CmoCh08G002440 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh08G002440
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Peptidyl-prolyl cis-trans isomerase
Location	Cmo_Chr08 : 1483536 .. 1487198 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATCAATAACAAAGATTTATACAATTTCTGATATGTTGAAAGATTTTCAATATGATCGGTGGAGATAACGAAAATGTCTGAAATGTAGCCCGATCACCGCTTCTTCTGACGCGTCTCTCTAGATTTGCGACGAATCAGCCAATTTTTTTGGATCAGGTAATGAAAATTAGTTTGTTTAATTGTTAATCTGCTTCTTATTTCCCTTTACGAGATATTATTATTTGGATTTTAGCAATCGATCAACACAATCGCACTCTCAGAACAAATTCCAGGTGAATAATGAAGGCTTCTCTAATTTTCTTCTTGCTTGCGTGCACTTCAGGTATGCTATTCTATTGTATTGTGATCGTAGTTCGTCATAAATCGGTTGTCGTTCTTCCGATTCCATTTAATGGATTCATTTTTGTTGGTGGTTTGAATTAATTTCAGTCTACGCGATGTCGGATGAAGATGTAACTGAGTTACAGATTGATGTTACGGTAATTTGTTTATTTTATCTATTATTTCAGAAATTGGTTCTGATTTTTCGTACATTATTCCTTTTGCTATGAATCTGGAGGTCTCTCCATTTTCAAGTTTGATAGGAATTTAACGATCTTGGATACTAACGAATGGATTTTATGTTCTACAAGTTGTTCTTGTCTAGTGAAAGCTCTATGGTCACTGACACTGTAATATTACAGACTTATGAACGTATATTTGACTTGCATGTTGTTAAAATGAGATCCATATGTCCAATGAAAAGTGTAAAGTTGTGTTAGTTTCTGGATTGTGTTGAGATCAATTTATGAGATGGAGTTTTCCCCCTGTCATAATATGAAGTGAATTTGATATGAATATGTCGTCTTCTTCACAAAAAAAATTCCTCTGAGACCTTCATTGAGCTGTTCCCGTGGGGTAGGAAAATGAATTGTGGAACTTTTCTTTGAAATGATTCATAGGTCCGACTCGCTAAGGCTTGACTAAGAGTCTCATTAGGGCATCCTCCCCCACCATTCCGGCCTATTATTCATAGGGATTTGACCGATGGGGAAGGTATTGATCCCATTCATTAGTTCGACATTATTTGAGGAAGTAGGTCAACATGCTTGAATTGATTCCTAGCCTTGATGCTAGTATAACGCAATTGAACTTTTCTTTTGGTAACATTTTGAGCCTAAGTCCCAGGTGGGAAGTTGAGCCATGAGAATCAATAACCACTGATAATGGTCTTATAAAGTTGTAATTTCTGCAATTTTGTGAGAAAACGTTGAATGGTCAGATCTTTTGGTTACTCTCATACTTTTGTATCGCGAAATTAACGTTAGCTGGTAATGTGGTAAAGAACTGCTTGACGAAGAGGCAGTTAGTCTTTTCCATTATTGCTCAGACAAACATCTACTATATGCTAAAATATGAATTTGGTTTCATGAGATCCGTGTCTGCAAGTTGCGTTTTTTCCCTAGCTTTTCACAGTTCCAATGAATGTTTGATATTGCACTGCCAGCCTTTAGATTCTGGAATGTGTTACTCTGGACCACTCCCCAAGCCTTTTCTTGCTAATTCTTTGTTTTGATGCTTTTTTTCTTTTCTCTTTGTTTCTTCTTTTGCAGAGTAGGCCATCATCTTGTGATATTGAAACTCGTAAAGGAGATAAAATCAAAGTTCATTATCGTGTAAGTTGAACAATATTTTAGTTCGACTCTTGCTTTTGTGTGTGCGCATAAAACAAACACGGTCAATTTGTTAATGAGTCAATGAATTATAAAGGAAGAATTGGGGAGATGTCAAGAGCTGGGAAGGTAAGGCACTGCCTCTGTTAGAAAAAGGGCATTCTTGATTTCACGACGGATGTTGTAATGTTCACAAATAAAACTAACTGGGTTACACCAGAATTTGAATTTGTCTGAGAACTTTATCATTCAGTATATTTGAAGGAATGATCCCGAATTTGAATCATTACACAGTTGCTGCTGATACAAACATGATAGATTGATGATTTTCACTGATATGGTTATGAACACAGTCGATTCATTTATAATTAAGATTTTTCTTTTAGCTCCGCACATCTTCTTGACTGATATCTGTTATCCTATGATTCAATAGGGGATGTTCACAGATGGGACTGTTTTTGACTCTAGTTTTGAAAGGGGTGTCCCATTTGAGTTTCAGCTTGGCGCTGGTAAAGTAATTAAAGGTATTTGTGCACAAAACACATACATCTAGTAATTAGTAGAAAAGTTTCTGGTGCAGCCAAGATAGTTTATTTGTTCTTGTTACTATTTTTATTTTTTTTTAGTTTGAATGTTTCCATATTGTTCACCATTGTCTCGACTCATGTGTTCGAGCTCAGCTGTGGTCAAGTAACAATTCATCTTTTGTGATAGATCTCTTATGAGTTGCACCATATTAGTTAATTGGTTTATTATTCTCATAATCTATAATTAGGATATATCTTGGAACTGATGTTGGTTTAAAATCCGCTCATCTGTTCATGTTGCTTGAACTTAACAAATTGCTGTACGCTCCCTCATTTTCGCGTTTTCGCGTTTTCGCATAATTTGTTCCTTCACTCGTTCAAATTTTTCATGACCTTTGATCTGTGAACTCAAGTCTACAAAATTGTATATTAAGCTCAAAAGATCCAATAAAATGGTCATTACGCAAAGATCTGTACTGAATAAACTTTGCTAATTGCTCTGTGAATACTCATTCTGATGTTGTGCATGGGAAGTTACTGAGAGTTGAAAATTCCTTCATTTTCAGGATGGGACCAAGGATTACTAGGAATGTGCGTTGGTGAGAAACGGAAATTGACCATTCCTTCAAAGTTAGGATATGGACCGCACGGCGTTCCACCAACCATACCAGGTAATCCAAGACTACCACTTATCTATAAAGAACTCAAGCTTTTACCGAACTAGTAAGGTGTTCTCGAAAGGGGACAAACAAAGATTGAATGCACTCCTATGCCATATTTGTACAAATAGAATAGTCAATTTATACATAATGGTAAAAGGGTCCCTCTATGATCATACAAGCATGAACAAGCATGCATGAACCATTTCACGAAGTATGCATCCAGATAGCCCAAAGTCTCCGATCGTTAGCTCTCGGTCTCCAATTAAAAAACAACGTCGATGAAGATGAAATCTATGGACTCTTAGAAACATTTGCATTTAATCCTTGACATTAGTTACAAGTGTTCTGAAAAGAAGCAACTATAAGGACTAATTATTTACATTAAGTTCACAACCCAACTCAAACGATGATGATTTGAATTTATTCACGGCTGAAGTATGTGGAGTTTTGTGTTGTTCCCTTGTTGGATTTTGAATATACAGGTGGTGTAACACTTGTCTTTGACACTGAGCTTGTTGCTATTAATGGGAAACCATCAAGTGGTGGAAACTCAGTCAAGGAAGAGAGTGATGATCTATAAGTGAAACCACCTATTCTACCATTGGAGCCCCTTCGGTTGAGATGCTTATCAATCTTCTCCAACTTTAGTTTCTTCCATTTTTCATACTCTTTTCACTTTCTACTTTTCCTTATAGCTACTTTAGAGTACGAGTTTTCGATTTATTTGCCTCTCGTTTAAGTTTTGATGAGATGCTAATTTACGATATTTATTTTGAATTCTTAGAATTAATGAAGAGCAACTCTCGATTTATTTGCCGCT

mRNA sequence

AAAATCAATAACAAAGATTTATACAATTTCTGATATGTTGAAAGATTTTCAATATGATCGGTGGAGATAACGAAAATGTCTGAAATGTAGCCCGATCACCGCTTCTTCTGACGCGTCTCTCTAGATTTGCGACGAATCAGCCAATTTTTTTGGATCAGCAATCGATCAACACAATCGCACTCTCAGAACAAATTCCAGGTGAATAATGAAGGCTTCTCTAATTTTCTTCTTGCTTGCGTGCACTTCAGTCTACGCGATGTCGGATGAAGATGTAACTGAGTTACAGATTGATGTTACGAGTAGGCCATCATCTTGTGATATTGAAACTCGTAAAGGAGATAAAATCAAAGTTCATTATCGTGGGATGTTCACAGATGGGACTGTTTTTGACTCTAGTTTTGAAAGGGGTGTCCCATTTGAGTTTCAGCTTGGCGCTGGTAAAGTAATTAAAGGTGGTGTAACACTTGTCTTTGACACTGAGCTTGTTGCTATTAATGGGAAACCATCAAGTGGTGGAAACTCAGTCAAGGAAGAGAGTGATGATCTATAAGTGAAACCACCTATTCTACCATTGGAGCCCCTTCGGTTGAGATGCTTATCAATCTTCTCCAACTTTAGTTTCTTCCATTTTTCATACTCTTTTCACTTTCTACTTTTCCTTATAGCTACTTTAGAGTACGAGTTTTCGATTTATTTGCCTCTCGTTTAAGTTTTGATGAGATGCTAATTTACGATATTTATTTTGAATTCTTAGAATTAATGAAGAGCAACTCTCGATTTATTTGCCGCT

Coding sequence (CDS)

ATGAAGGCTTCTCTAATTTTCTTCTTGCTTGCGTGCACTTCAGTCTACGCGATGTCGGATGAAGATGTAACTGAGTTACAGATTGATGTTACGAGTAGGCCATCATCTTGTGATATTGAAACTCGTAAAGGAGATAAAATCAAAGTTCATTATCGTGGGATGTTCACAGATGGGACTGTTTTTGACTCTAGTTTTGAAAGGGGTGTCCCATTTGAGTTTCAGCTTGGCGCTGGTAAAGTAATTAAAGGTGGTGTAACACTTGTCTTTGACACTGAGCTTGTTGCTATTAATGGGAAACCATCAAGTGGTGGAAACTCAGTCAAGGAAGAGAGTGATGATCTATAA

Homology

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BLAST of CmoCh08G002440 vs. Swiss-Prot
Match: FK151_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP15-1 OS=Arabidopsis thaliana GN=FKBP15-1 PE=2 SV=2)

HSP 1 Score: 116.7 bits (291), Expect = 1.7e-25
Identity = 68/145 (46.90%), Postives = 77/145 (53.10%), Query Frame = 1


Query: 1   MKA-SLIFFLLACTSVYAMSDEDVTELQIDVTSRPSSCDIETRKGDKIKVHYRGMFTDGT 60
           MKA   +  L   T  YA    DVTELQI V  +P  CD++  KGDKIKVHYRG  TDGT
Sbjct: 8   MKAVGFLLLLTILTLAYAKKSGDVTELQIGVKYKPQKCDLQAHKGDKIKVHYRGKLTDGT 67

Query: 61  VFDSSFERGVPFEFQLGAGKV-----------------------------------IKGG 110
           VFDSSFERG P EF+LG G+V                                   I GG
Sbjct: 68  VFDSSFERGDPIEFELGTGQVIPGWDQGLLGACVGEKRKLKIPSKLGYGDNGSPPKIPGG 127

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BLAST of CmoCh08G002440 vs. Swiss-Prot
Match: FK152_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP15-2 OS=Arabidopsis thaliana GN=FKBP15-2 PE=2 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 6.3e-25
Identity = 64/144 (44.44%), Postives = 80/144 (55.56%), Query Frame = 1


Query: 5   LIFFLLACTSVYAMSDEDVTELQIDVTSRPSSCDIETRKGDKIKVHYRGMFTDGTVFDSS 64
           LIFF L     +A    DV+ELQI V  +P +C+++  KGD IKVHYRG  TDGTVFDSS
Sbjct: 13  LIFFSLISLQGFAKKTGDVSELQIGVKFKPKTCEVQAHKGDTIKVHYRGKLTDGTVFDSS 72

Query: 65  FERGVPFEFQLGAGKVIK-----------------------------------GGVTLVF 114
           FERG PFEF+LG+G+VIK                                   GG TL+F
Sbjct: 73  FERGDPFEFKLGSGQVIKGWDQGLLGACVGEKRKLKIPAKLGYGEQGSPPTIPGGATLIF 132

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BLAST of CmoCh08G002440 vs. Swiss-Prot
Match: FKB15_VICFA (FK506-binding protein 2 OS=Vicia faba GN=FKBP15 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 4.5e-23
Identity = 64/143 (44.76%), Postives = 77/143 (53.85%), Query Frame = 1


Query: 5   LIF--FLLACTSVYAMSDEDVTELQIDVTSRPSSCDIETRKGDKIKVHYRGMFTDGTVFD 64
           LIF  F++A   V A S  DVTELQI V  +P+SC+++  KGDK+KVHYRG  TDGTVFD
Sbjct: 8   LIFTIFIIASALVAAKSAADVTELQIGVKYKPASCEVQAHKGDKVKVHYRGKLTDGTVFD 67

Query: 65  SSFERGVPFEFQLGAGKVIK-----------------------------------GGVTL 111
           SSFER  P +F+LG G+VIK                                   GG TL
Sbjct: 68  SSFERNSPIDFELGGGQVIKGWDQGLLGMCLGEKRKLKIPAKLGYGEQGSPPTIPGGATL 127

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BLAST of CmoCh08G002440 vs. Swiss-Prot
Match: FKBP2_NEUCR (FK506-binding protein 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=fkr-5 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.9e-14
Identity = 52/127 (40.94%), Postives = 67/127 (52.76%), Query Frame = 1


Query: 9   LLACTSVYAMSDEDVTELQIDVTSRPSSCDIETRKGDKIKVHYRGMF-TDGTVFDSSFER 68
           LLA  +V  ++ E   EL IDVT  P  CD +TRKGDKI VHYRG   ++G  FD+S++R
Sbjct: 10  LLASATVGVLAAE---ELGIDVTV-PVECDRKTRKGDKINVHYRGTLQSNGQQFDASYDR 69

Query: 69  GVPFEFQLGAGKVIKG----------------------------------GVTLVFDTEL 101
           G PF F+LG G+VIKG                                  G TL+F+TEL
Sbjct: 70  GTPFSFKLGGGQVIKGWDEGLVDMCIGEKRTLTVPPSYGYGQRSIGPIPAGSTLIFETEL 129

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BLAST of CmoCh08G002440 vs. Swiss-Prot
Match: FKBP2_DICDI (FK506-binding protein 2 OS=Dictyostelium discoideum GN=fkbp2 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.9e-13
Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 1


Query: 25 ELQIDVTSRPSSCDIETRKGDKIKVHYRGMFTDGTVFDSSFERGVPFEFQLGAGKVIKG 84
          +LQI V  RP  C ++T+ GDK+K+HY G   +G  FDSS +RG PFEF++G G+VIKG
Sbjct: 26 KLQIGVKYRPDECTVKTKSGDKLKIHYTGTLLNGDKFDSSVDRGTPFEFKIGVGQVIKG 84

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BLAST of CmoCh08G002440 vs. TrEMBL
Match: A0A0A0K598_CUCSA (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_7G363070 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.0e-33
Identity = 82/150 (54.67%), Postives = 96/150 (64.00%), Query Frame = 1


Query: 1   MKASLIF-FLLACTSVYAMSDEDVTELQIDVTSRPSSCDIETRKGDKIKVHYRGMFTDGT 60
           MKASL+F FLL CT +YA + +DVTELQI VT RP+SCDI+  KGD+IKVHYRG  TDGT
Sbjct: 1   MKASLVFLFLLGCTLIYAKTTKDVTELQIGVTGRPASCDIQAHKGDRIKVHYRGKLTDGT 60

Query: 61  VFDSSFERGVPFEFQLGAGKVIK-----------------------------------GG 115
           VFDSSFERG P EF+LG+G+VIK                                   GG
Sbjct: 61  VFDSSFERGDPIEFELGSGQVIKGWDQGLLGMCVGEKRKLKIPAKLGYGPQGSPPTIPGG 120

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BLAST of CmoCh08G002440 vs. TrEMBL
Match: A0A103Y758_CYNCS (Peptidyl-prolyl cis-trans isomerase OS=Cynara cardunculus var. scolymus GN=Ccrd_017911 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 7.3e-28
Identity = 66/104 (63.46%), Postives = 76/104 (73.08%), Query Frame = 1


Query: 3   ASLIFFLLACTSVYAMSDEDVTELQIDVTSRPSSCDIETRKGDKIKVHYRGMFTDGTVFD 62
           AS I  LL   +V +    DVTELQI V  +P+SC I+  KGDKIKVHYRG  TDG VFD
Sbjct: 9   ASSISILLIAATVVSAYSRDVTELQISVQHKPTSCTIQAHKGDKIKVHYRGKLTDGKVFD 68

Query: 63  SSFERGVPFEFQLGAGKVIKGGVTLVFDTELVAINGK-PSSGGN 106
           SSFERG P EF LG+G+VIKGG TL+FDTEL+A+NGK P  G N
Sbjct: 69  SSFERGTPLEFVLGSGQVIKGGATLIFDTELIAVNGKRPGEGDN 112

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BLAST of CmoCh08G002440 vs. TrEMBL
Match: A0A067LA05_JATCU (Peptidyl-prolyl cis-trans isomerase OS=Jatropha curcas GN=JCGZ_15141 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.8e-27
Identity = 74/145 (51.03%), Postives = 86/145 (59.31%), Query Frame = 1


Query: 2   KASLIFFLLACTS-VYAMSDEDVTELQIDVTSRPSSCDIETRKGDKIKVHYRGMFTDGTV 61
           KA++IFF LA  + V A    DVTELQI V  +P SC+I+  KGD+IKVHYRG  TDGTV
Sbjct: 8   KAAIIFFFLALFALVSAKKSGDVTELQIGVKHKPKSCEIQAHKGDRIKVHYRGKLTDGTV 67

Query: 62  FDSSFERGVPFEFQLGAGKVIK-----------------------------------GGV 111
           FDSSFERG P EF+LG+G+VIK                                   GG 
Sbjct: 68  FDSSFERGDPIEFELGSGQVIKGWDQGLLGMCVGEKRKLKIPAKLGYGEQGSPPKIPGGA 127

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BLAST of CmoCh08G002440 vs. TrEMBL
Match: A0A0J8ER90_BETVU (Peptidyl-prolyl cis-trans isomerase OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g168190 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 4.7e-27
Identity = 71/146 (48.63%), Postives = 87/146 (59.59%), Query Frame = 1


Query: 4   SLIFFLLACTSVYAMSDEDVTELQIDVTSRPSSCDIETRKGDKIKVHYRGMFTDGTVFDS 63
           +++ FL+  T VYA   +DV ELQI V  +P+SC+I+  KGDKIKVHYRG  TDGTVFDS
Sbjct: 6   AILLFLVLITLVYAKKSDDVKELQIGVKYKPASCEIKAHKGDKIKVHYRGQLTDGTVFDS 65

Query: 64  SFERGVPFEFQLGAGKVIK-----------------------------------GGVTLV 114
           SFERG P EFQLG+G+VIK                                   GG TL+
Sbjct: 66  SFERGEPIEFQLGSGQVIKGWDQGLLGMCVGEKRKLKIPSKLGYGDQGSPPTIPGGATLI 125

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BLAST of CmoCh08G002440 vs. TrEMBL
Match: A0A0D3BD94_BRAOL (Peptidyl-prolyl cis-trans isomerase OS=Brassica oleracea var. oleracea GN=FKBP15-1 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.0e-26
Identity = 73/145 (50.34%), Postives = 84/145 (57.93%), Query Frame = 1


Query: 1   MKASLIFFLLAC-TSVYAMSDEDVTELQIDVTSRPSSCDIETRKGDKIKVHYRGMFTDGT 60
           MKA+ +  LLA  TSVYA    DVTELQI V  +P +CD +  KGDKIKVHYRG  TDGT
Sbjct: 9   MKAAGVLVLLAVLTSVYAKKSGDVTELQIGVKFKPKTCDAQAHKGDKIKVHYRGKLTDGT 68

Query: 61  VFDSSFERGVPFEFQLGAGKV-----------------------------------IKGG 110
           VFDSSFERG P EF+LG+G+V                                   I GG
Sbjct: 69  VFDSSFERGDPIEFELGSGQVIPGWDQGLLGACVGEKRKLKIPSKLGYGDNGSPPKIPGG 128

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BLAST of CmoCh08G002440 vs. TAIR10
Match: AT3G25220.1 (AT3G25220.1 FK506-binding protein 15 kD-1)

HSP 1 Score: 116.7 bits (291), Expect = 9.4e-27
Identity = 68/145 (46.90%), Postives = 77/145 (53.10%), Query Frame = 1


Query: 1   MKA-SLIFFLLACTSVYAMSDEDVTELQIDVTSRPSSCDIETRKGDKIKVHYRGMFTDGT 60
           MKA   +  L   T  YA    DVTELQI V  +P  CD++  KGDKIKVHYRG  TDGT
Sbjct: 8   MKAVGFLLLLTILTLAYAKKSGDVTELQIGVKYKPQKCDLQAHKGDKIKVHYRGKLTDGT 67

Query: 61  VFDSSFERGVPFEFQLGAGKV-----------------------------------IKGG 110
           VFDSSFERG P EF+LG G+V                                   I GG
Sbjct: 68  VFDSSFERGDPIEFELGTGQVIPGWDQGLLGACVGEKRKLKIPSKLGYGDNGSPPKIPGG 127

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BLAST of CmoCh08G002440 vs. TAIR10
Match: AT5G48580.1 (AT5G48580.1 FK506- and rapamycin-binding protein 15 kD-2)

HSP 1 Score: 114.8 bits (286), Expect = 3.6e-26
Identity = 64/144 (44.44%), Postives = 80/144 (55.56%), Query Frame = 1


Query: 5   LIFFLLACTSVYAMSDEDVTELQIDVTSRPSSCDIETRKGDKIKVHYRGMFTDGTVFDSS 64
           LIFF L     +A    DV+ELQI V  +P +C+++  KGD IKVHYRG  TDGTVFDSS
Sbjct: 13  LIFFSLISLQGFAKKTGDVSELQIGVKFKPKTCEVQAHKGDTIKVHYRGKLTDGTVFDSS 72

Query: 65  FERGVPFEFQLGAGKVIK-----------------------------------GGVTLVF 114
           FERG PFEF+LG+G+VIK                                   GG TL+F
Sbjct: 73  FERGDPFEFKLGSGQVIKGWDQGLLGACVGEKRKLKIPAKLGYGEQGSPPTIPGGATLIF 132

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BLAST of CmoCh08G002440 vs. TAIR10
Match: AT5G48570.1 (AT5G48570.1 FKBP-type peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 57.8 bits (138), Expect = 5.2e-09
Identity = 25/41 (60.98%), Postives = 30/41 (73.17%), Query Frame = 1


Query: 43  KGDKIKVHYRGMFTDGTVFDSSFERGVPFEFQLGAGKVIKG 84
            GD+++VHY G   DGT FDSS +RG PF+F LG G VIKG
Sbjct: 64  NGDEVEVHYTGTLLDGTKFDSSRDRGTPFKFTLGQGHVIKG 104

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BLAST of CmoCh08G002440 vs. TAIR10
Match: AT3G25230.2 (AT3G25230.2 rotamase FKBP 1)

HSP 1 Score: 56.2 bits (134), Expect = 1.5e-08
Identity = 24/41 (58.54%), Postives = 30/41 (73.17%), Query Frame = 1


Query: 43 KGDKIKVHYRGMFTDGTVFDSSFERGVPFEFQLGAGKVIKG 84
           GD+++VHY G   DGT FDSS +R  PF+F LG G+VIKG
Sbjct: 56 NGDEVEVHYTGTLLDGTKFDSSRDRATPFKFTLGQGQVIKG 96

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BLAST of CmoCh08G002440 vs. TAIR10
Match: AT5G45680.1 (AT5G45680.1 FK506-binding protein 13)

HSP 1 Score: 53.5 bits (127), Expect = 9.7e-08
Identity = 24/44 (54.55%), Postives = 29/44 (65.91%), Query Frame = 1


Query: 40  ETRKGDKIKVHYRGMFTDGTVFDSSFERGVPFEFQLGAGKVIKG 84
           E  KG  IK HY G   +G VFDSS+ RG P  F++G G+VIKG
Sbjct: 105 EAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKG 148

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BLAST of CmoCh08G002440 vs. NCBI nr
Match: gi|449463206|ref|XP_004149325.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP15-1 [Cucumis sativus])

HSP 1 Score: 149.8 bits (377), Expect = 2.8e-33
Identity = 82/150 (54.67%), Postives = 96/150 (64.00%), Query Frame = 1


Query: 1   MKASLIF-FLLACTSVYAMSDEDVTELQIDVTSRPSSCDIETRKGDKIKVHYRGMFTDGT 60
           MKASL+F FLL CT +YA + +DVTELQI VT RP+SCDI+  KGD+IKVHYRG  TDGT
Sbjct: 1   MKASLVFLFLLGCTLIYAKTTKDVTELQIGVTGRPASCDIQAHKGDRIKVHYRGKLTDGT 60

Query: 61  VFDSSFERGVPFEFQLGAGKVIK-----------------------------------GG 115
           VFDSSFERG P EF+LG+G+VIK                                   GG
Sbjct: 61  VFDSSFERGDPIEFELGSGQVIKGWDQGLLGMCVGEKRKLKIPAKLGYGPQGSPPTIPGG 120

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BLAST of CmoCh08G002440 vs. NCBI nr
Match: gi|659116449|ref|XP_008458077.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP15-1 [Cucumis melo])

HSP 1 Score: 149.4 bits (376), Expect = 3.7e-33
Identity = 82/150 (54.67%), Postives = 96/150 (64.00%), Query Frame = 1


Query: 1   MKASLIF-FLLACTSVYAMSDEDVTELQIDVTSRPSSCDIETRKGDKIKVHYRGMFTDGT 60
           MKASL+F FLL CT +YA + +DVTELQI VT RP+SCDI+  KGD+IKVHYRG  TDGT
Sbjct: 1   MKASLLFLFLLGCTLIYAKTTKDVTELQIGVTGRPASCDIQAHKGDRIKVHYRGKLTDGT 60

Query: 61  VFDSSFERGVPFEFQLGAGKVIK-----------------------------------GG 115
           VFDSSFERG P EF+LGAG+VIK                                   GG
Sbjct: 61  VFDSSFERGDPIEFELGAGQVIKGWDQGLLGMCVGEKRKLKIPAKLGYGPQGSPPTIPGG 120

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BLAST of CmoCh08G002440 vs. NCBI nr
Match: gi|976918604|gb|KVI03776.1| (Peptidyl-prolyl cis-trans isomerase, FKBP-type [Cynara cardunculus var. scolymus])

HSP 1 Score: 131.3 bits (329), Expect = 1.0e-27
Identity = 66/104 (63.46%), Postives = 76/104 (73.08%), Query Frame = 1


Query: 3   ASLIFFLLACTSVYAMSDEDVTELQIDVTSRPSSCDIETRKGDKIKVHYRGMFTDGTVFD 62
           AS I  LL   +V +    DVTELQI V  +P+SC I+  KGDKIKVHYRG  TDG VFD
Sbjct: 9   ASSISILLIAATVVSAYSRDVTELQISVQHKPTSCTIQAHKGDKIKVHYRGKLTDGKVFD 68

Query: 63  SSFERGVPFEFQLGAGKVIKGGVTLVFDTELVAINGK-PSSGGN 106
           SSFERG P EF LG+G+VIKGG TL+FDTEL+A+NGK P  G N
Sbjct: 69  SSFERGTPLEFVLGSGQVIKGGATLIFDTELIAVNGKRPGEGDN 112

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BLAST of CmoCh08G002440 vs. NCBI nr
Match: gi|802546504|ref|XP_012085211.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP15-1 [Jatropha curcas])

HSP 1 Score: 129.4 bits (324), Expect = 4.0e-27
Identity = 74/145 (51.03%), Postives = 86/145 (59.31%), Query Frame = 1


Query: 2   KASLIFFLLACTS-VYAMSDEDVTELQIDVTSRPSSCDIETRKGDKIKVHYRGMFTDGTV 61
           KA++IFF LA  + V A    DVTELQI V  +P SC+I+  KGD+IKVHYRG  TDGTV
Sbjct: 8   KAAIIFFFLALFALVSAKKSGDVTELQIGVKHKPKSCEIQAHKGDRIKVHYRGKLTDGTV 67

Query: 62  FDSSFERGVPFEFQLGAGKVIK-----------------------------------GGV 111
           FDSSFERG P EF+LG+G+VIK                                   GG 
Sbjct: 68  FDSSFERGDPIEFELGSGQVIKGWDQGLLGMCVGEKRKLKIPAKLGYGEQGSPPKIPGGA 127

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BLAST of CmoCh08G002440 vs. NCBI nr
Match: gi|731347670|ref|XP_010685106.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP15-1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 128.6 bits (322), Expect = 6.8e-27
Identity = 71/146 (48.63%), Postives = 87/146 (59.59%), Query Frame = 1


Query: 4   SLIFFLLACTSVYAMSDEDVTELQIDVTSRPSSCDIETRKGDKIKVHYRGMFTDGTVFDS 63
           +++ FL+  T VYA   +DV ELQI V  +P+SC+I+  KGDKIKVHYRG  TDGTVFDS
Sbjct: 6   AILLFLVLITLVYAKKSDDVKELQIGVKYKPASCEIKAHKGDKIKVHYRGQLTDGTVFDS 65

Query: 64  SFERGVPFEFQLGAGKVIK-----------------------------------GGVTLV 114
           SFERG P EFQLG+G+VIK                                   GG TL+
Sbjct: 66  SFERGEPIEFQLGSGQVIKGWDQGLLGMCVGEKRKLKIPSKLGYGDQGSPPTIPGGATLI 125

The following BLAST results are available for this feature:

BLAST of CmoCh08G002440 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FK151_ARATH	1.7e-25	46.90	Peptidyl-prolyl cis-trans isomerase FKBP15-1 OS=Arabidopsis thaliana GN=FKBP15-1...	[more]
FK152_ARATH	6.3e-25	44.44	Peptidyl-prolyl cis-trans isomerase FKBP15-2 OS=Arabidopsis thaliana GN=FKBP15-2...	[more]
FKB15_VICFA	4.5e-23	44.76	FK506-binding protein 2 OS=Vicia faba GN=FKBP15 PE=1 SV=1	[more]
FKBP2_NEUCR	2.9e-14	40.94	FK506-binding protein 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / C...	[more]
FKBP2_DICDI	1.9e-13	54.24	FK506-binding protein 2 OS=Dictyostelium discoideum GN=fkbp2 PE=3 SV=1	[more]

BLAST of CmoCh08G002440 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K598_CUCSA	2.0e-33	54.67	Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_7G363070 PE=4 SV=1	[more]
A0A103Y758_CYNCS	7.3e-28	63.46	Peptidyl-prolyl cis-trans isomerase OS=Cynara cardunculus var. scolymus GN=Ccrd_...	[more]
A0A067LA05_JATCU	2.8e-27	51.03	Peptidyl-prolyl cis-trans isomerase OS=Jatropha curcas GN=JCGZ_15141 PE=4 SV=1	[more]
A0A0J8ER90_BETVU	4.7e-27	48.63	Peptidyl-prolyl cis-trans isomerase OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g1...	[more]
A0A0D3BD94_BRAOL	4.0e-26	50.34	Peptidyl-prolyl cis-trans isomerase OS=Brassica oleracea var. oleracea GN=FKBP15...	[more]

BLAST of CmoCh08G002440 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G25220.1	9.4e-27	46.90	FK506-binding protein 15 kD-1	[more]
AT5G48580.1	3.6e-26	44.44	FK506- and rapamycin-binding protein 15 kD-2	[more]
AT5G48570.1	5.2e-09	60.98	FKBP-type peptidyl-prolyl cis-trans isomerase family protein	[more]
AT3G25230.2	1.5e-08	58.54	rotamase FKBP 1	[more]
AT5G45680.1	9.7e-08	54.55	FK506-binding protein 13	[more]

BLAST of CmoCh08G002440 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463206\|ref\|XP_004149325.1\|	2.8e-33	54.67	PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP15-1 [Cucumis sativus]	[more]
gi\|659116449\|ref\|XP_008458077.1\|	3.7e-33	54.67	PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP15-1 [Cucumis melo]	[more]
gi\|976918604\|gb\|KVI03776.1\|	1.0e-27	63.46	Peptidyl-prolyl cis-trans isomerase, FKBP-type [Cynara cardunculus var. scolymus...	[more]
gi\|802546504\|ref\|XP_012085211.1\|	4.0e-27	51.03	PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP15-1 [Jatropha curcas]	[more]
gi\|731347670\|ref\|XP_010685106.1\|	6.8e-27	48.63	PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP15-1 [Beta vulgaris subsp. vu...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001179	PPIase_FKBP_dom
IPR023566	PPIase_FKBP

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G002440.1	CmoCh08G002440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00254	FKBP_C	coord: 40..83 score: 1.2
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PROFILE	PS50059	FKBP_PPIASE	coord: 44..83 score: 13
IPR023566	Peptidyl-prolyl cis-trans isomerase, FKBP-type	PANTHER	PTHR10516	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 22..101 score: 9.9
None	No IPR available	GENE3D	G3DSA:3.10.50.40		coord: 21..83 score: 1.6
None	No IPR available	PANTHER	PTHR10516:SF293	SUBFAMILY NOT NAMED	coord: 22..101 score: 9.9
None	No IPR available	unknown	SSF54534	FKBP-like	coord: 26..97 score: 5.11

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh08G002440	CmaCh08G002470	Cucurbita maxima (Rimu)	cmacmoB913
CmoCh08G002440	Csa7G363070	Cucumber (Chinese Long) v2	cmocuB900
CmoCh08G002440	MELO3C021108	Melon (DHL92) v3.5.1	cmomeB810
CmoCh08G002440	CSPI07G14800	Wild cucumber (PI 183967)	cmocpiB913
CmoCh08G002440	Lsi02G021360	Bottle gourd (USVL1VR-Ls)	cmolsiB809
CmoCh08G002440	Cp4.1LG17g11430	Cucurbita pepo (Zucchini)	cmocpeB851
CmoCh08G002440	MELO3C021108.2	Melon (DHL92) v3.6.1	cmomedB913
CmoCh08G002440	Carg11473	Silver-seed gourd	carcmoB0022
CmoCh08G002440	Carg05068	Silver-seed gourd	carcmoB0119

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh08G002440	Cucurbita moschata (Rifu)	cmocmoB311
CmoCh08G002440	Watermelon (97103) v1	cmowmB843
CmoCh08G002440	Cucumber (Gy14) v1	cgycmoB1078
CmoCh08G002440	Cucurbita maxima (Rimu)	cmacmoB366
CmoCh08G002440	Watermelon (Charleston Gray)	cmowcgB785
CmoCh08G002440	Cucurbita pepo (Zucchini)	cmocpeB834
CmoCh08G002440	Cucumber (Gy14) v2	cgybcmoB955
CmoCh08G002440	Cucumber (Chinese Long) v3	cmocucB1066
CmoCh08G002440	Watermelon (97103) v2	cmowmbB916
CmoCh08G002440	Wax gourd	cmowgoB1128