CmoCh05G008650.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTTTCAGTATACACAGAGTACTGGTTGTCCTCCTCATGTGTGTTGCACTTTTAGCTGTTCAACCAGATCAGACTTGTGCTTTGAGAAGCATAGACCTTGCTCTAAGATCTAGTCGCCACATTCTTGTTGAAGACTCGAGGGTGGAGGAAAAGAACATGAAAAGGAATTCACTACCACGAAACAGCAAGTTTGATCCAAATCAATCAAGCAAAAGACGGGTTCGACAAGGTTCGGATCCTATCCACAACAAGTCTTAG ATGGTTTTCAGTATACACAGAGTACTGGTTGTCCTCCTCATGTGTGTTGCACTTTTAGCTGTTCAACCAGATCAGACTTGTGCTTTGAGAAGCATAGACCTTGCTCTAAGATCTAGTCGCCACATTCTTGTTGAAGACTCGAGGGTGGAGGAAAAGAACATGAAAAGGAATTCACTACCACGAAACAGCAAGTTTGATCCAAATCAATCAAGCAAAAGACGGGTTCGACAAGGTTCGGATCCTATCCACAACAAGTCTTAG ATGGTTTTCAGTATACACAGAGTACTGGTTGTCCTCCTCATGTGTGTTGCACTTTTAGCTGTTCAACCAGATCAGACTTGTGCTTTGAGAAGCATAGACCTTGCTCTAAGATCTAGTCGCCACATTCTTGTTGAAGACTCGAGGGTGGAGGAAAAGAACATGAAAAGGAATTCACTACCACGAAACAGCAAGTTTGATCCAAATCAATCAAGCAAAAGACGGGTTCGACAAGGTTCGGATCCTATCCACAACAAGTCTTAG
BLAST of CmoCh05G008650.1 vs. TrEMBL
Match: A0A0A0LHH0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G101100 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 1.6e-27 Identity = 73/87 (83.91%), Postives = 79/87 (90.80%), Query Frame = 1
BLAST of CmoCh05G008650.1 vs. TrEMBL
Match: A5APJ5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010312 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 8.5e-13 Identity = 52/95 (54.74%), Postives = 66/95 (69.47%), Query Frame = 1
BLAST of CmoCh05G008650.1 vs. TrEMBL
Match: W9QB86_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001442 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.0e-10 Identity = 47/95 (49.47%), Postives = 66/95 (69.47%), Query Frame = 1
BLAST of CmoCh05G008650.1 vs. TrEMBL
Match: A0A067GTG0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034426mg PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 1.4e-10 Identity = 45/95 (47.37%), Postives = 64/95 (67.37%), Query Frame = 1
BLAST of CmoCh05G008650.1 vs. TrEMBL
Match: V4VH78_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033178mg PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 1.4e-10 Identity = 45/95 (47.37%), Postives = 64/95 (67.37%), Query Frame = 1
BLAST of CmoCh05G008650.1 vs. NCBI nr
Match: gi|700206261|gb|KGN61380.1| (hypothetical protein Csa_2G101100 [Cucumis sativus]) HSP 1 Score: 129.8 bits (325), Expect = 2.3e-27 Identity = 73/87 (83.91%), Postives = 79/87 (90.80%), Query Frame = 1
BLAST of CmoCh05G008650.1 vs. NCBI nr
Match: gi|147770466|emb|CAN64769.1| (hypothetical protein VITISV_010312 [Vitis vinifera]) HSP 1 Score: 80.9 bits (198), Expect = 1.2e-12 Identity = 52/95 (54.74%), Postives = 66/95 (69.47%), Query Frame = 1
BLAST of CmoCh05G008650.1 vs. NCBI nr
Match: gi|1009154299|ref|XP_015895094.1| (PREDICTED: CLAVATA3/ESR (CLE)-related protein 45 [Ziziphus jujuba]) HSP 1 Score: 73.9 bits (180), Expect = 1.5e-10 Identity = 46/96 (47.92%), Postives = 65/96 (67.71%), Query Frame = 1
BLAST of CmoCh05G008650.1 vs. NCBI nr
Match: gi|703061718|ref|XP_010086550.1| (hypothetical protein L484_001442 [Morus notabilis]) HSP 1 Score: 73.9 bits (180), Expect = 1.5e-10 Identity = 47/95 (49.47%), Postives = 66/95 (69.47%), Query Frame = 1
BLAST of CmoCh05G008650.1 vs. NCBI nr
Match: gi|567892337|ref|XP_006438689.1| (hypothetical protein CICLE_v10033178mg [Citrus clementina]) HSP 1 Score: 73.6 bits (179), Expect = 1.9e-10 Identity = 45/95 (47.37%), Postives = 64/95 (67.37%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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