CmoCh02G003380.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh02G003380.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	SAUR-like auxin-responsive protein family
Location	Cmo_Chr02 : 1733363 .. 1733656 (-)
Sequence length	294

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATTCGGTTGCTATCTTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTTACCAAAAACCAGTTGGACGTTCCAAAAGGTCATGTGGCTGTTTATGTAGGAGAGATCCAACGGAAGCGGTTCGTGGTTCCGATATCTTACCTAAACCATCCATCGTTCCAGAAACTGCTCAGCCACGCCGAGGAGGAGTTTGGCTTCCATCATCCACAAGGGGGCCTAACAATTCCTTGCAGAGAAGATGCCTTCGTTGATCTCACTTCTAGATTGCAAGTTTCTTGA

mRNA sequence

ATGGGGATTCGGTTGCTATCTTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTTACCAAAAACCAGTTGGACGTTCCAAAAGGTCATGTGGCTGTTTATGTAGGAGAGATCCAACGGAAGCGGTTCGTGGTTCCGATATCTTACCTAAACCATCCATCGTTCCAGAAACTGCTCAGCCACGCCGAGGAGGAGTTTGGCTTCCATCATCCACAAGGGGGCCTAACAATTCCTTGCAGAGAAGATGCCTTCGTTGATCTCACTTCTAGATTGCAAGTTTCTTGA

Coding sequence (CDS)

ATGGGGATTCGGTTGCTATCTTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTTACCAAAAACCAGTTGGACGTTCCAAAAGGTCATGTGGCTGTTTATGTAGGAGAGATCCAACGGAAGCGGTTCGTGGTTCCGATATCTTACCTAAACCATCCATCGTTCCAGAAACTGCTCAGCCACGCCGAGGAGGAGTTTGGCTTCCATCATCCACAAGGGGGCCTAACAATTCCTTGCAGAGAAGATGCCTTCGTTGATCTCACTTCTAGATTGCAAGTTTCTTGA

Homology

[Close]

BLAST of CmoCh02G003380.1 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-23
Identity = 48/66 (72.73%), Postives = 57/66 (86.36%), Query Frame = 1


Query: 30 PKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVD 89
          PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 90 LTSRLQ 96
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of CmoCh02G003380.1 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-23
Identity = 51/79 (64.56%), Postives = 60/79 (75.95%), Query Frame = 1


Query: 17 KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQG 76
          K+ S  T      PKG +AVYVGE Q+KR++VPISYLN PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCREDAFVDLTSRLQ 96
          GLTIPC ED F+++TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of CmoCh02G003380.1 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-23
Identity = 50/79 (63.29%), Postives = 61/79 (77.22%), Query Frame = 1


Query: 17 KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQG 76
          K+ S  T      PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +E+EFGF HP G
Sbjct: 12 KILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMG 71

Query: 77 GLTIPCREDAFVDLTSRLQ 96
          GLTIPC ED F+++TSRLQ
Sbjct: 72 GLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003380.1 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 8.6e-23
Identity = 51/84 (60.71%), Postives = 64/84 (76.19%), Query Frame = 1


Query: 12 AKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGF 71
          AK+IL   ++        PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTASA-----APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCREDAFVDLTSRLQ 96
           HP GGLTIPC ED F+++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 88

[Close]

BLAST of CmoCh02G003380.1 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-22
Identity = 50/79 (63.29%), Postives = 61/79 (77.22%), Query Frame = 1


Query: 17 KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQG 76
          K+ S  T      PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPMG 71

Query: 77 GLTIPCREDAFVDLTSRLQ 96
          GLTIPC ED F+++TSRLQ
Sbjct: 72 GLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003380.1 vs. TrEMBL
Match: A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.1e-44
Identity = 89/97 (91.75%), Postives = 93/97 (95.88%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MG RLLSLVPHAKQILKMQS FTKNQL+VPKGHVAVYVGEIQRKRFVVPISYLN PSFQ+
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LLSHAEEEFGFHHP GGLTIPC+EDAFVDLTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of CmoCh02G003380.1 vs. TrEMBL
Match: A0A0A0LLF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 3.1e-43
Identity = 85/97 (87.63%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQILK+QS  TKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSF++
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LL HAEEEFGFHHPQGGLTIPC+EDAF ++TS+LQ S
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]

BLAST of CmoCh02G003380.1 vs. TrEMBL
Match: A0A0A0LIZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-42
Identity = 83/97 (85.57%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVP+ KQILK+QS F K QLDVPKGHVA+YVGEIQRKRFVVPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LL+H+EEEFGFHHPQG LTIPC+EDAF+DLTSRLQ+S
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

[Close]

BLAST of CmoCh02G003380.1 vs. TrEMBL
Match: A0A0A0LJ99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.0e-42
Identity = 85/97 (87.63%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MG+ LL LVPHAK+ILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVP+SYLN PSFQ+
Sbjct: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LLS AEEEFGFHHP GGLTIPC+EDAFVDLTSRL+V+
Sbjct: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 97

[Close]

BLAST of CmoCh02G003380.1 vs. TrEMBL
Match: A0A0A0LJA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 2.4e-40
Identity = 84/97 (86.60%), Postives = 88/97 (90.72%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIR LSLVPH KQILKMQS  TK QL VPKGHVAVYVGEIQ KRFVVPISYLN  SFQ+
Sbjct: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LLS+AEEEFGFHHPQGGLTIPC+EDAFVDLTS+LQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 97

[Close]

BLAST of CmoCh02G003380.1 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 120.9 bits (302), Expect = 4.2e-28
Identity = 58/98 (59.18%), Postives = 74/98 (75.51%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEI-QRKRFVVPISYLNHPSFQ 60
          M IR+  ++  +KQ+LK   S + N + +PKGH+AVYVGE+ Q++RFVVP++YL+HP FQ
Sbjct: 1  MAIRISRVLQSSKQLLK-SLSHSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 KLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          KLL  AEEEFGF HP GGLTIPC E  F+DL SRL  S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of CmoCh02G003380.1 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 119.8 bits (299), Expect = 9.4e-28
Identity = 62/105 (59.05%), Postives = 77/105 (73.33%), Query Frame = 1


Query: 1   MGIRLLSLVPHAKQILKMQSSFTKNQLD------VPKGHVAVYVGE---IQRKRFVVPIS 60
           MG+   ++    KQILK+ S   +N+        VPKGHVAVYVGE   +++KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDL-TSRLQ 96
           +LNHPSF++ LS AEEEFGF+HP GGLTIPCRE+ F+DL  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of CmoCh02G003380.1 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 118.2 bits (295), Expect = 2.7e-27
Identity = 58/97 (59.79%), Postives = 72/97 (74.23%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILK----MQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHP 60
          M IR+  ++  +KQIL+    + SS + + LDVPKG++AVYVGE   KRFVVP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSR 94
          SFQ LL  AEEEFGF HP GGLTIPC E+ F+DL SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of CmoCh02G003380.1 vs. TAIR10
Match: AT4G34790.1 (AT4G34790.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.5 bits (280), Expect = 1.5e-25
Identity = 60/108 (55.56%), Postives = 76/108 (70.37%), Query Frame = 1


Query: 1   MGIRLLSLVPHAKQILKMQSSFTKNQLD-----------VPKGHVAVYVGE-IQRKRFVV 60
           MG+ + S++P+AKQI K QS   KN              VPKGHVAVYVGE +++KRFVV
Sbjct: 1   MGL-MRSMLPNAKQIFKSQSMRNKNGSSSPSTTTTTSGLVPKGHVAVYVGEQMEKKRFVV 60

Query: 61  PISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQV 97
           PISYLNHP F++ L+ AEEE GFHH  GGLTIPCRE++F+ L +  Q+
Sbjct: 61  PISYLNHPLFREFLNRAEEECGFHHSMGGLTIPCREESFLYLITSHQL 107

[Close]

BLAST of CmoCh02G003380.1 vs. TAIR10
Match: AT4G34800.1 (AT4G34800.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.3 bits (277), Expect = 3.4e-25
Identity = 63/92 (68.48%), Postives = 68/92 (73.91%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQ--RKRFVVPISYLNHPSF 60
          M IRL S V ++KQ  K QS        VPKGHVAVYVGE    +KRFVVPISYLNHPSF
Sbjct: 1  MAIRL-SRVINSKQSQKQQSR-------VPKGHVAVYVGEEMESKKRFVVPISYLNHPSF 60

Query: 61 QKLLSHAEEEFGFHHPQGGLTIPCREDAFVDL 91
          Q LLS AEEEFGF+HP GGLTIPCRE+ FV L
Sbjct: 61 QGLLSRAEEEFGFNHPIGGLTIPCREETFVGL 84

[Close]

BLAST of CmoCh02G003380.1 vs. NCBI nr
Match: gi|659115596|ref|XP_008457635.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 188.0 bits (476), Expect = 8.0e-45
Identity = 89/97 (91.75%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQ+LKMQS FTKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQLLKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LLS+AEEEFGFHHPQGGLTIPC+ED F+DLTSRLQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 97

[Close]

BLAST of CmoCh02G003380.1 vs. NCBI nr
Match: gi|700206757|gb|KGN61876.1| (hypothetical protein Csa_2G258720 [Cucumis sativus])

HSP 1 Score: 186.0 bits (471), Expect = 3.0e-44
Identity = 89/97 (91.75%), Postives = 93/97 (95.88%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MG RLLSLVPHAKQILKMQS FTKNQL+VPKGHVAVYVGEIQRKRFVVPISYLN PSFQ+
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LLSHAEEEFGFHHP GGLTIPC+EDAFVDLTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of CmoCh02G003380.1 vs. NCBI nr
Match: gi|778674175|ref|XP_011650154.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 182.2 bits (461), Expect = 4.4e-43
Identity = 85/97 (87.63%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQILK+QS  TKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSF++
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LL HAEEEFGFHHPQGGLTIPC+EDAF ++TS+LQ S
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]

BLAST of CmoCh02G003380.1 vs. NCBI nr
Match: gi|659115592|ref|XP_008457632.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 181.8 bits (460), Expect = 5.7e-43
Identity = 87/97 (89.69%), Postives = 93/97 (95.88%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQILKMQS FTKN+L+VPKGHVAVYVGEIQRKRFVVPISYLN PSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LL+ AEEEFGFHHP GGLTIPC+EDAFVDLTSRLQV+
Sbjct: 61 LLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of CmoCh02G003380.1 vs. NCBI nr
Match: gi|700206761|gb|KGN61880.1| (hypothetical protein Csa_2G258760 [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 1.7e-42
Identity = 83/97 (85.57%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVP+ KQILK+QS F K QLDVPKGHVA+YVGEIQRKRFVVPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LL+H+EEEFGFHHPQG LTIPC+EDAF+DLTSRLQ+S
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

The following BLAST results are available for this feature:

BLAST of CmoCh02G003380.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU24_ARATH	2.3e-23	72.73	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU20_ARATH	3.0e-23	64.56	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU22_ARATH	3.0e-23	63.29	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU21_ARATH	8.6e-23	60.71	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1	[more]
SAU19_ARATH	1.1e-22	63.29	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]

BLAST of CmoCh02G003380.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPI0_CUCSA	2.1e-44	91.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1	[more]
A0A0A0LLF1_CUCSA	3.1e-43	87.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1	[more]
A0A0A0LIZ9_CUCSA	1.2e-42	85.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1	[more]
A0A0A0LJ99_CUCSA	2.0e-42	87.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1	[more]
A0A0A0LJA3_CUCSA	2.4e-40	86.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1	[more]

BLAST of CmoCh02G003380.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21210.1	4.2e-28	59.18	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	9.4e-28	59.05	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	2.7e-27	59.79	SAUR-like auxin-responsive protein family	[more]
AT4G34790.1	1.5e-25	55.56	SAUR-like auxin-responsive protein family	[more]
AT4G34800.1	3.4e-25	68.48	SAUR-like auxin-responsive protein family	[more]

BLAST of CmoCh02G003380.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115596\|ref\|XP_008457635.1\|	8.0e-45	91.75	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|700206757\|gb\|KGN61876.1\|	3.0e-44	91.75	hypothetical protein Csa_2G258720 [Cucumis sativus]	[more]
gi\|778674175\|ref\|XP_011650154.1\|	4.4e-43	87.63	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115592\|ref\|XP_008457632.1\|	5.7e-43	89.69	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|700206761\|gb\|KGN61880.1\|	1.7e-42	85.57	hypothetical protein Csa_2G258760 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh02G003380	CmoCh02G003380	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh02G003380.1	CmoCh02G003380.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G003380.1.CDS.1	CmoCh02G003380.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G003380.1.exon.1	CmoCh02G003380.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..93 score: 7.5
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..97 score: 7.2
None	No IPR available	PANTHER	PTHR31929:SF13	SUBFAMILY NOT NAMED	coord: 2..97 score: 7.2