CsaV3_7G031440 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_7G031440
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	PRLI-interacting factor A
Location	chr7 : 19887113 .. 19888680 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTAATTAATCAAATGAACAGAGGGTTTCGGTTCCGCCAACGATATCTCCGCTAAAGACGAAGCTGAAGAATTTTATGTGTTTATAATCTTCTCTCTCTCTTCTTTACTCCAAACCCTAATTTCAGATTCATAATCCCACAAATTATGAAACTACAACACAATACAGATTCACGAAGTAATTCCTTTTTTTGACTTCTCCCTTTCAATTGTGTTGCCTACTACTGACAAACTTCTCTTCTTTCCATTTCTAGGGTTTCAACAATCGGTTGGATTGTTTGTTCTTGTTCATACTTGAATCTCCCATGCCCTAATTTTCTGTTTTTGTTCTACCGGTTTCTTTCTTGCTTTTTTTTTTTTTATGTGTTTTTCTGTAATTGGGGTTTCCGAATTTTGAATTTTGTTTCGATTTGATGAATGATATGGATCATACTCAGATCTTAATGAATCATAACTTCGTTGTTTGGACTCAGCCTCCCAATTTGCCTCCGGTTCTACCGTTGGAGAATCGAGGTAAGTTTCTTCAAGCCTCTCAAAGGTCGCTCTCCACACCTTCTACTTCTATTCATGGCCGATGTTTTAGAAAAGGGAAAAGGCCTGATATGAGGCGAAAAGACTTAACTGCAATATCCTATAAAACCTCGAATTGGAACGAACTACAGTACCAAAATCGCTTGAAATCGAGGCGTTTCTATCCTAAGAAGAAGTCCAATTACCGTTTTCCTCCATTCGCGCCTCGGAATACCACTTCCTTCTTAATTCGAGCCAAACGATCCGGTGGTATTGCGTCGTTGGTTTCGCCTTATCCTGTCACTCCTGCGGTGTTGCCGACTCCCATATTTTCGCCTCTTAGAGAAGTTCTTGTTGATATGGCTAAGGAGGAGTGGGGTCTTGATGGGTATGGCTCGATGAAGGGTCTGATTAGGCTTCGGTCAGCTAAAGACTATGAGGACGAAGATGAAGAAGAAGAAGAAGATGAAGTTGGGGAATCTGGTGATAGCGATGTGGAAGGACATTTGGAGGTGGAGAGACGGCTGGATCATGATTTAAGTAGGTTTGAAATGATTTGCCCAACTTCTGTGGGTGAAGAACAGAGTACTCTTTTGGAGAATAGAGTGGATGATCGAGATTGTCACATATCCCAGCTTGAGGAAGAGAATTTAACTTTGAAGGAAAGGGTATTTTTCATGGAAAGAGAGTTAGAAGATCTAAGAAGAAGGGTTCAGTGCTTGGAAACTGAGGGTTGGCGCTTCCATCTCATGGACAATAACAAAGAGGAAACTGCAGCATCTGAGAATGCCTTTGATAATGGTGGCAACGACCTTGCATGCTCAGAGAAGAGCATTAATGACATTGGGAATGAATGAGATTACAAATTCTCATTTACCAAAGGTCAACTGAGGTGAATTTGTGCAAAATATTTGCATTAGGATTAATTTTAGAGATTTGACTTTTCAGTTTATGTAGTTTAGTAACTTTTCTTTAATCCTTTTCCTTTATGGGTCTGACTTAAATAAGAATAGATACATCTTATTAGTGTACAGAACTAACCCTTGTGTAAGAAGTTTGT

mRNA sequence

ATGAATGATATGGATCATACTCAGATCTTAATGAATCATAACTTCGTTGTTTGGACTCAGCCTCCCAATTTGCCTCCGGTTCTACCGTTGGAGAATCGAGGTAAGTTTCTTCAAGCCTCTCAAAGGTCGCTCTCCACACCTTCTACTTCTATTCATGGCCGATGTTTTAGAAAAGGGAAAAGGCCTGATATGAGGCGAAAAGACTTAACTGCAATATCCTATAAAACCTCGAATTGGAACGAACTACAGTACCAAAATCGCTTGAAATCGAGGCGTTTCTATCCTAAGAAGAAGTCCAATTACCGTTTTCCTCCATTCGCGCCTCGGAATACCACTTCCTTCTTAATTCGAGCCAAACGATCCGGTGGTATTGCGTCGTTGGTTTCGCCTTATCCTGTCACTCCTGCGGTGTTGCCGACTCCCATATTTTCGCCTCTTAGAGAAGTTCTTGTTGATATGGCTAAGGAGGAGTGGGGTCTTGATGGGTATGGCTCGATGAAGGGTCTGATTAGGCTTCGGTCAGCTAAAGACTATGAGGACGAAGATGAAGAAGAAGAAGAAGATGAAGTTGGGGAATCTGGTGATAGCGATGTGGAAGGACATTTGGAGGTGGAGAGACGGCTGGATCATGATTTAAGTAGGTTTGAAATGATTTGCCCAACTTCTGTGGGTGAAGAACAGAGTACTCTTTTGGAGAATAGAGTGGATGATCGAGATTGTCACATATCCCAGCTTGAGGAAGAGAATTTAACTTTGAAGGAAAGGGTATTTTTCATGGAAAGAGAGTTAGAAGATCTAAGAAGAAGGGTTCAGTGCTTGGAAACTGAGGGTTGGCGCTTCCATCTCATGGACAATAACAAAGAGGAAACTGCAGCATCTGAGAATGCCTTTGATAATGGTGGCAACGACCTTGCATGCTCAGAGAAGAGCATTAATGACATTGGGAATGAATGA

Coding sequence (CDS)

ATGAATGATATGGATCATACTCAGATCTTAATGAATCATAACTTCGTTGTTTGGACTCAGCCTCCCAATTTGCCTCCGGTTCTACCGTTGGAGAATCGAGGTAAGTTTCTTCAAGCCTCTCAAAGGTCGCTCTCCACACCTTCTACTTCTATTCATGGCCGATGTTTTAGAAAAGGGAAAAGGCCTGATATGAGGCGAAAAGACTTAACTGCAATATCCTATAAAACCTCGAATTGGAACGAACTACAGTACCAAAATCGCTTGAAATCGAGGCGTTTCTATCCTAAGAAGAAGTCCAATTACCGTTTTCCTCCATTCGCGCCTCGGAATACCACTTCCTTCTTAATTCGAGCCAAACGATCCGGTGGTATTGCGTCGTTGGTTTCGCCTTATCCTGTCACTCCTGCGGTGTTGCCGACTCCCATATTTTCGCCTCTTAGAGAAGTTCTTGTTGATATGGCTAAGGAGGAGTGGGGTCTTGATGGGTATGGCTCGATGAAGGGTCTGATTAGGCTTCGGTCAGCTAAAGACTATGAGGACGAAGATGAAGAAGAAGAAGAAGATGAAGTTGGGGAATCTGGTGATAGCGATGTGGAAGGACATTTGGAGGTGGAGAGACGGCTGGATCATGATTTAAGTAGGTTTGAAATGATTTGCCCAACTTCTGTGGGTGAAGAACAGAGTACTCTTTTGGAGAATAGAGTGGATGATCGAGATTGTCACATATCCCAGCTTGAGGAAGAGAATTTAACTTTGAAGGAAAGGGTATTTTTCATGGAAAGAGAGTTAGAAGATCTAAGAAGAAGGGTTCAGTGCTTGGAAACTGAGGGTTGGCGCTTCCATCTCATGGACAATAACAAAGAGGAAACTGCAGCATCTGAGAATGCCTTTGATAATGGTGGCAACGACCTTGCATGCTCAGAGAAGAGCATTAATGACATTGGGAATGAATGA

Protein sequence

MNDMDHTQILMNHNFVVWTQPPNLPPVLPLENRGKFLQASQRSLSTPSTSIHGRCFRKGKRPDMRRKDLTAISYKTSNWNELQYQNRLKSRRFYPKKKSNYRFPPFAPRNTTSFLIRAKRSGGIASLVSPYPVTPAVLPTPIFSPLREVLVDMAKEEWGLDGYGSMKGLIRLRSAKDYEDEDEEEEEDEVGESGDSDVEGHLEVERRLDHDLSRFEMICPTSVGEEQSTLLENRVDDRDCHISQLEEENLTLKERVFFMERELEDLRRRVQCLETEGWRFHLMDNNKEETAASENAFDNGGNDLACSEKSINDIGNE

Homology

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BLAST of CsaV3_7G031440 vs. NCBI nr
Match: XP_004136108.1 (PREDICTED: uncharacterized protein LOC101208199 [Cucumis sativus] >KGN45167.1 hypothetical protein Csa_7G429530 [Cucumis sativus])

HSP 1 Score: 589.0 bits (1517), Expect = 9.9e-165
Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0


Query: 4   MDHTQILMNHNFVVWTQPPNLPPVLPLENRGKFLQASQRSLSTPSTSIHGRCFRKGKRPD 63
           MDHTQILMNHNFVVWTQPPNLPPVLPLENRGKFLQASQRSLSTPSTSIHGRCFRKGKRPD
Sbjct: 1   MDHTQILMNHNFVVWTQPPNLPPVLPLENRGKFLQASQRSLSTPSTSIHGRCFRKGKRPD 60

Query: 64  MRRKDLTAISYKTSNWNELQYQNRLKSRRFYPKKKSNYRFPPFAPRNTTSFLIRAKRSGG 123
           MRRKDLTAISYKTSNWNELQYQNRLKSRRFYPKKKSNYRFPPFAPRNTTSFLIRAKRSGG
Sbjct: 61  MRRKDLTAISYKTSNWNELQYQNRLKSRRFYPKKKSNYRFPPFAPRNTTSFLIRAKRSGG 120

Query: 124 IASLVSPYPVTPAVLPTPIFSPLREVLVDMAKEEWGLDGYGSMKGLIRLRSAKXXXXXXX 183
           IASLVSPYPVTPAVLPTPIFSPLREVLVDMAKEEWGLDGYGSMKGLIRLRSAKXXXXXXX
Sbjct: 121 IASLVSPYPVTPAVLPTPIFSPLREVLVDMAKEEWGLDGYGSMKGLIRLRSAKXXXXXXX 180

Query: 184 XXXXXXXXXXXXXDVEGHLEVERRLDHDLSRFEMICPTSVGEEQSTLLENRVDDRDCHIS 243
           XXXXXXXXXXXXXDVEGHLEVERRLDHDLSRFEMICPTSVGEEQSTLLENRVDDRDCHIS
Sbjct: 181 XXXXXXXXXXXXXDVEGHLEVERRLDHDLSRFEMICPTSVGEEQSTLLENRVDDRDCHIS 240

Query: 244 QLEEENLTLKERVFFMERELEDLRRRVQCLETEGWRFHLMDNNKEETAASENAFDNGGND 303
           QLEEENLTLKERVFFMERELEDLRRRVQCLETEGWRFHLMDNNKEETAASENAFDNGGND
Sbjct: 241 QLEEENLTLKERVFFMERELEDLRRRVQCLETEGWRFHLMDNNKEETAASENAFDNGGND 300

Query: 304 LACSEKSINDIGNE 318
           LACSEKSINDIGNE
Sbjct: 301 LACSEKSINDIGNE 314

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BLAST of CsaV3_7G031440 vs. NCBI nr
Match: XP_022144844.1 (uncharacterized protein LOC111014426 [Momordica charantia])

HSP 1 Score: 495.4 bits (1274), Expect = 1.5e-136
Identity = 269/318 (84.59%), Postives = 279/318 (87.74%), Query Frame = 0


Query: 1   MNDMDHTQILMNHNFVVWTQPPNLPPVLPLENRGKFLQASQRSLSTPSTSIHGRCFRKGK 60
           MNDMD  QILMN NFVVWTQP   PP+LPLENRG FLQ SQRSLS+  T   GR FRKGK
Sbjct: 1   MNDMDRAQILMNRNFVVWTQP---PPLLPLENRGMFLQGSQRSLSSAPTVNQGRGFRKGK 60

Query: 61  RPDMRRKDLTAISYKTSNWNELQYQNRLKSRRFYPKKKSNYRFPPFAPRNTTSFLIRAKR 120
           RPD+RRKD  A  YK SNWNELQY NRLKSRRFYPKKKSNYRFPPFAPRNTTSFLIRAKR
Sbjct: 61  RPDVRRKDSVATPYKPSNWNELQYPNRLKSRRFYPKKKSNYRFPPFAPRNTTSFLIRAKR 120

Query: 121 SGGIASLVSPYPVTPAVLPTPIFSPLREVLVDMAKEEWGLDGYGSMKGLIRLRSAKXXXX 180
           SGGIASLVSPYPVTPAVLPTPIFSPLREVLVDMAKEEWG+DGYGSMKGLIRLRS+K    
Sbjct: 121 SGGIASLVSPYPVTPAVLPTPIFSPLREVLVDMAKEEWGVDGYGSMKGLIRLRSSK---D 180

Query: 181 XXXXXXXXXXXXXXXXDVEGHLEVERRLDHDLSRFEMICPTSVGEEQSTLLENRVDDRDC 240
             XXXXXXXXXX    DVEGHLEVERRLDHDLSRFEMICPTS GEEQSTLLE+RVDD+D 
Sbjct: 181 YEXXXXXXXXXXSGDSDVEGHLEVERRLDHDLSRFEMICPTSGGEEQSTLLESRVDDQDS 240

Query: 241 HISQLEEENLTLKERVFFMERELEDLRRRVQCLETEGWRFHLMD-NNKEETAASENAFDN 300
           HI+QLEEENLTLKERVFFMERELEDLRRRVQCLETEGWR H +D NNKEETAASENAF+N
Sbjct: 241 HIAQLEEENLTLKERVFFMERELEDLRRRVQCLETEGWRLHPVDNNNKEETAASENAFEN 300

Query: 301 GGNDLACSEKSINDIGNE 318
           GG   ACSE SINDIGNE
Sbjct: 301 GGIGHACSETSINDIGNE 312

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BLAST of CsaV3_7G031440 vs. NCBI nr
Match: XP_023004767.1 (uncharacterized protein LOC111497971 [Cucurbita maxima])

HSP 1 Score: 426.0 bits (1094), Expect = 1.1e-115
Identity = 245/308 (79.55%), Postives = 258/308 (83.77%), Query Frame = 0


Query: 11  MNHNFVVWTQPPNLPPVLPLENRGKFLQASQRSLSTPSTSIHGRCFRKGKRPDMRRKDLT 70
           MN N VVW  PPNLPPVLPLENRG FL  SQR LST  TS  GRC RKG+  DMRRK   
Sbjct: 1   MNQNSVVWIHPPNLPPVLPLENRGMFLHGSQRLLSTAPTSNQGRCLRKGRWFDMRRKGSI 60

Query: 71  AISYKTSNWNELQYQNRLKSRRFYPKKKSNYRFPPFAPRNTTSFLIRAKRSGGIASLVSP 130
           + +YK SNWNELQYQNRLKSRRF+PKKK NYRFPPFAPRNTTSFLIRAKRSGGIASLVSP
Sbjct: 61  SSAYKPSNWNELQYQNRLKSRRFHPKKKCNYRFPPFAPRNTTSFLIRAKRSGGIASLVSP 120

Query: 131 YPVTPAVLPTPIFSPLREVLVDMAKEEWGLDGYGSMKGLIRLRSAKXXXXXXXXXXXXXX 190
           YPVTPAVLPTPIFSPLREVLVDMAKEEWGLDGYGSMKGLIRLR       XXXXXXXXXX
Sbjct: 121 YPVTPAVLPTPIFSPLREVLVDMAKEEWGLDGYGSMKGLIRLR-------XXXXXXXXXX 180

Query: 191 XXXXXXDVEGHLEVERRLDHDLSRFEMICPTSVGEEQSTLLENRVDDRDCHISQLEEENL 250
           XXXXXX  EGHLEVERRLDHDLSRFEMICP S GEEQS++LE+RVDD+D HI+QL+EENL
Sbjct: 181 XXXXXXXXEGHLEVERRLDHDLSRFEMICPISGGEEQSSVLESRVDDQDSHIAQLQEENL 240

Query: 251 TLKERVFFMERELEDLRRRVQCLETEGWRFHLMD-NNKEETAASENAFDNGGNDLACSEK 310
           TLKERVFFMERELE+LRRRVQ LETEG    LMD NNK+ETA SENA DNG     C +K
Sbjct: 241 TLKERVFFMERELEELRRRVQFLETEGC---LMDNNNKDETAVSENASDNGCIGHGCKKK 298

Query: 311 SINDIGNE 318
             N IGNE
Sbjct: 301 ITNHIGNE 298

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BLAST of CsaV3_7G031440 vs. NCBI nr
Match: XP_023513478.1 (uncharacterized protein LOC111778071 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 426.0 bits (1094), Expect = 1.1e-115
Identity = 247/309 (79.94%), Postives = 260/309 (84.14%), Query Frame = 0


Query: 11  MNHNFVVWTQPPNLPPVLPLENRGKFLQASQRSLSTPSTSIHGRCFRKGKRPDMRRKDLT 70
           MN N VVW  PPNLPPVLPLENRG FL  SQR LST  TS  GRC RKG+  DMRRK   
Sbjct: 1   MNQNSVVWIHPPNLPPVLPLENRGMFLHGSQRLLSTAPTSNQGRCLRKGRWLDMRRKGSI 60

Query: 71  AISYKTSNWNELQYQNRLKSRRFYPKKKSNYRFPPFAPRNTTSFLIRAKRSGGIASLVSP 130
           + +YK SNWNELQYQNRLKSRRF+PKKK NYRFPPFAPRNTTSFLIRAKRSGGIASLVSP
Sbjct: 61  SSAYKPSNWNELQYQNRLKSRRFHPKKKCNYRFPPFAPRNTTSFLIRAKRSGGIASLVSP 120

Query: 131 YPVTPAVLPTPIFSPLREVLVDMAKEEWGLDGYGSMKGLIRLRSAKXXXXXXXXXXXXXX 190
           YPVTPAVLPTPIFSPLREVLVDMAKEEWGLDGYGSMKGLIRLR       XXXXXXXXXX
Sbjct: 121 YPVTPAVLPTPIFSPLREVLVDMAKEEWGLDGYGSMKGLIRLR-------XXXXXXXXXX 180

Query: 191 XXXXXXDVEGHLEVERRLDHDLSRFEMICPTSVGEEQSTLLENRVDDRDCHISQLEEENL 250
           XXXXXX  EGHLEVERRLDHDLSRFEMICP S GEEQS++LE+RVDD+D HI+QL+EENL
Sbjct: 181 XXXXXXXXEGHLEVERRLDHDLSRFEMICPISGGEEQSSVLESRVDDQDSHIAQLQEENL 240

Query: 251 TLKERVFFMERELEDLRRRVQCLETEGWRFHLMD-NNKEETAASENAFDNGGNDLACSEK 310
           TLKERVFFMERELE+LRRRVQ LETEG    LMD NNK+ETAASENA DNG     C +K
Sbjct: 241 TLKERVFFMERELEELRRRVQFLETEGC---LMDNNNKDETAASENASDNGCIGHGCKKK 299

Query: 311 SI-NDIGNE 318
            I N IGNE
Sbjct: 301 KITNHIGNE 299

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BLAST of CsaV3_7G031440 vs. NCBI nr
Match: XP_022960533.1 (uncharacterized protein LOC111461244 [Cucurbita moschata])

HSP 1 Score: 422.9 bits (1086), Expect = 9.4e-115
Identity = 243/308 (78.90%), Postives = 258/308 (83.77%), Query Frame = 0


Query: 11  MNHNFVVWTQPPNLPPVLPLENRGKFLQASQRSLSTPSTSIHGRCFRKGKRPDMRRKDLT 70
           MN N VVW  PPNLPPVLPLENRG FL  SQR LST  TS  GRC RKG+  DM+RK   
Sbjct: 1   MNQNSVVWLHPPNLPPVLPLENRGMFLHGSQRLLSTAPTSNQGRCLRKGRWLDMKRKGSI 60

Query: 71  AISYKTSNWNELQYQNRLKSRRFYPKKKSNYRFPPFAPRNTTSFLIRAKRSGGIASLVSP 130
           + +YK SNWNELQYQNRLKSRRF+PKKK NYRFPPFAPRNTTSFLIRAKRSGGIASLVSP
Sbjct: 61  SSAYKPSNWNELQYQNRLKSRRFHPKKKCNYRFPPFAPRNTTSFLIRAKRSGGIASLVSP 120

Query: 131 YPVTPAVLPTPIFSPLREVLVDMAKEEWGLDGYGSMKGLIRLRSAKXXXXXXXXXXXXXX 190
            PVTPAVLPTPIFSPLREVLVDMAKEEWGLDGYGSMKGLIRLR       XXXXXXXXXX
Sbjct: 121 NPVTPAVLPTPIFSPLREVLVDMAKEEWGLDGYGSMKGLIRLR-------XXXXXXXXXX 180

Query: 191 XXXXXXDVEGHLEVERRLDHDLSRFEMICPTSVGEEQSTLLENRVDDRDCHISQLEEENL 250
           XXXXXX  EGHLEVERRLDHDLSRFEMICP S GEEQS++LE+RVDD+D HI+QL+EENL
Sbjct: 181 XXXXXXXXEGHLEVERRLDHDLSRFEMICPISGGEEQSSVLESRVDDQDSHIAQLQEENL 240

Query: 251 TLKERVFFMERELEDLRRRVQCLETEGWRFHLMD-NNKEETAASENAFDNGGNDLACSEK 310
           TLKERVFFMERELE+LRRRVQ LETEG    LMD NNK+ETAASENA DNG     C +K
Sbjct: 241 TLKERVFFMERELEELRRRVQFLETEGC---LMDNNNKDETAASENASDNGCIGHGCKKK 298

Query: 311 SINDIGNE 318
             N +GNE
Sbjct: 301 ITNHVGNE 298

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BLAST of CsaV3_7G031440 vs. TAIR10
Match: AT5G19900.1 (PRLI-interacting factor, putative)

HSP 1 Score: 263.5 bits (672), Expect = 1.7e-70
Identity = 144/234 (61.54%), Postives = 164/234 (70.09%), Query Frame = 0


Query: 74  YKTSNWNELQYQNRLKSRRFYPKKKSNYRFPPFAPRNTTSFLIRAKRSGGIASLVSPYPV 133
           YK    NELQ QNRLK+R+FYPKKK   R+ P+APRNTTSF+IRAK+SGGIA LVSP PV
Sbjct: 152 YKPPTLNELQSQNRLKTRKFYPKKKYGNRYVPYAPRNTTSFIIRAKKSGGIAELVSPCPV 211

Query: 134 TPAVLPTPIFSPLREVLVDMAKEEWGLDGYGSMKGLIRLRSAKXXXXXXXXXXXXXXXXX 193
           TPAVLPTP+FSP REVL DMAKEEWG+DGYGSMKGLIRLR A                  
Sbjct: 212 TPAVLPTPMFSPSREVLGDMAKEEWGVDGYGSMKGLIRLR-ADGNELEPYEEDDEDEGGS 271

Query: 194 XXXDVEGHLEVERRLDHDLSRFEMICPTSVGEEQSTLLENRVDDRDCHISQLEEENLTLK 253
              DVE H+EVERRLDHDLSRFEMI P   G E + +LENRVDD+D HI+QLEEENLTLK
Sbjct: 272 SESDVEEHVEVERRLDHDLSRFEMIYPNYGGSEYNNVLENRVDDQDSHIAQLEEENLTLK 331

Query: 254 ERVFFMERELEDLRRRVQCLETEGWRFHLMDNNKEETAASENAFDNGGNDLACS 308
           ER+F MEREL D+RRR+Q LE         +    E  +  +  D GG+D   S
Sbjct: 332 ERLFLMERELGDMRRRLQYLERRDMVAQDANEEVVENESESDGDDTGGSDARTS 384

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BLAST of CsaV3_7G031440 vs. TrEMBL
Match: tr|A0A0A0K9V7|A0A0A0K9V7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G429530 PE=4 SV=1)

HSP 1 Score: 589.0 bits (1517), Expect = 6.6e-165
Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0


Query: 4   MDHTQILMNHNFVVWTQPPNLPPVLPLENRGKFLQASQRSLSTPSTSIHGRCFRKGKRPD 63
           MDHTQILMNHNFVVWTQPPNLPPVLPLENRGKFLQASQRSLSTPSTSIHGRCFRKGKRPD
Sbjct: 1   MDHTQILMNHNFVVWTQPPNLPPVLPLENRGKFLQASQRSLSTPSTSIHGRCFRKGKRPD 60

Query: 64  MRRKDLTAISYKTSNWNELQYQNRLKSRRFYPKKKSNYRFPPFAPRNTTSFLIRAKRSGG 123
           MRRKDLTAISYKTSNWNELQYQNRLKSRRFYPKKKSNYRFPPFAPRNTTSFLIRAKRSGG
Sbjct: 61  MRRKDLTAISYKTSNWNELQYQNRLKSRRFYPKKKSNYRFPPFAPRNTTSFLIRAKRSGG 120

Query: 124 IASLVSPYPVTPAVLPTPIFSPLREVLVDMAKEEWGLDGYGSMKGLIRLRSAKXXXXXXX 183
           IASLVSPYPVTPAVLPTPIFSPLREVLVDMAKEEWGLDGYGSMKGLIRLRSAKXXXXXXX
Sbjct: 121 IASLVSPYPVTPAVLPTPIFSPLREVLVDMAKEEWGLDGYGSMKGLIRLRSAKXXXXXXX 180

Query: 184 XXXXXXXXXXXXXDVEGHLEVERRLDHDLSRFEMICPTSVGEEQSTLLENRVDDRDCHIS 243
           XXXXXXXXXXXXXDVEGHLEVERRLDHDLSRFEMICPTSVGEEQSTLLENRVDDRDCHIS
Sbjct: 181 XXXXXXXXXXXXXDVEGHLEVERRLDHDLSRFEMICPTSVGEEQSTLLENRVDDRDCHIS 240

Query: 244 QLEEENLTLKERVFFMERELEDLRRRVQCLETEGWRFHLMDNNKEETAASENAFDNGGND 303
           QLEEENLTLKERVFFMERELEDLRRRVQCLETEGWRFHLMDNNKEETAASENAFDNGGND
Sbjct: 241 QLEEENLTLKERVFFMERELEDLRRRVQCLETEGWRFHLMDNNKEETAASENAFDNGGND 300

Query: 304 LACSEKSINDIGNE 318
           LACSEKSINDIGNE
Sbjct: 301 LACSEKSINDIGNE 314

[Close]

BLAST of CsaV3_7G031440 vs. TrEMBL
Match: tr|A5C177|A5C177_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_033019 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 1.9e-87
Identity = 216/323 (66.87%), Postives = 242/323 (74.92%), Query Frame = 0


Query: 4   MDHTQILMNHNFVVWTQPPNLPPVLPLENRGKFLQASQRSLSTPSTSIHGRCFRKGKRPD 63
           MD +Q+L N N+V W  PP  PPV PLE   KF QASQR +   +T+  GR   KGK+ D
Sbjct: 8   MDQSQML-NRNYVAW--PP--PPVPPLEEPIKF-QASQRPVFA-ATAKPGRGNWKGKKSD 67

Query: 64  ----MRRKDL----TAIS-----YKTSNWNELQYQNRLKSRRFYPKKKSNYRFPPFAPRN 123
               +RRKD     TA++     Y   N NELQ QNRLK+RRFYPKKK N RF PFAPRN
Sbjct: 68  KRKEIRRKDPLGLGTAVAGGVGGYMPPNLNELQSQNRLKARRFYPKKKFNNRFAPFAPRN 127

Query: 124 TTSFLIRAKRSGGIASLVSPYPVTPAVLPTPIFSPLREVLVDMAKEEWGLDGYGSMKGLI 183
           TTSF+IRAK+SGGIASLVSP PVTPA+LPTPIFSP REVLVDMAKEEWG+DGYGSMKGLI
Sbjct: 128 TTSFIIRAKKSGGIASLVSPCPVTPAILPTPIFSPSREVLVDMAKEEWGVDGYGSMKGLI 187

Query: 184 RLRSAKXXXXXXXXXXXXXXXXXXXXDVEGHLEVERRLDHDLSRFEMICPTSVGEEQSTL 243
           RLRS          XXXXXXXXXXXXDVE H+EVERRLDHDLSRFEMI P +  +EQ+ L
Sbjct: 188 RLRS---PGHEARDXXXXXXXXXXXXDVEEHVEVERRLDHDLSRFEMIYP-NCSDEQTNL 247

Query: 244 LENRVDDRDCHISQLEEENLTLKERVFFMERELEDLRRRVQCLETEGWRFHLMDNNKEET 303
           LENRVDD+D HI+QLEEENLTLKER+F MEREL DLRRRV CLET+G R  L +NN+E  
Sbjct: 248 LENRVDDQDTHIAQLEEENLTLKERLFLMERELADLRRRVHCLETDGGR--LRENNEE-- 307

Query: 304 AASENAFDNGGNDLACSEKSIND 314
            ASENA DN G    CSEKS+ D
Sbjct: 308 -ASENASDNEGGGDVCSEKSVGD 314

[Close]

BLAST of CsaV3_7G031440 vs. TrEMBL
Match: tr|F6HPT1|F6HPT1_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0156g00220 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 1.9e-87
Identity = 216/323 (66.87%), Postives = 242/323 (74.92%), Query Frame = 0


Query: 4   MDHTQILMNHNFVVWTQPPNLPPVLPLENRGKFLQASQRSLSTPSTSIHGRCFRKGKRPD 63
           MD +Q+L N N+V W  PP  PPV PLE   KF QASQR +   +T+  GR   KGK+ D
Sbjct: 8   MDQSQML-NRNYVAW--PP--PPVPPLEEPIKF-QASQRPVFA-ATAKPGRGNWKGKKSD 67

Query: 64  ----MRRKDL----TAIS-----YKTSNWNELQYQNRLKSRRFYPKKKSNYRFPPFAPRN 123
               +RRKD     TA++     Y   N NELQ QNRLK+RRFYPKKK N RF PFAPRN
Sbjct: 68  KRKEIRRKDPLGLGTAVAGGVGGYMPPNLNELQSQNRLKARRFYPKKKFNNRFAPFAPRN 127

Query: 124 TTSFLIRAKRSGGIASLVSPYPVTPAVLPTPIFSPLREVLVDMAKEEWGLDGYGSMKGLI 183
           TTSF+IRAK+SGGIASLVSP PVTPA+LPTPIFSP REVLVDMAKEEWG+DGYGSMKGLI
Sbjct: 128 TTSFIIRAKKSGGIASLVSPCPVTPAILPTPIFSPSREVLVDMAKEEWGVDGYGSMKGLI 187

Query: 184 RLRSAKXXXXXXXXXXXXXXXXXXXXDVEGHLEVERRLDHDLSRFEMICPTSVGEEQSTL 243
           RLRS          XXXXXXXXXXXXDVE H+EVERRLDHDLSRFEMI P +  +EQ+ L
Sbjct: 188 RLRS---PGHEARDXXXXXXXXXXXXDVEEHVEVERRLDHDLSRFEMIYP-NCSDEQTNL 247

Query: 244 LENRVDDRDCHISQLEEENLTLKERVFFMERELEDLRRRVQCLETEGWRFHLMDNNKEET 303
           LENRVDD+D HI+QLEEENLTLKER+F MEREL DLRRRV CLET+G R  L +NN+E  
Sbjct: 248 LENRVDDQDTHIAQLEEENLTLKERLFLMERELADLRRRVHCLETDGGR--LRENNEE-- 307

Query: 304 AASENAFDNGGNDLACSEKSIND 314
            ASENA DN G    CSEKS+ D
Sbjct: 308 -ASENASDNEGGGDVCSEKSVGD 314

[Close]

BLAST of CsaV3_7G031440 vs. TrEMBL
Match: tr|A0A1U8AFU4|A0A1U8AFU4_NELNU (uncharacterized protein LOC104603555 OS=Nelumbo nucifera OX=4432 GN=LOC104603555 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.0e-69
Identity = 160/203 (78.82%), Postives = 172/203 (84.73%), Query Frame = 0


Query: 74  YKTSNWNELQYQNRLKSRRFYPKKKSNYRFPPFAPRNTTSFLIRAKRSGGIASLVSPYPV 133
           YK    +ELQ QNRLK+RRFYPKKK N RF PFAPRNTTSF+IRAK+SGGIASLVSP PV
Sbjct: 90  YKPPTLHELQSQNRLKARRFYPKKKFN-RFAPFAPRNTTSFIIRAKKSGGIASLVSPCPV 149

Query: 134 TPAVLPTPIFSPLREVLVDMAKEEWGLDGYGSMKGLIRLRSAKXXXXXXXXXXXXXXXXX 193
           TPA+LPTPIFSP REVLVDMAKEEWGLDGYGSMKGLIRLRS          XXXXXXXXX
Sbjct: 150 TPAILPTPIFSPSREVLVDMAKEEWGLDGYGSMKGLIRLRS---PGHEVRDXXXXXXXXX 209

Query: 194 XXXDVEGHLEVERRLDHDLSRFEMICPTSVGEEQSTLLENRVDDRDCHISQLEEENLTLK 253
           XXXDVE H+EVERRLDHDLSRFEMI P    +E + LLENRVDD+D HI+QLEEENLTLK
Sbjct: 210 XXXDVEEHVEVERRLDHDLSRFEMIYPNGT-DENANLLENRVDDQDTHIAQLEEENLTLK 269

Query: 254 ERVFFMERELEDLRRRVQCLETE 277
           ER+F MEREL DLRRR+QCLETE
Sbjct: 270 ERLFLMERELVDLRRRLQCLETE 287

[Close]

BLAST of CsaV3_7G031440 vs. TrEMBL
Match: tr|W9QYD8|W9QYD8_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018427 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.4e-69
Identity = 183/325 (56.31%), Postives = 215/325 (66.15%), Query Frame = 0


Query: 11  MNHNFVVWTQPPNLPPVLPLENRGKFLQASQRSLSTPSTSIHGRCFRKGKRPDMRRKDLT 70
           MN  +  W QP       P  +  K  Q S +     + S  GR   KGK+   +R+DL 
Sbjct: 87  MNRGYKAWLQPQQ-----PSMDPNKKFQGSMK--PNFAASKPGRNNWKGKKGTDKRQDLR 146

Query: 71  AI-----------------SYKTSNWNELQYQNRLKSRRFYPKKKSNYRFPPFAPRNTTS 130
            I                  Y     +ELQ QNRLK+R+FYPKKK N RF P+APRNTTS
Sbjct: 147 RIENLAPNPSMSGTTSSGGGYIPPTLHELQSQNRLKARKFYPKKKFNNRFAPYAPRNTTS 206

Query: 131 FLIRAKRSGGIASLVSPYPVTPAVLPTPIFSPLREVLVDMAKEEWGLDGYGSMKGLIRLR 190
           F+IRAK+SGGIASLVSP PVTPAVLPTPIFSP REVL DMAKEEWG+DGYGSMKGLIRLR
Sbjct: 207 FIIRAKKSGGIASLVSPCPVTPAVLPTPIFSPSREVLGDMAKEEWGVDGYGSMKGLIRLR 266

Query: 191 SAKXXXXXXXXXXXXXXXXXXXXDVEGHLEVERRLDHDLSRFEMICPTSVGEEQSTLLEN 250
           S       XXXXXXXXXXXXXXX VE H+EVERRLDHDLSRFEMI P   G E + +LEN
Sbjct: 267 S----PGNXXXXXXXXXXXXXXXXVEEHVEVERRLDHDLSRFEMIYPNYSGMEYNNVLEN 326

Query: 251 RVDDRDCHISQLEEENLTLKERVFFMERELEDLRRRVQCLETEGWRFHLMDNNKEETAAS 310
           RVDD+D HI+QLEEENLTLKER+F MEREL DLRRR+Q LE +    H++ +  EE   +
Sbjct: 327 RVDDQDTHIAQLEEENLTLKERLFLMERELGDLRRRLQFLERQN---HMVGDVHEEVVEN 386

Query: 311 ENAFD----NGGNDLACSEKSINDI 315
           E+  D    +G  D+  S K+  ++
Sbjct: 387 ESENDSEGGSGAPDMCLSGKNHEEV 397

The following BLAST results are available for this feature:

BLAST of CsaV3_7G031440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136108.1	9.9e-165	100.00	PREDICTED: uncharacterized protein LOC101208199 [Cucumis sativus] >KGN45167.1 hy...	[more]
XP_022144844.1	1.5e-136	84.59	uncharacterized protein LOC111014426 [Momordica charantia]	[more]
XP_023004767.1	1.1e-115	79.55	uncharacterized protein LOC111497971 [Cucurbita maxima]	[more]
XP_023513478.1	1.1e-115	79.94	uncharacterized protein LOC111778071 [Cucurbita pepo subsp. pepo]	[more]
XP_022960533.1	9.4e-115	78.90	uncharacterized protein LOC111461244 [Cucurbita moschata]	[more]

BLAST of CsaV3_7G031440 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G19900.1	1.7e-70	61.54	PRLI-interacting factor, putative	[more]

BLAST of CsaV3_7G031440 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_7G031440 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K9V7\|A0A0A0K9V7_CUCSA	6.6e-165	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G429530 PE=4 SV=1	[more]
tr\|A5C177\|A5C177_VITVI	1.9e-87	66.87	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_033019 PE=4 SV=1	[more]
tr\|F6HPT1\|F6HPT1_VITVI	1.9e-87	66.87	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0156g00220 PE=4 SV=...	[more]
tr\|A0A1U8AFU4\|A0A1U8AFU4_NELNU	1.0e-69	78.82	uncharacterized protein LOC104603555 OS=Nelumbo nucifera OX=4432 GN=LOC104603555...	[more]
tr\|W9QYD8\|W9QYD8_9ROSA	1.4e-69	56.31	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018427 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G031440.1	CsaV3_7G031440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 242..276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 291..317
None	No IPR available	PANTHER	PTHR34484	FAMILY NOT NAMED	coord: 39..301

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_7G031440	CSPI07G19620	Wild cucumber (PI 183967)	cpicucB414
CsaV3_7G031440	Cucsa.049990	Cucumber (Gy14) v1	cgycucB033
CsaV3_7G031440	CmaCh02G012190	Cucurbita maxima (Rimu)	cmacucB0771
CsaV3_7G031440	CmaCh08G005570	Cucurbita maxima (Rimu)	cmacucB1084
CsaV3_7G031440	CmaCh20G000520	Cucurbita maxima (Rimu)	cmacucB0688
CsaV3_7G031440	CmoCh20G000560	Cucurbita moschata (Rifu)	cmocucB0673
CsaV3_7G031440	CmoCh08G005490	Cucurbita moschata (Rifu)	cmocucB1066
CsaV3_7G031440	CmoCh02G012540	Cucurbita moschata (Rifu)	cmocucB0755
CsaV3_7G031440	Cp4.1LG16g09050	Cucurbita pepo (Zucchini)	cpecucB0369
CsaV3_7G031440	Cp4.1LG05g05160	Cucurbita pepo (Zucchini)	cpecucB0948
CsaV3_7G031440	Cp4.1LG17g08490	Cucurbita pepo (Zucchini)	cpecucB0422
CsaV3_7G031440	Carg13471	Silver-seed gourd	carcucB0486
CsaV3_7G031440	Carg06928	Silver-seed gourd	carcucB0561
CsaV3_7G031440	Carg02742	Silver-seed gourd	carcucB0968
CsaV3_7G031440	Cla015277	Watermelon (97103) v1	cucwmB591
CsaV3_7G031440	Cla003199	Watermelon (97103) v1	cucwmB631
CsaV3_7G031440	MELO3C023513	Melon (DHL92) v3.5.1	cucmeB537
CsaV3_7G031440	ClCG02G023720	Watermelon (Charleston Gray)	cucwcgB568
CsaV3_7G031440	ClCG09G003790	Watermelon (Charleston Gray)	cucwcgB546
CsaV3_7G031440	MELO3C023513.2	Melon (DHL92) v3.6.1	cucmedB525
CsaV3_7G031440	Cla97C02G049820	Watermelon (97103) v2	cucwmbB547
CsaV3_7G031440	Cla97C09G166030	Watermelon (97103) v2	cucwmbB592
CsaV3_7G031440	Bhi09G000485	Wax gourd	cucwgoB730

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_7G031440	Cucumber (Chinese Long) v3	cuccucB060
CsaV3_7G031440	Cucumber (Chinese Long) v3	cuccucB154
CsaV3_7G031440	Silver-seed gourd	carcucB0390
CsaV3_7G031440	Silver-seed gourd	carcucB0505
CsaV3_7G031440	Cucumber (Gy14) v2	cgybcucB054
CsaV3_7G031440	Cucumber (Gy14) v2	cgybcucB154
CsaV3_7G031440	Cucumber (Gy14) v2	cgybcucB347
CsaV3_7G031440	Cucumber (Gy14) v1	cgycucB216
CsaV3_7G031440	Cucurbita maxima (Rimu)	cmacucB0462
CsaV3_7G031440	Cucurbita maxima (Rimu)	cmacucB0595
CsaV3_7G031440	Cucurbita moschata (Rifu)	cmocucB0087
CsaV3_7G031440	Cucurbita moschata (Rifu)	cmocucB0166
CsaV3_7G031440	Cucurbita moschata (Rifu)	cmocucB0455
CsaV3_7G031440	Cucurbita moschata (Rifu)	cmocucB0582
CsaV3_7G031440	Cucurbita pepo (Zucchini)	cpecucB0188
CsaV3_7G031440	Cucurbita pepo (Zucchini)	cpecucB0469
CsaV3_7G031440	Cucurbita pepo (Zucchini)	cpecucB0726
CsaV3_7G031440	Wild cucumber (PI 183967)	cpicucB064
CsaV3_7G031440	Wild cucumber (PI 183967)	cpicucB191
CsaV3_7G031440	Bottle gourd (USVL1VR-Ls)	cuclsiB538
CsaV3_7G031440	Bottle gourd (USVL1VR-Ls)	cuclsiB566
CsaV3_7G031440	Watermelon (Charleston Gray)	cucwcgB555
CsaV3_7G031440	Watermelon (Charleston Gray)	cucwcgB581
CsaV3_7G031440	Watermelon (97103) v1	cucwmB610
CsaV3_7G031440	Watermelon (97103) v2	cucwmbB558