: 241.9 bits (616), Expect = 3.0e-64 Identity = 124/176 (70.45%), Postives = 142/176 (80.68%), Query Frame = 1
BLAST of CmoCh09G006670.1 vs. TAIR10
Match: AT3G55120.1 (AT3G55120.1 Chalcone-flavanone isomerase family protein) HSP 1 Score: 53.1 bits (126), Expect = 2.0e-07 Identity = 44/176 (25.00%), Postives = 79/176 (44.89%), Query Frame = 1
BLAST of CmoCh09G006670.1 vs. NCBI nr
Match: gi|449456545|ref|XP_004146009.1| (PREDICTED: fatty-acid-binding protein 3 isoform X1 [Cucumis sativus]) HSP 1 Score: 326.6 bits (836), Expect = 2.6e-86 Identity = 165/177 (93.22%), Postives = 173/177 (97.74%), Query Frame = 1
BLAST of CmoCh09G006670.1 vs. NCBI nr
Match: gi|778695591|ref|XP_011654021.1| (PREDICTED: fatty-acid-binding protein 3 isoform X2 [Cucumis sativus]) HSP 1 Score: 326.6 bits (836), Expect = 2.6e-86 Identity = 165/177 (93.22%), Postives = 173/177 (97.74%), Query Frame = 1
BLAST of CmoCh09G006670.1 vs. NCBI nr
Match: gi|659103021|ref|XP_008452433.1| (PREDICTED: fatty-acid-binding protein 3 isoform X2 [Cucumis melo]) HSP 1 Score: 325.5 bits (833), Expect = 5.9e-86 Identity = 165/177 (93.22%), Postives = 173/177 (97.74%), Query Frame = 1
BLAST of CmoCh09G006670.1 vs. NCBI nr
Match: gi|659103018|ref|XP_008452432.1| (PREDICTED: fatty-acid-binding protein 3 isoform X1 [Cucumis melo]) HSP 1 Score: 325.5 bits (833), Expect = 5.9e-86 Identity = 165/177 (93.22%), Postives = 173/177 (97.74%), Query Frame = 1
BLAST of CmoCh09G006670.1 vs. NCBI nr
Match: gi|568847969|ref|XP_006477800.1| (PREDICTED: fatty-acid-binding protein 3, chloroplastic [Citrus sinensis]) HSP 1 Score: 287.7 bits (735), Expect = 1.4e-74 Identity = 142/177 (80.23%), Postives = 162/177 (91.53%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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