CmoCh05G011840 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAACCTTACTAGGCTCGCGAAATTAAACCTTGAAGGTTGCACAAACCTATCTCCCTTCCTAGTACAATTAATTTATTTGTTACGGAATATTAAGAGCCTGATGGGTGTTCTAGATTTGAAATGTTTCCCCATAAATGGGACTCATCAATCCATCCAATATGCGGAAACTTACTCAAAAACCCTAAATTTCCCTACTTCACTTTGGTAGATCTTCAATTTTGCAACATATCAAATGCAGATTTTTTGGAAACTTTATGTGATGTCAACCCTTTCATAAATAGGCTACTCTTGTGGGAAAACAAATTTTGTAGTCTACCCTCGTGTCTCCATAAGTTCATGTCTTTGGGAAATCTCCAATTGAGGAATTGCAAGTTTCTTCAACAAATTCCAAACCTTCCTCAGAGTATACAAAAAATGGATGCCACGGGATTTGGTTAAAAGTCCAGACAACATTTTGGATATAATATCAAGCAAGCAAGTTCATCTCTTCTCATTTCATTTCTCTTTGTTTATGTTGCATTTTTCTCTCTCATTAATATTTTCATGCATGTTAATTCTTATGTCACAGGACATTACACTCGTGACTTTCCTAGAGAGTTCATTCTAATGAACATTGAAATTCCAGAATGGTTCAGTTATCAGACTATATCAAATTCAATAAAAGTTAGCTTTCGACATGATCACAATTTAGAAAGAACTTTGGCTACCTATGCTAAGTTCAGAGTGGATGGAGATTCATATAAAGGGGAAGCCTTAATTTCATGTAACATATTCATCGGATACAGACTCCAAAATTCTTTTATGAGAAAGTTCTTACCATCAACATCAGAATATACATGGTTAGTAACAACTTCTCCAACATTTAGTAGCTCCTTACTGGCGAATGATTGGAATGATTTTATAGTTTGGTTTGAAGTTTTGAAACGTCACGAGGTTAATGTAACTATAAGAAGATGCGGTGTCCATCTCCTTGAGGTCCATGGGATATCCCAAATTGATGTTAAGGGGCCAGGGGTTATATATACAGATTTTGATGACATAGAAGAATTGCCAAGCCGGTGAGTGAGCTTACATCCTTGCCATCTTGATTGATTGGTTTCTTGTGTTGTTTGGAATAAACTATTCTCCTTTTCATATATATTATTTTCTTATGTAAGATGTTGATAATGGCACAGGGATGCTATCAAATCCTTTGCTCAAAACGTCTCCCGCTTATCATATTGCAGTGGAATGTTGCATGCAATGAACTTCCCAGTTGAAATTGATTCCAAAATACAACAGGTTCGGAACTTTCCCTTACATGTAACATTTTTGGGTATTACAATGATTCGTGGAATGGAAGGCCTGGCAGAGACTACACTCGGCAAAGCTATATGTGATAAATTTAAAAAAAAATCGTGACTACTGGAGATACGAAGGGAGGGCTTTAAATCATTCTAGTGGATTTCTTCAATTGAATAGCCGGAAATTAGCTTCTCCGTTCCACAATTTTACCCTTGGAGATAGTAAAAGAAGAATGCCATCCTCTCAAAATTATTTCAAAATTTTTGAACATAGGTATGAAAATCTAAATGGTTTTAGTGTATGGTCTTTTTGGCCGTTGATACACTACAGGAAATAATGGATACTTATAAGAGAAAAGTTGGAAAATGGCCGCGAGAATTTGAAAGGCATTATGACACTAAGATTTTAATGGTTTAGCTCGGGATCCTTCTACTCTTCGTATTTGGTTTGGTATTGATATTGTGCATGACTTTGCAAGTCATGATGATATGACTAAAAAACGTCTTTATCAGAATATTTTTGCTTTTCAATTTGGACAATTAGTAATAATTTTTTTGTGGAGTACTTTCGAAAATCTGTTTCATGTAGCAATTGACCCTTTATACATACAGGAGCTTTGCTCATGTACCTTAAGATCCTCAATTTGGTCAACTGGTCGTCGAAGCTTTTACTCGAGCAAGTGTTCTTGACCAAACTAAATATATGCGCTAAAGGACAGAGTTGTGTCGGTACAGACATGAGCGGGTGTTGTTTTATATCATCTACACTTACAAATCTTGAAAGAATCTATTGATTGTGATATTACTTCCTATTTTCACAGCCTAAGACCATCACAATGTTAGAAATCAGACGCTCTATAATGGTAAGATATTGTCCACTTAAGCATAAGCCTTCATGGCTTTATTTTTTGTTACTCTAGAAGGCCTCATACTAATAGAGATGTATTCCTTATAAACCCATGATCAACCCCTTAATTAGTCGATGTGAGACTCCTCTCCAAACGGTTCTCAACAATCTTCCCCTCGAACAAAATATACCATAGAGCCTCCGCTGAGGCCTATAAAGCCCTCGAACAGCCTCTTCTTAATTGAGGCTCAACTCCTTCTCTGGAGCTCTCAAACAAAGGACACTTGAGTCATTTTTGAATACACGTTTGAGGCTCACAACTTTTTTGTTCGACATTTTGAGAATTCTATTGACATGACTAAGTTAAGGCATGACTTTGATATCGGGTTAGAAACCACGACTCTCCACAATGATATGATATTGTCCATTTTGAGCATAAACTTTTTGTTACCCAAAACGCCTCACACCAATCAAAATGTGTTCCTTACTTTAAACTGGTGATCAATCTATTAGTTAATCAATAGGACTACTCTCCAAACAATCTTCTAACCCCTAGAATTTTAATGTCAGCCACCCGAAGAAATTAAGCCACTATCTTAGTGGAATACTAGCTTTTGACTGGGCCATTATCTCCATCAAATATTGGCTTTTGGCTAACTAAAGATGTCTTGTCTCTTATCGTTACTTTCTCACATATGGATTTAACAAATTTTAAAGACAAAAGTATAAGACAAATTGTATAATATTTTATTGATACTGGGATGGAAATGACGACATACCTTATTTTGTTTTATCTTCTTGAATTGATTTTTTAAAGACTTTGCTTGTTCTTTGTTGATGTTCTTAGCTCATCCATAACACCCTCTCTCCAATAGGAATTCATAAAAATTTGTTTATTAGAAGATGAATTATATACTTTTAAGACACGTATTAAAATGGATTTTTTATTTAACTACAGTTATTATAAATAA ATGGGAAACCTTACTAGGCTCGCGAAATTAAACCTTGAAGAGCCTGATGGGTGTTCTAGATTTGAAATGTTTCCCCATAAATGGGACTCATCAATCCATCCAATATGCGGAAACTTACTCAAAAACCCTAAATTTCCCTACTTCACTTTGGTAGATCTTCAATTTTGCAACATATCAAATGCAGATTTTTTGGAAACTTTATGTGATGTCAACCCTTTCATAAATAGGCTACTCTTGTGGGAAAACAAATTTTGTAGTCTACCCTCGTGTCTCCATAAGTTCATGTCTTTGGGAAATCTCCAATTGAGGAATTGCAAGTTTCTTCAACAAATTCCAAACCTTCCTCAGAGTATACAAAAAATGGATGCCACGGGATTTGGACATTACACTCGTGACTTTCCTAGAGAGTTCATTCTAATGAACATTGAAATTCCAGAATGGTTCAGTTATCAGACTATATCAAATTCAATAAAAGTTAGCTTTCGACATGATCACAATTTAGAAAGAACTTTGGCTACCTATGCTAAGTTCAGAGTGGATGGAGATTCATATAAAGGGGAAGCCTTAATTTCATGTAACATATTCATCGGATACAGACTCCAAAATTCTTTTATGAGAAAGTTCTTACCATCAACATCAGAATATACATGGTTAGTAACAACTTCTCCAACATTTAGTAGCTCCTTACTGGCGAATGATTGGAATGATTTTATAGTTTGGTTTGAAGTTTTGAAACGTCACGAGGTTAATGTAACTATAAGAAGATGCGGTGTCCATCTCCTTGAGGTCCATGGGATATCCCAAATTGATGTTAAGGGGCCAGGGGTTATATATACAGATTTTGATGACATAGAAGAATTGCCAAGCCGGGATGCTATCAAATCCTTTGCTCAAAACGTCTCCCGCTTATCATATTGCAGTGGAATGTTGCATGCAATGAACTTCCCAGTTGAAATTGATTCCAAAATACAACAGGTTCGGAACTTTCCCTTACATGTAACATTTTTGGGTATTACAATGATTCGTGGAATGGAAGGCCTGGCAGAGACTACACTCGGCAAAGCTATATGTGATAAATTTAAAAAAAAATCCCGGAAATTAGCTTCTCCGTTCCACAATTTTACCCTTGGAGATAGTAAAAGAAGAATGCCATCCTCTCAAAATTATTTCAAAATTTTTGAACATAGGTATGAAAATCTAAATGGAGCTTTGCTCATGTACCTTAAGATCCTCAATTTGGTCAACTGGTCGTCGAAGCTTTTACTCGAGCAAGTGTTCTTGACCAAACTAAATATATGCGCTAAAGGACAGAGTTGTGTCGGTACAGACATGAGCGGTTATTATAAATAA ATGGGAAACCTTACTAGGCTCGCGAAATTAAACCTTGAAGAGCCTGATGGGTGTTCTAGATTTGAAATGTTTCCCCATAAATGGGACTCATCAATCCATCCAATATGCGGAAACTTACTCAAAAACCCTAAATTTCCCTACTTCACTTTGGTAGATCTTCAATTTTGCAACATATCAAATGCAGATTTTTTGGAAACTTTATGTGATGTCAACCCTTTCATAAATAGGCTACTCTTGTGGGAAAACAAATTTTGTAGTCTACCCTCGTGTCTCCATAAGTTCATGTCTTTGGGAAATCTCCAATTGAGGAATTGCAAGTTTCTTCAACAAATTCCAAACCTTCCTCAGAGTATACAAAAAATGGATGCCACGGGATTTGGACATTACACTCGTGACTTTCCTAGAGAGTTCATTCTAATGAACATTGAAATTCCAGAATGGTTCAGTTATCAGACTATATCAAATTCAATAAAAGTTAGCTTTCGACATGATCACAATTTAGAAAGAACTTTGGCTACCTATGCTAAGTTCAGAGTGGATGGAGATTCATATAAAGGGGAAGCCTTAATTTCATGTAACATATTCATCGGATACAGACTCCAAAATTCTTTTATGAGAAAGTTCTTACCATCAACATCAGAATATACATGGTTAGTAACAACTTCTCCAACATTTAGTAGCTCCTTACTGGCGAATGATTGGAATGATTTTATAGTTTGGTTTGAAGTTTTGAAACGTCACGAGGTTAATGTAACTATAAGAAGATGCGGTGTCCATCTCCTTGAGGTCCATGGGATATCCCAAATTGATGTTAAGGGGCCAGGGGTTATATATACAGATTTTGATGACATAGAAGAATTGCCAAGCCGGGATGCTATCAAATCCTTTGCTCAAAACGTCTCCCGCTTATCATATTGCAGTGGAATGTTGCATGCAATGAACTTCCCAGTTGAAATTGATTCCAAAATACAACAGGTTCGGAACTTTCCCTTACATGTAACATTTTTGGGTATTACAATGATTCGTGGAATGGAAGGCCTGGCAGAGACTACACTCGGCAAAGCTATATGTGATAAATTTAAAAAAAAATCCCGGAAATTAGCTTCTCCGTTCCACAATTTTACCCTTGGAGATAGTAAAAGAAGAATGCCATCCTCTCAAAATTATTTCAAAATTTTTGAACATAGGTATGAAAATCTAAATGGAGCTTTGCTCATGTACCTTAAGATCCTCAATTTGGTCAACTGGTCGTCGAAGCTTTTACTCGAGCAAGTGTTCTTGACCAAACTAAATATATGCGCTAAAGGACAGAGTTGTGTCGGTACAGACATGAGCGGTTATTATAAATAA
BLAST of CmoCh05G011840 vs. TrEMBL
Match: A0A0A0LLK3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G020890 PE=4 SV=1) HSP 1 Score: 461.8 bits (1187), Expect = 9.2e-127 Identity = 251/440 (57.05%), Postives = 296/440 (67.27%), Query Frame = 1
BLAST of CmoCh05G011840 vs. TrEMBL
Match: A0A0A0LJM0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G022270 PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 1.5e-92 Identity = 195/385 (50.65%), Postives = 238/385 (61.82%), Query Frame = 1
BLAST of CmoCh05G011840 vs. TrEMBL
Match: E5GB33_CUCME (TIR-NBS-LRR disease resistance protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 2.8e-83 Identity = 181/358 (50.56%), Postives = 217/358 (60.61%), Query Frame = 1
BLAST of CmoCh05G011840 vs. TrEMBL
Match: D9I8I4_CUCSA (TIR-NBS-LRR-AAA+ATPase class resistance protein OS=Cucumis sativus PE=4 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 1.4e-77 Identity = 162/308 (52.60%), Postives = 194/308 (62.99%), Query Frame = 1
BLAST of CmoCh05G011840 vs. TrEMBL
Match: A0A0A0LLL0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G020940 PE=4 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 5.7e-76 Identity = 164/317 (51.74%), Postives = 202/317 (63.72%), Query Frame = 1
BLAST of CmoCh05G011840 vs. NCBI nr
Match: gi|778666709|ref|XP_011648797.1| (PREDICTED: TMV resistance protein N-like [Cucumis sativus]) HSP 1 Score: 461.8 bits (1187), Expect = 1.3e-126 Identity = 251/440 (57.05%), Postives = 296/440 (67.27%), Query Frame = 1
BLAST of CmoCh05G011840 vs. NCBI nr
Match: gi|700205747|gb|KGN60866.1| (hypothetical protein Csa_2G020890 [Cucumis sativus]) HSP 1 Score: 461.8 bits (1187), Expect = 1.3e-126 Identity = 251/440 (57.05%), Postives = 296/440 (67.27%), Query Frame = 1
BLAST of CmoCh05G011840 vs. NCBI nr
Match: gi|659070453|ref|XP_008455171.1| (PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like [Cucumis melo]) HSP 1 Score: 457.6 bits (1176), Expect = 2.5e-125 Identity = 249/441 (56.46%), Postives = 299/441 (67.80%), Query Frame = 1
BLAST of CmoCh05G011840 vs. NCBI nr
Match: gi|778666836|ref|XP_011648823.1| (PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like [Cucumis sativus]) HSP 1 Score: 348.2 bits (892), Expect = 2.1e-92 Identity = 195/385 (50.65%), Postives = 238/385 (61.82%), Query Frame = 1
BLAST of CmoCh05G011840 vs. NCBI nr
Match: gi|700205788|gb|KGN60907.1| (hypothetical protein Csa_2G022270 [Cucumis sativus]) HSP 1 Score: 348.2 bits (892), Expect = 2.1e-92 Identity = 195/385 (50.65%), Postives = 238/385 (61.82%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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