CmoCh01G017700.1 (mRNA) Cucurbita moschata (Rifu)

NameCmoCh01G017700.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionActivating transcription factor 7-interacting 1
LocationCmo_Chr01 : 13104874 .. 13106949 (+)
Sequence length1280
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCTCTATATAAGGTTTAAAATGAAAATTCCAATGGCCTTTGCGTTGCACGTTCATTATGTTTACAGGGCTTCTCTTGTTCGTATGCCCTCTACATATCTGGATGACCAAGCTTTGATTAGCTGTGCTCTAATTGCATCCGATCTTTTCTCCTATTATCATGACTCTGGGTGCTTGTTATCTGAAATCTGTTGGTGCATATCAGATACTTTCCTCAGGATGCTGCTGCAGTCAGTTTTGCCAACCACCTACTTATTGGTCAGTATTTCTTTCTTTCTTCAGTTTCGTTTACTATGCTTGTAGTATAATTATTTGAAGCAGTAGTACTTCTACTAGGAGATTGTTGCCTTTCCCTTATGAGATGTAGTTTTAGCTTCTGCAACTCTGTTATTATCCATCAAGATACACGGCCATGGTGGCTTAAGCTTGATCGGATACAACTTTGGAGTAATATTGCTTATTCACCTCCATGTGGTAAAGGGAATGTACCTTTGGTTTTACTGAACCGTTTCTTCTGCAGGGTTCTGCAGAGGAAGTTCTTCTGCGAGAAGTGTTATATGACGCTGCAATAATACCAGATTACCCATTCATTAAACTTCAATTTGGAACTGAACGACCTGCTTTGGATTTAAGAACTATTTGTTTGAATTGGCTATTTGTTGCTGAAAATGGCATTCGAACCTTCAGGTATAATAAATCATAGTTCTGGACGATACATTTCATGAAAGGTAGTAAAATTTAATAATGTGCACCGTCTGATTGGTGCAGAGAAACTGGTAATCTGAGAAAGGCTATGTCCTACATAAATGCCTTCCGCAATTCTTGTTGGCCCTCTCAGTTGATCAATTGGGTCAGAAACCAACCAGGCTTCAGTGAGAGGATGAGTCAACCAAACATCTCCACACCCACTGCTCTCATCGGTATGTTCTATACGTGTATACCGTACATTAACTTTGTTCATATAAGTTTCATGCACTTTGTGAGAAATCACAGACCTCCACAGTAGTACGAAATTGTCCACTTTGAGCATAAGCTCTTGTGGCTTTCTTTTTGGTCTTCCCAAAAGGTCCCATACCAATGGCAACGTATTTCTTACTTGTAAACTCATGATCATCCCTTTAATTAGTTGATGTGAGAGTCCTCTCCCAACCATCCTCAACACACTTCGATTGTGGTGAAGTTGACATTAGTGTAGAACACAGAACTATTATGTGTTGAACTTTCTTAAGGAATTGATTATAATCCATCTATACTATGAGTCATGTTTGTGTTTGCTGGACAACATTGAGACTTGGCTGGGCATTATCTGAATATATATGTGTGTGTTTGATGTTCACTTACTGACGGATGACGCTAAATTGATTTAACTTCAGAGTGGCTTCTGGTATTGGAAAATCAAGGGGTGAGAGTGTTCGACCATTTGAACTCCAAGTTCAGAGCCAGAGAAATCACTTGCAAATCAGGAGCCGAGTTTGTAGAAGCAGCAACAAAGGTTTCGGATGTCAGAAATGTGATGGATGAAGATGCCTCCGTTGGTGACTTTGACATGGTTGATTCAGTGGCTTTTGCAGCAGCACAGGGAACACCCATGACCTTGAATACAAACGGCATTGGAAATGGAAGAAAGAGGAAAGAATGCATGAATGACAACGGAGACACGAGGGTAAAGTTCCTCAGGAAACATCTCCACGACAATCCACTTAGGGAGAAATCTTTGCCATTAGTTTGATTTGGAACCCCCATCACTTCGAAGATGCTACTATATATATATATATATATATATATGTGGGCATCAGCTTAACACATATCTATGATACCATGGAGGAATTTTGATTTTGTGCCTGCTTTGTGTCACGGTCATGTTCGTCTAAGATGTGTTGACTCTGCAGCCAGCCTCTTGGCTTTTAACTTTTGTTAGGTAGCGATCCAGTCTTGAGATTTAAAGCTTCGAATCAATTGTTTTAGGCTTTTACATGTAGAGATTTGATGAGATGATGTTGAAGGCAAGGCCAGTAGGTTGTAAACGTTGAAAGATTTGCCATAATACACATGGTCCTGATGAACACTTTTGCT

mRNA sequence

ATGTCTCTCTATATAAGGTTTAAAATGAAAATTCCAATGGCCTTTGCGTTGCACGTTCATTATGTTTACAGGGCTTCTCTTGTTCGTATGCCCTCTACATATCTGGATGACCAAGCTTTGATTAGCTGTGCTCTAATTGCATCCGATCTTTTCTCCTATTATCATGACTCTGGGTGCTTGTTATCTGAAATCTGTTGGTGCATATCAGATACTTTCCTCAGGATGCTGCTGCAGTCAGTTTTGCCAACCACCTACTTATTGGGTTCTGCAGAGGAAGTTCTTCTGCGAGAAGTGTTATATGACGCTGCAATAATACCAGATTACCCATTCATTAAACTTCAATTTGGAACTGAACGACCTGCTTTGGATTTAAGAACTATTTGTTTGAATTGGCTATTTGTTGCTGAAAATGGCATTCGAACCTTCAGAGAAACTGGTAATCTGAGAAAGGCTATGTCCTACATAAATGCCTTCCGCAATTCTTGTTGGCCCTCTCAGTTGATCAATTGGGTCAGAAACCAACCAGGCTTCAGTGAGAGGATGAGTCAACCAAACATCTCCACACCCACTGCTCTCATCGAGTGGCTTCTGGTATTGGAAAATCAAGGGGTGAGAGTGTTCGACCATTTGAACTCCAAGTTCAGAGCCAGAGAAATCACTTGCAAATCAGGAGCCGAGTTTGTAGAAGCAGCAACAAAGGTTTCGGATGTCAGAAATGTGATGGATGAAGATGCCTCCGTTGGTGACTTTGACATGGTTGATTCAGTGGCTTTTGCAGCAGCACAGGGAACACCCATGACCTTGAATACAAACGGCATTGGAAATGGAAGAAAGAGGAAAGAATGCATGAATGACAACGGAGACACGAGGGTAAAGTTCCTCAGGAAACATCTCCACGACAATCCACTTAGGGAGAAATCTTTGCCATTAGTTTGATTTGGAACCCCCATCACTTCGAAGATGCTACTATATATATATATATATATATATATGTGGGCATCAGCTTAACACATATCTATGATACCATGGAGGAATTTTGATTTTGTGCCTGCTTTGTGTCACGGTCATGTTCGTCTAAGATGTGTTGACTCTGCAGCCAGCCTCTTGGCTTTTAACTTTTGTTAGGTAGCGATCCAGTCTTGAGATTTAAAGCTTCGAATCAATTGTTTTAGGCTTTTACATGTAGAGATTTGATGAGATGATGTTGAAGGCAAGGCCAGTAGGTTGTAAACGTTGAAAGATTTGCCATAATACACATGGTCCTGATGAACACTTTTGCT

Coding sequence (CDS)

ATGTCTCTCTATATAAGGTTTAAAATGAAAATTCCAATGGCCTTTGCGTTGCACGTTCATTATGTTTACAGGGCTTCTCTTGTTCGTATGCCCTCTACATATCTGGATGACCAAGCTTTGATTAGCTGTGCTCTAATTGCATCCGATCTTTTCTCCTATTATCATGACTCTGGGTGCTTGTTATCTGAAATCTGTTGGTGCATATCAGATACTTTCCTCAGGATGCTGCTGCAGTCAGTTTTGCCAACCACCTACTTATTGGGTTCTGCAGAGGAAGTTCTTCTGCGAGAAGTGTTATATGACGCTGCAATAATACCAGATTACCCATTCATTAAACTTCAATTTGGAACTGAACGACCTGCTTTGGATTTAAGAACTATTTGTTTGAATTGGCTATTTGTTGCTGAAAATGGCATTCGAACCTTCAGAGAAACTGGTAATCTGAGAAAGGCTATGTCCTACATAAATGCCTTCCGCAATTCTTGTTGGCCCTCTCAGTTGATCAATTGGGTCAGAAACCAACCAGGCTTCAGTGAGAGGATGAGTCAACCAAACATCTCCACACCCACTGCTCTCATCGAGTGGCTTCTGGTATTGGAAAATCAAGGGGTGAGAGTGTTCGACCATTTGAACTCCAAGTTCAGAGCCAGAGAAATCACTTGCAAATCAGGAGCCGAGTTTGTAGAAGCAGCAACAAAGGTTTCGGATGTCAGAAATGTGATGGATGAAGATGCCTCCGTTGGTGACTTTGACATGGTTGATTCAGTGGCTTTTGCAGCAGCACAGGGAACACCCATGACCTTGAATACAAACGGCATTGGAAATGGAAGAAAGAGGAAAGAATGCATGAATGACAACGGAGACACGAGGGTAAAGTTCCTCAGGAAACATCTCCACGACAATCCACTTAGGGAGAAATCTTTGCCATTAGTTTGA
BLAST of CmoCh01G017700.1 vs. TrEMBL
Match: A0A0A0L0N4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G645970 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 4.2e-110
Identity = 205/253 (81.03%), Postives = 218/253 (86.17%), Query Frame = 1

Query: 70  DTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGTERPALDLRTICL 129
           D FLRMLLQSVLPTTYLLGSA+E+LLREVLYDAAIIP+YPF+KLQFGTERPA DLRTICL
Sbjct: 251 DIFLRMLLQSVLPTTYLLGSADEILLREVLYDAAIIPEYPFLKLQFGTERPAADLRTICL 310

Query: 130 NWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNISTP 189
           NWLFVA+NGIR+FR+TGNL KAMSYINAFRNSCWPSQLINW+RNQPGFSERMSQPNI TP
Sbjct: 311 NWLFVADNGIRSFRDTGNLSKAMSYINAFRNSCWPSQLINWIRNQPGFSERMSQPNICTP 370

Query: 190 TALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVSD-----------VR 249
           TALIEWLLVLE+QGVRVFDH NSK RARE  CKS AEFV+ A KVSD             
Sbjct: 371 TALIEWLLVLEDQGVRVFDHSNSKLRARETICKSEAEFVQPA-KVSDGMNLDVKFFNNAS 430

Query: 250 NVMDEDASVGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDNGDTRVKFLRKHL 309
           NVMDED SVGDFDMVDS+A AA Q T +TLN NGI NGRKRKECM D  D RVKFLR+HL
Sbjct: 431 NVMDEDPSVGDFDMVDSMATAAVQATSITLNGNGIENGRKRKECMTDKEDMRVKFLRQHL 490

Query: 310 HDNPLREKSLPLV 312
           HDNPLREKSLPLV
Sbjct: 491 HDNPLREKSLPLV 502

BLAST of CmoCh01G017700.1 vs. TrEMBL
Match: A0A061GJ23_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_037271 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.1e-46
Identity = 107/251 (42.63%), Postives = 146/251 (58.17%), Query Frame = 1

Query: 70  DTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGTERPALDLRTICL 129
           D   RMLL+ VLP T LLG   E+LLRE+LYDA I  D+ F+  Q G   P   L+ + L
Sbjct: 253 DILFRMLLEPVLPITSLLGHGNEILLREILYDAVITMDHTFLSPQGGFLLPGKQLKELAL 312

Query: 130 NWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNISTP 189
            W FVA+N IR+ RE GN  KA++YINAF  SC PSQLINWV +Q G  ++    N+STP
Sbjct: 313 TWSFVADNAIRSVRENGNQTKAITYINAFSESCLPSQLINWVTSQTGMGDKARSLNVSTP 372

Query: 190 TALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVSD----------VRN 249
            ALI+WLL++E+QGVR+F+   SK  A+ + CKS  E+     K +           V  
Sbjct: 373 VALIKWLLIIEDQGVRIFECDISKVYAKAVLCKSRVEYEIPVVKTNGKILGENLVYMVHE 432

Query: 250 VMDEDASVGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDNGDTRVKFLRKHLH 309
             ++  + GD +M+DS+        P  + +    + RKRKE  N   +  VKF++ H H
Sbjct: 433 GREDKKADGDLEMIDSMD-TVPLTAPCLMTSTPTDSVRKRKEGSNVEEEIPVKFVKYHFH 492

Query: 310 DNPLREKSLPL 311
           +N +REK L L
Sbjct: 493 ENLVREKLLSL 502

BLAST of CmoCh01G017700.1 vs. TrEMBL
Match: A0A061GK05_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_037271 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.8e-44
Identity = 106/251 (42.23%), Postives = 144/251 (57.37%), Query Frame = 1

Query: 70  DTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGTERPALDLRTICL 129
           D   RMLL+ VLP T LLG   E+LLRE+LYDA I  D+ F+  Q G   P   L+ + L
Sbjct: 253 DILFRMLLEPVLPITSLLGHGNEILLREILYDAVITMDHTFLSPQGGFLLPGKQLKELAL 312

Query: 130 NWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNISTP 189
            W FVA+N IR   E GN  KA++YINAF  SC PSQLINWV +Q G  ++    N+STP
Sbjct: 313 TWSFVADNAIR---ENGNQTKAITYINAFSESCLPSQLINWVTSQTGMGDKARSLNVSTP 372

Query: 190 TALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVSD----------VRN 249
            ALI+WLL++E+QGVR+F+   SK  A+ + CKS  E+     K +           V  
Sbjct: 373 VALIKWLLIIEDQGVRIFECDISKVYAKAVLCKSRVEYEIPVVKTNGKILGENLVYMVHE 432

Query: 250 VMDEDASVGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDNGDTRVKFLRKHLH 309
             ++  + GD +M+DS+        P  + +    + RKRKE  N   +  VKF++ H H
Sbjct: 433 GREDKKADGDLEMIDSMD-TVPLTAPCLMTSTPTDSVRKRKEGSNVEEEIPVKFVKYHFH 492

Query: 310 DNPLREKSLPL 311
           +N +REK L L
Sbjct: 493 ENLVREKLLSL 499

BLAST of CmoCh01G017700.1 vs. TrEMBL
Match: A5AY35_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021599 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 4.4e-43
Identity = 107/263 (40.68%), Postives = 153/263 (58.17%), Query Frame = 1

Query: 58  GCLLSEICWCISDTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGT 117
           GC +  +   + +T LRMLL+ VLP T LL + +EVLLR+VLYDA I+  Y F+  Q G 
Sbjct: 193 GCGVGYLAGIVMNTLLRMLLEPVLPVTSLLSAEDEVLLRKVLYDAVIMEKYTFLNPQIGI 252

Query: 118 ERPALDLRTICLNWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGF 177
           +     L+ I + WLFVA+N I   RE G+  KA+SYINAF  S  PSQLI WV  Q G 
Sbjct: 253 QLFGNQLKNIVVTWLFVADNAILYVRENGDQAKAISYINAFSESQLPSQLIKWVATQSGM 312

Query: 178 SERMSQPNISTPTALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEF------VEAA 237
            E M +P  STP A ++WLL+ E+QG+RVFDH  S+  A+ +  KS  E+      ++  
Sbjct: 313 GEEMGRPKFSTPIAFMKWLLIAEDQGIRVFDHNISRLHAKAMMYKSRVEYELPVCKLDGK 372

Query: 238 TKVSDVRNVMDEDAS-----VGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDN 297
           T+ ++V    D + S      GD +M+DS+  AA      T+N     +GR++++ + D 
Sbjct: 373 TRDNNVFFYTDNEGSGEEKIDGDQEMIDSLN-AAMLAAACTVNLT--TDGRRKRKGIIDE 432

Query: 298 GDTRVKFLRKHLHDNPLREKSLP 310
           G T+ KF + HL +N   +  LP
Sbjct: 433 GKTQFKFGKYHLLENSFGDNHLP 452

BLAST of CmoCh01G017700.1 vs. TrEMBL
Match: A0A0B0MF55_GOSAR (Activating transcription factor 7-interacting 1 OS=Gossypium arboreum GN=F383_19617 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 5.7e-43
Identity = 103/251 (41.04%), Postives = 143/251 (56.97%), Query Frame = 1

Query: 70  DTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGTERPALDLRTICL 129
           D FLRMLL+ VLP T  LG   EV+LRE LYDA I  D+ F+  + G   P   ++ + L
Sbjct: 116 DIFLRMLLEPVLPVTSPLGHGNEVILRETLYDAVIKMDHAFLGPEGGILLPGRQVKDLAL 175

Query: 130 NWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNISTP 189
            W FVA+N IR+ RE GN  KA+SYINAF  S   SQLI WV +Q G  ++ + PN+STP
Sbjct: 176 TWSFVADNAIRSVRENGNQTKAISYINAFSESWLLSQLIKWVTSQTGMVDKATSPNVSTP 235

Query: 190 TALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVSD----------VRN 249
            ALI+WLL++E+QGVR+F+   SK  A+ + CKS  E+     K+S           V  
Sbjct: 236 VALIKWLLIVEDQGVRIFECDISKVYAKAVLCKSRVEYEIPVDKISGKYSAENPACMVHE 295

Query: 250 VMDEDASVGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDNGDTRVKFLRKHLH 309
             ++  +  D +M+DS+         +  +T      RKRKE  N   +  VKF++ HL 
Sbjct: 296 RKEDKTADNDLEMIDSMDTVRLSAPCLMKSTAAADGVRKRKEGSNIEEEIPVKFIKYHLC 355

Query: 310 DNPLREKSLPL 311
           +N + +K L L
Sbjct: 356 ENSVTDKLLSL 366

BLAST of CmoCh01G017700.1 vs. TAIR10
Match: AT5G11780.1 (AT5G11780.1 unknown protein)

HSP 1 Score: 104.4 bits (259), Expect = 1.3e-22
Identity = 80/242 (33.06%), Postives = 117/242 (48.35%), Query Frame = 1

Query: 70  DTFLRMLLQSVLPTTYLLGSA--EEVLLREVLYDAAIIP-DYPFIKLQFGTERPALDLRT 129
           D  L+MLL+  L  T L+G    +E  L E++ +A I   +  F+    GT + +L L+ 
Sbjct: 255 DVILKMLLEPYLHLTSLMGVVPEDEAFLTEIITEAVIKSVEKLFLNPGNGTSQRSLHLKN 314

Query: 130 ICLNWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNI 189
           I +NWLF+ +  + + R   +  K   Y N F NS  P  LINWV +Q            
Sbjct: 315 IAINWLFLFDKTMASLRRNKDQEKISMYTNMFSNSLIPYHLINWVISQGEVIRDADTLRN 374

Query: 190 STPTALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVSDVRNVMDEDAS 249
            TP + IEWL+ LE QG RVF+  +SK  A+ +  +S  + +   T +       D+D  
Sbjct: 375 LTPASFIEWLVSLEEQGPRVFNCDHSKNYAKSVIHRSRPD-LSIGTTLQKQEEEFDQDTD 434

Query: 250 VGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRK-ECMNDNGDTRVKFLRKHLHDNPLRE 308
           + D   V S++  +              N RKRK E  N  G+T+VK L KH H N L+E
Sbjct: 435 MADEQNVSSISILSR-------------NTRKRKEERHNKEGETKVK-LFKHRHSN-LQE 480

BLAST of CmoCh01G017700.1 vs. NCBI nr
Match: gi|778696570|ref|XP_011654170.1| (PREDICTED: uncharacterized protein LOC101207241 [Cucumis sativus])

HSP 1 Score: 406.0 bits (1042), Expect = 6.0e-110
Identity = 205/253 (81.03%), Postives = 218/253 (86.17%), Query Frame = 1

Query: 70  DTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGTERPALDLRTICL 129
           D FLRMLLQSVLPTTYLLGSA+E+LLREVLYDAAIIP+YPF+KLQFGTERPA DLRTICL
Sbjct: 251 DIFLRMLLQSVLPTTYLLGSADEILLREVLYDAAIIPEYPFLKLQFGTERPAADLRTICL 310

Query: 130 NWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNISTP 189
           NWLFVA+NGIR+FR+TGNL KAMSYINAFRNSCWPSQLINW+RNQPGFSERMSQPNI TP
Sbjct: 311 NWLFVADNGIRSFRDTGNLSKAMSYINAFRNSCWPSQLINWIRNQPGFSERMSQPNICTP 370

Query: 190 TALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVSD-----------VR 249
           TALIEWLLVLE+QGVRVFDH NSK RARE  CKS AEFV+ A KVSD             
Sbjct: 371 TALIEWLLVLEDQGVRVFDHSNSKLRARETICKSEAEFVQPA-KVSDGMNLDVKFFNNAS 430

Query: 250 NVMDEDASVGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDNGDTRVKFLRKHL 309
           NVMDED SVGDFDMVDS+A AA Q T +TLN NGI NGRKRKECM D  D RVKFLR+HL
Sbjct: 431 NVMDEDPSVGDFDMVDSMATAAVQATSITLNGNGIENGRKRKECMTDKEDMRVKFLRQHL 490

Query: 310 HDNPLREKSLPLV 312
           HDNPLREKSLPLV
Sbjct: 491 HDNPLREKSLPLV 502

BLAST of CmoCh01G017700.1 vs. NCBI nr
Match: gi|659103794|ref|XP_008452705.1| (PREDICTED: uncharacterized protein LOC103493648 [Cucumis melo])

HSP 1 Score: 405.2 bits (1040), Expect = 1.0e-109
Identity = 205/253 (81.03%), Postives = 224/253 (88.54%), Query Frame = 1

Query: 70  DTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGTERPALDLRTICL 129
           D FLRMLL SVLPTTYLLGSA+E+LLREVLYDAAIIP+YPF+KLQFGTERPA DLRTICL
Sbjct: 251 DIFLRMLLHSVLPTTYLLGSADEILLREVLYDAAIIPEYPFLKLQFGTERPAADLRTICL 310

Query: 130 NWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNISTP 189
           +WLFVA+NGIR+FR+TGNL KAMSYINAFRNSCWPSQLINW+RNQPGFSERMSQPNIS+P
Sbjct: 311 SWLFVADNGIRSFRDTGNLSKAMSYINAFRNSCWPSQLINWIRNQPGFSERMSQPNISSP 370

Query: 190 TALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVS-----DVR------ 249
           TALIEWLLVLE+QGVRVFDH NSK RAREI CKSGAEFV+AA KVS     DV+      
Sbjct: 371 TALIEWLLVLEDQGVRVFDHSNSKLRAREIICKSGAEFVQAA-KVSNGMNLDVKFFNNAS 430

Query: 250 NVMDEDASVGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDNGDTRVKFLRKHL 309
           N+MDED SVGDFDMVDS+A AA Q T +TLN NGI NGRKRKECM+D  D RVKFLR+HL
Sbjct: 431 NMMDEDPSVGDFDMVDSMATAAVQATSITLNGNGIENGRKRKECMDDKEDMRVKFLRQHL 490

Query: 310 HDNPLREKSLPLV 312
           HD+PLREKSLPLV
Sbjct: 491 HDSPLREKSLPLV 502

BLAST of CmoCh01G017700.1 vs. NCBI nr
Match: gi|590573921|ref|XP_007012256.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 195.3 bits (495), Expect = 1.6e-46
Identity = 107/251 (42.63%), Postives = 146/251 (58.17%), Query Frame = 1

Query: 70  DTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGTERPALDLRTICL 129
           D   RMLL+ VLP T LLG   E+LLRE+LYDA I  D+ F+  Q G   P   L+ + L
Sbjct: 253 DILFRMLLEPVLPITSLLGHGNEILLREILYDAVITMDHTFLSPQGGFLLPGKQLKELAL 312

Query: 130 NWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNISTP 189
            W FVA+N IR+ RE GN  KA++YINAF  SC PSQLINWV +Q G  ++    N+STP
Sbjct: 313 TWSFVADNAIRSVRENGNQTKAITYINAFSESCLPSQLINWVTSQTGMGDKARSLNVSTP 372

Query: 190 TALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVSD----------VRN 249
            ALI+WLL++E+QGVR+F+   SK  A+ + CKS  E+     K +           V  
Sbjct: 373 VALIKWLLIIEDQGVRIFECDISKVYAKAVLCKSRVEYEIPVVKTNGKILGENLVYMVHE 432

Query: 250 VMDEDASVGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDNGDTRVKFLRKHLH 309
             ++  + GD +M+DS+        P  + +    + RKRKE  N   +  VKF++ H H
Sbjct: 433 GREDKKADGDLEMIDSMD-TVPLTAPCLMTSTPTDSVRKRKEGSNVEEEIPVKFVKYHFH 492

Query: 310 DNPLREKSLPL 311
           +N +REK L L
Sbjct: 493 ENLVREKLLSL 502

BLAST of CmoCh01G017700.1 vs. NCBI nr
Match: gi|590573924|ref|XP_007012257.1| (Uncharacterized protein isoform 2 [Theobroma cacao])

HSP 1 Score: 188.0 bits (476), Expect = 2.6e-44
Identity = 106/251 (42.23%), Postives = 144/251 (57.37%), Query Frame = 1

Query: 70  DTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGTERPALDLRTICL 129
           D   RMLL+ VLP T LLG   E+LLRE+LYDA I  D+ F+  Q G   P   L+ + L
Sbjct: 253 DILFRMLLEPVLPITSLLGHGNEILLREILYDAVITMDHTFLSPQGGFLLPGKQLKELAL 312

Query: 130 NWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGFSERMSQPNISTP 189
            W FVA+N IR   E GN  KA++YINAF  SC PSQLINWV +Q G  ++    N+STP
Sbjct: 313 TWSFVADNAIR---ENGNQTKAITYINAFSESCLPSQLINWVTSQTGMGDKARSLNVSTP 372

Query: 190 TALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEFVEAATKVSD----------VRN 249
            ALI+WLL++E+QGVR+F+   SK  A+ + CKS  E+     K +           V  
Sbjct: 373 VALIKWLLIIEDQGVRIFECDISKVYAKAVLCKSRVEYEIPVVKTNGKILGENLVYMVHE 432

Query: 250 VMDEDASVGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDNGDTRVKFLRKHLH 309
             ++  + GD +M+DS+        P  + +    + RKRKE  N   +  VKF++ H H
Sbjct: 433 GREDKKADGDLEMIDSMD-TVPLTAPCLMTSTPTDSVRKRKEGSNVEEEIPVKFVKYHFH 492

Query: 310 DNPLREKSLPL 311
           +N +REK L L
Sbjct: 493 ENLVREKLLSL 499

BLAST of CmoCh01G017700.1 vs. NCBI nr
Match: gi|147818798|emb|CAN67286.1| (hypothetical protein VITISV_021599 [Vitis vinifera])

HSP 1 Score: 183.3 bits (464), Expect = 6.3e-43
Identity = 107/263 (40.68%), Postives = 153/263 (58.17%), Query Frame = 1

Query: 58  GCLLSEICWCISDTFLRMLLQSVLPTTYLLGSAEEVLLREVLYDAAIIPDYPFIKLQFGT 117
           GC +  +   + +T LRMLL+ VLP T LL + +EVLLR+VLYDA I+  Y F+  Q G 
Sbjct: 193 GCGVGYLAGIVMNTLLRMLLEPVLPVTSLLSAEDEVLLRKVLYDAVIMEKYTFLNPQIGI 252

Query: 118 ERPALDLRTICLNWLFVAENGIRTFRETGNLRKAMSYINAFRNSCWPSQLINWVRNQPGF 177
           +     L+ I + WLFVA+N I   RE G+  KA+SYINAF  S  PSQLI WV  Q G 
Sbjct: 253 QLFGNQLKNIVVTWLFVADNAILYVRENGDQAKAISYINAFSESQLPSQLIKWVATQSGM 312

Query: 178 SERMSQPNISTPTALIEWLLVLENQGVRVFDHLNSKFRAREITCKSGAEF------VEAA 237
            E M +P  STP A ++WLL+ E+QG+RVFDH  S+  A+ +  KS  E+      ++  
Sbjct: 313 GEEMGRPKFSTPIAFMKWLLIAEDQGIRVFDHNISRLHAKAMMYKSRVEYELPVCKLDGK 372

Query: 238 TKVSDVRNVMDEDAS-----VGDFDMVDSVAFAAAQGTPMTLNTNGIGNGRKRKECMNDN 297
           T+ ++V    D + S      GD +M+DS+  AA      T+N     +GR++++ + D 
Sbjct: 373 TRDNNVFFYTDNEGSGEEKIDGDQEMIDSLN-AAMLAAACTVNLT--TDGRRKRKGIIDE 432

Query: 298 GDTRVKFLRKHLHDNPLREKSLP 310
           G T+ KF + HL +N   +  LP
Sbjct: 433 GKTQFKFGKYHLLENSFGDNHLP 452

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L0N4_CUCSA4.2e-11081.03Uncharacterized protein OS=Cucumis sativus GN=Csa_4G645970 PE=4 SV=1[more]
A0A061GJ23_THECC1.1e-4642.63Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_037271 PE=4 SV=1[more]
A0A061GK05_THECC1.8e-4442.23Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_037271 PE=4 SV=1[more]
A5AY35_VITVI4.4e-4340.68Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021599 PE=4 SV=1[more]
A0A0B0MF55_GOSAR5.7e-4341.04Activating transcription factor 7-interacting 1 OS=Gossypium arboreum GN=F383_19... [more]
Match NameE-valueIdentityDescription
AT5G11780.11.3e-2233.06 unknown protein[more]
Match NameE-valueIdentityDescription
gi|778696570|ref|XP_011654170.1|6.0e-11081.03PREDICTED: uncharacterized protein LOC101207241 [Cucumis sativus][more]
gi|659103794|ref|XP_008452705.1|1.0e-10981.03PREDICTED: uncharacterized protein LOC103493648 [Cucumis melo][more]
gi|590573921|ref|XP_007012256.1|1.6e-4642.63Uncharacterized protein isoform 1 [Theobroma cacao][more]
gi|590573924|ref|XP_007012257.1|2.6e-4442.23Uncharacterized protein isoform 2 [Theobroma cacao][more]
gi|147818798|emb|CAN67286.1|6.3e-4340.68hypothetical protein VITISV_021599 [Vitis vinifera][more]
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh01G017700CmoCh01G017700gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh01G017700.1CmoCh01G017700.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh01G017700.1.exon.4CmoCh01G017700.1.exon.4exon
CmoCh01G017700.1.exon.3CmoCh01G017700.1.exon.3exon
CmoCh01G017700.1.exon.2CmoCh01G017700.1.exon.2exon
CmoCh01G017700.1.exon.1CmoCh01G017700.1.exon.1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh01G017700.1.CDS.1CmoCh01G017700.1.CDS.1CDS
CmoCh01G017700.1.CDS.2CmoCh01G017700.1.CDS.2CDS
CmoCh01G017700.1.CDS.3CmoCh01G017700.1.CDS.3CDS
CmoCh01G017700.1.CDS.4CmoCh01G017700.1.CDS.4CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh01G017700.1.three_prime_UTR.1CmoCh01G017700.1.three_prime_UTR.1three_prime_UTR


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35505FAMILY NOT NAMEDcoord: 69..311
score: 5.8
NoneNo IPR availablePANTHERPTHR35505:SF1SUBFAMILY NOT NAMEDcoord: 69..311
score: 5.8