CmoCh16G004580 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTTCACACTCCGAATCACAAATCAAATCCCCTTCTTAAACCTCTCTCAACTTGATCCACTTGTTCCCCAAGGAACCTTATTCCTTCTCCATTGTTCTTCCGGCAAATTTTCTTTCAAATTCCGAGGGATTTTTCAGAGATTGAAGGGGCTGTGATTCTCCTCAAACCAGGTAGGAGGGGAAGTTGTTCTTTCTTTTTTTTCTTGTTTTCTGGGCTTTTTCGACGGGGATTCAGTGATGATGAATAGGTTTTAGAGGATTCGGGAGAAAGTGAGATTTTCTTCGGTGAAAAGAGTATGAAGATTCAGTGCAATGTCTGCGAGATGGCTGAGGCGACCGTTCTGTGTTGTGCTGATGAGGCGGCGCTGTGCTGGGCTTGCGATGAGAAGATTCATGCGGCCAACAAGCTTGCAAGCAAGCACCAGAGAGTTCCTCTCTCTGATTCTTCATCTCAGATGCCCAAATGCGACATCTGCCAGGTATGTGCTGTAATTAGCTACTCTCTGTTACAAGCAAGCACCACACCAGGGAGTTGTGATGTGGAATCAACCTTTTGTGTTCATACTTAGTGGAGATTAAAGCTTCTATGATAATTTTTTTATTGTGTTACCATGAAATGAGTTCCATAGGCTGAAATAGAATGATTGCATATCCACTCAAGATAAAAGATCAAGGAGTACTTGAATCTGTTGCCAAATCTCACGAGCTTGACCATGTTTTTCTTTAAAATTTCTTCTAGATTTCTGTTTCCAGATCTACTGATGAAGGAAAGAAAAGTAGGTTCCAGCTCGAGATGTAGCTGTGGGCAGTTTTAGAAGTTTGAAATGCTGGCAGATAGATTTTGAATAGTTGTAAAGGCGATAAATGTTTTCTAATCTAGTAAAACAGGAAAAAGTGCCTCATATTTTAGATCAGTGACTATATGGGGAAGAGATTATGATGAGTGAATTAGCCTGCAGAAAAAACCAAGATATGGATTGATGGTATGTGCAATTGGTGATGCTGTCGTGTGTTGCATGCCGGCTTTAGTAAGTGATGATTATTAGTGTGTAGCCGCTCAAGCCTACCGCTAGCAGTATTGTCCTCTTTGGGCTTTCTCTTTCAGACTTCCCTCAAGGTTTTTAAAACGCTCTGCTAGGGAGAGGTTTCCACACCCTTATAAGAAATGCTTCGTTCCCCTCTCCAATCGATGTGGGATCTCACAATCCACCCCTTTATGGACAAAACGTCCTCACTGGCACACCACCTGGTGTCTGGCTCTGATACCATTTGTAACAACCTAAGCCCACCACTAGCAGATATTGTCCTCTTTGTGTTCCCTTTCAGTCTTCCCCTCAAGGTTTTTAAAACGCGTCTGCTAGCGAGAGATTTTCACACTCTTATAAGGAATATTTTGTTCCCTTCTCCCACCACTAGCAGATATTGTCCTCTTTGGATTTTTTCTTTCGGGCTTCCCCTCAAGGTTTTTAAAACGCGCCTGTTAGCGAGAGGTTTCCATACACTTATAAAGAATGTTTCGTTCCCCTCTCCAACCGATGGGGATTTTAAGAAACAAGCATAACCCATCTTTTCTATCTTGTGCATGCTTTCGTAGTATATTGTTATGCGTTGATGGGAGAATGTCAGCCGATGGCGAATTTCCTTTCTTTTCTTTTTTTTCAATACCCTTTATCAGTTGAGACTGTTACCCTTTCTTAATCATCTGTGATTTCTTGCAGGAAGCTAGTGGCTATATCTTTTGTTTAGAGGATCGAGCATTACTTTGCAGAAAGTGTGATGTTGCTATACACACAGCAAATACTTATGTAACTGGTCATCAGCGCTTTCTGCTTACTGGGGTGAAAGTGGCGCTTGAGCCAACTGATCCTGTTCCTTGTTCTTCCATGCCTAAGTCACATTCTCAAGTGAAACCTACTGAGACAAAAGTTAGACCTCTGTCTGAAAGGGAATTCTCGTTGCCTTCTCCTGGTGAACTCAGCAGATGCCTGTCTGTACAAGGTGGATCTGAGGACTTTATGGCAAATGGAACGTTCCATACCGGAGATGCTGTTTCTGGTGGCTTTTCACAATGGCAAATGGATGACCTTATTAATCTGACTGGATTCAATCAGAACTATGGGTTTTTGGATAACGGATCATCCAAGGTATGGTGATGGTTTTTTAATGCAATAAATTCAAAATAATGCCAACCCCATTAATTGTTTACGATTACAGAATAATGACCGTTCATAGAAGTTGATAATGCTTGTTGCTTCTGGGATTTAAAGATCTTTCTATTCCTAGGATGCCTTTCACATAGCAAACCTCTTTTATAAGTAAACGTCTAGTGTAGCCTGCATACTTTCTCCTTTTTAACTGTGTAATTATAACCGTTCAAGTCCACCACTAGTAGATATTGTCCGCTTTAGCTCGTATGGTTTTAAAATGCATCTACTAGGGAGAGGTTTCCACACTCTTGTAAGAAATGTTTTGTTCCCCTCTCCAACCGACGTGGGATCTCACAATCCACCCCTAGCGTCCTCGCTGGCGCAATACCCGGTGTCTGGCTCTAATACCATTTGTGACGGTCCAAGCCCACCACTAGTAGATATTGTTCGCTTTAATTCGTTACATATCGTCGTCAGCCTCACGGTTTTAAAATGCGTCTACTAGAGAGAGGTTTTCACATCCTTATAAGGAATGCTTCGTTCCTCTCTCCAACCAAGGTGGGATCTCACACTCCACCCCAGCATTCTCGTTAGCACACCGTCTGGTGTCTGGCTCTGTTACCATTTGTTGTTCAAACCCACCACTAGTAAATATTGTCCGCTTTAGCCTGTTACGTATCGCTGTCACCTTACGGTTTTAAAACACGTCTATTAGGAAGAGGTTTTCACACCCTTATAAGAAATGTTTCGTTCCCTTTTTCAAGTAATCATATCTTTTGTATTGGGATATTCTACATAAGTAATTAATTGATGACCTATAAGATGTAACTTTTGTAGGACGTTTGTAGATTGTTATGGGTTGTGGCCAAGTACTGCTAATCCTGATGCAATAACTTTCTGCTTTTCTTTATTGGTGACATATAGCAGGCTGATAGCGGCAAGCTCGGGGATTCTGATTCATCTCCAGTTTTAAGGGCTGCTGACATTGAGCTAGACGACAACGATGAATGCTCGGGTCAGGTTCCAGAGGCTTCCTGGACTGTGCCTCAGATTCCCTCCCCTCCTACAGCATCTGGCTTATACTGGCCAAGAAGTTACCATAATTCTATGGATGGTGCTGTTTTTGTTCCTGACATTTCCTGTTCTTCCGAAAAGGTTCAACATTGCTCACATAATGGTAGATTCTTGAAACGACGGAGGCAGTTCTAGATGTCCGAGCTCGATCATAGGGACTTCAATGCAAGTGTTCTGAACCTCGCTAGGTTTGTTGTGTGTTTATAGCTTTCATTTACAGTCGAATTATAATAAGTGGACACGATCAAAGATTATCGCTTGAAACGTATACCTTGTAACGTAACCACTATAGTTTAGGATTTGTTACATTGATGTAGAAATAAAACCTGCGCCATTAGTTGACCTTGTAGGTATTTTTTTTCAGATTTATTTCAAACATCTTGTGGAAATGATCGTTTCATATCACCTTGACCTACTTGATTGATTATTTGTAGTTTTACAAAAAGATTATGAAGAATCAATGTCATGTCTTAGCCATTTTTAGTTCTGTACCTCTTCTGTCATTGTAATATGTTCTGAACTCCTCTTCCTGGC AGTTCACACTCCGAATCACAAATCAAATCCCCTTCTTAAACCTCTCTCAACTTGATCCACTTGTTCCCCAAGGAACCTTATTCCTTCTCCATTGTTCTTCCGGCAAATTTTCTTTCAAATTCCGAGGGATTTTTCAGAGATTGAAGGGGCTGTGATTCTCCTCAAACCAGGTTTTAGAGGATTCGGGAGAAAGTGAGATTTTCTTCGGTGAAAAGAGTATGAAGATTCAGTGCAATGTCTGCGAGATGGCTGAGGCGACCGTTCTGTGTTGTGCTGATGAGGCGGCGCTGTGCTGGGCTTGCGATGAGAAGATTCATGCGGCCAACAAGCTTGCAAGCAAGCACCAGAGAGTTCCTCTCTCTGATTCTTCATCTCAGATGCCCAAATGCGACATCTGCCAGGAAGCTAGTGGCTATATCTTTTGTTTAGAGGATCGAGCATTACTTTGCAGAAAGTGTGATGTTGCTATACACACAGCAAATACTTATGTAACTGGTCATCAGCGCTTTCTGCTTACTGGGGTGAAAGTGGCGCTTGAGCCAACTGATCCTGTTCCTTGTTCTTCCATGCCTAAGTCACATTCTCAAGTGAAACCTACTGAGACAAAAGTTAGACCTCTGTCTGAAAGGGAATTCTCGTTGCCTTCTCCTGGTGAACTCAGCAGATGCCTGTCTGTACAAGGTGGATCTGAGGACTTTATGGCAAATGGAACGTTCCATACCGGAGATGCTGTTTCTGGTGGCTTTTCACAATGGCAAATGGATGACCTTATTAATCTGACTGGATTCAATCAGAACTATGGGTTTTTGGATAACGGATCATCCAAGGCTGATAGCGGCAAGCTCGGGGATTCTGATTCATCTCCAGTTTTAAGGGCTGCTGACATTGAGCTAGACGACAACGATGAATGCTCGGGTCAGGTTCCAGAGGCTTCCTGGACTGTGCCTCAGATTCCCTCCCCTCCTACAGCATCTGGCTTATACTGGCCAAGAAGTTACCATAATTCTATGGATGGTGCTGTTTTTGTTCCTGACATTTCCTGTTCTTCCGAAAAGGTTCAACATTGCTCACATAATGGTAGATTCTTGAAACGACGGAGGCAGTTCTAGATGTCCGAGCTCGATCATAGGGACTTCAATGCAAGTGTTCTGAACCTCGCTAGGTTTGTTGTGTGTTTATAGCTTTCATTTACAGTCGAATTATAATAAGTGGACACGATCAAAGATTATCGCTTGAAACGTATACCTTGTAACGTAACCACTATAGTTTAGGATTTGTTACATTGATGTAGAAATAAAACCTGCGCCATTAGTTGACCTTGTAGGTATTTTTTTTCAGATTTATTTCAAACATCTTGTGGAAATGATCGTTTCATATCACCTTGACCTACTTGATTGATTATTTGTAGTTTTACAAAAAGATTATGAAGAATCAATGTCATGTCTTAGCCATTTTTAGTTCTGTACCTCTTCTGTCATTGTAATATGTTCTGAACTCCTCTTCCTGGC ATGAAGATTCAGTGCAATGTCTGCGAGATGGCTGAGGCGACCGTTCTGTGTTGTGCTGATGAGGCGGCGCTGTGCTGGGCTTGCGATGAGAAGATTCATGCGGCCAACAAGCTTGCAAGCAAGCACCAGAGAGTTCCTCTCTCTGATTCTTCATCTCAGATGCCCAAATGCGACATCTGCCAGGAAGCTAGTGGCTATATCTTTTGTTTAGAGGATCGAGCATTACTTTGCAGAAAGTGTGATGTTGCTATACACACAGCAAATACTTATGTAACTGGTCATCAGCGCTTTCTGCTTACTGGGGTGAAAGTGGCGCTTGAGCCAACTGATCCTGTTCCTTGTTCTTCCATGCCTAAGTCACATTCTCAAGTGAAACCTACTGAGACAAAAGTTAGACCTCTGTCTGAAAGGGAATTCTCGTTGCCTTCTCCTGGTGAACTCAGCAGATGCCTGTCTGTACAAGGTGGATCTGAGGACTTTATGGCAAATGGAACGTTCCATACCGGAGATGCTGTTTCTGGTGGCTTTTCACAATGGCAAATGGATGACCTTATTAATCTGACTGGATTCAATCAGAACTATGGGTTTTTGGATAACGGATCATCCAAGGCTGATAGCGGCAAGCTCGGGGATTCTGATTCATCTCCAGTTTTAAGGGCTGCTGACATTGAGCTAGACGACAACGATGAATGCTCGGGTCAGGTTCCAGAGGCTTCCTGGACTGTGCCTCAGATTCCCTCCCCTCCTACAGCATCTGGCTTATACTGGCCAAGAAGTTACCATAATTCTATGGATGGTGCTGTTTTTGTTCCTGACATTTCCTGTTCTTCCGAAAAGGTTCAACATTGCTCACATAATGGTAGATTCTTGAAACGACGGAGGCAGTTCTAG
BLAST of CmoCh16G004580 vs. Swiss-Prot
Match: BBX22_ARATH (B-box zinc finger protein 22 OS=Arabidopsis thaliana GN=BBX22 PE=1 SV=2) HSP 1 Score: 294.3 bits (752), Expect = 1.5e-78 Identity = 166/311 (53.38%), Postives = 211/311 (67.85%), Query Frame = 1
BLAST of CmoCh16G004580 vs. Swiss-Prot
Match: BBX24_ARATH (B-box zinc finger protein 24 OS=Arabidopsis thaliana GN=BBX24 PE=1 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 3.8e-37 Identity = 78/141 (55.32%), Postives = 101/141 (71.63%), Query Frame = 1
BLAST of CmoCh16G004580 vs. Swiss-Prot
Match: BBX25_ARATH (B-box zinc finger protein 25 OS=Arabidopsis thaliana GN=BBX25 PE=1 SV=2) HSP 1 Score: 150.2 bits (378), Expect = 3.5e-35 Identity = 77/145 (53.10%), Postives = 100/145 (68.97%), Query Frame = 1
BLAST of CmoCh16G004580 vs. Swiss-Prot
Match: BBX23_ARATH (B-box zinc finger protein 23 OS=Arabidopsis thaliana GN=BBX23 PE=2 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 4.5e-30 Identity = 76/155 (49.03%), Postives = 96/155 (61.94%), Query Frame = 1
BLAST of CmoCh16G004580 vs. Swiss-Prot
Match: BBX21_ARATH (B-box zinc finger protein 21 OS=Arabidopsis thaliana GN=BBX21 PE=1 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 4.5e-30 Identity = 92/242 (38.02%), Postives = 124/242 (51.24%), Query Frame = 1
BLAST of CmoCh16G004580 vs. TrEMBL
Match: A0A0A0KVG2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G083550 PE=4 SV=1) HSP 1 Score: 535.0 bits (1377), Expect = 5.7e-149 Identity = 266/298 (89.26%), Postives = 276/298 (92.62%), Query Frame = 1
BLAST of CmoCh16G004580 vs. TrEMBL
Match: A0A068UCQ5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00021404001 PE=4 SV=1) HSP 1 Score: 375.2 bits (962), Expect = 7.5e-101 Identity = 197/299 (65.89%), Postives = 223/299 (74.58%), Query Frame = 1
BLAST of CmoCh16G004580 vs. TrEMBL
Match: K4CGP9_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 2.4e-99 Identity = 191/298 (64.09%), Postives = 220/298 (73.83%), Query Frame = 1
BLAST of CmoCh16G004580 vs. TrEMBL
Match: B9I1Q4_POPTR (Salt tolerance-like family protein OS=Populus trichocarpa GN=POPTR_0011s10670g PE=4 SV=1) HSP 1 Score: 364.8 bits (935), Expect = 1.0e-97 Identity = 191/300 (63.67%), Postives = 226/300 (75.33%), Query Frame = 1
BLAST of CmoCh16G004580 vs. TrEMBL
Match: A0A061F8Y4_THECC (Light-regulated zinc finger protein 1, putative isoform 1 OS=Theobroma cacao GN=TCM_032112 PE=4 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 3.9e-97 Identity = 188/297 (63.30%), Postives = 216/297 (72.73%), Query Frame = 1
BLAST of CmoCh16G004580 vs. TAIR10
Match: AT1G78600.2 (AT1G78600.2 light-regulated zinc finger protein 1) HSP 1 Score: 282.7 bits (722), Expect = 2.6e-76 Identity = 164/331 (49.55%), Postives = 209/331 (63.14%), Query Frame = 1
BLAST of CmoCh16G004580 vs. TAIR10
Match: AT1G06040.1 (AT1G06040.1 B-box zinc finger family protein) HSP 1 Score: 156.8 bits (395), Expect = 2.1e-38 Identity = 78/141 (55.32%), Postives = 101/141 (71.63%), Query Frame = 1
BLAST of CmoCh16G004580 vs. TAIR10
Match: AT2G31380.1 (AT2G31380.1 salt tolerance homologue) HSP 1 Score: 150.2 bits (378), Expect = 2.0e-36 Identity = 77/145 (53.10%), Postives = 100/145 (68.97%), Query Frame = 1
BLAST of CmoCh16G004580 vs. TAIR10
Match: AT4G10240.1 (AT4G10240.1 B-box zinc finger family protein) HSP 1 Score: 133.3 bits (334), Expect = 2.5e-31 Identity = 76/155 (49.03%), Postives = 96/155 (61.94%), Query Frame = 1
BLAST of CmoCh16G004580 vs. TAIR10
Match: AT1G75540.1 (AT1G75540.1 salt tolerance homolog2) HSP 1 Score: 133.3 bits (334), Expect = 2.5e-31 Identity = 92/242 (38.02%), Postives = 124/242 (51.24%), Query Frame = 1
BLAST of CmoCh16G004580 vs. NCBI nr
Match: gi|659101673|ref|XP_008451731.1| (PREDICTED: probable salt tolerance-like protein At1g78600 [Cucumis melo]) HSP 1 Score: 540.4 bits (1391), Expect = 1.9e-150 Identity = 270/298 (90.60%), Postives = 278/298 (93.29%), Query Frame = 1
BLAST of CmoCh16G004580 vs. NCBI nr
Match: gi|449438905|ref|XP_004137228.1| (PREDICTED: B-box zinc finger protein 22 [Cucumis sativus]) HSP 1 Score: 535.0 bits (1377), Expect = 8.1e-149 Identity = 266/298 (89.26%), Postives = 276/298 (92.62%), Query Frame = 1
BLAST of CmoCh16G004580 vs. NCBI nr
Match: gi|1009162144|ref|XP_015899277.1| (PREDICTED: B-box zinc finger protein 22 [Ziziphus jujuba]) HSP 1 Score: 384.4 bits (986), Expect = 1.8e-103 Identity = 201/298 (67.45%), Postives = 227/298 (76.17%), Query Frame = 1
BLAST of CmoCh16G004580 vs. NCBI nr
Match: gi|661890555|emb|CDP06052.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 375.2 bits (962), Expect = 1.1e-100 Identity = 197/299 (65.89%), Postives = 223/299 (74.58%), Query Frame = 1
BLAST of CmoCh16G004580 vs. NCBI nr
Match: gi|460397478|ref|XP_004244294.1| (PREDICTED: B-box zinc finger protein 22 isoform X3 [Solanum lycopersicum]) HSP 1 Score: 370.2 bits (949), Expect = 3.5e-99 Identity = 191/298 (64.09%), Postives = 220/298 (73.83%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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