CmoCh12G002950 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCCAAATCCCTCTCTTCACCCATCCTCCTCCTCTCTCTCCTCCTCTGTTTATCCCTCTCCGCCGCCTCTCCCTGCAACCAGCCCAAAATCAAGCCGTCGCCAGCCAAAAAGAAACCGGCAAACCCCAAAATCATCCGCCCGCCGTCGTCATCTCCGGCAGTACAAACAGCTTACTGCCCAAAAGACACCGTGAAATTCAGTGTTTGTACCAACATTCTCGGAATCGGCAGCCTCATCGGAAGCCCTGTTTCGAGCAAATGCTGCGATTTGCTTGCTGGGTTGACGAATCTTGAGGCGGCGGCTTGTCTTTGCACTGCAATTAAAGCCAATGTTCTTGGAATTAACTTGGATGTTCCTGTTTCCTTTAGCTTGCTGGTTAGCTCTTGCAAGAAATCTGTGCCTGCTGGGTACCGGTGTAAATGAAGCAGATAAGAACACTGTGATGGAACCTTCTGGAAAGTTCGTGCTTTGTTTTGTGGATCTTGTTCGTTATTGTTCGTTGTTTTCGTTTATGTTCTTGTTTCATTTGGTCGTGTTTTTTCATGTTTCGTGGGTTTATTAAATGTTCTTTTTCCCCTCTTGATTTCACTCGTCATTACTCTCGTTCAGTGTTAATAAATTTGTGGACTTCTTTCCATCAAATTCGTTCGATTTCTCGTTTTGCACGTGTATATCGTTACTTTAAATGTAGAGTAATATACGTTTAGACACTTAACGTCGATAATGTCGGTTAGGAAGAGCTTTCCCCACTCTTATAAAAACATGTTTGGTTCCTCTTTACTGATGTGGATCTCACCACCCACAATCTTCGTTTCTCTCTCTAACTGGTGTGGATCTCACCATCCACCGTCTTTGCTAGCTCACCCCCCAGTGTCTAGCTCTATTACCATTTGTAACGGCCCAAACTCACCTCTAGCAGACATTTAACGTCGATAATATTTGTAACAGCTCAAACTCACCACTAGTAGAAATTGTTTGTTTTAACTCATTACGTATTATCGTTAGTCTTACAGTATTAAAAATGCGTATCTTAAGAAAAGGTTTCCACCCCTTTTATAAGGAATGCTTCGTTCCCCTCCTTAACCGATGTGGAATCTCATAACCTACCTCCCCTGGGGCCAGTGTTCTTGCTAGCACACCGCCCAGTATCTGGCTCTGATACCATTTGTAACAGCTCAAGCCCATCATTAGCAGATATTGTCTGCTTTTGTTCCTTACGTATCGTCATCAGCCTCACGATTTTAAAACGTATCTGTTAGAGAATTTTCTACACTTTTATAAGAAATTATTCGTTCCCTCTCCAACTAATATAGGATCTCACAATATCTCATAACCTACCTCCCCAACCGATGTGGGATCTCAAAACCTACCTCCCTTGGGGGCACAGTGGTTTGGCACACCGCTCGATGTCTGGCTCTGATACCACTTGTAACAGCTCAAGCTCACTATTAGCAAATATTGTCTGCTTTGGTTTGTTATATATCATCGTCAGCCTCACGATTTTAAAACGTTTCTGTTAGAGAGAAGTTTCCACGCTTTTATAAGAAATGATTCGTTTCTCTCTCCAATTAATATAGGATCTTACAGTACCTCAACGTTAACAGCATACATTCAAACCTATGGTCATTTCGTTGAAAAGCTAGTTGTAAAGGTCCAAAGGCTCAGGCTAGTTGCAAAAGTGTCTTGACTCCACATTGGCGTTGAGATGCCATCCTCTCCGGATTTGAGTCAAATCATCATTTTCTCGACTTAATTGTTCAATTTTAATTTTGATTATCCAAAACGCTTCAATTAACATCAAGTTGATTGATCGTTATTAAATAGGCAAATAAGAACATGAGTAAGGATATTAACATGAAATTAGACACATAAATAGAATGTTTTAGGTGATATCATTAATGTCAACTTCTCCCAGTAACACGTTTTAGTGATTTTGTTTCTATTTTCTACCATGATCAGCTAGATCTCTCTCAATTTGTTCATGATGAACCCTATATAGTAACTTTATTGGATTAAATCATGAACATAGGCTCTTTACAATACGATTCGAACCTGTTACCCGAATATCATACAAAAATCCCATAGAAAAAGCGAATGTTCGCGGCAAATCGGAATCGCGGCTTTATCTCGCCTCCCTGTTTACGATATAGGTCTTCCCCGCCATATCTGCCGTCTGCGATTCTCTTGTGATTCCTCGTTGAATCACCGATTTGATTACCTCGATTAGGGGAAATTAGGGGAGAAATTTCCAGATTGATCGCCTTCGCCGCTGCCGTAGGGAATCGATTGGAGCCCTCCTCCTCGAAAATCGGTATATTCTAAACATCTTGATCTTCGCTAGTGTTTGTTTTAAGATTATTGTACGCTTTTTTGCTTTTTCTGTTTCTGATTTGATATGATATAGCTTTCGTTGGAAGTTTGGTGGATTTTTGTTTTCTGTGTTCATAATGGATGCGGCACTATTTGGCCATAGGATGCTCACATGGAGTGACGTTAGGGTATGACAAGACAATGCCATCTTAGGCTTCTTTCCAAAATCATCG ATGGCCTCCAAATCCCTCTCTTCACCCATCCTCCTCCTCTCTCTCCTCCTCTGTTTATCCCTCTCCGCCGCCTCTCCCTGCAACCAGCCCAAAATCAAGCCGTCGCCAGCCAAAAAGAAACCGGCAAACCCCAAAATCATCCGCCCGCCGTCGTCATCTCCGGCAGTACAAACAGCTTACTGCCCAAAAGACACCGTGAAATTCAGTGTTTGTACCAACATTCTCGGAATCGGCAGCCTCATCGGAAGCCCTGTTTCGAGCAAATGCTGCGATTTGCTTGCTGGGTTGACGAATCTTGAGGCGGCGGCTTGTCTTTGCACTGCAATTAAAGCCAATGTTCTTGGAATTAACTTGGATGTTCCTGTTTCCTTTAGCTTGCTGGTTAGCTCTTGCAAGAAATCTGTGCCTGCTGGTTCGTGCTTTGTTTTGTGGATCTTGTTCGTTATTGTTCGTTGTTTTCGTTTATGTTCTTGTTTCATTTGGTCGTGTTTTTTCATGTTTCGTGGGTTTATTAAATGTTCTTTTTCCCCTCTTGATTTCACTCGTCATTACTCTCGTTCAGTGTTAATAAATTTGTGGACTTCTTTCCATCAAATTCGTTCGATTTCTCGTTTTGCACGTGCTCTTTACAATACGATTCGAACCTGTTACCCGAATATCATACAAAAATCCCATAGAAAAAGCGAATGTTCGCGGCAAATCGGAATCGCGGCTTTATCTCGCCTCCCTGTTTACGATATAGGGGAAATTAGGGGAGAAATTTCCAGATTGATCGCCTTCGCCGCTGCCGTAGGGAATCGATTGGAGCCCTCCTCCTCGAAAATCGGATGCTCACATGGAGTGACGTTAGGGTATGACAAGACAATGCCATCTTAGGCTTCTTTCCAAAATCATCG ATGGCCTCCAAATCCCTCTCTTCACCCATCCTCCTCCTCTCTCTCCTCCTCTGTTTATCCCTCTCCGCCGCCTCTCCCTGCAACCAGCCCAAAATCAAGCCGTCGCCAGCCAAAAAGAAACCGGCAAACCCCAAAATCATCCGCCCGCCGTCGTCATCTCCGGCAGTACAAACAGCTTACTGCCCAAAAGACACCGTGAAATTCAGTGTTTGTACCAACATTCTCGGAATCGGCAGCCTCATCGGAAGCCCTGTTTCGAGCAAATGCTGCGATTTGCTTGCTGGGTTGACGAATCTTGAGGCGGCGGCTTGTCTTTGCACTGCAATTAAAGCCAATGTTCTTGGAATTAACTTGGATGTTCCTGTTTCCTTTAGCTTGCTGGTTAGCTCTTGCAAGAAATCTGTGCCTGCTGGTTCGTGCTTTGTTTTGTGGATCTTGTTCGTTATTGTTCGTTGTTTTCGTTTATGTTCTTGTTTCATTTGGTCGTGTTTTTTCATGTTTCGTGGGTTTATTAAATGTTCTTTTTCCCCTCTTGATTTCACTCGTCATTACTCTCGTTCAGTGTTAATAAATTTGTGGACTTCTTTCCATCAAATTCGTTCGATTTCTCGTTTTGCACGTGCTCTTTACAATACGATTCGAACCTGTTACCCGAATATCATACAAAAATCCCATAGAAAAAGCGAATGTTCGCGGCAAATCGGAATCGCGGCTTTATCTCGCCTCCCTGTTTACGATATAGGGGAAATTAGGGGAGAAATTTCCAGATTGATCGCCTTCGCCGCTGCCGTAGGGAATCGATTGGAGCCCTCCTCCTCGAAAATCGGATGCTCACATGGAGTGACGTTAGGGTATGACAAGACAATGCCATCTTAG
BLAST of CmoCh12G002950 vs. Swiss-Prot
Match: ERLL1_ARATH (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana GN=AZI1 PE=1 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 3.5e-19 Identity = 64/158 (40.51%), Postives = 94/158 (59.49%), Query Frame = 1
BLAST of CmoCh12G002950 vs. Swiss-Prot
Match: 14KD_DAUCA (14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 7.8e-19 Identity = 60/143 (41.96%), Postives = 84/143 (58.74%), Query Frame = 1
BLAST of CmoCh12G002950 vs. Swiss-Prot
Match: ERLI1_ARATH (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana GN=EARLI1 PE=1 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.5e-17 Identity = 65/164 (39.63%), Postives = 95/164 (57.93%), Query Frame = 1
BLAST of CmoCh12G002950 vs. Swiss-Prot
Match: ERLL2_ARATH (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana GN=At4g12490 PE=2 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.8e-15 Identity = 48/118 (40.68%), Postives = 71/118 (60.17%), Query Frame = 1
BLAST of CmoCh12G002950 vs. Swiss-Prot
Match: LBP65_ARATH (Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana GN=At4g00165 PE=2 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.3e-15 Identity = 56/138 (40.58%), Postives = 83/138 (60.14%), Query Frame = 1
BLAST of CmoCh12G002950 vs. TrEMBL
Match: A0A0A0LPN2_CUCSA (Proline-rich protein DC2.15 OS=Cucumis sativus GN=Csa_2G381890 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 1.6e-42 Identity = 104/143 (72.73%), Postives = 125/143 (87.41%), Query Frame = 1
BLAST of CmoCh12G002950 vs. TrEMBL
Match: A0A061GJ47_THECC (Bimodular protein OS=Theobroma cacao GN=TCM_036975 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 6.0e-26 Identity = 74/139 (53.24%), Postives = 99/139 (71.22%), Query Frame = 1
BLAST of CmoCh12G002950 vs. TrEMBL
Match: F6H3H9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g05640 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 2.3e-25 Identity = 78/141 (55.32%), Postives = 98/141 (69.50%), Query Frame = 1
BLAST of CmoCh12G002950 vs. TrEMBL
Match: G7I725_MEDTR (Protease inhibitor/seed storage/LTP family protein OS=Medicago truncatula GN=MTR_1g012710 PE=2 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 8.6e-25 Identity = 73/147 (49.66%), Postives = 99/147 (67.35%), Query Frame = 1
BLAST of CmoCh12G002950 vs. TrEMBL
Match: P93512_BRANA (Proline-rich SAC51 protein OS=Brassica napus GN=proline-rich SAC51 PE=2 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 7.3e-24 Identity = 65/140 (46.43%), Postives = 90/140 (64.29%), Query Frame = 1
BLAST of CmoCh12G002950 vs. TAIR10
Match: AT1G62510.1 (AT1G62510.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 112.5 bits (280), Expect = 4.5e-25 Identity = 67/146 (45.89%), Postives = 90/146 (61.64%), Query Frame = 1
BLAST of CmoCh12G002950 vs. TAIR10
Match: AT2G45180.1 (AT2G45180.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 105.1 bits (261), Expect = 7.2e-23 Identity = 66/140 (47.14%), Postives = 89/140 (63.57%), Query Frame = 1
BLAST of CmoCh12G002950 vs. TAIR10
Match: AT1G12090.1 (AT1G12090.1 extensin-like protein) HSP 1 Score: 100.1 bits (248), Expect = 2.3e-21 Identity = 61/145 (42.07%), Postives = 85/145 (58.62%), Query Frame = 1
BLAST of CmoCh12G002950 vs. TAIR10
Match: AT4G12470.1 (AT4G12470.1 azelaic acid induced 1) HSP 1 Score: 97.1 bits (240), Expect = 2.0e-20 Identity = 64/158 (40.51%), Postives = 94/158 (59.49%), Query Frame = 1
BLAST of CmoCh12G002950 vs. TAIR10
Match: AT4G12510.1 (AT4G12510.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 94.4 bits (233), Expect = 1.3e-19 Identity = 63/144 (43.75%), Postives = 81/144 (56.25%), Query Frame = 1
BLAST of CmoCh12G002950 vs. NCBI nr
Match: gi|659088926|ref|XP_008445235.1| (PREDICTED: pEARLI1-like lipid transfer protein 1 [Cucumis melo]) HSP 1 Score: 186.0 bits (471), Expect = 9.1e-44 Identity = 106/143 (74.13%), Postives = 127/143 (88.81%), Query Frame = 1
BLAST of CmoCh12G002950 vs. NCBI nr
Match: gi|449441902|ref|XP_004138721.1| (PREDICTED: pEARLI1-like lipid transfer protein 1 [Cucumis sativus]) HSP 1 Score: 181.4 bits (459), Expect = 2.2e-42 Identity = 104/143 (72.73%), Postives = 125/143 (87.41%), Query Frame = 1
BLAST of CmoCh12G002950 vs. NCBI nr
Match: gi|590572334|ref|XP_007011824.1| (Bimodular protein [Theobroma cacao]) HSP 1 Score: 126.3 bits (316), Expect = 8.6e-26 Identity = 74/139 (53.24%), Postives = 99/139 (71.22%), Query Frame = 1
BLAST of CmoCh12G002950 vs. NCBI nr
Match: gi|225430322|ref|XP_002285197.1| (PREDICTED: putative lipid-binding protein At4g00165 [Vitis vinifera]) HSP 1 Score: 124.4 bits (311), Expect = 3.3e-25 Identity = 78/141 (55.32%), Postives = 98/141 (69.50%), Query Frame = 1
BLAST of CmoCh12G002950 vs. NCBI nr
Match: gi|357437019|ref|XP_003588785.1| (protease inhibitor/seed storage/LTP family protein [Medicago truncatula]) HSP 1 Score: 122.5 bits (306), Expect = 1.2e-24 Identity = 73/147 (49.66%), Postives = 99/147 (67.35%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |