CmoCh06G008240 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCCAAAGACTCTCCCTTTCTCTTTACCTCTCCACCATGGAAATCTCAGCCCTCTTCTTCATCATCTTCTTCCTCCTCTCACCCATCTCCATTAAAGCTCAAACAACAACAACTCATTGCAGCCATGGCAGCCCATCAATCCATCTCCCTTTCACCTTCAACCTTTCATGTTCATCAAACACAACAAGAATCCACTTCAAATCCTACGATTCTCTATCAATCAAATCCATTTCCTACGACCAAAAGCGGCTCGATCTTATAGACCTCAATGGTTGCGTTCACGGCGCGTTTCTCAAACTAAACCTCACCCTCACTCCATTTCGATACTTCTACGTCGTTCGAGATTACAAATACCTCAATTGCACGTCGAAATTGTCGTCGCCGTCGCCCCCGATACCGTGCTTGAGCCGACCTCGAGATTACTATGTATATGTGGTGAGGGAAATGGAAGAAACACCAAGGTTTTGCAAGGAAGTGAAGAAAGTGAAGATCCCATTTGAGTATAGCCCTTATCTTGATGATGGGTCTTTTGGACTCTCATTAAGTTGGGGAGCTAATGATGATGAAGGAAGAACAGAGTCTGAAAGAGGGTGTCTTTATAAAGCACCTAATTATGAAGGTAACATTCCATTCTTTCCTTCTTTAGGTCACTAACTAAAAAGAACAAAAAGGAAAAGAATCTTTTTTTTTTCTTTTCTTTTCTTTATGTTTAATTCAATTAACTTTTGATTTTTTTTTCATTAATTGCTTGTATTTTGGGTTCTTTTGCTTAATACTCTTTTAAAAAAATTTAAACTTTGGGTTATTTGCATTTTAGTCCTTTAAATTTTCGAAATTATTTTATTTTGGTTCGTAAATTTTTTAGTTTGTTTCGTGTAGGTTCATATTTTTCATTATATCTATTTTTTTCTAAAATATTAAAAAAATTAATCATTTTGAATTATTAAGTTATATTAAATGATAAAATAATAGAAAAAAAATAAATCAATTTTTTAAATTAAAGAGTTAAATTAAGAAACGACTTTTTATATATATATATATATATATATATATATATATATATATAGATTAAATGATAAAATAATAGAAAAATAAATAATCAATTTTTAAATTTAAAGAGTTAAATTAAAATAGATATTTTAAAATTAAGAAACCTCTTATATATATATATAGATATAGATATAGATATATTAAATGATAAAATAATAGAAAAAATAAATAATCAATTTTTTAAAATTAAAGAGTTAAATTAAAATAGATATTTTGAAATTAAGAAACGACTTTTATAAAAATTTGTAGACTTAAATAGACATTTTAAAATAATTCAAAGCTTTAAAAAAATTGTTTTTTTTTTCTTTTCTGTTAATGAATATAAGAATAATTTCTAATTAATTTATAAATTATTGTGAGGTCCTAAATAAAAATTATTTCTTAGAAACCCCTTTACTAAAATAAATTGACCAAGTAGTCCCCAGAGAATAATTTCAAATGACCCCTACAAATTTCTTTTTTTAAAATAAATACCCACTTTTTGTAAAAAAAAATAAAAACTGTGTTTGAATATTCAAAGTTGTTTAATGCAATATCATTAATTGGGTCAAAGGTTCATTGATTTTAACCTTTAAACTTCATTTTCTAGAATAATTATATATACATAAATAAATAAATATTTTTAGTCCATCATTTAAATGTTATTGAGTCACCAAATTAAAATAATAATAATAATACTTTATATCTACAAAGAATGTTTTGCTTCAATTTTAAATAAACTTAGGTTTATCCCAAGTTTATATAACCTGTTTTTAAAATAATTATAATATTATGAAAAAGGAAATTAAGTTTATTTTAATTTGTATTTGTATTTTTATTTTTGTGCAGTACTCGGTGTTATCTTACTTGCAGCTATGGTGGTAATATCATCGATGGTGATCATAAAGATTTGCCACTCAAAAAAACATAAAATTTTGAAGGAAGAAGTTCAGAAAAAGGTGTTTGAGCATCCGTATGAAGCACTAAAGCCTGGATCAGATGAAGTTTCCGTTTGAATTTTTGATCGAAAATATACACGAGTTGAACTGTGTTTAAATTAAATAAATACTAATTTTGTTTAATTTTAATTATGAAATTTTTTTAGCAAAGAGTGTTCCTTTGTTTAATTAATCTTTGATGATCATTTTATGTCTTTTTTTTTTTTTTTG TCCCAAAGACTCTCCCTTTCTCTTTACCTCTCCACCATGGAAATCTCAGCCCTCTTCTTCATCATCTTCTTCCTCCTCTCACCCATCTCCATTAAAGCTCAAACAACAACAACTCATTGCAGCCATGGCAGCCCATCAATCCATCTCCCTTTCACCTTCAACCTTTCATGTTCATCAAACACAACAAGAATCCACTTCAAATCCTACGATTCTCTATCAATCAAATCCATTTCCTACGACCAAAAGCGGCTCGATCTTATAGACCTCAATGGTTGCGTTCACGGCGCGTTTCTCAAACTAAACCTCACCCTCACTCCATTTCGATACTTCTACGTCGTTCGAGATTACAAATACCTCAATTGCACGTCGAAATTGTCGTCGCCGTCGCCCCCGATACCGTGCTTGAGCCGACCTCGAGATTACTATGTATATGTGGTGAGGGAAATGGAAGAAACACCAAGGTTTTGCAAGGAAGTGAAGAAAGTGAAGATCCCATTTGAGTATAGCCCTTATCTTGATGATGGGTCTTTTGGACTCTCATTAAGTTGGGGAGCTAATGATGATGAAGGAAGAACAGAGTCTGAAAGAGGGTGTCTTTATAAAGCACCTAATTATGAAGTACTCGGTGTTATCTTACTTGCAGCTATGGTGGTAATATCATCGATGGTGATCATAAAGATTTGCCACTCAAAAAAACATAAAATTTTGAAGGAAGAAGTTCAGAAAAAGGTGTTTGAGCATCCGTATGAAGCACTAAAGCCTGGATCAGATGAAGTTTCCGTTTGAATTTTTGATCGAAAATATACACGAGTTGAACTGTGTTTAAATTAAATAAATACTAATTTTGTTTAATTTTAATTATGAAATTTTTTTAGCAAAGAGTGTTCCTTTGTTTAATTAATCTTTGATGATCATTTTATGTCTTTTTTTTTTTTTTTG ATGGAAATCTCAGCCCTCTTCTTCATCATCTTCTTCCTCCTCTCACCCATCTCCATTAAAGCTCAAACAACAACAACTCATTGCAGCCATGGCAGCCCATCAATCCATCTCCCTTTCACCTTCAACCTTTCATGTTCATCAAACACAACAAGAATCCACTTCAAATCCTACGATTCTCTATCAATCAAATCCATTTCCTACGACCAAAAGCGGCTCGATCTTATAGACCTCAATGGTTGCGTTCACGGCGCGTTTCTCAAACTAAACCTCACCCTCACTCCATTTCGATACTTCTACGTCGTTCGAGATTACAAATACCTCAATTGCACGTCGAAATTGTCGTCGCCGTCGCCCCCGATACCGTGCTTGAGCCGACCTCGAGATTACTATGTATATGTGGTGAGGGAAATGGAAGAAACACCAAGGTTTTGCAAGGAAGTGAAGAAAGTGAAGATCCCATTTGAGTATAGCCCTTATCTTGATGATGGGTCTTTTGGACTCTCATTAAGTTGGGGAGCTAATGATGATGAAGGAAGAACAGAGTCTGAAAGAGGGTGTCTTTATAAAGCACCTAATTATGAAGTACTCGGTGTTATCTTACTTGCAGCTATGGTGGTAATATCATCGATGGTGATCATAAAGATTTGCCACTCAAAAAAACATAAAATTTTGAAGGAAGAAGTTCAGAAAAAGGTGTTTGAGCATCCGTATGAAGCACTAAAGCCTGGATCAGATGAAGTTTCCGTTTGA
BLAST of CmoCh06G008240 vs. TrEMBL
Match: A0A0A0L6T1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G019320 PE=4 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 1.1e-76 Identity = 161/257 (62.65%), Postives = 195/257 (75.88%), Query Frame = 1
BLAST of CmoCh06G008240 vs. TrEMBL
Match: A0A067L729_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03445 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 6.9e-39 Identity = 97/233 (41.63%), Postives = 136/233 (58.37%), Query Frame = 1
BLAST of CmoCh06G008240 vs. TrEMBL
Match: W9RPY6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024052 PE=4 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 3.8e-37 Identity = 104/254 (40.94%), Postives = 137/254 (53.94%), Query Frame = 1
BLAST of CmoCh06G008240 vs. TrEMBL
Match: M5WBS7_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa016300mg PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 2.1e-35 Identity = 80/181 (44.20%), Postives = 109/181 (60.22%), Query Frame = 1
BLAST of CmoCh06G008240 vs. TrEMBL
Match: V4VL52_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022153mg PE=4 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 4.6e-35 Identity = 82/185 (44.32%), Postives = 108/185 (58.38%), Query Frame = 1
BLAST of CmoCh06G008240 vs. NCBI nr
Match: gi|449459050|ref|XP_004147259.1| (PREDICTED: uncharacterized protein LOC101212248 [Cucumis sativus]) HSP 1 Score: 294.7 bits (753), Expect = 1.6e-76 Identity = 161/257 (62.65%), Postives = 195/257 (75.88%), Query Frame = 1
BLAST of CmoCh06G008240 vs. NCBI nr
Match: gi|657964366|ref|XP_008373804.1| (PREDICTED: uncharacterized protein LOC103437129 [Malus domestica]) HSP 1 Score: 182.6 bits (462), Expect = 8.6e-43 Identity = 105/252 (41.67%), Postives = 143/252 (56.75%), Query Frame = 1
BLAST of CmoCh06G008240 vs. NCBI nr
Match: gi|694313958|ref|XP_009369044.1| (PREDICTED: RING-H2 finger protein ATL22-like [Pyrus x bretschneideri]) HSP 1 Score: 178.3 bits (451), Expect = 1.6e-41 Identity = 102/252 (40.48%), Postives = 143/252 (56.75%), Query Frame = 1
BLAST of CmoCh06G008240 vs. NCBI nr
Match: gi|645266010|ref|XP_008238425.1| (PREDICTED: putative RING-H2 finger protein ATL21A [Prunus mume]) HSP 1 Score: 171.0 bits (432), Expect = 2.6e-39 Identity = 109/255 (42.75%), Postives = 143/255 (56.08%), Query Frame = 1
BLAST of CmoCh06G008240 vs. NCBI nr
Match: gi|802582383|ref|XP_012070050.1| (PREDICTED: putative RING-H2 finger protein ATL21A [Jatropha curcas]) HSP 1 Score: 169.1 bits (427), Expect = 9.9e-39 Identity = 97/233 (41.63%), Postives = 136/233 (58.37%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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