CmoCh01G017700.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G017700.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Activating transcription factor 7-interacting 1
Location	Cmo_Chr01 : 13104874 .. 13106949 (+)
Sequence length	1280

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCTCTATATAAGGTTTAAAATGAAAATTCCAATGGCCTTTGCGTTGCACGTTCATTATGTTTACAGGGCTTCTCTTGTTCGTATGCCCTCTACATATCTGGATGACCAAGCTTTGATTAGCTGTGCTCTAATTGCATCCGATCTTTTCTCCTATTATCATGACTCTGGGTGCTTGTTATCTGAAATCTGTTGGTGCATATCAGATACTTTCCTCAGGATGCTGCTGCAGTCAGTTTTGCCAACCACCTACTTATTGGTCAGTATTTCTTTCTTTCTTCAGTTTCGTTTACTATGCTTGTAGTATAATTATTTGAAGCAGTAGTACTTCTACTAGGAGATTGTTGCCTTTCCCTTATGAGATGTAGTTTTAGCTTCTGCAACTCTGTTATTATCCATCAAGATACACGGCCATGGTGGCTTAAGCTTGATCGGATACAACTTTGGAGTAATATTGCTTATTCACCTCCATGTGGTAAAGGGAATGTACCTTTGGTTTTACTGAACCGTTTCTTCTGCAGGGTTCTGCAGAGGAAGTTCTTCTGCGAGAAGTGTTATATGACGCTGCAATAATACCAGATTACCCATTCATTAAACTTCAATTTGGAACTGAACGACCTGCTTTGGATTTAAGAACTATTTGTTTGAATTGGCTATTTGTTGCTGAAAATGGCATTCGAACCTTCAGGTATAATAAATCATAGTTCTGGACGATACATTTCATGAAAGGTAGTAAAATTTAATAATGTGCACCGTCTGATTGGTGCAGAGAAACTGGTAATCTGAGAAAGGCTATGTCCTACATAAATGCCTTCCGCAATTCTTGTTGGCCCTCTCAGTTGATCAATTGGGTCAGAAACCAACCAGGCTTCAGTGAGAGGATGAGTCAACCAAACATCTCCACACCCACTGCTCTCATCGGTATGTTCTATACGTGTATACCGTACATTAACTTTGTTCATATAAGTTTCATGCACTTTGTGAGAAATCACAGACCTCCACAGTAGTACGAAATTGTCCACTTTGAGCATAAGCTCTTGTGGCTTTCTTTTTGGTCTTCCCAAAAGGTCCCATACCAATGGCAACGTATTTCTTACTTGTAAACTCATGATCATCCCTTTAATTAGTTGATGTGAGAGTCCTCTCCCAACCATCCTCAACACACTTCGATTGTGGTGAAGTTGACATTAGTGTAGAACACAGAACTATTATGTGTTGAACTTTCTTAAGGAATTGATTATAATCCATCTATACTATGAGTCATGTTTGTGTTTGCTGGACAACATTGAGACTTGGCTGGGCATTATCTGAATATATATGTGTGTGTTTGATGTTCACTTACTGACGGATGACGCTAAATTGATTTAACTTCAGAGTGGCTTCTGGTATTGGAAAATCAAGGGGTGAGAGTGTTCGACCATTTGAACTCCAAGTTCAGAGCCAGAGAAATCACTTGCAAATCAGGAGCCGAGTTTGTAGAAGCAGCAACAAAGGTTTCGGATGTCAGAAATGTGATGGATGAAGATGCCTCCGTTGGTGACTTTGACATGGTTGATTCAGTGGCTTTTGCAGCAGCACAGGGAACACCCATGACCTTGAATACAAACGGCATTGGAAATGGAAGAAAGAGGAAAGAATGCATGAATGACAACGGAGACACGAGGGTAAAGTTCCTCAGGAAACATCTCCACGACAATCCACTTAGGGAGAAATCTTTGCCATTAGTTTGATTTGGAACCCCCATCACTTCGAAGATGCTACTATATATATATATATATATATATATGTGGGCATCAGCTTAACACATATCTATGATACCATGGAGGAATTTTGATTTTGTGCCTGCTTTGTGTCACGGTCATGTTCGTCTAAGATGTGTTGACTCTGCAGCCAGCCTCTTGGCTTTTAACTTTTGTTAGGTAGCGATCCAGTCTTGAGATTTAAAGCTTCGAATCAATTGTTTTAGGCTTTTACATGTAGAGATTTGATGAGATGATGTTGAAGGCAAGGCCAGTAGGTTGTAAACGTTGAAAGATTTGCCATAATACACATGGTCCTGATGAACACTTTTGCT

mRNA sequence

ATGTCTCTCTATATAAGGTTTAAAATGAAAATTCCAATGGCCTTTGCGTTGCACGTTCATTATGTTTACAGGGCTTCTCTTGTTCGTATGCCCTCTACATATCTGGATGACCAAGCTTTGATTAGCTGTGCTCTAATTGCATCCGATCTTTTCTCCTATTATCATGACTCTGGGTGCTTGTTATCTGAAATCTGTTGGTGCATATCAGATACTTTCCTCAGGATGCTGCTGCAGTCAGTTTTGCCAACCACCTACTTATTGGGTTCTGCAGAGGAAGTTCTTCTGCGAGAAGTGTTATATGACGCTGCAATAATACCAGATTACCCATTCATTAAACTTCAATTTGGAACTGAACGACCTGCTTTGGATTTAAGAACTATTTGTTTGAATTGGCTATTTGTTGCTGAAAATGGCATTCGAACCTTCAGAGAAACTGGTAATCTGAGAAAGGCTATGTCCTACATAAATGCCTTCCGCAATTCTTGTTGGCCCTCTCAGTTGATCAATTGGGTCAGAAACCAACCAGGCTTCAGTGAGAGGATGAGTCAACCAAACATCTCCACACCCACTGCTCTCATCGAGTGGCTTCTGGTATTGGAAAATCAAGGGGTGAGAGTGTTCGACCATTTGAACTCCAAGTTCAGAGCCAGAGAAATCACTTGCAAATCAGGAGCCGAGTTTGTAGAAGCAGCAACAAAGGTTTCGGATGTCAGAAATGTGATGGATGAAGATGCCTCCGTTGGTGACTTTGACATGGTTGATTCAGTGGCTTTTGCAGCAGCACAGGGAACACCCATGACCTTGAATACAAACGGCATTGGAAATGGAAGAAAGAGGAAAGAATGCATGAATGACAACGGAGACACGAGGGTAAAGTTCCTCAGGAAACATCTCCACGACAATCCACTTAGGGAGAAATCTTTGCCATTAGTTTGATTTGGAACCCCCATCACTTCGAAGATGCTACTATATATATATATATATATATATATGTGGGCATCAGCTTAACACATATCTATGATACCATGGAGGAATTTTGATTTTGTGCCTGCTTTGTGTCACGGTCATGTTCGTCTAAGATGTGTTGACTCTGCAGCCAGCCTCTTGGCTTTTAACTTTTGTTAGGTAGCGATCCAGTCTTGAGATTTAAAGCTTCGAATCAATTGTTTTAGGCTTTTACATGTAGAGATTTGATGAGATGATGTTGAAGGCAAGGCCAGTAGGTTGTAAACGTTGAAAGATTTGCCATAATACACATGGTCCTGATGAACACTTTTGCT

Coding sequence (CDS)

ATGTCTCTCTATATAAGGTTTAAAATGAAAATTCCAATGGCCTTTGCGTTGCACGTTCATTATGTTTACAGGGCTTCTCTTGTTCGTATGCCCTCTACATATCTGGATGACCAAGCTTTGATTAGCTGTGCTCTAATTGCATCCGATCTTTTCTCCTATTATCATGACTCTGGGTGCTTGTTATCTGAAATCTGTTGGTGCATATCAGATACTTTCCTCAGGATGCTGCTGCAGTCAGTTTTGCCAACCACCTACTTATTGGGTTCTGCAGAGGAAGTTCTTCTGCGAGAAGTGTTATATGACGCTGCAATAATACCAGATTACCCATTCATTAAACTTCAATTTGGAACTGAACGACCTGCTTTGGATTTAAGAACTATTTGTTTGAATTGGCTATTTGTTGCTGAAAATGGCATTCGAACCTTCAGAGAAACTGGTAATCTGAGAAAGGCTATGTCCTACATAAATGCCTTCCGCAATTCTTGTTGGCCCTCTCAGTTGATCAATTGGGTCAGAAACCAACCAGGCTTCAGTGAGAGGATGAGTCAACCAAACATCTCCACACCCACTGCTCTCATCGAGTGGCTTCTGGTATTGGAAAATCAAGGGGTGAGAGTGTTCGACCATTTGAACTCCAAGTTCAGAGCCAGAGAAATCACTTGCAAATCAGGAGCCGAGTTTGTAGAAGCAGCAACAAAGGTTTCGGATGTCAGAAATGTGATGGATGAAGATGCCTCCGTTGGTGACTTTGACATGGTTGATTCAGTGGCTTTTGCAGCAGCACAGGGAACACCCATGACCTTGAATACAAACGGCATTGGAAATGGAAGAAAGAGGAAAGAATGCATGAATGACAACGGAGACACGAGGGTAAAGTTCCTCAGGAAACATCTCCACGACAATCCACTTAGGGAGAAATCTTTGCCATTAGTTTGA

Homology

[Close]

BLAST of CmoCh01G017700.1 vs. TrEMBL
Match: A0A0A0L0N4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G645970 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 4.2e-110
Identity = 205/253 (81.03%), Postives = 218/253 (86.17%), Query Frame = 1


Query: 70  DTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGTERPALDLRTICL 129
           D FLRMLLQSVLPTTYLLGSA+E+LLREVLYDAAIIP+YPF+KLQFGTERPA DLRTICL
Sbjct: 251 DIFLRMLLQSVLPTTYLLGSADEILLREVLYDAAIIPEYPFLKLQFGTERPAADLRTICL 310

Query: 130 NWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNISTP 189
           NWLFVA+NGIR+FR+TGNL KAMSYINAFRNSCWPSQLINW+RNQPGFSERMSQPNI TP
Sbjct: 311 NWLFVADNGIRSFRDTGNLSKAMSYINAFRNSCWPSQLINWIRNQPGFSERMSQPNICTP 370

Query: 190 TALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVSD-----------VR 249
           TALIEWLLVLE+QGVRVFDH NSK RARE  CKS AEFV+ A KVSD             
Sbjct: 371 TALIEWLLVLEDQGVRVFDHSNSKLRARETICKSEAEFVQPA-KVSDGMNLDVKFFNNAS 430

Query: 250 NVMDEDASVGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDNGDTRVKFLRKHL 309
           NVMDED SVGDFDMVDS+A AA Q T +TLN NGI NGRKRKECM D  D RVKFLR+HL
Sbjct: 431 NVMDEDPSVGDFDMVDSMATAAVQATSITLNGNGIENGRKRKECMTDKEDMRVKFLRQHL 490

Query: 310 HDNPLREKSLPLV 312
           HDNPLREKSLPLV
Sbjct: 491 HDNPLREKSLPLV 502

[Close]

BLAST of CmoCh01G017700.1 vs. TrEMBL
Match: A0A061GJ23_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_037271 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.1e-46
Identity = 107/251 (42.63%), Postives = 146/251 (58.17%), Query Frame = 1


Query: 70  DTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGTERPALDLRTICL 129
           D   RMLL+ VLP T LLG   E+LLRE+LYDA I  D+ F+  Q G   P   L+ + L
Sbjct: 253 DILFRMLLEPVLPITSLLGHGNEILLREILYDAVITMDHTFLSPQGGFLLPGKQLKELAL 312

Query: 130 NWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNISTP 189
            W FVA+N IR+ RE GN  KA++YINAF  SC PSQLINWV +Q G  ++    N+STP
Sbjct: 313 TWSFVADNAIRSVRENGNQTKAITYINAFSESCLPSQLINWVTSQTGMGDKARSLNVSTP 372

Query: 190 TALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVSD----------VRN 249
            ALI+WLL++E+QGVR+F+   SK  A+ + CKS  E+     K +           V  
Sbjct: 373 VALIKWLLIIEDQGVRIFECDISKVYAKAVLCKSRVEYEIPVVKTNGKILGENLVYMVHE 432

Query: 250 VMDEDASVGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDNGDTRVKFLRKHLH 309
             ++  + GD +M+DS+        P  + +    + RKRKE  N   +  VKF++ H H
Sbjct: 433 GREDKKADGDLEMIDSMD-TVPLTAPCLMTSTPTDSVRKRKEGSNVEEEIPVKFVKYHFH 492

Query: 310 DNPLREKSLPL 311
           +N +REK L L
Sbjct: 493 ENLVREKLLSL 502

[Close]

BLAST of CmoCh01G017700.1 vs. TrEMBL
Match: A0A061GK05_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_037271 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.8e-44
Identity = 106/251 (42.23%), Postives = 144/251 (57.37%), Query Frame = 1


Query: 70  DTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGTERPALDLRTICL 129
           D   RMLL+ VLP T LLG   E+LLRE+LYDA I  D+ F+  Q G   P   L+ + L
Sbjct: 253 DILFRMLLEPVLPITSLLGHGNEILLREILYDAVITMDHTFLSPQGGFLLPGKQLKELAL 312

Query: 130 NWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNISTP 189
            W FVA+N IR   E GN  KA++YINAF  SC PSQLINWV +Q G  ++    N+STP
Sbjct: 313 TWSFVADNAIR---ENGNQTKAITYINAFSESCLPSQLINWVTSQTGMGDKARSLNVSTP 372

Query: 190 TALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVSD----------VRN 249
            ALI+WLL++E+QGVR+F+   SK  A+ + CKS  E+     K +           V  
Sbjct: 373 VALIKWLLIIEDQGVRIFECDISKVYAKAVLCKSRVEYEIPVVKTNGKILGENLVYMVHE 432

Query: 250 VMDEDASVGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDNGDTRVKFLRKHLH 309
             ++  + GD +M+DS+        P  + +    + RKRKE  N   +  VKF++ H H
Sbjct: 433 GREDKKADGDLEMIDSMD-TVPLTAPCLMTSTPTDSVRKRKEGSNVEEEIPVKFVKYHFH 492

Query: 310 DNPLREKSLPL 311
           +N +REK L L
Sbjct: 493 ENLVREKLLSL 499

[Close]

BLAST of CmoCh01G017700.1 vs. TrEMBL
Match: A5AY35_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021599 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 4.4e-43
Identity = 107/263 (40.68%), Postives = 153/263 (58.17%), Query Frame = 1


Query: 58  GCLLSEICWCISDTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGT 117
           GC +  +   + +T LRMLL+ VLP T LL + +EVLLR+VLYDA I+  Y F+  Q G 
Sbjct: 193 GCGVGYLAGIVMNTLLRMLLEPVLPVTSLLSAEDEVLLRKVLYDAVIMEKYTFLNPQIGI 252

Query: 118 ERPALDLRTICLNWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGF 177
           +     L+ I + WLFVA+N I   RE G+  KA+SYINAF  S  PSQLI WV  Q G 
Sbjct: 253 QLFGNQLKNIVVTWLFVADNAILYVRENGDQAKAISYINAFSESQLPSQLIKWVATQSGM 312

Query: 178 SERMSQPNISTPTALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEF------VEAA 237
            E M +P  STP A ++WLL+ E+QG+RVFDH  S+  A+ +  KS  E+      ++  
Sbjct: 313 GEEMGRPKFSTPIAFMKWLLIAEDQGIRVFDHNISRLHAKAMMYKSRVEYELPVCKLDGK 372

Query: 238 TKVSDVRNVMDEDAS-----VGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDN 297
           T+ ++V    D + S      GD +M+DS+  AA      T+N     +GR++++ + D 
Sbjct: 373 TRDNNVFFYTDNEGSGEEKIDGDQEMIDSLN-AAMLAAACTVNLT--TDGRRKRKGIIDE 432

Query: 298 GDTRVKFLRKHLHDNPLREKSLP 310
           G T+ KF + HL +N   +  LP
Sbjct: 433 GKTQFKFGKYHLLENSFGDNHLP 452

[Close]

BLAST of CmoCh01G017700.1 vs. TrEMBL
Match: A0A0B0MF55_GOSAR (Activating transcription factor 7-interacting 1 OS=Gossypium arboreum GN=F383_19617 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 5.7e-43
Identity = 103/251 (41.04%), Postives = 143/251 (56.97%), Query Frame = 1


Query: 70  DTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGTERPALDLRTICL 129
           D FLRMLL+ VLP T  LG   EV+LRE LYDA I  D+ F+  + G   P   ++ + L
Sbjct: 116 DIFLRMLLEPVLPVTSPLGHGNEVILRETLYDAVIKMDHAFLGPEGGILLPGRQVKDLAL 175

Query: 130 NWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNISTP 189
            W FVA+N IR+ RE GN  KA+SYINAF  S   SQLI WV +Q G  ++ + PN+STP
Sbjct: 176 TWSFVADNAIRSVRENGNQTKAISYINAFSESWLLSQLIKWVTSQTGMVDKATSPNVSTP 235

Query: 190 TALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVSD----------VRN 249
            ALI+WLL++E+QGVR+F+   SK  A+ + CKS  E+     K+S           V  
Sbjct: 236 VALIKWLLIVEDQGVRIFECDISKVYAKAVLCKSRVEYEIPVDKISGKYSAENPACMVHE 295

Query: 250 VMDEDASVGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDNGDTRVKFLRKHLH 309
             ++  +  D +M+DS+         +  +T      RKRKE  N   +  VKF++ HL 
Sbjct: 296 RKEDKTADNDLEMIDSMDTVRLSAPCLMKSTAAADGVRKRKEGSNIEEEIPVKFIKYHLC 355

Query: 310 DNPLREKSLPL 311
           +N + +K L L
Sbjct: 356 ENSVTDKLLSL 366

[Close]

BLAST of CmoCh01G017700.1 vs. TAIR10
Match: AT5G11780.1 (AT5G11780.1 unknown protein)

HSP 1 Score: 104.4 bits (259), Expect = 1.3e-22
Identity = 80/242 (33.06%), Postives = 117/242 (48.35%), Query Frame = 1


Query: 70  DTFLRMLLQSVLPTTYLLGSA--EEVLLREVLYDAAIIP-DYPFIKLQFGTERPALDLRT 129
           D  L+MLL+  L  T L+G    +E  L E++ +A I   +  F+    GT + +L L+ 
Sbjct: 255 DVILKMLLEPYLHLTSLMGVVPEDEAFLTEIITEAVIKSVEKLFLNPGNGTSQRSLHLKN 314

Query: 130 ICLNWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNI 189
           I +NWLF+ +  + + R   +  K   Y N F NS  P  LINWV +Q            
Sbjct: 315 IAINWLFLFDKTMASLRRNKDQEKISMYTNMFSNSLIPYHLINWVISQGEVIRDADTLRN 374

Query: 190 STPTALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVSDVRNVMDEDAS 249
            TP + IEWL+ LE QG RVF+  +SK  A+ +  +S  + +   T +       D+D  
Sbjct: 375 LTPASFIEWLVSLEEQGPRVFNCDHSKNYAKSVIHRSRPD-LSIGTTLQKQEEEFDQDTD 434

Query: 250 VGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRK-ECMNDNGDTRVKFLRKHLHDNPLRE 308
           + D   V S++  +              N RKRK E  N  G+T+VK L KH H N L+E
Sbjct: 435 MADEQNVSSISILSR-------------NTRKRKEERHNKEGETKVK-LFKHRHSN-LQE 480

[Close]

BLAST of CmoCh01G017700.1 vs. NCBI nr
Match: gi|778696570|ref|XP_011654170.1| (PREDICTED: uncharacterized protein LOC101207241 [Cucumis sativus])

HSP 1 Score: 406.0 bits (1042), Expect = 6.0e-110
Identity = 205/253 (81.03%), Postives = 218/253 (86.17%), Query Frame = 1


Query: 70  DTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGTERPALDLRTICL 129
           D FLRMLLQSVLPTTYLLGSA+E+LLREVLYDAAIIP+YPF+KLQFGTERPA DLRTICL
Sbjct: 251 DIFLRMLLQSVLPTTYLLGSADEILLREVLYDAAIIPEYPFLKLQFGTERPAADLRTICL 310

Query: 130 NWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNISTP 189
           NWLFVA+NGIR+FR+TGNL KAMSYINAFRNSCWPSQLINW+RNQPGFSERMSQPNI TP
Sbjct: 311 NWLFVADNGIRSFRDTGNLSKAMSYINAFRNSCWPSQLINWIRNQPGFSERMSQPNICTP 370

Query: 190 TALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVSD-----------VR 249
           TALIEWLLVLE+QGVRVFDH NSK RARE  CKS AEFV+ A KVSD             
Sbjct: 371 TALIEWLLVLEDQGVRVFDHSNSKLRARETICKSEAEFVQPA-KVSDGMNLDVKFFNNAS 430

Query: 250 NVMDEDASVGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDNGDTRVKFLRKHL 309
           NVMDED SVGDFDMVDS+A AA Q T +TLN NGI NGRKRKECM D  D RVKFLR+HL
Sbjct: 431 NVMDEDPSVGDFDMVDSMATAAVQATSITLNGNGIENGRKRKECMTDKEDMRVKFLRQHL 490

Query: 310 HDNPLREKSLPLV 312
           HDNPLREKSLPLV
Sbjct: 491 HDNPLREKSLPLV 502

[Close]

BLAST of CmoCh01G017700.1 vs. NCBI nr
Match: gi|659103794|ref|XP_008452705.1| (PREDICTED: uncharacterized protein LOC103493648 [Cucumis melo])

HSP 1 Score: 405.2 bits (1040), Expect = 1.0e-109
Identity = 205/253 (81.03%), Postives = 224/253 (88.54%), Query Frame = 1


Query: 70  DTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGTERPALDLRTICL 129
           D FLRMLL SVLPTTYLLGSA+E+LLREVLYDAAIIP+YPF+KLQFGTERPA DLRTICL
Sbjct: 251 DIFLRMLLHSVLPTTYLLGSADEILLREVLYDAAIIPEYPFLKLQFGTERPAADLRTICL 310

Query: 130 NWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNISTP 189
           +WLFVA+NGIR+FR+TGNL KAMSYINAFRNSCWPSQLINW+RNQPGFSERMSQPNIS+P
Sbjct: 311 SWLFVADNGIRSFRDTGNLSKAMSYINAFRNSCWPSQLINWIRNQPGFSERMSQPNISSP 370

Query: 190 TALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVS-----DVR------ 249
           TALIEWLLVLE+QGVRVFDH NSK RAREI CKSGAEFV+AA KVS     DV+      
Sbjct: 371 TALIEWLLVLEDQGVRVFDHSNSKLRAREIICKSGAEFVQAA-KVSNGMNLDVKFFNNAS 430

Query: 250 NVMDEDASVGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDNGDTRVKFLRKHL 309
           N+MDED SVGDFDMVDS+A AA Q T +TLN NGI NGRKRKECM+D  D RVKFLR+HL
Sbjct: 431 NMMDEDPSVGDFDMVDSMATAAVQATSITLNGNGIENGRKRKECMDDKEDMRVKFLRQHL 490

Query: 310 HDNPLREKSLPLV 312
           HD+PLREKSLPLV
Sbjct: 491 HDSPLREKSLPLV 502

[Close]

BLAST of CmoCh01G017700.1 vs. NCBI nr
Match: gi|590573921|ref|XP_007012256.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 195.3 bits (495), Expect = 1.6e-46
Identity = 107/251 (42.63%), Postives = 146/251 (58.17%), Query Frame = 1


Query: 70  DTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGTERPALDLRTICL 129
           D   RMLL+ VLP T LLG   E+LLRE+LYDA I  D+ F+  Q G   P   L+ + L
Sbjct: 253 DILFRMLLEPVLPITSLLGHGNEILLREILYDAVITMDHTFLSPQGGFLLPGKQLKELAL 312

Query: 130 NWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNISTP 189
            W FVA+N IR+ RE GN  KA++YINAF  SC PSQLINWV +Q G  ++    N+STP
Sbjct: 313 TWSFVADNAIRSVRENGNQTKAITYINAFSESCLPSQLINWVTSQTGMGDKARSLNVSTP 372

Query: 190 TALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVSD----------VRN 249
            ALI+WLL++E+QGVR+F+   SK  A+ + CKS  E+     K +           V  
Sbjct: 373 VALIKWLLIIEDQGVRIFECDISKVYAKAVLCKSRVEYEIPVVKTNGKILGENLVYMVHE 432

Query: 250 VMDEDASVGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDNGDTRVKFLRKHLH 309
             ++  + GD +M+DS+        P  + +    + RKRKE  N   +  VKF++ H H
Sbjct: 433 GREDKKADGDLEMIDSMD-TVPLTAPCLMTSTPTDSVRKRKEGSNVEEEIPVKFVKYHFH 492

Query: 310 DNPLREKSLPL 311
           +N +REK L L
Sbjct: 493 ENLVREKLLSL 502

[Close]

BLAST of CmoCh01G017700.1 vs. NCBI nr
Match: gi|590573924|ref|XP_007012257.1| (Uncharacterized protein isoform 2 [Theobroma cacao])

HSP 1 Score: 188.0 bits (476), Expect = 2.6e-44
Identity = 106/251 (42.23%), Postives = 144/251 (57.37%), Query Frame = 1


Query: 70  DTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGTERPALDLRTICL 129
           D   RMLL+ VLP T LLG   E+LLRE+LYDA I  D+ F+  Q G   P   L+ + L
Sbjct: 253 DILFRMLLEPVLPITSLLGHGNEILLREILYDAVITMDHTFLSPQGGFLLPGKQLKELAL 312

Query: 130 NWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNISTP 189
            W FVA+N IR   E GN  KA++YINAF  SC PSQLINWV +Q G  ++    N+STP
Sbjct: 313 TWSFVADNAIR---ENGNQTKAITYINAFSESCLPSQLINWVTSQTGMGDKARSLNVSTP 372

Query: 190 TALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVSD----------VRN 249
            ALI+WLL++E+QGVR+F+   SK  A+ + CKS  E+     K +           V  
Sbjct: 373 VALIKWLLIIEDQGVRIFECDISKVYAKAVLCKSRVEYEIPVVKTNGKILGENLVYMVHE 432

Query: 250 VMDEDASVGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDNGDTRVKFLRKHLH 309
             ++  + GD +M+DS+        P  + +    + RKRKE  N   +  VKF++ H H
Sbjct: 433 GREDKKADGDLEMIDSMD-TVPLTAPCLMTSTPTDSVRKRKEGSNVEEEIPVKFVKYHFH 492

Query: 310 DNPLREKSLPL 311
           +N +REK L L
Sbjct: 493 ENLVREKLLSL 499

[Close]

BLAST of CmoCh01G017700.1 vs. NCBI nr
Match: gi|147818798|emb|CAN67286.1| (hypothetical protein VITISV_021599 [Vitis vinifera])

HSP 1 Score: 183.3 bits (464), Expect = 6.3e-43
Identity = 107/263 (40.68%), Postives = 153/263 (58.17%), Query Frame = 1


Query: 58  GCLLSEICWCISDTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGT 117
           GC +  +   + +T LRMLL+ VLP T LL + +EVLLR+VLYDA I+  Y F+  Q G 
Sbjct: 193 GCGVGYLAGIVMNTLLRMLLEPVLPVTSLLSAEDEVLLRKVLYDAVIMEKYTFLNPQIGI 252

Query: 118 ERPALDLRTICLNWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGF 177
           +     L+ I + WLFVA+N I   RE G+  KA+SYINAF  S  PSQLI WV  Q G 
Sbjct: 253 QLFGNQLKNIVVTWLFVADNAILYVRENGDQAKAISYINAFSESQLPSQLIKWVATQSGM 312

Query: 178 SERMSQPNISTPTALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEF------VEAA 237
            E M +P  STP A ++WLL+ E+QG+RVFDH  S+  A+ +  KS  E+      ++  
Sbjct: 313 GEEMGRPKFSTPIAFMKWLLIAEDQGIRVFDHNISRLHAKAMMYKSRVEYELPVCKLDGK 372

Query: 238 TKVSDVRNVMDEDAS-----VGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDN 297
           T+ ++V    D + S      GD +M+DS+  AA      T+N     +GR++++ + D 
Sbjct: 373 TRDNNVFFYTDNEGSGEEKIDGDQEMIDSLN-AAMLAAACTVNLT--TDGRRKRKGIIDE 432

Query: 298 GDTRVKFLRKHLHDNPLREKSLP 310
           G T+ KF + HL +N   +  LP
Sbjct: 433 GKTQFKFGKYHLLENSFGDNHLP 452

The following BLAST results are available for this feature:

BLAST of CmoCh01G017700.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh01G017700.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0N4_CUCSA	4.2e-110	81.03	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G645970 PE=4 SV=1	[more]
A0A061GJ23_THECC	1.1e-46	42.63	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_037271 PE=4 SV=1	[more]
A0A061GK05_THECC	1.8e-44	42.23	Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_037271 PE=4 SV=1	[more]
A5AY35_VITVI	4.4e-43	40.68	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021599 PE=4 SV=1	[more]
A0A0B0MF55_GOSAR	5.7e-43	41.04	Activating transcription factor 7-interacting 1 OS=Gossypium arboreum GN=F383_19...	[more]

BLAST of CmoCh01G017700.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G11780.1	1.3e-22	33.06	unknown protein	[more]

BLAST of CmoCh01G017700.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778696570\|ref\|XP_011654170.1\|	6.0e-110	81.03	PREDICTED: uncharacterized protein LOC101207241 [Cucumis sativus]	[more]
gi\|659103794\|ref\|XP_008452705.1\|	1.0e-109	81.03	PREDICTED: uncharacterized protein LOC103493648 [Cucumis melo]	[more]
gi\|590573921\|ref\|XP_007012256.1\|	1.6e-46	42.63	Uncharacterized protein isoform 1 [Theobroma cacao]	[more]
gi\|590573924\|ref\|XP_007012257.1\|	2.6e-44	42.23	Uncharacterized protein isoform 2 [Theobroma cacao]	[more]
gi\|147818798\|emb\|CAN67286.1\|	6.3e-43	40.68	hypothetical protein VITISV_021599 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh01G017700	CmoCh01G017700	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh01G017700.1	CmoCh01G017700.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh01G017700.1.exon.4	CmoCh01G017700.1.exon.4	exon
CmoCh01G017700.1.exon.3	CmoCh01G017700.1.exon.3	exon
CmoCh01G017700.1.exon.2	CmoCh01G017700.1.exon.2	exon
CmoCh01G017700.1.exon.1	CmoCh01G017700.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh01G017700.1.CDS.1	CmoCh01G017700.1.CDS.1	CDS
CmoCh01G017700.1.CDS.2	CmoCh01G017700.1.CDS.2	CDS
CmoCh01G017700.1.CDS.3	CmoCh01G017700.1.CDS.3	CDS
CmoCh01G017700.1.CDS.4	CmoCh01G017700.1.CDS.4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh01G017700.1.three_prime_UTR.1	CmoCh01G017700.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35505	FAMILY NOT NAMED	coord: 69..311 score: 5.8
None	No IPR available	PANTHER	PTHR35505:SF1	SUBFAMILY NOT NAMED	coord: 69..311 score: 5.8