CmaCh16G003110 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G003110
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Unknown protein
Location	Cma_Chr16 : 1451970 .. 1454453 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCCTTCCCGGATTAGCGGCAAACAAACATAACCTTCTCTGTTTGTCGGTAATCTCAAACTCTGTCTTCGGATTATATATACAAATCTTTCAGATCCCAATCTTCTTCTCTGTACTTCGCAGACCTTCGCTGGCGTCTCCATTGACTCCTCCATCTATCTTCAGTTTTTCCTTCTTTTTTTTTGTTTTTGTTTTTGTGAATTCCGGCCGGATTCGTCGACGTTGTTCGGCGGTCGGGATTGATTGTGTTGAGAGGGAGATATCTTGTTGATTTGAAGAGGAAGTAGAAGAGATGAGTTATTATAATCAAGGCCAGGCTCCGGTTGGAGTGCCTCCGCCTCAAGGTATTTTGCTGTTTTTTGTTATGATTTTGGTGTTTTTACTGTTGGATCGGAGGATTGTGGTGTGCGATTGTAGATCTGTGTATGTTTTGTGTTGATTAAGAGTATTGATGGTTGTTTTAGGTTATCCGCCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCGCCGCAGGGATATCCTCCCCCGGGATATCCGCCGCAGGGCTATCCTCCTCCCGGTGCTTATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGGTCAGCCTCCTCCTCCTCAACAGCAAAGTAGCAGCTCTGGTTGCTTGCAAGGCTGGTAAGTCGCTCTCTCTTGATTTCTCCATTTTTACCTGTTCAAGGCGGTTGAAATCGGATCTGAATCATTCCGATGATATGGTATCGGAAACTGAATTGAGAACGAGCCAATTGCATCGTCTGGTAATGCGTTCAGCCTCGGTTTCATCGCCCTAATGAAATCCCCAAATTGACCCCCCGTTAGCCTCTATATTGCAGTCTTTTTTAATATTTATTTTATTTTAATCTGGGAAGCTTAAGAAATTATAATGTTTATCATTTTAATTATTGCAAACGGCACAAACCATACTGTATAAGATCATTGCAATTAATCCAAAATTTTAAAATGCAATGGTATTAGTGTTAGAAATATATTATTTATGGAATATATCTTAGATATTATATCTTAATATACATTTTCAATTCTATTTTCTATCTCATTCTTAATATGGTATCAGAGCACCCATCTTAGTATTCCTAATATCAGAGTACCAATATTGATATTCTTAATATCAGAGCACTGATCATGGTATTCCTAATACCCTCTTGGACTCAAAGTCCAAGGGGAGTATTAAACCTAAAGCCAAATCCTAACTCAATCAGTGAAGCCTTTAAAGTTGCCAATCATCCAGTATCATGTAAGCATCTTCAAATTCTCACCAAGCTCAAAGGTGACATATTCAAGATGTTCGTATTTTCATTCACAACCTCTCAAGTGATCCAAAGCACTGATCTTGGTGTTATTATCCAGTAAAGCATTTATGCATGGACTAAGAAGTGATCAGGGAGGATATTCACTTGTTCCAAATCAAATTAAATGGGACAAGCAACTAATCCTCGAGTCAATCATTGCGGTCTATTTTTTACGGATATTTTCTTTACTGGGAAGACAAAAGTGTTATTGACCTACACTCTCTTCTCAAAGACAACTCGGGTGTTATTGACCTACACTCGTAAAGACAAGTTGAAAACAAGTATAATGTGATTGACATACACTCCTCCAACTTGAGGGGGAGTGTTGAGATATATTATTTATGGAATATATCTAAGGGTTTCCAGATCAATGTTGAGCTCTCTGCCCTCTCAATTTAGGAAAACTTATAAAACTTATAAATTATCCTAAAGAATTTAGTTTTAATTGTAAAATTGGTTGGTTTTCGAGGTGGATCTTAATTGATGAATCAAATTGTCGAACTAACATTCTGGAGTAATTTGTTCTTCTATGTATTGACCATCATCATTAGTTTAAATCTAATCTTTTGTCATTTATTTTAAAACATTCAAATTCTTTCAAATTTGTTTAGAATTTTGTTAGATTAAGACTTCACGTAGCTATCTACGATGGTGTTTTAAGTCCCAATTTTCGTTACAAGTAGCTATCACACTATTCCAAATTTCAATTTTGTTAGTTGCAAGTCATCGATATGGACTACTATTATCTTCAGTAATACGAGATTTCATGTTTAAAGTGAATAATATCATGTGTTTGCGAAGATATAATGTTATAAATTTGGGATGAGTTTGATACTAAAATTGAGTATGATATGAACTGTGTGTGCAGTTTGGCTGCGCTGTGCTGTTGCTGCCTGCTCGACGCCTGCTTCTGAAGAGACCCCATGTGCAGTGTGTGGAGGGCGGGCTTCAAATTCAAGAACTATCTCTCTCTCTCTCTCTCACAGTAAAGCTTTTCCCTAAGAGAAAAAAGATTGAAACTGGGCGTTCATTTTGTGAAGTTTTTAATTTGTTGCGTTTATTGATTATAATAGTCTAGTGCTTGTTCCTCCCTCGTTCCCTCCATTTTTCTTATATAAATAACACCCTTATCTCTCTCTAGT

mRNA sequence

AGCCTTCCCGGATTAGCGGCAAACAAACATAACCTTCTCTGTTTGTCGGTAATCTCAAACTCTGTCTTCGGATTATATATACAAATCTTTCAGATCCCAATCTTCTTCTCTGTACTTCGCAGACCTTCGCTGGCGTCTCCATTGACTCCTCCATCTATCTTCAGTTTTTCCTTCTTTTTTTTTGTTTTTGTTTTTGTGAATTCCGGCCGGATTCGTCGACGTTGTTCGGCGGTCGGGATTGATTGTGTTGAGAGGGAGATATCTTGTTGATTTGAAGAGGAAGTAGAAGAGATGAGTTATTATAATCAAGGCCAGGCTCCGGTTGGAGTGCCTCCGCCTCAAGGTTATCCGCCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCGCCGCAGGGATATCCTCCCCCGGGATATCCGCCGCAGGGCTATCCTCCTCCCGGTGCTTATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGGTCAGCCTCCTCCTCCTCAACAGCAAAGTAGCAGCTCTGGTTGCTTGCAAGGCTGTTTGGCTGCGCTGTGCTGTTGCTGCCTGCTCGACGCCTGCTTCTGAAGAGACCCCATGTGCAGTGTGTGGAGGGCGGGCTTCAAATTCAAGAACTATCTCTCTCTCTCTCTCTCACAGTAAAGCTTTTCCCTAAGAGAAAAAAGATTGAAACTGGGCGTTCATTTTGTGAAGTTTTTAATTTGTTGCGTTTATTGATTATAATAGTCTAGTGCTTGTTCCTCCCTCGTTCCCTCCATTTTTCTTATATAAATAACACCCTTATCTCTCTCTAGT

Coding sequence (CDS)

ATGAGTTATTATAATCAAGGCCAGGCTCCGGTTGGAGTGCCTCCGCCTCAAGGTTATCCGCCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCGCCGCAGGGATATCCTCCCCCGGGATATCCGCCGCAGGGCTATCCTCCTCCCGGTGCTTATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGGTCAGCCTCCTCCTCCTCAACAGCAAAGTAGCAGCTCTGGTTGCTTGCAAGGCTGTTTGGCTGCGCTGTGCTGTTGCTGCCTGCTCGACGCCTGCTTCTGA

Protein sequence

MSYYNQGQAPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF

Homology

[Close]

BLAST of CmaCh16G003110 vs. Swiss-Prot
Match: CYT1A_ARATH (Cysteine-rich and transmembrane domain-containing protein A OS=Arabidopsis thaliana GN=At2g41420 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.5e-33
Identity = 82/101 (81.19%), Postives = 83/101 (82.18%), Query Frame = 1


Query: 1   MSYYNQGQAPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
           MS YNQ   PVGVPPPQGYPPEGYPKDAYPP GYPPQGYP  GYPPQGYP  G YP QGY
Sbjct: 1   MSQYNQ--PPVGVPPPQGYPPEGYPKDAYPPQGYPPQGYPQQGYPPQGYPQQG-YPQQGY 60

Query: 61  PPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF 102
           PPPYAPQY  PP  QQQ SS G L+GCLAALCCCCLLDACF
Sbjct: 61  PPPYAPQYPPPPQHQQQQSSPGFLEGCLAALCCCCLLDACF 98

[Close]

BLAST of CmaCh16G003110 vs. Swiss-Prot
Match: CYT1B_ARATH (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana GN=At3g57160 PE=3 SV=2)

HSP 1 Score: 96.7 bits (239), Expect = 1.6e-19
Identity = 67/101 (66.34%), Postives = 71/101 (70.30%), Query Frame = 1


Query: 5   NQGQAPVGVPPPQGYPPEGYPKDAYPPPG--YPPQGYPPP-GYPPQGYPPPGAYPPQGYP 64
           +Q    VGVPP   YP EG PKDAYPPPG  YP QGYPPP GYP QGYPP G YPPQGYP
Sbjct: 2   SQQPPAVGVPPSHAYPAEGPPKDAYPPPGQPYPQQGYPPPQGYPQQGYPPQG-YPPQGYP 61

Query: 65  PPYAPQYGQPPPPQQQSSSS-GCLQGCLAALCCCCLLDACF 102
               PQ G PP  QQQ   S G L+GC+AALCC C+LDACF
Sbjct: 62  EQGYPQQGYPPQQQQQQKHSPGMLEGCIAALCCYCVLDACF 101

[Close]

BLAST of CmaCh16G003110 vs. Swiss-Prot
Match: CYTM1_DANRE (Cysteine-rich and transmembrane domain-containing protein 1 OS=Danio rerio GN=cystm1 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.3e-10
Identity = 56/114 (49.12%), Postives = 57/114 (50.00%), Query Frame = 1


Query: 4   YNQGQAPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYP--PQGYP 63
           Y Q  A  G  P  GYP +GYP   YP  GYP QGYPP GYP QGYP  G YP  P G P
Sbjct: 3   YEQPPAYTGPGPAPGYPAQGYPAQGYPTQGYPAQGYPPQGYPAQGYPAQG-YPNYPPGPP 62

Query: 64  PPYAPQ-----YGQPPPP------------QQQSSSSGCLQGCLAALCCCCLLD 99
            PY  Q     Y QP PP              QS    CL  C AALCCCCL D
Sbjct: 63  GPYTAQPGYQGYPQPGPPTNTVYVVEQGRRDDQSGEQACLATCWAALCCCCLCD 115

[Close]

BLAST of CmaCh16G003110 vs. Swiss-Prot
Match: OPSD_ENTDO (Rhodopsin OS=Enteroctopus dofleini GN=RHO PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-09
Identity = 42/55 (76.36%), Postives = 44/55 (80.00%), Query Frame = 1


Query: 14  PPPQGYPPEGYP-KDAYPPP-GYPPQGYPPPGYPPQGYPPPGAYP----PQGYPP 63
           PPPQGYPP+GYP + AYPPP GYPPQGYPP GYPPQGYPP GA P    PQG PP
Sbjct: 391 PPPQGYPPQGYPPQGAYPPPQGYPPQGYPPQGYPPQGYPPQGAPPQVEAPQGAPP 445

[Close]

BLAST of CmaCh16G003110 vs. Swiss-Prot
Match: OPSD_ALLSU (Rhodopsin (Fragment) OS=Alloteuthis subulata GN=RHO PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.8e-08
Identity = 40/56 (71.43%), Postives = 41/56 (73.21%), Query Frame = 1


Query: 15  PPQGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGY-PPPGAYPPQGYPPPYAPQYG 70
           PPQGYPP+GYP    PP GYPPQGYPP GYPPQGY PPP   PPQG PP  AP  G
Sbjct: 384 PPQGYPPQGYPPP--PPQGYPPQGYPPQGYPPQGYPPPPQGPPPQGPPPQAAPPQG 437

[Close]

BLAST of CmaCh16G003110 vs. TrEMBL
Match: A0A0A0KWC5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000680 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 5.8e-37
Identity = 83/101 (82.18%), Postives = 85/101 (84.16%), Query Frame = 1


Query: 1   MSYYNQGQAPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
           MSYYNQGQ P+GVPPPQGYPPEGYPKDAYPPPG          YPPQGYPPPGAYPPQGY
Sbjct: 1   MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPG----------YPPQGYPPPGAYPPQGY 60

Query: 61  PPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF 102
           PPPYAPQY QPPP QQ SS  GCL+GCLAALCCCCLLDACF
Sbjct: 61  PPPYAPQYAQPPPQQQHSSGPGCLEGCLAALCCCCLLDACF 91

[Close]

BLAST of CmaCh16G003110 vs. TrEMBL
Match: I1JAY1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G242200 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 3.2e-35
Identity = 83/106 (78.30%), Postives = 86/106 (81.13%), Query Frame = 1


Query: 1   MSYYNQGQAPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPP--- 60
           MSYYNQ Q PVGVPPPQGYPPEGY K+ YPPPGYPP GYPP GYPP GYPP   YPP   
Sbjct: 1   MSYYNQQQPPVGVPPPQGYPPEGYGKEGYPPPGYPPAGYPPAGYPPPGYPPQQGYPPPPY 60

Query: 61  --QGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF 102
             QGYPPPYAPQY QPPP QQ S+  GCL+GCLAALCCCCLLDACF
Sbjct: 61  PAQGYPPPYAPQYAQPPPRQQNSTGPGCLEGCLAALCCCCLLDACF 106

[Close]

BLAST of CmaCh16G003110 vs. TrEMBL
Match: V7CGF5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G051400g PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.1e-34
Identity = 87/104 (83.65%), Postives = 90/104 (86.54%), Query Frame = 1


Query: 1   MSYYNQGQA-PVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGYPP-QGYPPPGAYPPQ 60
           MSYYNQ Q  PVGVPPPQGYPPEGY K+ YPPPGYPP GYPPPGYPP QGYPPP  YP Q
Sbjct: 1   MSYYNQHQQPPVGVPPPQGYPPEGYGKEGYPPPGYPPPGYPPPGYPPQQGYPPP-PYPAQ 60

Query: 61  GYPPPYAPQYGQPPPPQQQSS-SSGCLQGCLAALCCCCLLDACF 102
           GYPPPYAPQY  PPP QQQ+S SSGCL+GCLAALCCCCLLDACF
Sbjct: 61  GYPPPYAPQYAPPPPQQQQNSQSSGCLEGCLAALCCCCLLDACF 103

[Close]

BLAST of CmaCh16G003110 vs. TrEMBL
Match: U5G3V1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s09010g PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.5e-34
Identity = 85/101 (84.16%), Postives = 87/101 (86.14%), Query Frame = 1


Query: 1   MSYYNQGQAPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
           MSYYNQ Q PVGVPPPQGYPPEGYPKDAYPPPGYPPQGY P GYPPQGYPP G YPP   
Sbjct: 1   MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPPGYPPQGY-PQGYPPQGYPPQG-YPP--- 60

Query: 61  PPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF 102
           PPPYAPQYGQPP  QQ SS  GC++GCLAALCCCCLLDACF
Sbjct: 61  PPPYAPQYGQPPRQQQGSSGPGCMEGCLAALCCCCLLDACF 96

[Close]

BLAST of CmaCh16G003110 vs. TrEMBL
Match: A0A022RH20_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a021603mg PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 4.6e-34
Identity = 84/103 (81.55%), Postives = 86/103 (83.50%), Query Frame = 1


Query: 1   MSYYNQGQAPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
           MSYYNQ Q PVGVPPPQGYPPEGYPKDAYPP GYPPQGYPP GYPPQGYP     P QGY
Sbjct: 1   MSYYNQNQPPVGVPPPQGYPPEGYPKDAYPPAGYPPQGYPPQGYPPQGYP-----PQQGY 60

Query: 61  PPPYAPQYGQPPPP--QQQSSSSGCLQGCLAALCCCCLLDACF 102
           P    PQYGQPPPP  QQQS SSGC++GCLAALCCCCLLDACF
Sbjct: 61  P----PQYGQPPPPQQQQQSGSSGCMEGCLAALCCCCLLDACF 94

[Close]

BLAST of CmaCh16G003110 vs. TAIR10
Match: AT2G41420.1 (AT2G41420.1 proline-rich family protein)

HSP 1 Score: 142.5 bits (358), Expect = 1.4e-34
Identity = 82/101 (81.19%), Postives = 83/101 (82.18%), Query Frame = 1


Query: 1   MSYYNQGQAPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
           MS YNQ   PVGVPPPQGYPPEGYPKDAYPP GYPPQGYP  GYPPQGYP  G YP QGY
Sbjct: 1   MSQYNQ--PPVGVPPPQGYPPEGYPKDAYPPQGYPPQGYPQQGYPPQGYPQQG-YPQQGY 60

Query: 61  PPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF 102
           PPPYAPQY  PP  QQQ SS G L+GCLAALCCCCLLDACF
Sbjct: 61  PPPYAPQYPPPPQHQQQQSSPGFLEGCLAALCCCCLLDACF 98

[Close]

BLAST of CmaCh16G003110 vs. TAIR10
Match: AT5G67600.1 (AT5G67600.1 unknown protein)

HSP 1 Score: 98.2 bits (243), Expect = 3.1e-21
Identity = 64/98 (65.31%), Postives = 68/98 (69.39%), Query Frame = 1


Query: 4   YNQGQAPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPP 63
           Y+Q Q PVG PPPQGYP    PKD YPP GYPP GYPPPGY  QG      YP QGYPP 
Sbjct: 2   YHQEQHPVGAPPPQGYP----PKDGYPPAGYPPAGYPPPGY-AQG------YPAQGYPP- 61

Query: 64  YAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF 102
             PQY Q P   QQ  ++G L+GCLAALCCCCLLDACF
Sbjct: 62  --PQYSQAP---QQKQNAGMLEGCLAALCCCCLLDACF 82

[Close]

BLAST of CmaCh16G003110 vs. TAIR10
Match: AT3G49845.1 (AT3G49845.1 unknown protein)

HSP 1 Score: 89.0 bits (219), Expect = 1.9e-18
Identity = 65/122 (53.28%), Postives = 70/122 (57.38%), Query Frame = 1


Query: 4   YNQGQAPVGVPPPQGYPP-EGYPKDAYPPP-GYPPQGYPPPGYPPQGYPPP-----GAYP 63
           Y   Q PV  PPPQGYPP EGYP   YPPP GYPP  YP  GYPP GYPPP       YP
Sbjct: 3   YQDPQHPVSAPPPQGYPPKEGYPPAGYPPPAGYPPPQYPQAGYPPAGYPPPQQGYGQGYP 62

Query: 64  PQGYPPPYAPQ-------YGQPPPP----------QQQSSSSGCLQGCLAALCCCCLLDA 102
            QGYPPP  PQ       Y  PPPP          + +  S G ++GCLA LCCC LL+A
Sbjct: 63  AQGYPPPQYPQGHPPQYPYQGPPPPHYGQAPPKNKKDKKDSGGFMEGCLAMLCCCVLLEA 122

[Close]

BLAST of CmaCh16G003110 vs. TAIR10
Match: AT5G45350.1 (AT5G45350.1 proline-rich family protein)

HSP 1 Score: 54.3 bits (129), Expect = 5.1e-08
Identity = 47/98 (47.96%), Postives = 52/98 (53.06%), Query Frame = 1


Query: 7   GQAPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPP-PGAYPPQ----GYP 66
           G  P G PPP  YPP GYP+  YPP   PP  YPP GYPP  YPP PG YPP     GYP
Sbjct: 15  GYPPAGYPPPGAYPPAGYPQQGYPP---PPGAYPPAGYPPGAYPPAPGGYPPAPGYGGYP 74

Query: 67  P-------PYAPQYGQPPP---PQQQSSSSGCLQGCLA 90
           P       P AP +G  PP   P   S  +G + G +A
Sbjct: 75  PAPGYGGYPPAPGHGGYPPAGYPAHHSGHAGGIGGMIA 109

[Close]

BLAST of CmaCh16G003110 vs. TAIR10
Match: AT1G31750.1 (AT1G31750.1 proline-rich family protein)

HSP 1 Score: 53.5 bits (127), Expect = 8.6e-08
Identity = 40/59 (67.80%), Postives = 42/59 (71.19%), Query Frame = 1


Query: 15 PPQGYPPEGYPKDAYPPP-GYPPQGYPPP--GYPPQGY-PPPGAYPPQGYPPPYAPQYG 70
          PP  YPP   P+ AYPPP GYPPQGYPPP  GYPP  Y PPPGAYPP GYP P  P+ G
Sbjct: 25 PPGAYPPP--PQGAYPPPGGYPPQGYPPPPHGYPPAAYPPPPGAYPPAGYPGPSGPRPG 81

[Close]

BLAST of CmaCh16G003110 vs. NCBI nr
Match: gi|778689152|ref|XP_011652909.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis sativus])

HSP 1 Score: 161.4 bits (407), Expect = 8.3e-37
Identity = 83/101 (82.18%), Postives = 85/101 (84.16%), Query Frame = 1


Query: 1   MSYYNQGQAPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
           MSYYNQGQ P+GVPPPQGYPPEGYPKDAYPPPG          YPPQGYPPPGAYPPQGY
Sbjct: 1   MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPG----------YPPQGYPPPGAYPPQGY 60

Query: 61  PPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF 102
           PPPYAPQY QPPP QQ SS  GCL+GCLAALCCCCLLDACF
Sbjct: 61  PPPYAPQYAQPPPQQQHSSGPGCLEGCLAALCCCCLLDACF 91

[Close]

BLAST of CmaCh16G003110 vs. NCBI nr
Match: gi|659108830|ref|XP_008454408.1| (PREDICTED: CYSTM1 family protein A-like [Cucumis melo])

HSP 1 Score: 160.2 bits (404), Expect = 1.9e-36
Identity = 84/101 (83.17%), Postives = 86/101 (85.15%), Query Frame = 1


Query: 1   MSYYNQGQAPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
           MSYYNQGQ P+GVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPG          AYPPQGY
Sbjct: 1   MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPG----------AYPPQGY 60

Query: 61  PPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF 102
           PPPYAPQY QPPP QQQSS  GCL+GCLAALCCCCLLDACF
Sbjct: 61  PPPYAPQYAQPPP-QQQSSGPGCLEGCLAALCCCCLLDACF 90

[Close]

BLAST of CmaCh16G003110 vs. NCBI nr
Match: gi|694401186|ref|XP_009375656.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Pyrus x bretschneideri])

HSP 1 Score: 157.9 bits (398), Expect = 9.2e-36
Identity = 84/101 (83.17%), Postives = 86/101 (85.15%), Query Frame = 1


Query: 1   MSYYNQGQAPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
           MSYYNQ Q PVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPP    QGYP       QGY
Sbjct: 1   MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPP----QGYP-------QGY 60

Query: 61  PPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF 102
           PPPYAPQY QPPP QQQSSSSGC++GCLAALCCCCLLDACF
Sbjct: 61  PPPYAPQYAQPPPQQQQSSSSGCMEGCLAALCCCCLLDACF 90

[Close]

BLAST of CmaCh16G003110 vs. NCBI nr
Match: gi|571436869|ref|XP_006573901.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Glycine max])

HSP 1 Score: 155.6 bits (392), Expect = 4.6e-35
Identity = 83/106 (78.30%), Postives = 86/106 (81.13%), Query Frame = 1


Query: 1   MSYYNQGQAPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPP--- 60
           MSYYNQ Q PVGVPPPQGYPPEGY K+ YPPPGYPP GYPP GYPP GYPP   YPP   
Sbjct: 1   MSYYNQQQPPVGVPPPQGYPPEGYGKEGYPPPGYPPAGYPPAGYPPPGYPPQQGYPPPPY 60

Query: 61  --QGYPPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF 102
             QGYPPPYAPQY QPPP QQ S+  GCL+GCLAALCCCCLLDACF
Sbjct: 61  PAQGYPPPYAPQYAQPPPRQQNSTGPGCLEGCLAALCCCCLLDACF 106

[Close]

BLAST of CmaCh16G003110 vs. NCBI nr
Match: gi|657954637|ref|XP_008368761.1| (PREDICTED: CYSTM1 family protein A [Malus domestica])

HSP 1 Score: 154.5 bits (389), Expect = 1.0e-34
Identity = 83/101 (82.18%), Postives = 85/101 (84.16%), Query Frame = 1


Query: 1   MSYYNQGQAPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
           MSYYNQ Q PVGVPPPQGYPPEGYPKDAYPPP YPPQGYPPP    QGYP       QGY
Sbjct: 1   MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPPVYPPQGYPPP----QGYP-------QGY 60

Query: 61  PPPYAPQYGQPPPPQQQSSSSGCLQGCLAALCCCCLLDACF 102
           PPPYAPQY QPPP QQQSSSSGC++GCLAALCCCCLLDACF
Sbjct: 61  PPPYAPQYAQPPPQQQQSSSSGCMEGCLAALCCCCLLDACF 90

The following BLAST results are available for this feature:

BLAST of CmaCh16G003110 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CYT1A_ARATH	2.5e-33	81.19	Cysteine-rich and transmembrane domain-containing protein A OS=Arabidopsis thali...	[more]
CYT1B_ARATH	1.6e-19	66.34	Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thali...	[more]
CYTM1_DANRE	2.3e-10	49.12	Cysteine-rich and transmembrane domain-containing protein 1 OS=Danio rerio GN=cy...	[more]
OPSD_ENTDO	1.5e-09	76.36	Rhodopsin OS=Enteroctopus dofleini GN=RHO PE=1 SV=1	[more]
OPSD_ALLSU	2.8e-08	71.43	Rhodopsin (Fragment) OS=Alloteuthis subulata GN=RHO PE=1 SV=1	[more]

BLAST of CmaCh16G003110 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWC5_CUCSA	5.8e-37	82.18	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000680 PE=4 SV=1	[more]
I1JAY1_SOYBN	3.2e-35	78.30	Uncharacterized protein OS=Glycine max GN=GLYMA_01G242200 PE=4 SV=1	[more]
V7CGF5_PHAVU	2.1e-34	83.65	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G051400g PE=4 SV=1	[more]
U5G3V1_POPTR	3.5e-34	84.16	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s09010g PE=4 SV=1	[more]
A0A022RH20_ERYGU	4.6e-34	81.55	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a021603mg PE=4 SV=1	[more]

BLAST of CmaCh16G003110 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41420.1	1.4e-34	81.19	proline-rich family protein	[more]
AT5G67600.1	3.1e-21	65.31	unknown protein	[more]
AT3G49845.1	1.9e-18	53.28	unknown protein	[more]
AT5G45350.1	5.1e-08	47.96	proline-rich family protein	[more]
AT1G31750.1	8.6e-08	67.80	proline-rich family protein	[more]

BLAST of CmaCh16G003110 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778689152\|ref\|XP_011652909.1\|	8.3e-37	82.18	PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cuc...	[more]
gi\|659108830\|ref\|XP_008454408.1\|	1.9e-36	83.17	PREDICTED: CYSTM1 family protein A-like [Cucumis melo]	[more]
gi\|694401186\|ref\|XP_009375656.1\|	9.2e-36	83.17	PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Pyrus x ...	[more]
gi\|571436869\|ref\|XP_006573901.1\|	4.6e-35	78.30	PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Glycine ...	[more]
gi\|657954637\|ref\|XP_008368761.1\|	1.0e-34	82.18	PREDICTED: CYSTM1 family protein A [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G003110.1	CmaCh16G003110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00239	RHODOPSNTAIL	coord: 15..26 score: 5.0E-5coord: 28..40 score: 5.
None	No IPR available	PANTHER	PTHR31568	FAMILY NOT NAMED	coord: 1..101 score: 1.1
None	No IPR available	PANTHER	PTHR31568:SF3	CYSTM1 FAMILY PROTEIN A-RELATED	coord: 1..101 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh16G003110	Carg19694	Silver-seed gourd	carcmaB0406

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh16G003110	Cucumber (Gy14) v2	cgybcmaB494
CmaCh16G003110	Melon (DHL92) v3.6.1	cmamedB331
CmaCh16G003110	Melon (DHL92) v3.6.1	cmamedB354
CmaCh16G003110	Silver-seed gourd	carcmaB0526
CmaCh16G003110	Cucumber (Chinese Long) v3	cmacucB0388
CmaCh16G003110	Cucumber (Chinese Long) v3	cmacucB0414
CmaCh16G003110	Watermelon (97103) v2	cmawmbB332
CmaCh16G003110	Watermelon (97103) v2	cmawmbB342
CmaCh16G003110	Wax gourd	cmawgoB0410
CmaCh16G003110	Cucurbita maxima (Rimu)	cmacmaB135
CmaCh16G003110	Cucurbita maxima (Rimu)	cmacmaB340
CmaCh16G003110	Cucurbita maxima (Rimu)	cmacmaB351
CmaCh16G003110	Cucumber (Gy14) v1	cgycmaB0623
CmaCh16G003110	Cucumber (Gy14) v1	cgycmaB0824
CmaCh16G003110	Cucurbita moschata (Rifu)	cmacmoB318
CmaCh16G003110	Cucurbita moschata (Rifu)	cmacmoB322
CmaCh16G003110	Cucurbita moschata (Rifu)	cmacmoB338
CmaCh16G003110	Wild cucumber (PI 183967)	cmacpiB338
CmaCh16G003110	Wild cucumber (PI 183967)	cmacpiB351
CmaCh16G003110	Cucumber (Chinese Long) v2	cmacuB333
CmaCh16G003110	Cucumber (Chinese Long) v2	cmacuB348
CmaCh16G003110	Melon (DHL92) v3.5.1	cmameB287
CmaCh16G003110	Melon (DHL92) v3.5.1	cmameB303
CmaCh16G003110	Watermelon (Charleston Gray)	cmawcgB280
CmaCh16G003110	Watermelon (Charleston Gray)	cmawcgB293
CmaCh16G003110	Watermelon (97103) v1	cmawmB293
CmaCh16G003110	Cucurbita pepo (Zucchini)	cmacpeB344
CmaCh16G003110	Cucurbita pepo (Zucchini)	cmacpeB351
CmaCh16G003110	Bottle gourd (USVL1VR-Ls)	cmalsiB307