CmoCh01G017700 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G017700
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Activating transcription factor 7-interacting 1
Location	Cmo_Chr01 : 13104874 .. 13106949 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCTCTATATAAGGTTTAAAATGAAAATTCCAATGGCCTTTGCGTTGCACGTTCATTATGTTTACAGGGCTTCTCTTGTTCGTATGCCCTCTACATATCTGGATGACCAAGCTTTGATTAGCTGTGCTCTAATTGCATCCGATCTTTTCTCCTATTATCATGACTCTGGGTGCTTGTTATCTGAAATCTGTTGGTGCATATCAGATACTTTCCTCAGGATGCTGCTGCAGTCAGTTTTGCCAACCACCTACTTATTGGTCAGTATTTCTTTCTTTCTTCAGTTTCGTTTACTATGCTTGTAGTATAATTATTTGAAGCAGTAGTACTTCTACTAGGAGATTGTTGCCTTTCCCTTATGAGATGTAGTTTTAGCTTCTGCAACTCTGTTATTATCCATCAAGATACACGGCCATGGTGGCTTAAGCTTGATCGGATACAACTTTGGAGTAATATTGCTTATTCACCTCCATGTGGTAAAGGGAATGTACCTTTGGTTTTACTGAACCGTTTCTTCTGCAGGGTTCTGCAGAGGAAGTTCTTCTGCGAGAAGTGTTATATGACGCTGCAATAATACCAGATTACCCATTCATTAAACTTCAATTTGGAACTGAACGACCTGCTTTGGATTTAAGAACTATTTGTTTGAATTGGCTATTTGTTGCTGAAAATGGCATTCGAACCTTCAGGTATAATAAATCATAGTTCTGGACGATACATTTCATGAAAGGTAGTAAAATTTAATAATGTGCACCGTCTGATTGGTGCAGAGAAACTGGTAATCTGAGAAAGGCTATGTCCTACATAAATGCCTTCCGCAATTCTTGTTGGCCCTCTCAGTTGATCAATTGGGTCAGAAACCAACCAGGCTTCAGTGAGAGGATGAGTCAACCAAACATCTCCACACCCACTGCTCTCATCGGTATGTTCTATACGTGTATACCGTACATTAACTTTGTTCATATAAGTTTCATGCACTTTGTGAGAAATCACAGACCTCCACAGTAGTACGAAATTGTCCACTTTGAGCATAAGCTCTTGTGGCTTTCTTTTTGGTCTTCCCAAAAGGTCCCATACCAATGGCAACGTATTTCTTACTTGTAAACTCATGATCATCCCTTTAATTAGTTGATGTGAGAGTCCTCTCCCAACCATCCTCAACACACTTCGATTGTGGTGAAGTTGACATTAGTGTAGAACACAGAACTATTATGTGTTGAACTTTCTTAAGGAATTGATTATAATCCATCTATACTATGAGTCATGTTTGTGTTTGCTGGACAACATTGAGACTTGGCTGGGCATTATCTGAATATATATGTGTGTGTTTGATGTTCACTTACTGACGGATGACGCTAAATTGATTTAACTTCAGAGTGGCTTCTGGTATTGGAAAATCAAGGGGTGAGAGTGTTCGACCATTTGAACTCCAAGTTCAGAGCCAGAGAAATCACTTGCAAATCAGGAGCCGAGTTTGTAGAAGCAGCAACAAAGGTTTCGGATGTCAGAAATGTGATGGATGAAGATGCCTCCGTTGGTGACTTTGACATGGTTGATTCAGTGGCTTTTGCAGCAGCACAGGGAACACCCATGACCTTGAATACAAACGGCATTGGAAATGGAAGAAAGAGGAAAGAATGCATGAATGACAACGGAGACACGAGGGTAAAGTTCCTCAGGAAACATCTCCACGACAATCCACTTAGGGAGAAATCTTTGCCATTAGTTTGATTTGGAACCCCCATCACTTCGAAGATGCTACTATATATATATATATATATATATATGTGGGCATCAGCTTAACACATATCTATGATACCATGGAGGAATTTTGATTTTGTGCCTGCTTTGTGTCACGGTCATGTTCGTCTAAGATGTGTTGACTCTGCAGCCAGCCTCTTGGCTTTTAACTTTTGTTAGGTAGCGATCCAGTCTTGAGATTTAAAGCTTCGAATCAATTGTTTTAGGCTTTTACATGTAGAGATTTGATGAGATGATGTTGAAGGCAAGGCCAGTAGGTTGTAAACGTTGAAAGATTTGCCATAATACACATGGTCCTGATGAACACTTTTGCT

mRNA sequence

ATGTCTCTCTATATAAGGTTTAAAATGAAAATTCCAATGGCCTTTGCGTTGCACGTTCATTATGTTTACAGGGCTTCTCTTGTTCGTATGCCCTCTACATATCTGGATGACCAAGCTTTGATTAGCTGTGCTCTAATTGCATCCGATCTTTTCTCCTATTATCATGACTCTGGGTGCTTGTTATCTGAAATCTGTTGGTGCATATCAGATACTTTCCTCAGGATGCTGCTGCAGTCAGTTTTGCCAACCACCTACTTATTGGGTTCTGCAGAGGAAGTTCTTCTGCGAGAAGTGTTATATGACGCTGCAATAATACCAGATTACCCATTCATTAAACTTCAATTTGGAACTGAACGACCTGCTTTGGATTTAAGAACTATTTGTTTGAATTGGCTATTTGTTGCTGAAAATGGCATTCGAACCTTCAGAGAAACTGGTAATCTGAGAAAGGCTATGTCCTACATAAATGCCTTCCGCAATTCTTGTTGGCCCTCTCAGTTGATCAATTGGGTCAGAAACCAACCAGGCTTCAGTGAGAGGATGAGTCAACCAAACATCTCCACACCCACTGCTCTCATCGAGTGGCTTCTGGTATTGGAAAATCAAGGGGTGAGAGTGTTCGACCATTTGAACTCCAAGTTCAGAGCCAGAGAAATCACTTGCAAATCAGGAGCCGAGTTTGTAGAAGCAGCAACAAAGGTTTCGGATGTCAGAAATGTGATGGATGAAGATGCCTCCGTTGGTGACTTTGACATGGTTGATTCAGTGGCTTTTGCAGCAGCACAGGGAACACCCATGACCTTGAATACAAACGGCATTGGAAATGGAAGAAAGAGGAAAGAATGCATGAATGACAACGGAGACACGAGGGTAAAGTTCCTCAGGAAACATCTCCACGACAATCCACTTAGGGAGAAATCTTTGCCATTAGTTTGATTTGGAACCCCCATCACTTCGAAGATGCTACTATATATATATATATATATATATATGTGGGCATCAGCTTAACACATATCTATGATACCATGGAGGAATTTTGATTTTGTGCCTGCTTTGTGTCACGGTCATGTTCGTCTAAGATGTGTTGACTCTGCAGCCAGCCTCTTGGCTTTTAACTTTTGTTAGGTAGCGATCCAGTCTTGAGATTTAAAGCTTCGAATCAATTGTTTTAGGCTTTTACATGTAGAGATTTGATGAGATGATGTTGAAGGCAAGGCCAGTAGGTTGTAAACGTTGAAAGATTTGCCATAATACACATGGTCCTGATGAACACTTTTGCT

Coding sequence (CDS)

ATGTCTCTCTATATAAGGTTTAAAATGAAAATTCCAATGGCCTTTGCGTTGCACGTTCATTATGTTTACAGGGCTTCTCTTGTTCGTATGCCCTCTACATATCTGGATGACCAAGCTTTGATTAGCTGTGCTCTAATTGCATCCGATCTTTTCTCCTATTATCATGACTCTGGGTGCTTGTTATCTGAAATCTGTTGGTGCATATCAGATACTTTCCTCAGGATGCTGCTGCAGTCAGTTTTGCCAACCACCTACTTATTGGGTTCTGCAGAGGAAGTTCTTCTGCGAGAAGTGTTATATGACGCTGCAATAATACCAGATTACCCATTCATTAAACTTCAATTTGGAACTGAACGACCTGCTTTGGATTTAAGAACTATTTGTTTGAATTGGCTATTTGTTGCTGAAAATGGCATTCGAACCTTCAGAGAAACTGGTAATCTGAGAAAGGCTATGTCCTACATAAATGCCTTCCGCAATTCTTGTTGGCCCTCTCAGTTGATCAATTGGGTCAGAAACCAACCAGGCTTCAGTGAGAGGATGAGTCAACCAAACATCTCCACACCCACTGCTCTCATCGAGTGGCTTCTGGTATTGGAAAATCAAGGGGTGAGAGTGTTCGACCATTTGAACTCCAAGTTCAGAGCCAGAGAAATCACTTGCAAATCAGGAGCCGAGTTTGTAGAAGCAGCAACAAAGGTTTCGGATGTCAGAAATGTGATGGATGAAGATGCCTCCGTTGGTGACTTTGACATGGTTGATTCAGTGGCTTTTGCAGCAGCACAGGGAACACCCATGACCTTGAATACAAACGGCATTGGAAATGGAAGAAAGAGGAAAGAATGCATGAATGACAACGGAGACACGAGGGTAAAGTTCCTCAGGAAACATCTCCACGACAATCCACTTAGGGAGAAATCTTTGCCATTAGTTTGA

Homology

[Close]

BLAST of CmoCh01G017700 vs. TrEMBL
Match: A0A0A0L0N4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G645970 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 4.2e-110
Identity = 205/253 (81.03%), Postives = 218/253 (86.17%), Query Frame = 1


Query: 70  DTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGTERPALDLRTICL 129
           D FLRMLLQSVLPTTYLLGSA+E+LLREVLYDAAIIP+YPF+KLQFGTERPA DLRTICL
Sbjct: 251 DIFLRMLLQSVLPTTYLLGSADEILLREVLYDAAIIPEYPFLKLQFGTERPAADLRTICL 310

Query: 130 NWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNISTP 189
           NWLFVA+NGIR+FR+TGNL KAMSYINAFRNSCWPSQLINW+RNQPGFSERMSQPNI TP
Sbjct: 311 NWLFVADNGIRSFRDTGNLSKAMSYINAFRNSCWPSQLINWIRNQPGFSERMSQPNICTP 370

Query: 190 TALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVSD-----------VR 249
           TALIEWLLVLE+QGVRVFDH NSK RARE  CKS AEFV+ A KVSD             
Sbjct: 371 TALIEWLLVLEDQGVRVFDHSNSKLRARETICKSEAEFVQPA-KVSDGMNLDVKFFNNAS 430

Query: 250 NVMDEDASVGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDNGDTRVKFLRKHL 309
           NVMDED SVGDFDMVDS+A AA Q T +TLN NGI NGRKRKECM D  D RVKFLR+HL
Sbjct: 431 NVMDEDPSVGDFDMVDSMATAAVQATSITLNGNGIENGRKRKECMTDKEDMRVKFLRQHL 490

Query: 310 HDNPLREKSLPLV 312
           HDNPLREKSLPLV
Sbjct: 491 HDNPLREKSLPLV 502

[Close]

BLAST of CmoCh01G017700 vs. TrEMBL
Match: A0A061GJ23_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_037271 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.1e-46
Identity = 107/251 (42.63%), Postives = 146/251 (58.17%), Query Frame = 1


Query: 70  DTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGTERPALDLRTICL 129
           D   RMLL+ VLP T LLG   E+LLRE+LYDA I  D+ F+  Q G   P   L+ + L
Sbjct: 253 DILFRMLLEPVLPITSLLGHGNEILLREILYDAVITMDHTFLSPQGGFLLPGKQLKELAL 312

Query: 130 NWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNISTP 189
            W FVA+N IR+ RE GN  KA++YINAF  SC PSQLINWV +Q G  ++    N+STP
Sbjct: 313 TWSFVADNAIRSVRENGNQTKAITYINAFSESCLPSQLINWVTSQTGMGDKARSLNVSTP 372

Query: 190 TALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVSD----------VRN 249
            ALI+WLL++E+QGVR+F+   SK  A+ + CKS  E+     K +           V  
Sbjct: 373 VALIKWLLIIEDQGVRIFECDISKVYAKAVLCKSRVEYEIPVVKTNGKILGENLVYMVHE 432

Query: 250 VMDEDASVGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDNGDTRVKFLRKHLH 309
             ++  + GD +M+DS+        P  + +    + RKRKE  N   +  VKF++ H H
Sbjct: 433 GREDKKADGDLEMIDSMD-TVPLTAPCLMTSTPTDSVRKRKEGSNVEEEIPVKFVKYHFH 492

Query: 310 DNPLREKSLPL 311
           +N +REK L L
Sbjct: 493 ENLVREKLLSL 502

[Close]

BLAST of CmoCh01G017700 vs. TrEMBL
Match: A0A061GK05_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_037271 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.8e-44
Identity = 106/251 (42.23%), Postives = 144/251 (57.37%), Query Frame = 1


Query: 70  DTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGTERPALDLRTICL 129
           D   RMLL+ VLP T LLG   E+LLRE+LYDA I  D+ F+  Q G   P   L+ + L
Sbjct: 253 DILFRMLLEPVLPITSLLGHGNEILLREILYDAVITMDHTFLSPQGGFLLPGKQLKELAL 312

Query: 130 NWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNISTP 189
            W FVA+N IR   E GN  KA++YINAF  SC PSQLINWV +Q G  ++    N+STP
Sbjct: 313 TWSFVADNAIR---ENGNQTKAITYINAFSESCLPSQLINWVTSQTGMGDKARSLNVSTP 372

Query: 190 TALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVSD----------VRN 249
            ALI+WLL++E+QGVR+F+   SK  A+ + CKS  E+     K +           V  
Sbjct: 373 VALIKWLLIIEDQGVRIFECDISKVYAKAVLCKSRVEYEIPVVKTNGKILGENLVYMVHE 432

Query: 250 VMDEDASVGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDNGDTRVKFLRKHLH 309
             ++  + GD +M+DS+        P  + +    + RKRKE  N   +  VKF++ H H
Sbjct: 433 GREDKKADGDLEMIDSMD-TVPLTAPCLMTSTPTDSVRKRKEGSNVEEEIPVKFVKYHFH 492

Query: 310 DNPLREKSLPL 311
           +N +REK L L
Sbjct: 493 ENLVREKLLSL 499

[Close]

BLAST of CmoCh01G017700 vs. TrEMBL
Match: A5AY35_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021599 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 4.4e-43
Identity = 107/263 (40.68%), Postives = 153/263 (58.17%), Query Frame = 1


Query: 58  GCLLSEICWCISDTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGT 117
           GC +  +   + +T LRMLL+ VLP T LL + +EVLLR+VLYDA I+  Y F+  Q G 
Sbjct: 193 GCGVGYLAGIVMNTLLRMLLEPVLPVTSLLSAEDEVLLRKVLYDAVIMEKYTFLNPQIGI 252

Query: 118 ERPALDLRTICLNWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGF 177
           +     L+ I + WLFVA+N I   RE G+  KA+SYINAF  S  PSQLI WV  Q G 
Sbjct: 253 QLFGNQLKNIVVTWLFVADNAILYVRENGDQAKAISYINAFSESQLPSQLIKWVATQSGM 312

Query: 178 SERMSQPNISTPTALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEF------VEAA 237
            E M +P  STP A ++WLL+ E+QG+RVFDH  S+  A+ +  KS  E+      ++  
Sbjct: 313 GEEMGRPKFSTPIAFMKWLLIAEDQGIRVFDHNISRLHAKAMMYKSRVEYELPVCKLDGK 372

Query: 238 TKVSDVRNVMDEDAS-----VGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDN 297
           T+ ++V    D + S      GD +M+DS+  AA      T+N     +GR++++ + D 
Sbjct: 373 TRDNNVFFYTDNEGSGEEKIDGDQEMIDSLN-AAMLAAACTVNLT--TDGRRKRKGIIDE 432

Query: 298 GDTRVKFLRKHLHDNPLREKSLP 310
           G T+ KF + HL +N   +  LP
Sbjct: 433 GKTQFKFGKYHLLENSFGDNHLP 452

[Close]

BLAST of CmoCh01G017700 vs. TrEMBL
Match: A0A0B0MF55_GOSAR (Activating transcription factor 7-interacting 1 OS=Gossypium arboreum GN=F383_19617 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 5.7e-43
Identity = 103/251 (41.04%), Postives = 143/251 (56.97%), Query Frame = 1


Query: 70  DTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGTERPALDLRTICL 129
           D FLRMLL+ VLP T  LG   EV+LRE LYDA I  D+ F+  + G   P   ++ + L
Sbjct: 116 DIFLRMLLEPVLPVTSPLGHGNEVILRETLYDAVIKMDHAFLGPEGGILLPGRQVKDLAL 175

Query: 130 NWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNISTP 189
            W FVA+N IR+ RE GN  KA+SYINAF  S   SQLI WV +Q G  ++ + PN+STP
Sbjct: 176 TWSFVADNAIRSVRENGNQTKAISYINAFSESWLLSQLIKWVTSQTGMVDKATSPNVSTP 235

Query: 190 TALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVSD----------VRN 249
            ALI+WLL++E+QGVR+F+   SK  A+ + CKS  E+     K+S           V  
Sbjct: 236 VALIKWLLIVEDQGVRIFECDISKVYAKAVLCKSRVEYEIPVDKISGKYSAENPACMVHE 295

Query: 250 VMDEDASVGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDNGDTRVKFLRKHLH 309
             ++  +  D +M+DS+         +  +T      RKRKE  N   +  VKF++ HL 
Sbjct: 296 RKEDKTADNDLEMIDSMDTVRLSAPCLMKSTAAADGVRKRKEGSNIEEEIPVKFIKYHLC 355

Query: 310 DNPLREKSLPL 311
           +N + +K L L
Sbjct: 356 ENSVTDKLLSL 366

[Close]

BLAST of CmoCh01G017700 vs. TAIR10
Match: AT5G11780.1 (AT5G11780.1 unknown protein)

HSP 1 Score: 104.4 bits (259), Expect = 1.3e-22
Identity = 80/242 (33.06%), Postives = 117/242 (48.35%), Query Frame = 1


Query: 70  DTFLRMLLQSVLPTTYLLGSA--EEVLLREVLYDAAIIP-DYPFIKLQFGTERPALDLRT 129
           D  L+MLL+  L  T L+G    +E  L E++ +A I   +  F+    GT + +L L+ 
Sbjct: 255 DVILKMLLEPYLHLTSLMGVVPEDEAFLTEIITEAVIKSVEKLFLNPGNGTSQRSLHLKN 314

Query: 130 ICLNWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNI 189
           I +NWLF+ +  + + R   +  K   Y N F NS  P  LINWV +Q            
Sbjct: 315 IAINWLFLFDKTMASLRRNKDQEKISMYTNMFSNSLIPYHLINWVISQGEVIRDADTLRN 374

Query: 190 STPTALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVSDVRNVMDEDAS 249
            TP + IEWL+ LE QG RVF+  +SK  A+ +  +S  + +   T +       D+D  
Sbjct: 375 LTPASFIEWLVSLEEQGPRVFNCDHSKNYAKSVIHRSRPD-LSIGTTLQKQEEEFDQDTD 434

Query: 250 VGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRK-ECMNDNGDTRVKFLRKHLHDNPLRE 308
           + D   V S++  +              N RKRK E  N  G+T+VK L KH H N L+E
Sbjct: 435 MADEQNVSSISILSR-------------NTRKRKEERHNKEGETKVK-LFKHRHSN-LQE 480

[Close]

BLAST of CmoCh01G017700 vs. NCBI nr
Match: gi|778696570|ref|XP_011654170.1| (PREDICTED: uncharacterized protein LOC101207241 [Cucumis sativus])

HSP 1 Score: 406.0 bits (1042), Expect = 6.0e-110
Identity = 205/253 (81.03%), Postives = 218/253 (86.17%), Query Frame = 1


Query: 70  DTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGTERPALDLRTICL 129
           D FLRMLLQSVLPTTYLLGSA+E+LLREVLYDAAIIP+YPF+KLQFGTERPA DLRTICL
Sbjct: 251 DIFLRMLLQSVLPTTYLLGSADEILLREVLYDAAIIPEYPFLKLQFGTERPAADLRTICL 310

Query: 130 NWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNISTP 189
           NWLFVA+NGIR+FR+TGNL KAMSYINAFRNSCWPSQLINW+RNQPGFSERMSQPNI TP
Sbjct: 311 NWLFVADNGIRSFRDTGNLSKAMSYINAFRNSCWPSQLINWIRNQPGFSERMSQPNICTP 370

Query: 190 TALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVSD-----------VR 249
           TALIEWLLVLE+QGVRVFDH NSK RARE  CKS AEFV+ A KVSD             
Sbjct: 371 TALIEWLLVLEDQGVRVFDHSNSKLRARETICKSEAEFVQPA-KVSDGMNLDVKFFNNAS 430

Query: 250 NVMDEDASVGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDNGDTRVKFLRKHL 309
           NVMDED SVGDFDMVDS+A AA Q T +TLN NGI NGRKRKECM D  D RVKFLR+HL
Sbjct: 431 NVMDEDPSVGDFDMVDSMATAAVQATSITLNGNGIENGRKRKECMTDKEDMRVKFLRQHL 490

Query: 310 HDNPLREKSLPLV 312
           HDNPLREKSLPLV
Sbjct: 491 HDNPLREKSLPLV 502

[Close]

BLAST of CmoCh01G017700 vs. NCBI nr
Match: gi|659103794|ref|XP_008452705.1| (PREDICTED: uncharacterized protein LOC103493648 [Cucumis melo])

HSP 1 Score: 405.2 bits (1040), Expect = 1.0e-109
Identity = 205/253 (81.03%), Postives = 224/253 (88.54%), Query Frame = 1


Query: 70  DTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGTERPALDLRTICL 129
           D FLRMLL SVLPTTYLLGSA+E+LLREVLYDAAIIP+YPF+KLQFGTERPA DLRTICL
Sbjct: 251 DIFLRMLLHSVLPTTYLLGSADEILLREVLYDAAIIPEYPFLKLQFGTERPAADLRTICL 310

Query: 130 NWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNISTP 189
           +WLFVA+NGIR+FR+TGNL KAMSYINAFRNSCWPSQLINW+RNQPGFSERMSQPNIS+P
Sbjct: 311 SWLFVADNGIRSFRDTGNLSKAMSYINAFRNSCWPSQLINWIRNQPGFSERMSQPNISSP 370

Query: 190 TALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVS-----DVR------ 249
           TALIEWLLVLE+QGVRVFDH NSK RAREI CKSGAEFV+AA KVS     DV+      
Sbjct: 371 TALIEWLLVLEDQGVRVFDHSNSKLRAREIICKSGAEFVQAA-KVSNGMNLDVKFFNNAS 430

Query: 250 NVMDEDASVGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDNGDTRVKFLRKHL 309
           N+MDED SVGDFDMVDS+A AA Q T +TLN NGI NGRKRKECM+D  D RVKFLR+HL
Sbjct: 431 NMMDEDPSVGDFDMVDSMATAAVQATSITLNGNGIENGRKRKECMDDKEDMRVKFLRQHL 490

Query: 310 HDNPLREKSLPLV 312
           HD+PLREKSLPLV
Sbjct: 491 HDSPLREKSLPLV 502

[Close]

BLAST of CmoCh01G017700 vs. NCBI nr
Match: gi|590573921|ref|XP_007012256.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 195.3 bits (495), Expect = 1.6e-46
Identity = 107/251 (42.63%), Postives = 146/251 (58.17%), Query Frame = 1


Query: 70  DTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGTERPALDLRTICL 129
           D   RMLL+ VLP T LLG   E+LLRE+LYDA I  D+ F+  Q G   P   L+ + L
Sbjct: 253 DILFRMLLEPVLPITSLLGHGNEILLREILYDAVITMDHTFLSPQGGFLLPGKQLKELAL 312

Query: 130 NWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNISTP 189
            W FVA+N IR+ RE GN  KA++YINAF  SC PSQLINWV +Q G  ++    N+STP
Sbjct: 313 TWSFVADNAIRSVRENGNQTKAITYINAFSESCLPSQLINWVTSQTGMGDKARSLNVSTP 372

Query: 190 TALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVSD----------VRN 249
            ALI+WLL++E+QGVR+F+   SK  A+ + CKS  E+     K +           V  
Sbjct: 373 VALIKWLLIIEDQGVRIFECDISKVYAKAVLCKSRVEYEIPVVKTNGKILGENLVYMVHE 432

Query: 250 VMDEDASVGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDNGDTRVKFLRKHLH 309
             ++  + GD +M+DS+        P  + +    + RKRKE  N   +  VKF++ H H
Sbjct: 433 GREDKKADGDLEMIDSMD-TVPLTAPCLMTSTPTDSVRKRKEGSNVEEEIPVKFVKYHFH 492

Query: 310 DNPLREKSLPL 311
           +N +REK L L
Sbjct: 493 ENLVREKLLSL 502

[Close]

BLAST of CmoCh01G017700 vs. NCBI nr
Match: gi|590573924|ref|XP_007012257.1| (Uncharacterized protein isoform 2 [Theobroma cacao])

HSP 1 Score: 188.0 bits (476), Expect = 2.6e-44
Identity = 106/251 (42.23%), Postives = 144/251 (57.37%), Query Frame = 1


Query: 70  DTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGTERPALDLRTICL 129
           D   RMLL+ VLP T LLG   E+LLRE+LYDA I  D+ F+  Q G   P   L+ + L
Sbjct: 253 DILFRMLLEPVLPITSLLGHGNEILLREILYDAVITMDHTFLSPQGGFLLPGKQLKELAL 312

Query: 130 NWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNISTP 189
            W FVA+N IR   E GN  KA++YINAF  SC PSQLINWV +Q G  ++    N+STP
Sbjct: 313 TWSFVADNAIR---ENGNQTKAITYINAFSESCLPSQLINWVTSQTGMGDKARSLNVSTP 372

Query: 190 TALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVSD----------VRN 249
            ALI+WLL++E+QGVR+F+   SK  A+ + CKS  E+     K +           V  
Sbjct: 373 VALIKWLLIIEDQGVRIFECDISKVYAKAVLCKSRVEYEIPVVKTNGKILGENLVYMVHE 432

Query: 250 VMDEDASVGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDNGDTRVKFLRKHLH 309
             ++  + GD +M+DS+        P  + +    + RKRKE  N   +  VKF++ H H
Sbjct: 433 GREDKKADGDLEMIDSMD-TVPLTAPCLMTSTPTDSVRKRKEGSNVEEEIPVKFVKYHFH 492

Query: 310 DNPLREKSLPL 311
           +N +REK L L
Sbjct: 493 ENLVREKLLSL 499

[Close]

BLAST of CmoCh01G017700 vs. NCBI nr
Match: gi|147818798|emb|CAN67286.1| (hypothetical protein VITISV_021599 [Vitis vinifera])

HSP 1 Score: 183.3 bits (464), Expect = 6.3e-43
Identity = 107/263 (40.68%), Postives = 153/263 (58.17%), Query Frame = 1


Query: 58  GCLLSEICWCISDTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGT 117
           GC +  +   + +T LRMLL+ VLP T LL + +EVLLR+VLYDA I+  Y F+  Q G 
Sbjct: 193 GCGVGYLAGIVMNTLLRMLLEPVLPVTSLLSAEDEVLLRKVLYDAVIMEKYTFLNPQIGI 252

Query: 118 ERPALDLRTICLNWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGF 177
           +     L+ I + WLFVA+N I   RE G+  KA+SYINAF  S  PSQLI WV  Q G 
Sbjct: 253 QLFGNQLKNIVVTWLFVADNAILYVRENGDQAKAISYINAFSESQLPSQLIKWVATQSGM 312

Query: 178 SERMSQPNISTPTALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEF------VEAA 237
            E M +P  STP A ++WLL+ E+QG+RVFDH  S+  A+ +  KS  E+      ++  
Sbjct: 313 GEEMGRPKFSTPIAFMKWLLIAEDQGIRVFDHNISRLHAKAMMYKSRVEYELPVCKLDGK 372

Query: 238 TKVSDVRNVMDEDAS-----VGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDN 297
           T+ ++V    D + S      GD +M+DS+  AA      T+N     +GR++++ + D 
Sbjct: 373 TRDNNVFFYTDNEGSGEEKIDGDQEMIDSLN-AAMLAAACTVNLT--TDGRRKRKGIIDE 432

Query: 298 GDTRVKFLRKHLHDNPLREKSLP 310
           G T+ KF + HL +N   +  LP
Sbjct: 433 GKTQFKFGKYHLLENSFGDNHLP 452

The following BLAST results are available for this feature:

BLAST of CmoCh01G017700 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh01G017700 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0N4_CUCSA	4.2e-110	81.03	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G645970 PE=4 SV=1	[more]
A0A061GJ23_THECC	1.1e-46	42.63	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_037271 PE=4 SV=1	[more]
A0A061GK05_THECC	1.8e-44	42.23	Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_037271 PE=4 SV=1	[more]
A5AY35_VITVI	4.4e-43	40.68	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021599 PE=4 SV=1	[more]
A0A0B0MF55_GOSAR	5.7e-43	41.04	Activating transcription factor 7-interacting 1 OS=Gossypium arboreum GN=F383_19...	[more]

BLAST of CmoCh01G017700 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G11780.1	1.3e-22	33.06	unknown protein	[more]

BLAST of CmoCh01G017700 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778696570\|ref\|XP_011654170.1\|	6.0e-110	81.03	PREDICTED: uncharacterized protein LOC101207241 [Cucumis sativus]	[more]
gi\|659103794\|ref\|XP_008452705.1\|	1.0e-109	81.03	PREDICTED: uncharacterized protein LOC103493648 [Cucumis melo]	[more]
gi\|590573921\|ref\|XP_007012256.1\|	1.6e-46	42.63	Uncharacterized protein isoform 1 [Theobroma cacao]	[more]
gi\|590573924\|ref\|XP_007012257.1\|	2.6e-44	42.23	Uncharacterized protein isoform 2 [Theobroma cacao]	[more]
gi\|147818798\|emb\|CAN67286.1\|	6.3e-43	40.68	hypothetical protein VITISV_021599 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G017700.1	CmoCh01G017700.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35505	FAMILY NOT NAMED	coord: 69..311 score: 5.8
None	No IPR available	PANTHER	PTHR35505:SF1	SUBFAMILY NOT NAMED	coord: 69..311 score: 5.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G017700	MELO3C016863	Melon (DHL92) v3.5.1	cmomeB435

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G017700	Melon (DHL92) v3.6.1	cmomedB455
CmoCh01G017700	Melon (DHL92) v3.6.1	cmomedB499
CmoCh01G017700	Silver-seed gourd	carcmoB0133
CmoCh01G017700	Silver-seed gourd	carcmoB0442
CmoCh01G017700	Silver-seed gourd	carcmoB1043
CmoCh01G017700	Cucumber (Chinese Long) v3	cmocucB0541
CmoCh01G017700	Watermelon (97103) v2	cmowmbB456
CmoCh01G017700	Wax gourd	cmowgoB0617
CmoCh01G017700	Wax gourd	cmowgoB0629
CmoCh01G017700	Cucurbita moschata (Rifu)	cmocmoB014
CmoCh01G017700	Cucurbita moschata (Rifu)	cmocmoB020
CmoCh01G017700	Cucurbita moschata (Rifu)	cmocmoB067
CmoCh01G017700	Cucumber (Gy14) v1	cgycmoB0965
CmoCh01G017700	Cucurbita maxima (Rimu)	cmacmoB042
CmoCh01G017700	Cucurbita maxima (Rimu)	cmacmoB470
CmoCh01G017700	Wild cucumber (PI 183967)	cmocpiB457
CmoCh01G017700	Wild cucumber (PI 183967)	cmocpiB467
CmoCh01G017700	Cucumber (Chinese Long) v2	cmocuB453
CmoCh01G017700	Cucumber (Chinese Long) v2	cmocuB463
CmoCh01G017700	Watermelon (Charleston Gray)	cmowcgB408
CmoCh01G017700	Watermelon (97103) v1	cmowmB429
CmoCh01G017700	Cucurbita pepo (Zucchini)	cmocpeB445
CmoCh01G017700	Cucurbita pepo (Zucchini)	cmocpeB462
CmoCh01G017700	Bottle gourd (USVL1VR-Ls)	cmolsiB422
CmoCh01G017700	Cucumber (Gy14) v2	cgybcmoB103
CmoCh01G017700	Cucumber (Gy14) v2	cgybcmoB475
CmoCh01G017700	Cucumber (Gy14) v2	cgybcmoB926