CmoCh16G003310 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh16G003310
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Unknown protein
Location	Cmo_Chr16 : 1514522 .. 1516345 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAGTGGCAAACAAACATAGCCTTCTCTGTTTGTCGGTAATCTCAAACTCTGTCTTCGGATTATATATACAAATCCTTCAGATCCCAATCTTCTTCTCTGTACTTCGCAGACCTTCGCTGTCGTCTCCATTAACTCCTCCATCTATCTTCAGTTTTTCCTTCATTTTTTTGTTTTTGTTTTTGTGAATTCCGGCCGGATTCGTCGACGTTGTTCGGCGGTCGGGATTGATTGTGTTGAGAGGGAGATATCTTGTGATTTGAAGAGGAATTAGAAGAGATGAGTTATTATAATCAAGGCCAGGCTCCGGTTGGAGTGCCTCCGCCTCATGGTATTTTGCTGTTTTTTGTTATGATTTTGGTGTTTTTAGTGTTGGATCGGTGGGATTGTGGTGTGCGATTGTAGATCTGTGCATGTTTTGTGTTGATTAAGAGTATTGATGGTTGTTTTAGGTTATCCGCCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCACCGCAGGGATATCCGCCCCCAGGATATCCGCCGCAGGGCTATCCTCCTCCCGGTGCTTATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGGTCAACCTCCTCCTCCTCAACAGCAAAGTAGCAGCTCTGGTTGCTTGCAAGGCTGGTAAGTCGCTCTCTCTTGATTTCTCCATTTTTACCTGTTCAAGGCGGTTGAAATCGGATCTGAATCATTCCGATGATATGGTATCGGAAACTGAATTCAGAACGAGCCAATTGCATCGTCTGGTAATGCGTTCAGCCTCGGTTTCATCGCCCTAATGAAATTCCCAACTTGCCCCCCAGTTAGCCTCTATATTACAGTCTTTTTTAATGTCTATTTTATTTTAATCTGGGAAGCTTAAGAAATTATAATGTTTATCATTTTAATTGTTGCAAACGGCACAAACCATACTGTATAAGATCATTGCAATTAATCCAATTTTTTAGCATATACAATGATATTAGCCATTTTCTAATGGTTTCCAGATCAATGTTGAGCTGTCTGTCCTCTCAATTTAGGAAAACAAATAGATTATCCTAAAGAATTTAGTATTAATTGTAAAATTCTTTGATTTTCGGGTGGATCTTAATTGATGGATCAAATTGTGAATGATCAACATTGTGGGATAATTTGTTCTTCTATGTATTGAACATCATCATTAGTCTAAATCTAATCTTTTGTCATTTATTTTAAAACACTCATAATTCTTCCAAAATTTGTTAGATTAAGACCTCGAACGCGAGTAGCTATCCATGATGGTATTTAAGTCCCAATTTTCGTTACAATTAGCTATCACACTATTCCAAAACTCAATTTTGTTAGATGCAAGTCATCGATTAGGACTACTATTATCTTCATTAATATGAGATTTCATGTTTAAAGTAGATAATATCATGTGATTACGTAGATATGCGAATGGTCGATTGTTGTTACGTTAAATTTGTACCAAATTGGTATCAATTTGGGATGAGTTTGATACTAGAATCGAGTATGATATGAACTATGTGTGCAGTTTGGCTGCGCTGTGCTGTTGCTGCCTGCTCGACGCCTGCTTCTGAAGAGACCCCATGTGCAGTGTGTGGTGGGCTGGCTTCAAATTCAAGGACTATCTCTCTCTCTCTCTCAGTAAAGCTTTTCCCTAAGAGAAAAAAGATTGAAACTGGGCGTTCAATTTGTGAAGTTTTTAATTTGTTGCGTTTATTGATTATAATAGTCTAGTGCTTGTTCCTCCCTCGTTCCCTCCATTTTTCTTATATAAATAACACCCCCTTATCTCTCTCTAGTGCTT

mRNA sequence

GTTAGTGGCAAACAAACATAGCCTTCTCTGTTTGTCGGTAATCTCAAACTCTGTCTTCGGATTATATATACAAATCCTTCAGATCCCAATCTTCTTCTCTGTACTTCGCAGACCTTCGCTGTCGTCTCCATTAACTCCTCCATCTATCTTCAGTTTTTCCTTCATTTTTTTGTTTTTGTTTTTGTGAATTCCGGCCGGATTCGTCGACGTTGTTCGGCGGTCGGGATTGATTGTGTTGAGAGGGAGATATCTTGTGATTTGAAGAGGAATTAGAAGAGATGAGTTATTATAATCAAGGCCAGGCTCCGGTTGGAGTGCCTCCGCCTCATGGTTATCCGCCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCACCGCAGGGATATCCGCCCCCAGGATATCCGCCGCAGGGCTATCCTCCTCCCGGTGCTTATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGGTCAACCTCCTCCTCCTCAACAGCAAAGTAGCAGCTCTGGTTGCTTGCAAGGCTGTTTGGCTGCGCTGTGCTGTTGCTGCCTGCTCGACGCCTGCTTCTGAAGAGACCCCATGTGCAGTGTGTGGTGGGCTGGCTTCAAATTCAAGGACTATCTCTCTCTCTCTCTCAGTAAAGCTTTTCCCTAAGAGAAAAAAGATTGAAACTGGGCGTTCAATTTGTGAAGTTTTTAATTTGTTGCGTTTATTGATTATAATAGTCTAGTGCTTGTTCCTCCCTCGTTCCCTCCATTTTTCTTATATAAATAACACCCCCTTATCTCTCTCTAGTGCTT

Coding sequence (CDS)

ATGAGTTATTATAATCAAGGCCAGGCTCCGGTTGGAGTGCCTCCGCCTCATGGTTATCCGCCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCACCGCAGGGATATCCGCCCCCAGGATATCCGCCGCAGGGCTATCCTCCTCCCGGTGCTTATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGGTCAACCTCCTCCTCCTCAACAGCAAAGTAGCAGCTCTGGTTGCTTGCAAGGCTGTTTGGCTGCGCTGTGCTGTTGCTGCCTGCTCGACGCCTGCTTCTGA

Homology

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BLAST of CmoCh16G003310 vs. Swiss-Prot
Match: CYT1A_ARATH (Cysteine-rich and transmembrane domain-containing protein A OS=Arabidopsis thaliana GN=At2g41420 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 7.3e-33
Identity = 81/101 (80.20%), Postives = 82/101 (81.19%), Query Frame = 1


Query: 1   MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
           MS YNQ   PVGVPPP GYPPEGYPKDAYPP GYPPQGYP  GYPPQGYP  G YP QGY
Sbjct: 1   MSQYNQ--PPVGVPPPQGYPPEGYPKDAYPPQGYPPQGYPQQGYPPQGYPQQG-YPQQGY 60

Query: 61  PPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF 102
           PPPYAPQY  PP  QQQ SS G L+GCLAALCCCCLLDACF
Sbjct: 61  PPPYAPQYPPPPQHQQQQSSPGFLEGCLAALCCCCLLDACF 98

[Close]

BLAST of CmoCh16G003310 vs. Swiss-Prot
Match: CYT1B_ARATH (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana GN=At3g57160 PE=3 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 1.4e-20
Identity = 68/101 (67.33%), Postives = 72/101 (71.29%), Query Frame = 1


Query: 5   NQGQAPVGVPPPHGYPPEGYPKDAYPPPG--YPPQGYPPP-GYPPQGYPPPGAYPPQGYP 64
           +Q    VGVPP H YP EG PKDAYPPPG  YP QGYPPP GYP QGYPP G YPPQGYP
Sbjct: 2   SQQPPAVGVPPSHAYPAEGPPKDAYPPPGQPYPQQGYPPPQGYPQQGYPPQG-YPPQGYP 61

Query: 65  PPYAPQYGQPPPPQQQSSSS-GCLQGCLAALCCCCLLDACF 102
               PQ G PP  QQQ   S G L+GC+AALCC C+LDACF
Sbjct: 62  EQGYPQQGYPPQQQQQQKHSPGMLEGCIAALCCYCVLDACF 101

[Close]

BLAST of CmoCh16G003310 vs. Swiss-Prot
Match: CYTM1_DANRE (Cysteine-rich and transmembrane domain-containing protein 1 OS=Danio rerio GN=cystm1 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.0e-10
Identity = 56/114 (49.12%), Postives = 57/114 (50.00%), Query Frame = 1


Query: 4   YNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYP--PQGYP 63
           Y Q  A  G  P  GYP +GYP   YP  GYP QGYPP GYP QGYP  G YP  P G P
Sbjct: 3   YEQPPAYTGPGPAPGYPAQGYPAQGYPTQGYPAQGYPPQGYPAQGYPAQG-YPNYPPGPP 62

Query: 64  PPYAPQ-----YGQPPPP------------QQQSSSSGCLQGCLAALCCCCLLD 99
            PY  Q     Y QP PP              QS    CL  C AALCCCCL D
Sbjct: 63  GPYTAQPGYQGYPQPGPPTNTVYVVEQGRRDDQSGEQACLATCWAALCCCCLCD 115

[Close]

BLAST of CmoCh16G003310 vs. Swiss-Prot
Match: OPSD_ENTDO (Rhodopsin OS=Enteroctopus dofleini GN=RHO PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 5.6e-09
Identity = 41/55 (74.55%), Postives = 43/55 (78.18%), Query Frame = 1


Query: 14  PPPHGYPPEGYP-KDAYPPP-GYPPQGYPPPGYPPQGYPPPGAYP----PQGYPP 63
           PPP GYPP+GYP + AYPPP GYPPQGYPP GYPPQGYPP GA P    PQG PP
Sbjct: 391 PPPQGYPPQGYPPQGAYPPPQGYPPQGYPPQGYPPQGYPPQGAPPQVEAPQGAPP 445

[Close]

BLAST of CmoCh16G003310 vs. Swiss-Prot
Match: OPSD_SEPOF (Rhodopsin OS=Sepia officinalis GN=RHO PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.8e-08
Identity = 46/77 (59.74%), Postives = 47/77 (61.04%), Query Frame = 1


Query: 8   QAPVGVPPPHGYPPEG-YPKDAYPPP----GYPPQGYPPPGYPPQGYPPPGAYPPQGYPP 67
           Q     PP   YPP+G YP   YPPP    GYPPQGYPP   PPQGYPP   YPPQGYPP
Sbjct: 382 QQQAAYPPQGAYPPQGGYPPQGYPPPPAQGGYPPQGYPP---PPQGYPPAQGYPPQGYPP 441

Query: 68  PY-APQYGQPP---PPQ 76
           P  AP  G PP   PPQ
Sbjct: 442 PQGAPPQGAPPQAAPPQ 455

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BLAST of CmoCh16G003310 vs. TrEMBL
Match: A0A0A0KWC5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000680 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 2.2e-36
Identity = 82/101 (81.19%), Postives = 84/101 (83.17%), Query Frame = 1


Query: 1   MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
           MSYYNQGQ P+GVPPP GYPPEGYPKDAYPPPG          YPPQGYPPPGAYPPQGY
Sbjct: 1   MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPG----------YPPQGYPPPGAYPPQGY 60

Query: 61  PPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF 102
           PPPYAPQY QPPP QQ SS  GCL+GCLAALCCCCLLDACF
Sbjct: 61  PPPYAPQYAQPPPQQQHSSGPGCLEGCLAALCCCCLLDACF 91

[Close]

BLAST of CmoCh16G003310 vs. TrEMBL
Match: I1JAY1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G242200 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 9.3e-35
Identity = 82/106 (77.36%), Postives = 85/106 (80.19%), Query Frame = 1


Query: 1   MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPP--- 60
           MSYYNQ Q PVGVPPP GYPPEGY K+ YPPPGYPP GYPP GYPP GYPP   YPP   
Sbjct: 1   MSYYNQQQPPVGVPPPQGYPPEGYGKEGYPPPGYPPAGYPPAGYPPPGYPPQQGYPPPPY 60

Query: 61  --QGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF 102
             QGYPPPYAPQY QPPP QQ S+  GCL+GCLAALCCCCLLDACF
Sbjct: 61  PAQGYPPPYAPQYAQPPPRQQNSTGPGCLEGCLAALCCCCLLDACF 106

[Close]

BLAST of CmoCh16G003310 vs. TrEMBL
Match: V7CGF5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G051400g PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 6.0e-34
Identity = 86/104 (82.69%), Postives = 89/104 (85.58%), Query Frame = 1


Query: 1   MSYYNQGQAP-VGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPP-QGYPPPGAYPPQ 60
           MSYYNQ Q P VGVPPP GYPPEGY K+ YPPPGYPP GYPPPGYPP QGYPPP  YP Q
Sbjct: 1   MSYYNQHQQPPVGVPPPQGYPPEGYGKEGYPPPGYPPPGYPPPGYPPQQGYPPP-PYPAQ 60

Query: 61  GYPPPYAPQYGQPPPPQQQSS-SSGCLQGCLAALCCCCLLDACF 102
           GYPPPYAPQY  PPP QQQ+S SSGCL+GCLAALCCCCLLDACF
Sbjct: 61  GYPPPYAPQYAPPPPQQQQNSQSSGCLEGCLAALCCCCLLDACF 103

[Close]

BLAST of CmoCh16G003310 vs. TrEMBL
Match: A0A022RH20_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a021603mg PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.3e-33
Identity = 83/103 (80.58%), Postives = 85/103 (82.52%), Query Frame = 1


Query: 1   MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
           MSYYNQ Q PVGVPPP GYPPEGYPKDAYPP GYPPQGYPP GYPPQGYP     P QGY
Sbjct: 1   MSYYNQNQPPVGVPPPQGYPPEGYPKDAYPPAGYPPQGYPPQGYPPQGYP-----PQQGY 60

Query: 61  PPPYAPQYGQPPPP--QQQSSSSGCLQGCLAALCCCCLLDACF 102
           P    PQYGQPPPP  QQQS SSGC++GCLAALCCCCLLDACF
Sbjct: 61  P----PQYGQPPPPQQQQQSGSSGCMEGCLAALCCCCLLDACF 94

[Close]

BLAST of CmoCh16G003310 vs. TrEMBL
Match: U5G3V1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s09010g PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.3e-33
Identity = 84/101 (83.17%), Postives = 86/101 (85.15%), Query Frame = 1


Query: 1   MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
           MSYYNQ Q PVGVPPP GYPPEGYPKDAYPPPGYPPQGY P GYPPQGYPP G YPP   
Sbjct: 1   MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPPGYPPQGY-PQGYPPQGYPPQG-YPP--- 60

Query: 61  PPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF 102
           PPPYAPQYGQPP  QQ SS  GC++GCLAALCCCCLLDACF
Sbjct: 61  PPPYAPQYGQPPRQQQGSSGPGCMEGCLAALCCCCLLDACF 96

[Close]

BLAST of CmoCh16G003310 vs. TAIR10
Match: AT2G41420.1 (AT2G41420.1 proline-rich family protein)

HSP 1 Score: 141.0 bits (354), Expect = 4.1e-34
Identity = 81/101 (80.20%), Postives = 82/101 (81.19%), Query Frame = 1


Query: 1   MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
           MS YNQ   PVGVPPP GYPPEGYPKDAYPP GYPPQGYP  GYPPQGYP  G YP QGY
Sbjct: 1   MSQYNQ--PPVGVPPPQGYPPEGYPKDAYPPQGYPPQGYPQQGYPPQGYPQQG-YPQQGY 60

Query: 61  PPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF 102
           PPPYAPQY  PP  QQQ SS G L+GCLAALCCCCLLDACF
Sbjct: 61  PPPYAPQYPPPPQHQQQQSSPGFLEGCLAALCCCCLLDACF 98

[Close]

BLAST of CmoCh16G003310 vs. TAIR10
Match: AT5G67600.1 (AT5G67600.1 unknown protein)

HSP 1 Score: 96.3 bits (238), Expect = 1.2e-20
Identity = 63/98 (64.29%), Postives = 67/98 (68.37%), Query Frame = 1


Query: 4   YNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPP 63
           Y+Q Q PVG PPP GYP    PKD YPP GYPP GYPPPGY  QG      YP QGYPP 
Sbjct: 2   YHQEQHPVGAPPPQGYP----PKDGYPPAGYPPAGYPPPGY-AQG------YPAQGYPP- 61

Query: 64  YAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF 102
             PQY Q P   QQ  ++G L+GCLAALCCCCLLDACF
Sbjct: 62  --PQYSQAP---QQKQNAGMLEGCLAALCCCCLLDACF 82

[Close]

BLAST of CmoCh16G003310 vs. TAIR10
Match: AT3G49845.1 (AT3G49845.1 unknown protein)

HSP 1 Score: 84.3 bits (207), Expect = 4.6e-17
Identity = 64/124 (51.61%), Postives = 70/124 (56.45%), Query Frame = 1


Query: 4   YNQGQAPVGVPPPHGYPP-EGYPKDAYPPP-----------GYPPQGYPPP------GYP 63
           Y   Q PV  PPP GYPP EGYP   YPPP           GYPP GYPPP      GYP
Sbjct: 3   YQDPQHPVSAPPPQGYPPKEGYPPAGYPPPAGYPPPQYPQAGYPPAGYPPPQQGYGQGYP 62

Query: 64  PQGYPPPGAYPPQGYPPPYA------PQYGQPPPPQQQSS--SSGCLQGCLAALCCCCLL 102
            QGYPPP    PQG+PP Y       P YGQ PP  ++    S G ++GCLA LCCC LL
Sbjct: 63  AQGYPPPQY--PQGHPPQYPYQGPPPPHYGQAPPKNKKDKKDSGGFMEGCLAMLCCCVLL 122

[Close]

BLAST of CmoCh16G003310 vs. TAIR10
Match: AT1G31750.1 (AT1G31750.1 proline-rich family protein)

HSP 1 Score: 57.8 bits (138), Expect = 4.6e-09
Identity = 41/60 (68.33%), Postives = 43/60 (71.67%), Query Frame = 1


Query: 17 HGYPPEGYP---KDAYPPP-GYPPQGYPPP--GYPPQGY-PPPGAYPPQGYPPPYAPQYG 70
          HGYPP  YP   + AYPPP GYPPQGYPPP  GYPP  Y PPPGAYPP GYP P  P+ G
Sbjct: 22 HGYPPGAYPPPPQGAYPPPGGYPPQGYPPPPHGYPPAAYPPPPGAYPPAGYPGPSGPRPG 81

[Close]

BLAST of CmoCh16G003310 vs. TAIR10
Match: AT5G45350.1 (AT5G45350.1 proline-rich family protein)

HSP 1 Score: 55.5 bits (132), Expect = 2.3e-08
Identity = 43/62 (69.35%), Postives = 43/62 (69.35%), Query Frame = 1


Query: 17 HGYPPEGYPKD-AYPPPGYPPQGYPPP--GYPPQGYPPPGAYPPQ--GYPPPYAPQYGQP 74
          HGYPP GYP   AYPP GYP QGYPPP   YPP GY PPGAYPP   GYPP  AP YG  
Sbjct: 14 HGYPPAGYPPPGAYPPAGYPQQGYPPPPGAYPPAGY-PPGAYPPAPGGYPP--APGYGGY 72

[Close]

BLAST of CmoCh16G003310 vs. NCBI nr
Match: gi|778689152|ref|XP_011652909.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis sativus])

HSP 1 Score: 159.5 bits (402), Expect = 3.2e-36
Identity = 82/101 (81.19%), Postives = 84/101 (83.17%), Query Frame = 1


Query: 1   MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
           MSYYNQGQ P+GVPPP GYPPEGYPKDAYPPPG          YPPQGYPPPGAYPPQGY
Sbjct: 1   MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPG----------YPPQGYPPPGAYPPQGY 60

Query: 61  PPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF 102
           PPPYAPQY QPPP QQ SS  GCL+GCLAALCCCCLLDACF
Sbjct: 61  PPPYAPQYAQPPPQQQHSSGPGCLEGCLAALCCCCLLDACF 91

[Close]

BLAST of CmoCh16G003310 vs. NCBI nr
Match: gi|659108830|ref|XP_008454408.1| (PREDICTED: CYSTM1 family protein A-like [Cucumis melo])

HSP 1 Score: 158.7 bits (400), Expect = 5.4e-36
Identity = 83/101 (82.18%), Postives = 85/101 (84.16%), Query Frame = 1


Query: 1   MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
           MSYYNQGQ P+GVPPP GYPPEGYPKDAYPPPGYPPQGYPPPG          AYPPQGY
Sbjct: 1   MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPG----------AYPPQGY 60

Query: 61  PPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF 102
           PPPYAPQY QPPP QQQSS  GCL+GCLAALCCCCLLDACF
Sbjct: 61  PPPYAPQYAQPPP-QQQSSGPGCLEGCLAALCCCCLLDACF 90

[Close]

BLAST of CmoCh16G003310 vs. NCBI nr
Match: gi|694401186|ref|XP_009375656.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Pyrus x bretschneideri])

HSP 1 Score: 156.4 bits (394), Expect = 2.7e-35
Identity = 83/101 (82.18%), Postives = 85/101 (84.16%), Query Frame = 1


Query: 1   MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
           MSYYNQ Q PVGVPPP GYPPEGYPKDAYPPPGYPPQGYPPP    QGYP       QGY
Sbjct: 1   MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPP----QGYP-------QGY 60

Query: 61  PPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF 102
           PPPYAPQY QPPP QQQSSSSGC++GCLAALCCCCLLDACF
Sbjct: 61  PPPYAPQYAQPPPQQQQSSSSGCMEGCLAALCCCCLLDACF 90

[Close]

BLAST of CmoCh16G003310 vs. NCBI nr
Match: gi|571436869|ref|XP_006573901.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Glycine max])

HSP 1 Score: 154.1 bits (388), Expect = 1.3e-34
Identity = 82/106 (77.36%), Postives = 85/106 (80.19%), Query Frame = 1


Query: 1   MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPP--- 60
           MSYYNQ Q PVGVPPP GYPPEGY K+ YPPPGYPP GYPP GYPP GYPP   YPP   
Sbjct: 1   MSYYNQQQPPVGVPPPQGYPPEGYGKEGYPPPGYPPAGYPPAGYPPPGYPPQQGYPPPPY 60

Query: 61  --QGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF 102
             QGYPPPYAPQY QPPP QQ S+  GCL+GCLAALCCCCLLDACF
Sbjct: 61  PAQGYPPPYAPQYAQPPPRQQNSTGPGCLEGCLAALCCCCLLDACF 106

[Close]

BLAST of CmoCh16G003310 vs. NCBI nr
Match: gi|657954637|ref|XP_008368761.1| (PREDICTED: CYSTM1 family protein A [Malus domestica])

HSP 1 Score: 152.9 bits (385), Expect = 3.0e-34
Identity = 82/101 (81.19%), Postives = 84/101 (83.17%), Query Frame = 1


Query: 1   MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
           MSYYNQ Q PVGVPPP GYPPEGYPKDAYPPP YPPQGYPPP    QGYP       QGY
Sbjct: 1   MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPPVYPPQGYPPP----QGYP-------QGY 60

Query: 61  PPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF 102
           PPPYAPQY QPPP QQQSSSSGC++GCLAALCCCCLLDACF
Sbjct: 61  PPPYAPQYAQPPPQQQQSSSSGCMEGCLAALCCCCLLDACF 90

The following BLAST results are available for this feature:

BLAST of CmoCh16G003310 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CYT1A_ARATH	7.3e-33	80.20	Cysteine-rich and transmembrane domain-containing protein A OS=Arabidopsis thali...	[more]
CYT1B_ARATH	1.4e-20	67.33	Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thali...	[more]
CYTM1_DANRE	3.0e-10	49.12	Cysteine-rich and transmembrane domain-containing protein 1 OS=Danio rerio GN=cy...	[more]
OPSD_ENTDO	5.6e-09	74.55	Rhodopsin OS=Enteroctopus dofleini GN=RHO PE=1 SV=1	[more]
OPSD_SEPOF	4.8e-08	59.74	Rhodopsin OS=Sepia officinalis GN=RHO PE=2 SV=1	[more]

BLAST of CmoCh16G003310 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWC5_CUCSA	2.2e-36	81.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000680 PE=4 SV=1	[more]
I1JAY1_SOYBN	9.3e-35	77.36	Uncharacterized protein OS=Glycine max GN=GLYMA_01G242200 PE=4 SV=1	[more]
V7CGF5_PHAVU	6.0e-34	82.69	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G051400g PE=4 SV=1	[more]
A0A022RH20_ERYGU	1.3e-33	80.58	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a021603mg PE=4 SV=1	[more]
U5G3V1_POPTR	1.3e-33	83.17	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s09010g PE=4 SV=1	[more]

BLAST of CmoCh16G003310 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41420.1	4.1e-34	80.20	proline-rich family protein	[more]
AT5G67600.1	1.2e-20	64.29	unknown protein	[more]
AT3G49845.1	4.6e-17	51.61	unknown protein	[more]
AT1G31750.1	4.6e-09	68.33	proline-rich family protein	[more]
AT5G45350.1	2.3e-08	69.35	proline-rich family protein	[more]

BLAST of CmoCh16G003310 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778689152\|ref\|XP_011652909.1\|	3.2e-36	81.19	PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cuc...	[more]
gi\|659108830\|ref\|XP_008454408.1\|	5.4e-36	82.18	PREDICTED: CYSTM1 family protein A-like [Cucumis melo]	[more]
gi\|694401186\|ref\|XP_009375656.1\|	2.7e-35	82.18	PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Pyrus x ...	[more]
gi\|571436869\|ref\|XP_006573901.1\|	1.3e-34	77.36	PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Glycine ...	[more]
gi\|657954637\|ref\|XP_008368761.1\|	3.0e-34	81.19	PREDICTED: CYSTM1 family protein A [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G003310.1	CmoCh16G003310.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31568	FAMILY NOT NAMED	coord: 1..101 score: 1.2
None	No IPR available	PANTHER	PTHR31568:SF3	CYSTM1 FAMILY PROTEIN A-RELATED	coord: 1..101 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh16G003310	Carg19694	Silver-seed gourd	carcmoB0402

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh16G003310	Cucumber (Chinese Long) v3	cmocucB0369
CmoCh16G003310	Cucumber (Chinese Long) v3	cmocucB0385
CmoCh16G003310	Cucumber (Chinese Long) v3	cmocucB0391
CmoCh16G003310	Cucumber (Chinese Long) v3	cmocucB0409
CmoCh16G003310	Watermelon (97103) v2	cmowmbB316
CmoCh16G003310	Watermelon (97103) v2	cmowmbB333
CmoCh16G003310	Wax gourd	cmowgoB0405
CmoCh16G003310	Cucurbita moschata (Rifu)	cmocmoB010
CmoCh16G003310	Cucurbita moschata (Rifu)	cmocmoB096
CmoCh16G003310	Cucurbita moschata (Rifu)	cmocmoB286
CmoCh16G003310	Cucumber (Gy14) v1	cgycmoB0625
CmoCh16G003310	Cucumber (Gy14) v1	cgycmoB0818
CmoCh16G003310	Cucumber (Gy14) v1	cgycmoB0964
CmoCh16G003310	Cucurbita maxima (Rimu)	cmacmoB133
CmoCh16G003310	Cucurbita maxima (Rimu)	cmacmoB322
CmoCh16G003310	Cucurbita maxima (Rimu)	cmacmoB502
CmoCh16G003310	Cucurbita maxima (Rimu)	cmacmoB701
CmoCh16G003310	Wild cucumber (PI 183967)	cmocpiB329
CmoCh16G003310	Wild cucumber (PI 183967)	cmocpiB336
CmoCh16G003310	Wild cucumber (PI 183967)	cmocpiB344
CmoCh16G003310	Cucumber (Chinese Long) v2	cmocuB322
CmoCh16G003310	Cucumber (Chinese Long) v2	cmocuB328
CmoCh16G003310	Cucumber (Chinese Long) v2	cmocuB338
CmoCh16G003310	Melon (DHL92) v3.5.1	cmomeB280
CmoCh16G003310	Melon (DHL92) v3.5.1	cmomeB298
CmoCh16G003310	Watermelon (Charleston Gray)	cmowcgB273
CmoCh16G003310	Watermelon (97103) v1	cmowmB287
CmoCh16G003310	Cucurbita pepo (Zucchini)	cmocpeB307
CmoCh16G003310	Cucurbita pepo (Zucchini)	cmocpeB311
CmoCh16G003310	Cucurbita pepo (Zucchini)	cmocpeB321
CmoCh16G003310	Bottle gourd (USVL1VR-Ls)	cmolsiB294
CmoCh16G003310	Bottle gourd (USVL1VR-Ls)	cmolsiB298
CmoCh16G003310	Cucumber (Gy14) v2	cgybcmoB465
CmoCh16G003310	Cucumber (Gy14) v2	cgybcmoB471
CmoCh16G003310	Melon (DHL92) v3.6.1	cmomedB317
CmoCh16G003310	Melon (DHL92) v3.6.1	cmomedB341
CmoCh16G003310	Melon (DHL92) v3.6.1	cmomedB342
CmoCh16G003310	Silver-seed gourd	carcmoB0258
CmoCh16G003310	Silver-seed gourd	carcmoB0509