Carg19694 (gene) Silver-seed gourd

NameCarg19694
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_133 : 200650 .. 202464 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAACAAACATAACCTTCTCTGTTTGTCGGTAATCTCAAACTCTGTCTTCGGATTATATATACAAATCCTTCAGATCCCAATCTTCTTCTCTGTACTTCGCAGACCTTCGCTGTCGTCTCCATTAACTCCTCCATCTATCTTCAGTTTTTCCTTCATTTTTTTGTTTTTGTTTTTGTGAATTCCGGCCGGATTCGTCGACGTTGTTCGGCGGTCGGGATTGATTGTGTTGAGAGGGAGATATCTTGTGATTTGAAGAGGAAGTAGAAGAGATGAGTTATTATAATCAAGGCCAGGCTCCGGTTGGAGTGCCTCCGCCTCATGGTATTTTGCTGTTTTTTGTTATGATTTTGGTGTTTTTAGTGTTGGATCGGTGGGATTGTGGTGTGCGATTGTAGATCTGTGTATGTTTTGTGTTGATTAAGAGTATTGATGGTTGTTTTAGGTTATCCGCCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCACCGCAGGGATATCCACCCCCAGGATATCCGCCGCAGGGCTATCCTCCTCCCGGTGCTTATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGGTCAACCTCCTCCTCCTCAACAGCAAAGTAGCAGCTCTGGTTGCTTGCAAGGCTGGTAAGTCGCTCTCTCTTGATTTCTCCATTTTTACCTGTTCAAGGCGGTTGAAATCGGATCTGAATCATTCCGATGATATGGTATCGGAAACTGAATTCAGAACGAGCCAATTGCATCGTCTGGTAATGCGTTCAGCCTCGGTTTCATCGCCCTAATGAAATCCCCAAATTGCCCCCCAGTTAGCCTCTATATTACAGTCTTGTTTAATATCTATTTTATTTTAATCTGGGAAGCTTAAGAAATTATAATGTTTATCATTTTAATTGTTGCAAACGAACCATACTGTACAAGATCATTGAAACCAATTTTTTAGCATACAATGATATTAGCCATTTTCTAATGGTTTCCAGATCAATGTTGAGCTGTCTGTCCTCTCAATTTAGGAAAACAAATAGATTATCCTAAAGAATTTAGTATTAATGGTAAAATTCTTTGATTTTCGGGGTGGATCTTGATTGATGGATCAAATTGTGAAGGATCCAACATTGTGGGATAATTTGTTCATCTGTGTATTGACCATCATCATTAGTCTAAATCTAATATTTTGTCATTTATTTTAAAACACTCATAATTCTTCCAAAATTTGTTAGATAAAGACCTCCAAAGCGAGTAGCTATCCATGATGATGTTTAAGTCCCAATTTTCGTTACAGTTAGCTATCACACTATTCCAAAACTCAATTTTGTTAGATGCAAGTATCGATTAGGACTACTATTATCTTCATTAATATGAGATTTCATGTGTTAAAGTAGATAATATCATGTGATTACGTAGATATGCGAAGGATCGATTGTTGTTACGTTAAATTTGTACCAAATTGGTATCAATTTGGGATGAGTTTGATACTAAAATTGAGTATGATATGAACTGTGTGTGCAGTTTGGCTGCGCTGTGCTGTTGCTGCCTGCTCGACGCCTGCTTCTGAAGAGACCCCATGTGCAGTGTGTGGTGGGCGGGCTTCAAATTCAAGAACTATCTCTCTCTCTCTCTCAGTAAAGCTTTTCCCTAAGAGAAAAAAGATTGAAACTGGGCGTTCAATTTGTGAAGTTTTTAATTTGTTGCGTTTATTGATTATAATAGTCTAGTGCTTGTTCCTCCCTCGTTCCCTCCATTTTTCTTATATAAATAACACCCCCTTATCTCTCTCTAGTTTTTTTTTTTTTT

mRNA sequence

CAAACAAACATAACCTTCTCTGTTTGTCGGTAATCTCAAACTCTGTCTTCGGATTATATATACAAATCCTTCAGATCCCAATCTTCTTCTCTGTACTTCGCAGACCTTCGCTGTCGTCTCCATTAACTCCTCCATCTATCTTCAGTTTTTCCTTCATTTTTTTGTTTTTGTTTTTGTGAATTCCGGCCGGATTCGTCGACGTTGTTCGGCGGTCGGGATTGATTGTGTTGAGAGGGAGATATCTTGTGATTTGAAGAGGAAGTAGAAGAGATGAGTTATTATAATCAAGGCCAGGCTCCGGTTGGAGTGCCTCCGCCTCATGGTTATCCGCCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCACCGCAGGGATATCCACCCCCAGGATATCCGCCGCAGGGCTATCCTCCTCCCGGTGCTTATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGGTCAACCTCCTCCTCCTCAACAGCAAAGTAGCAGCTCTGGTTGCTTGCAAGGCTGGCGGTTGAAATCGGATCTGAATCATTCCGATGATATGGTATCGGAAACTGAATTCAGAACGAGCCAATTGCATCGTCTGTTTGGCTGCGCTGTGCTGTTGCTGCCTGCTCGACGCCTGCTTCTGAAGAGACCCCATGTGCAGTGTGTGGTGGGCGGGCTTCAAATTCAAGAACTATCTCTCTCTCTCTCTCAGTAAAGCTTTTCCCTAAGAGAAAAAAGATTGAAACTGGGCGTTCAATTTGTGAAGTTTTTAATTTGTTGCGTTTATTGATTATAATAGTCTAGTGCTTGTTCCTCCCTCGTTCCCTCCATTTTTCTTATATAAATAACACCCCCTTATCTCTCTCTAGTTTTTTTTTTTTTT

Coding sequence (CDS)

ATGAGTTATTATAATCAAGGCCAGGCTCCGGTTGGAGTGCCTCCGCCTCATGGTTATCCGCCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCACCGCAGGGATATCCACCCCCAGGATATCCGCCGCAGGGCTATCCTCCTCCCGGTGCTTATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGGTCAACCTCCTCCTCCTCAACAGCAAAGTAGCAGCTCTGGTTGCTTGCAAGGCTGGCGGTTGAAATCGGATCTGAATCATTCCGATGATATGGTATCGGAAACTGAATTCAGAACGAGCCAATTGCATCGTCTGTTTGGCTGCGCTGTGCTGTTGCTGCCTGCTCGACGCCTGCTTCTGAAGAGACCCCATGTGCAGTGTGTGGTGGGCGGGCTTCAAATTCAAGAACTATCTCTCTCTCTCTCTCAGTAA

Protein sequence

MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGWRLKSDLNHSDDMVSETEFRTSQLHRLFGCAVLLLPARRLLLKRPHVQCVVGGLQIQELSLSLSQ
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg19694-RACarg19694-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..73
NoneNo IPR availablePANTHERPTHR31568:SF3CYSTEINE-RICH AND TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN A-RELATEDcoord: 1..58
NoneNo IPR availablePANTHERPTHR31568:SF3CYSTEINE-RICH AND TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN A-RELATEDcoord: 54..88
NoneNo IPR availablePANTHERPTHR31568FAMILY NOT NAMEDcoord: 1..58
coord: 54..88

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg19694CmaCh16G003110Cucurbita maxima (Rimu)carcmaB0406
Carg19694CmoCh16G003310Cucurbita moschata (Rifu)carcmoB0402
The following gene(s) are paralogous to this gene:

None