Carg11357 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAACCTCTCTCAACTTGATCCACTTGTTCCCCAAGGAACCTTATTCCTTCTCCATTGTTCTTCCGGCAAATTTTCTTTCAAATTCCGAGGGATTTTTCAGAGATTGAAGGGGCTGTGATTCTCCTCAAACCAGGTAGGAGGGGAAGTTGTTGTTGTTCTTCTTTTTTTTTCTTGTTTTCTGGGCTTTTTCGACGGGGATTCAGTGATGATGAATAGGTTTTAGAGGATTCGGGAGAAAGTGAGATTTTCTTCGGTGAAAAGATTATGAAGATTCAGTGCAATGTCTGCGAGATGGCTGAGGCGACCGTTCTGTGTTGTGCTGATGAGGCGGCGCTGTGCTGGGCTTGCGATGAGAAGATTCATGCGGCCAACAAGCTTGCAAGCAAGCACCAGAGAGTTCCTCTCTCTGATTCTTCATCTCAGATGCCCAAATGCGACATCTGCCAGGTATGTGCTGTAATTAGCTACTCTCTGTTACAAGCAAGCACCACACCAGGGAGTTGTGATGTGGAATCAACCTTTTGTGTTCATACTTAGTGGAGATTAAAGCTTCTATGATAATTTTTTTATTGTGTTACCATGAAATGAGTTCCATAGGCTGAAATAGAATGATTGCATATCCACTCAAGATAAAAGATCAAGGAGTACTTGAATCTGTTGCCAAATCTCACGAGCTTCACCATGTTTTTCTTTAAAATTTCTTCTAGATTTCTGTTTCCAGATCTACTGATGAAGGAAAGAAAAGTAGGTTCCAGCTCGAGATGTAGCTGTGGGCAGTTTTAGAAGTTTGAAATGCTGGCAGATAGATTTTGAATAGTTGTAAAGGCGATAAATGTTTTCTAATCTAGTAAAACAGGAAAAAGTGCCTCATATTTTAGATCAGTGACTATATGGGGAAGAGATTATGATGAGTGAATTAGCCTGCAGAAAAACCCAAGATATGGATTGATGGTATGTGCAATTGGTGATGCTGTCGTGTGCTGCATGCAGTCTTCCCCTTAAGGTTTTTAAAACGCGTATGCTAGCGAGAGATTTTCACACCCTTATAACGAATATTTCGTTCCCCTCTCCCACCACTAGTAGATATTGTCCTATTTGGGTTTTTCCTTTCGAGCTTCCCCTCAAGGTTTTTAAAACGCGTCAGTTAGCAAGAAGTTTTCATACCCTTATAAAGAATGTTTCGTTCACCTCTCCAATCGATGGGAATTTTAAGAAACATGCATAACCCATCTTATCTATCTTGTGCATGCTTTCGTAGTATATTGTTATGCATTGTTGGGAGAATGTCAGCCGATGCCGAATTTCCTTTCTTTTCTTTTTTTAAAGTACCCTTTATCAGTTGAGACTGTTACCCTTTCCTAATCATCTGTGATTTCTTGCAGGAAGCTAGTGGCTATATCTTTTGTTTAGAGGATCGTGCATTACTTTGCAGAAAGTGTGATGTTGCTATACACACAGCAAATACTTATGTAACTGGTCATCAGCGCTTTCTGCTTACTGGGGTGAAAGTGGCGCTTGAGCCAACTGATCCTGTTCCTTGTTCTTCCATGCCCAAGTCACATTCTCAAGTGAAACCTACTGAGACAAAAGTTAGACCTCTGTCTGAAAGGGAATTCTCGTTGCCTTCTCCTGGTGAACTCAGCAGATGCCTGTCTGTACAAGGTGGATCTGAGGACTTCATGGCAAATGGAACGTTCCATACCGGAGATACTGTTTCTGGTGGCTTTTCACAATGGCAAATGGATGACCTTATTAATCTGACTGGATTCAATCAGAACTATGGGTTTTTGGATAGCGGATCATCCAAGGTATGGTGATGGTTTTTTAATGCAATAAATTCAAAATGATGCCAACCCCATTAATTGTTTACGATTACAGAATAATGACCGTTCATAGAAGTTGATAATGCTTGTTGCTTCTGGGATTTAAAGAACTTTCTATTCCTAGGATGCCTCTCACGTAGCAAACCTCTTTTATAAGTAAACGTCTAGTGTAGCGTGGATACTTTCTAACTGTGTAATTATAACCGTTCAAGTCCACCATTAGTAGATATTGTGAGAAATGTTTTGTTCCCCTCTAACCGACGTGGGATCTCACAATCCACCCTCAGCGTCTTCGCTGGCGCAATACCCGGTGTCTGGCTCTGATATCATTTGTAACGGTCCAAGTCCACCATTAGTAGATATTGTTCGCTTTAATTCGTTATGTATCATCGTCAGCTTCAAGGTTCTAAAATGCGTCTACTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTCCTCTCTCCAACCGATGTGGGATCTCACAATCCACCCCAGCGTCCTCGCTGGCACACCGCCCGGTGTCTAGCTCTAATACCATTTGTAACTGTCCAAGCTCACCACTAGTAGATATTGTTCACTTTAACTTGTTATGTATCGCCGTCAGCCCACAGTTTTAAAATGCGTCTACTAGGGAGAGGTTTCCACACCCTTATAAGGAATGTTTCGTTCCCCTCTCTAACTGACGTGGGATCTCACCATCCATCCCCAGTGTCTTCCCTGGCACACCGCTCAGTGTTTGGCTCTGATACCATTTGTAATAGTCTAAGCCCACCACTAGTAGATAATGTCCACTTTAGCCCATTATGTATCGCCATCAGTCTCACGGTTTTAAAACGCGTCTACTAGGGAGAGGTTTCCACACCATTATAAAAAATGTTTCGTTCCTCTCTCCAACCGATGTGGGATCTCACAATCCACCCCAGCGGTCTCGTTGGCACACCGCCTGGTGTCTGGCTCTAATACCATTTGTTGTCCAAATCCACCACTAGTAGATATTGTCCGCTTTAGCCCGTTACGTATCGCTGTCACCTCACGGTTTTAAAACGCGTCTATTAAGGAGAGGTTTCCACACCCTTATAAGAACTGTTTCGTTCCACTTTCCAACTGATATGAGATCTTAGTAATCATATCTTTTGTATAGGGATATTCTACATAAGTAATTAATTGATGACCTATAAGATGTTACTTTTGTAGGACGTTTGTAGATTGTTATGGGTTGTGGCCAAGTACTGCTAATCCTGATGCAATAACTTTCTGCTTTTCTTTACTGGTGACATATAGCAGGCTGATAGCGGCAAGCTCGGGGATTCTGATTCATCTCCAGTTTTAAGGGCTGCTGACGTTGAGCTAGACGACAACGATGAATGCTCGGGTCAGGTTCCAGAGGCTTCCTGGACTGTGCCTCAGATTCCCTCCCCTCCCACAGCATCTGGCTTATACTGGCCAAGAAGTTACCATAATTCTATGGATGGTGCTGTTTCTGTTCCTGACATTTCCGGTTCTTCCGAAAAGGTTCAACATTGCTCACATAATGGTAGATTCTTGAAACGACGGAGGCAGTTCTAGACGTCCGAGCTCGATCATAGGGACTTCAATGCAAGTGTTCTGAACCTCGCTAGGTTTGTTGTGTGTTTATAGCTTTCATTTACAGTCGAATTATAATAAGTGGACACGATCAAAGATTATCGCTTGAAACGTATACCTTGTAACGTAACCACTATAGTTTAGGATTTGTTACATTGATGTAGAAATAAAACCTGCGCCATTAGTTGACCTTGTAGGTATTTTTTTTCAGATTTATTTCAAACATCTTGTGGAAATGATCGTTTCATATCACCTTGACCTACTTGATTGATTATTTGTAGTTCTACAAAAAGATTATGAAGAATCAATGTCATGTCTTAGCCATTTTTAGTTCTGTACCTCTTCTGTCACTGTGAATATGTTCTGAACTCCTCTTCCTGGCTGTGTACTTGAAATCTTTCTCTACTACTTCAACTGAGAGCATATTATTTCTTCACTGATGGCTTTGGCCAGGAGATGAACACTTGATGTATTGTGATGTCTCACGTTGGTTGGG TAAACCTCTCTCAACTTGATCCACTTGTTCCCCAAGGAACCTTATTCCTTCTCCATTGTTCTTCCGGCAAATTTTCTTTCAAATTCCGAGGGATTTTTCAGAGATTGAAGGGGCTGTGATTCTCCTCAAACCAGGTAGGAGGGGAAGTTTTTTCTGGGCTTTTTCGACGGGGATTCAGTGATGATGAATAGGTTTTAGAGGATTCGGGAGAAAATTATGAAGATTCAGTGCAATGTCTGCGAGATGGCTGAGGCGACCGTTCTGTGTTGTGCTGATGAGGCGGCGCTGTGCTGGGCTTGCGATGAGAAGATTCATGCGGCCAACAAGCTTGCAAGCAAGCACCAGAGAGTTCCTCTCTCTGATTCTTCATCTCAGATGCCCAAATGCGACATCTGCCAGGAAGCTAGTGGCTATATCTTTTGTTTAGAGGATCGTGCATTACTTTGCAGAAAGTGTGATGTTGCTATACACACAGCAAATACTTATGTAACTGGTCATCAGCGCTTTCTGCTTACTGGGGTGAAAGTGGCGCTTGAGCCAACTGATCCTGTTCCTTGTTCTTCCATGCCCAAGTCACATTCTCAAGTGAAACCTACTGAGACAAAAGTTAGACCTCTGTCTGAAAGGGAATTCTCGTTGCCTTCTCCTGGTGAACTCAGCAGATGCCTGTCTGTACAAGGTGGATCTGAGGACTTCATGGCAAATGGAACGTTCCATACCGGAGATACTGTTTCTGGTGGCTTTTCACAATGGCAAATGGATGACCTTATTAATCTGACTGGATTCAATCAGAACTATGGGTTTTTGGATAGCGGATCATCCAAGGCTGATAGCGGCAAGCTCGGGGATTCTGATTCATCTCCAGTTTTAAGGGCTGCTGACGTTGAGCTAGACGACAACGATGAATGCTCGGGTCAGGTTCCAGAGGCTTCCTGGACTGTGCCTCAGATTCCCTCCCCTCCCACAGCATCTGGCTTATACTGGCCAAGAAGTTACCATAATTCTATGGATGGTGCTGTTTCTGTTCCTGACATTTCCGGTTCTTCCGAAAAGGTTCAACATTGCTCACATAATGGTAGATTCTTGAAACGACGGAGGCAGTTCTAGACGTCCGAGCTCGATCATAGGGACTTCAATGCAAGTGTTCTGAACCTCGCTAGGTTTGTTGTGTGTTTATAGCTTTCATTTACAGTCGAATTATAATAAGTGGACACGATCAAAGATTATCGCTTGAAACGTATACCTTGTAACGTAACCACTATAGTTTAGGATTTGTTACATTGATGTAGAAATAAAACCTGCGCCATTAGTTGACCTTGTAGGTATTTTTTTTCAGATTTATTTCAAACATCTTGTGGAAATGATCGTTTCATATCACCTTGACCTACTTGATTGATTATTTGTAGTTCTACAAAAAGATTATGAAGAATCAATGTCATGTCTTAGCCATTTTTAGTTCTGTACCTCTTCTGTCACTGTGAATATGTTCTGAACTCCTCTTCCTGGCTGTGTACTTGAAATCTTTCTCTACTACTTCAACTGAGAGCATATTATTTCTTCACTGATGGCTTTGGCCAGGAGATGAACACTTGATGTATTGTGATGTCTCACGTTGGTTGGG ATGAAGATTCAGTGCAATGTCTGCGAGATGGCTGAGGCGACCGTTCTGTGTTGTGCTGATGAGGCGGCGCTGTGCTGGGCTTGCGATGAGAAGATTCATGCGGCCAACAAGCTTGCAAGCAAGCACCAGAGAGTTCCTCTCTCTGATTCTTCATCTCAGATGCCCAAATGCGACATCTGCCAGGAAGCTAGTGGCTATATCTTTTGTTTAGAGGATCGTGCATTACTTTGCAGAAAGTGTGATGTTGCTATACACACAGCAAATACTTATGTAACTGGTCATCAGCGCTTTCTGCTTACTGGGGTGAAAGTGGCGCTTGAGCCAACTGATCCTGTTCCTTGTTCTTCCATGCCCAAGTCACATTCTCAAGTGAAACCTACTGAGACAAAAGTTAGACCTCTGTCTGAAAGGGAATTCTCGTTGCCTTCTCCTGGTGAACTCAGCAGATGCCTGTCTGTACAAGGTGGATCTGAGGACTTCATGGCAAATGGAACGTTCCATACCGGAGATACTGTTTCTGGTGGCTTTTCACAATGGCAAATGGATGACCTTATTAATCTGACTGGATTCAATCAGAACTATGGGTTTTTGGATAGCGGATCATCCAAGGCTGATAGCGGCAAGCTCGGGGATTCTGATTCATCTCCAGTTTTAAGGGCTGCTGACGTTGAGCTAGACGACAACGATGAATGCTCGGGTCAGGTTCCAGAGGCTTCCTGGACTGTGCCTCAGATTCCCTCCCCTCCCACAGCATCTGGCTTATACTGGCCAAGAAGTTACCATAATTCTATGGATGGTGCTGTTTCTGTTCCTGACATTTCCGGTTCTTCCGAAAAGGTTCAACATTGCTCACATAATGGTAGATTCTTGAAACGACGGAGGCAGTTCTAG MKIQCNVCEMAEATVLCCADEAALCWACDEKIHAANKLASKHQRVPLSDSSSQMPKCDICQEASGYIFCLEDRALLCRKCDVAIHTANTYVTGHQRFLLTGVKVALEPTDPVPCSSMPKSHSQVKPTETKVRPLSEREFSLPSPGELSRCLSVQGGSEDFMANGTFHTGDTVSGGFSQWQMDDLINLTGFNQNYGFLDSGSSKADSGKLGDSDSSPVLRAADVELDDNDECSGQVPEASWTVPQIPSPPTASGLYWPRSYHNSMDGAVSVPDISGSSEKVQHCSHNGRFLKRRRQF
BLAST of Carg11357 vs. NCBI nr
Match: XP_023553515.1 (B-box zinc finger protein 22-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 602.8 bits (1553), Expect = 6.2e-169 Identity = 293/296 (98.99%), Postives = 294/296 (99.32%), Query Frame = 0
BLAST of Carg11357 vs. NCBI nr
Match: XP_023553512.1 (B-box zinc finger protein 22-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553513.1 B-box zinc finger protein 22-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553514.1 B-box zinc finger protein 22-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 598.2 bits (1541), Expect = 1.5e-167 Identity = 293/297 (98.65%), Postives = 294/297 (98.99%), Query Frame = 0
BLAST of Carg11357 vs. NCBI nr
Match: XP_022931547.1 (B-box zinc finger protein 22-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 597.8 bits (1540), Expect = 2.0e-167 Identity = 291/296 (98.31%), Postives = 293/296 (98.99%), Query Frame = 0
BLAST of Carg11357 vs. NCBI nr
Match: XP_022984478.1 (B-box zinc finger protein 22-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 596.3 bits (1536), Expect = 5.8e-167 Identity = 291/296 (98.31%), Postives = 293/296 (98.99%), Query Frame = 0
BLAST of Carg11357 vs. NCBI nr
Match: XP_022931546.1 (B-box zinc finger protein 22-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 593.2 bits (1528), Expect = 4.9e-166 Identity = 291/297 (97.98%), Postives = 293/297 (98.65%), Query Frame = 0
BLAST of Carg11357 vs. TAIR10
Match: AT1G78600.2 (light-regulated zinc finger protein 1) HSP 1 Score: 259.2 bits (661), Expect = 3.0e-69 Identity = 154/325 (47.38%), Postives = 190/325 (58.46%), Query Frame = 0
BLAST of Carg11357 vs. TAIR10
Match: AT1G06040.1 (B-box zinc finger family protein) HSP 1 Score: 158.3 bits (399), Expect = 7.3e-39 Identity = 74/109 (67.89%), Postives = 88/109 (80.73%), Query Frame = 0
BLAST of Carg11357 vs. TAIR10
Match: AT2G31380.1 (salt tolerance homologue) HSP 1 Score: 150.2 bits (378), Expect = 2.0e-36 Identity = 77/145 (53.10%), Postives = 100/145 (68.97%), Query Frame = 0
BLAST of Carg11357 vs. TAIR10
Match: AT4G10240.1 (B-box zinc finger family protein) HSP 1 Score: 133.3 bits (334), Expect = 2.5e-31 Identity = 76/155 (49.03%), Postives = 96/155 (61.94%), Query Frame = 0
BLAST of Carg11357 vs. TAIR10
Match: AT4G39070.1 (B-box zinc finger family protein) HSP 1 Score: 129.0 bits (323), Expect = 4.7e-30 Identity = 70/136 (51.47%), Postives = 84/136 (61.76%), Query Frame = 0
BLAST of Carg11357 vs. Swiss-Prot
Match: sp|Q9SYM2|BBX22_ARATH (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2) HSP 1 Score: 257.7 bits (657), Expect = 1.6e-67 Identity = 151/305 (49.51%), Postives = 186/305 (60.98%), Query Frame = 0
BLAST of Carg11357 vs. Swiss-Prot
Match: sp|Q96288|BBX24_ARATH (B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.3e-37 Identity = 74/109 (67.89%), Postives = 88/109 (80.73%), Query Frame = 0
BLAST of Carg11357 vs. Swiss-Prot
Match: sp|Q9SID1|BBX25_ARATH (B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2) HSP 1 Score: 150.2 bits (378), Expect = 3.6e-35 Identity = 77/145 (53.10%), Postives = 100/145 (68.97%), Query Frame = 0
BLAST of Carg11357 vs. Swiss-Prot
Match: sp|O82617|BBX23_ARATH (B-box zinc finger protein 23 OS=Arabidopsis thaliana OX=3702 GN=BBX23 PE=1 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 4.5e-30 Identity = 76/155 (49.03%), Postives = 96/155 (61.94%), Query Frame = 0
BLAST of Carg11357 vs. Swiss-Prot
Match: sp|Q0IGM7|BBX20_ARATH (B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 8.5e-29 Identity = 70/136 (51.47%), Postives = 84/136 (61.76%), Query Frame = 0
BLAST of Carg11357 vs. TrEMBL
Match: tr|A0A1S3BS88|A0A1S3BS88_CUCME (B-box zinc finger protein 22 OS=Cucumis melo OX=3656 GN=LOC103492938 PE=4 SV=1) HSP 1 Score: 529.6 bits (1363), Expect = 4.4e-147 Identity = 266/298 (89.26%), Postives = 276/298 (92.62%), Query Frame = 0
BLAST of Carg11357 vs. TrEMBL
Match: tr|A0A0A0KVG2|A0A0A0KVG2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G083550 PE=4 SV=1) HSP 1 Score: 524.2 bits (1349), Expect = 1.8e-145 Identity = 262/298 (87.92%), Postives = 274/298 (91.95%), Query Frame = 0
BLAST of Carg11357 vs. TrEMBL
Match: tr|A0A2I4GY04|A0A2I4GY04_9ROSI (B-box zinc finger protein 22 OS=Juglans regia OX=51240 GN=LOC109011878 PE=4 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 4.3e-102 Identity = 194/295 (65.76%), Postives = 229/295 (77.63%), Query Frame = 0
BLAST of Carg11357 vs. TrEMBL
Match: tr|A0A068UCQ5|A0A068UCQ5_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00021404001 PE=4 SV=1) HSP 1 Score: 372.5 bits (955), Expect = 9.0e-100 Identity = 196/299 (65.55%), Postives = 223/299 (74.58%), Query Frame = 0
BLAST of Carg11357 vs. TrEMBL
Match: tr|A0A2P4IDF1|A0A2P4IDF1_QUESU (B-box zinc finger protein 22 OS=Quercus suber OX=58331 GN=CFP56_18806 PE=4 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 2.2e-98 Identity = 191/288 (66.32%), Postives = 220/288 (76.39%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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