CmoCh20G000560 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTCTCTCAATCTCTCTTCACCTCTCAAAATACCAAAATTGCCCCCAACTTAAGAACACAATTCTCAGCCCTAGATCGTTTCCTTCTCACAATCATCTTCAAGGACATTCCACTCCCGACGCGTTTCCGGCCACCGTTTCTTGCTGGTCCAAGGTTAGTAATCAACCAAGTTTGCTTTAACAGGTTTTCTCCTTCTTCAGTCGCTTAATATAGTTCATCTTGCATTTCTGATTGTGATTGTTTTTTGCCTGATTTTGTTTCTTATTCGGTTCTGATTTCTGGCTTATTGAACTATGTGTGGATCGACTGTGTATTTCTTTGGTACTTTTTTTCCTTTCTCCTTCTTTTTTGCTTGCCATTTTTTTTCCTTTATTCCTCTTCCGCCATTATGAGATCGATAGACTCTCTCAGTCCACTCCTAGTTACTTTCGACATCTTCCTACATAATATTCAGTTCATCGATTGATCAATTAATTAGTGGATTTTGTTCTCCCGGTCGAACTTGAATCTGCTATTTATTTCAAAGTTTATTCTAATCAGATTAGACAGAGTTTGAGAGAAACTAGTGGCAATTTAAGTTTCCAAATTCCTTTTTCAGTCCTCTTCCGATCTCAATTTGGCACAACTTTAATGTCTTTTTCTAAATCCTTCAGTGATTATGTTCCTTCTCCACACTCCTAGTGCACCGGTTTCAAGATCGTTCTATCAAATAAAACATATTTAAAACGGTGTTCTTACATTTCAGCTTTACTGCTACTTCTAATCATAGCTTTTACTCCTCCTTCACTTTTTGCCTCACAAACATAATCGCCACGAACCCTCAAATAATTACACTGTCGCTTTAAATCAAGCTCCAAAGGTTTTTTATGCTAGAAAATGTGAAGATCCCCCCAAGCTCCAAAATTTTCAGATGACCTTTTGGTTTTTGTTTCCAAAATAATCTCAGTGTAGATGTTTTGTAGTTTTCGTTTTCAAGAAAGCCACAGGTGTCGAGCATAGGATAAGAACATCTGAATAATACCTGATTGAGATCATCACCATCCAACGAACAAAGAGAGCAAACCGAAAGCATGAGATAGTTGAATGGAAGTTTCCTTTGAATAGAAGTAGACTACTGTTTATAATAATCCACAAGAGTATATTGATTCTCTTTGTACTTTTCTGCAAAAAGCTCCTTATTCAAAGGGGAAGAAGAGGGCAAGTCTCTTGATTGGGATTTCACAAATAAGCGGGAAGAATCTAGAGACCAAAATGATGTATGGTCAGTTAGTTCGGTTTATCATAAATCTCTCTCTCTCTCTCCCTCTGTCTTGAACAATATAGCTCAAACCTTCAAATGTCACTTATAAAGAGGATTTTAAAAAGTTGTGCTCTCGAATGATACAAGCAACTTGAACATGAGTTGAAGTGTTTCTCTTTTCTCAAATGAAACCAGTAACTTTCACTCGTCCAATGGATTCAATTTCTGTCAAATTATGGTTAACAATTATATTGTTTCATATTTCAAATTGTGATAAGTTGCGGAACCCACAACTTCTTTGTTGCAATTGTTTTTTTTTTTTTTTTTTTTTTTTTGAGAGAAGACTTCAGTAGCACCACTTCTTACCGAAAATAGGAAGCTAAGAAATTTTAGCTTTGTTAGTGGGTATTTGAAGAGCCAAATGTAAGTAGGTCACGCCCTGTATTTTTAACTGTCCATAGTAGATATATTTGCTCTTACATGTGATGATCAAAACGGAGTGTTTACTTCTTCGAAGTGATATTTTGGTGGCTAAACAATTGTAGCTCAAACTACACCGATCAGGTTAAAAAAATAAAATCTTCATATCAATAAAATTTTTCAAAGATTCAAGTGTTGGGAAAGCAATTTTATTTAATTCGCTACTTAGTATGCATAAGGTGGCCTTTGAAACTAGAGAGGTGCTCTAGTTCAATTGACAGGAAAACCACTTCCTAATGTGCTGATTACCAAGTGAGAGCTTAGAACAGAGGAGGTAATGGCACATGTTTTAACAATCCTCGTGTCTCCTTTGCTCTCCGTTATCTGCAAGGGTTGGAACGCTGATCCTCTCTCTAAAATCCTTTCCTTCCCCATTTCAAACCCTCGGTTAAATTTTCTCTATTTAGAACCACTACTTTGGAGTTTGTTTCTTCTATTTTGCCCTCTTGTCCTGTTTGTTACTTTTTATTTTCATTTGGTAATTTCTTTTATATTTTTGTATGTGGAGTTGTTTATGTCAATATATGGTTTAACTTTTTAATTGCCTTCTCTTGATTTCAGATTGTTCTGCTTCTTTTGATTGTATCTGAAATTGTTTACGCATTTACCCATGGGAGAGGACGATGAACAGGTACTATTTTGAGTTGTTTGTTTGATGATAAACAAATTCATGCTTTTCTCTTGAGAATTGTTTTAAGAATTATAGTTGAATGACTTGGAGTTCTAAAATCACCATTTCCAACTTGTTTTAAAATAAATCCATGATTTTTTAAGGAAAAACTAATTTAAGTCGTAGCAAATTTGAAAAGAAAAAGGAAATAAAATTTTAATAATAACTGAAACTTTTTTTTCTTAGAGAAAGTCATGCAAAACGATTTCCTAACTGCCTTGCCATTTTTTTTTACAGGATAGACCGAAGATCACAAATCTTCATTTAAGATATGATGCAGAAATGATTAGTATGAGCCATCCGCAGATGGCAAACCATCCTCACGTAATCAATCAGTCTCAAGTCATGAACCAGCCACAGGTCATTAATCAACCTCAGTTTCTGAACCAAAGCCAGCTAATGAACCATTCTCAGATAATGTCTCAGTCTCAGGCCATCAACCAGGCAAATATTTTGCCGCAGCCTCAGGCCATGCAGCAGTCCCAAATGATCATGGGTCACTCTCTGCCGCGTATGATGAGTAGCAATTATAAGGTATGGGCACACCCGCAGGCCCCTTTGGATCCTAACAAGAAGTACCGCAACTTCCCTAAGCCTAACTATGGAAATATGAAACAATCGAGGTCAGGGCGAGGCAATTGGAAGGGAAAAGGCATTAGTGACAAAAGGATAAACAATAGGAGAATAGAAAAACCTTTACCGGGTTCCATAAGTGGTCCAAATAATGCTGGAGGATATCAACCTCCAAGTCTTCAAGAGCTGCAGTCTCAAAATCGTATAAGAGCTCGAAAATTTTACTCAAAAAAGAAGTTTGGTAACAGGTTTGCACCTTATGCGCCTCGAAATACCACGTCTTTTATAATTCGTGCAAAGAAGTCTGGTGGGATCGCTTCGCTTGTGTCCCCTAGTCCTGTAACACCAACTGTGCTTCCTACTCCAATGTTCTCCCCTTCAAGGGAGGCGTTGGGTGATATGGCCAAGGAGGAATGGGGTGTTGATGGTTATGGATCAATGAAAGGGTTGATAAGGCTTCGAGGGTCTGAGAATAAGGCGGAAGTGCAGGAGGAGGAGGAAGAGGACGGTGGTGGCGGGTCGAGTGATAGTGATGTAGAGGAACATCTGGAGGTAGAACGTAGATTGGACCATGACTTGAGTCGATTTGAAATGATATACCAGAACTATGGAGTAGAGTATAATAACTGTTTGGAAAATAGGGTCGATGATCAGGATAGCCATATAGCTCAGTTGGAGGAGGAGAACTTGACACTGAAGGAGAGACTTTTTCTTATGGAGAGAGAGCTTGTTGACTTGAGGAGGAAGTTGCAACTTCTTGAAGGACAAAACCCAGCTATTGACGATGTGAATGAGGAGGTAGTGGAGAACGTATCTGAGAATGAAAGTGATGGAGGGTTGGAGATGGAGTATGTATCTGAAATTACACCAAACCAAGATGTTGATATTGATTCTAAGGAGGACGATGAAGAAGTCTTAGAGATTGAGGGTGGGGAAAAATGTGTAGGGGAAGATTTTACAAAAGGGAAAGAGGTTGATGAGAAATTGACAGTGAATGATGAAATGGTGAAGGAATCAGATGAACACCTTCCGGAAGTCAGTGTAGCAAAAGATGAAGAAATGAAGGGTGAACTTGTTTCGGGGATGGTAAATGAATGCGAGGACATGGATGAAAAATTGGCTATTACTTTGCACTCGGATTCAGGGATTGGAAACGAAACCGTGGCCAATGATGAAGAAGAGCAGAATAGATCAGAATTAGAGTTATAG GTCTCTCAATCTCTCTTCACCTCTCAAAATACCAAAATTGCCCCCAACTTAAGAACACAATTCTCAGCCCTAGATCGTTTCCTTCTCACAATCATCTTCAAGGACATTCCACTCCCGACGCGTTTCCGGCCACCGTTTCTTGCTGGTCCAAGATTGTTCTGCTTCTTTTGATTGTATCTGAAATTGTTTACGCATTTACCCATGGGAGAGGACGATGAACAGGATAGACCGAAGATCACAAATCTTCATTTAAGATATGATGCAGAAATGATTAGTATGAGCCATCCGCAGATGGCAAACCATCCTCACGTAATCAATCAGTCTCAAGTCATGAACCAGCCACAGGTCATTAATCAACCTCAGTTTCTGAACCAAAGCCAGCTAATGAACCATTCTCAGATAATGTCTCAGTCTCAGGCCATCAACCAGGCAAATATTTTGCCGCAGCCTCAGGCCATGCAGCAGTCCCAAATGATCATGGGTCACTCTCTGCCGCGTATGATGAGTAGCAATTATAAGGTATGGGCACACCCGCAGGCCCCTTTGGATCCTAACAAGAAGTACCGCAACTTCCCTAAGCCTAACTATGGAAATATGAAACAATCGAGGTCAGGGCGAGGCAATTGGAAGGGAAAAGGCATTAGTGACAAAAGGATAAACAATAGGAGAATAGAAAAACCTTTACCGGGTTCCATAAGTGGTCCAAATAATGCTGGAGGATATCAACCTCCAAGTCTTCAAGAGCTGCAGTCTCAAAATCGTATAAGAGCTCGAAAATTTTACTCAAAAAAGAAGTTTGGTAACAGGTTTGCACCTTATGCGCCTCGAAATACCACGTCTTTTATAATTCGTGCAAAGAAGTCTGGTGGGATCGCTTCGCTTGTGTCCCCTAGTCCTGTAACACCAACTGTGCTTCCTACTCCAATGTTCTCCCCTTCAAGGGAGGCGTTGGGTGATATGGCCAAGGAGGAATGGGGTGTTGATGGTTATGGATCAATGAAAGGGTTGATAAGGCTTCGAGGGTCTGAGAATAAGGCGGAAGTGCAGGAGGAGGAGGAAGAGGACGGTGGTGGCGGGTCGAGTGATAGTGATGTAGAGGAACATCTGGAGGTAGAACGTAGATTGGACCATGACTTGAGTCGATTTGAAATGATATACCAGAACTATGGAGTAGAGTATAATAACTGTTTGGAAAATAGGGTCGATGATCAGGATAGCCATATAGCTCAGTTGGAGGAGGAGAACTTGACACTGAAGGAGAGACTTTTTCTTATGGAGAGAGAGCTTGTTGACTTGAGGAGGAAGTTGCAACTTCTTGAAGGACAAAACCCAGCTATTGACGATGTGAATGAGGAGGTAGTGGAGAACGTATCTGAGAATGAAAGTGATGGAGGGTTGGAGATGGAGTATGTATCTGAAATTACACCAAACCAAGATGTTGATATTGATTCTAAGGAGGACGATGAAGAAGTCTTAGAGATTGAGGGTGGGGAAAAATGTGTAGGGGAAGATTTTACAAAAGGGAAAGAGGTTGATGAGAAATTGACAGTGAATGATGAAATGGTGAAGGAATCAGATGAACACCTTCCGGAAGTCAGTGTAGCAAAAGATGAAGAAATGAAGGGTGAACTTGTTTCGGGGATGGTAAATGAATGCGAGGACATGGATGAAAAATTGGCTATTACTTTGCACTCGGATTCAGGGATTGGAAACGAAACCGTGGCCAATGATGAAGAAGAGCAGAATAGATCAGAATTAGAGTTATAG ATGGGAGAGGACGATGAACAGGATAGACCGAAGATCACAAATCTTCATTTAAGATATGATGCAGAAATGATTAGTATGAGCCATCCGCAGATGGCAAACCATCCTCACGTAATCAATCAGTCTCAAGTCATGAACCAGCCACAGGTCATTAATCAACCTCAGTTTCTGAACCAAAGCCAGCTAATGAACCATTCTCAGATAATGTCTCAGTCTCAGGCCATCAACCAGGCAAATATTTTGCCGCAGCCTCAGGCCATGCAGCAGTCCCAAATGATCATGGGTCACTCTCTGCCGCGTATGATGAGTAGCAATTATAAGGTATGGGCACACCCGCAGGCCCCTTTGGATCCTAACAAGAAGTACCGCAACTTCCCTAAGCCTAACTATGGAAATATGAAACAATCGAGGTCAGGGCGAGGCAATTGGAAGGGAAAAGGCATTAGTGACAAAAGGATAAACAATAGGAGAATAGAAAAACCTTTACCGGGTTCCATAAGTGGTCCAAATAATGCTGGAGGATATCAACCTCCAAGTCTTCAAGAGCTGCAGTCTCAAAATCGTATAAGAGCTCGAAAATTTTACTCAAAAAAGAAGTTTGGTAACAGGTTTGCACCTTATGCGCCTCGAAATACCACGTCTTTTATAATTCGTGCAAAGAAGTCTGGTGGGATCGCTTCGCTTGTGTCCCCTAGTCCTGTAACACCAACTGTGCTTCCTACTCCAATGTTCTCCCCTTCAAGGGAGGCGTTGGGTGATATGGCCAAGGAGGAATGGGGTGTTGATGGTTATGGATCAATGAAAGGGTTGATAAGGCTTCGAGGGTCTGAGAATAAGGCGGAAGTGCAGGAGGAGGAGGAAGAGGACGGTGGTGGCGGGTCGAGTGATAGTGATGTAGAGGAACATCTGGAGGTAGAACGTAGATTGGACCATGACTTGAGTCGATTTGAAATGATATACCAGAACTATGGAGTAGAGTATAATAACTGTTTGGAAAATAGGGTCGATGATCAGGATAGCCATATAGCTCAGTTGGAGGAGGAGAACTTGACACTGAAGGAGAGACTTTTTCTTATGGAGAGAGAGCTTGTTGACTTGAGGAGGAAGTTGCAACTTCTTGAAGGACAAAACCCAGCTATTGACGATGTGAATGAGGAGGTAGTGGAGAACGTATCTGAGAATGAAAGTGATGGAGGGTTGGAGATGGAGTATGTATCTGAAATTACACCAAACCAAGATGTTGATATTGATTCTAAGGAGGACGATGAAGAAGTCTTAGAGATTGAGGGTGGGGAAAAATGTGTAGGGGAAGATTTTACAAAAGGGAAAGAGGTTGATGAGAAATTGACAGTGAATGATGAAATGGTGAAGGAATCAGATGAACACCTTCCGGAAGTCAGTGTAGCAAAAGATGAAGAAATGAAGGGTGAACTTGTTTCGGGGATGGTAAATGAATGCGAGGACATGGATGAAAAATTGGCTATTACTTTGCACTCGGATTCAGGGATTGGAAACGAAACCGTGGCCAATGATGAAGAAGAGCAGAATAGATCAGAATTAGAGTTATAG
BLAST of CmoCh20G000560 vs. TrEMBL
Match: A0A0A0L0I4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G286320 PE=4 SV=1) HSP 1 Score: 848.2 bits (2190), Expect = 5.3e-243 Identity = 448/524 (85.50%), Postives = 475/524 (90.65%), Query Frame = 1
BLAST of CmoCh20G000560 vs. TrEMBL
Match: A0A0A0KZ71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G286340 PE=4 SV=1) HSP 1 Score: 637.5 bits (1643), Expect = 1.4e-179 Identity = 341/411 (82.97%), Postives = 364/411 (88.56%), Query Frame = 1
BLAST of CmoCh20G000560 vs. TrEMBL
Match: A0A151RX10_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_031322 PE=4 SV=1) HSP 1 Score: 444.5 bits (1142), Expect = 1.8e-121 Identity = 273/485 (56.29%), Postives = 338/485 (69.69%), Query Frame = 1
BLAST of CmoCh20G000560 vs. TrEMBL
Match: V7B9V0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G005200g PE=4 SV=1) HSP 1 Score: 434.9 bits (1117), Expect = 1.4e-118 Identity = 272/492 (55.28%), Postives = 336/492 (68.29%), Query Frame = 1
BLAST of CmoCh20G000560 vs. TrEMBL
Match: A0A0L9U176_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g272300 PE=4 SV=1) HSP 1 Score: 433.7 bits (1114), Expect = 3.1e-118 Identity = 277/494 (56.07%), Postives = 341/494 (69.03%), Query Frame = 1
BLAST of CmoCh20G000560 vs. TAIR10
Match: AT5G19900.1 (AT5G19900.1 PRLI-interacting factor, putative) HSP 1 Score: 359.4 bits (921), Expect = 3.8e-99 Identity = 255/482 (52.90%), Postives = 299/482 (62.03%), Query Frame = 1
BLAST of CmoCh20G000560 vs. NCBI nr
Match: gi|659097701|ref|XP_008449767.1| (PREDICTED: uncharacterized protein LOC103491553 [Cucumis melo]) HSP 1 Score: 856.3 bits (2211), Expect = 2.8e-245 Identity = 452/524 (86.26%), Postives = 476/524 (90.84%), Query Frame = 1
BLAST of CmoCh20G000560 vs. NCBI nr
Match: gi|778693053|ref|XP_011653569.1| (PREDICTED: uncharacterized protein LOC101211007 [Cucumis sativus]) HSP 1 Score: 848.2 bits (2190), Expect = 7.6e-243 Identity = 448/524 (85.50%), Postives = 475/524 (90.65%), Query Frame = 1
BLAST of CmoCh20G000560 vs. NCBI nr
Match: gi|778693057|ref|XP_004142245.2| (PREDICTED: uncharacterized protein LOC101217509 [Cucumis sativus]) HSP 1 Score: 637.5 bits (1643), Expect = 2.0e-179 Identity = 341/411 (82.97%), Postives = 364/411 (88.56%), Query Frame = 1
BLAST of CmoCh20G000560 vs. NCBI nr
Match: gi|659097693|ref|XP_008449762.1| (PREDICTED: uncharacterized protein LOC103491551 [Cucumis melo]) HSP 1 Score: 635.2 bits (1637), Expect = 1.0e-178 Identity = 339/411 (82.48%), Postives = 363/411 (88.32%), Query Frame = 1
BLAST of CmoCh20G000560 vs. NCBI nr
Match: gi|1021568446|ref|XP_016175447.1| (PREDICTED: uncharacterized protein LOC107618036 [Arachis ipaensis]) HSP 1 Score: 451.8 bits (1161), Expect = 1.6e-123 Identity = 290/508 (57.09%), Postives = 355/508 (69.88%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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