CmoCh05G003380 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAACATTTGCGCGCCACGTTTCTCACTCTCCTATGCCCTCATTTGCTCTGCTAGAAAAGTTTACAACCTAAACTCCTAGCTTTGTTGATCGTGGTTCGTCGCCCAAGCTTTGAGATCGAGAGAATTATTTCGTTGGTTGAAGTAGGGGAGAAGGAATTGCCGGTAGTTAATCGGAAATGAGGTCGATCGTTTCGCGGCTGATCCATTCGAGATCATCGGTTCCCAAGTTATAGTGAGTTCCTTCTGTCTTATGACACTTAATTTTGTTTTAGAATGGTGGATTGTTTTTCTTTTCTGGTGTATTAGAAATGTATATTGAATTCAGTTTCTGCTATGCTTTCAGTTCTTCTATGGTTTATTTTGTTCCTTACTGTCGATTAACCATCGGATATATACGGAATTCGCCACCAAAAGGGTGTTGGAGGGGGCGGGGGTGGCCATACTGTTGTGTAGGTCGAATTTCATTTGAATTTGGTGCTCGAATTTCATTTCGAGCTTTTAGATTTGTTAGTGAATCGGGTTTTTTTCAGAATTGTTCATTATTGTAGGAATCCGAACTGGAATGACTTCCTCGAGAGTTGTAAACTTTGATTATCTTGACTGTAGAATTGTTCGGTCTGTTGGTAGACAGACATGATCTCAGTGGGGATAAATTGAGAACAATGTGATTGGCGTTTGCCCCAATATTTTATTTAATTTTTCTAATCCTGACGTCAAGAATAATTTATGACTCAATTGCAGCTCTTTTTACTAAATGTGATTAACGGCAATCATTTTGTTGTTTCTTAACTATATTGTACAGCACAGTGACTGCTTTTCAGAGCGGGAGGCCATTTTCAACAGACTCTAACAAGGTCGACGAACCGTTCAAGGTCGAGGAAGCTGAAACAGTTAATGTTCCCCCACCTCCAACTGAGAAGGTATATGAAAAGAAGGACAAGGGTTGCTTGTGATTTCTGTAATTCTGTCTGTATCTTTGAGTTTGATCAATGCTATCTCCGTGGCATGTGCAATTGATCAGTTGCTGGTGCTGGGTGGAAATGGATTTGTGGGTTCTCATATTTGTCAAGAAGCCTTAAATCGTGGTCTTACAGTTGCTAGCCTTAGCAGGTATGTTTCAATATAAGAGCATATGCATCTTTGGCTTTTATGTCGCCTAGATTGTTTTACGTAAGATCTACACTTTTGAATGATCATATAAATCTATATTTGTTTCCTTCATATTGAGGAACTGATTGTAATAGGTACACTTTAGTTTTCAATACATGTTGAATATGGAAAGTACAAAAGAATCAGCTCAAAACCTTAAGAACTCTTTATTGGAAACTGGATCGCTATATGCTGCCTTTCAAATCACTATTTTCTTAATGAAAATGTATCGGCGAAATCAGGCCAGAACGATCGCTATTATAGATAATACGATTTGTTTTCCATCTTGTTGTTTAATGAATGGGAACTTCAATGTCTTTGTTCAGTTTCCTAGTGTTGGAAACTTTATTCTGACATCACAATAATGGCGCTTTGTTATTATTATCAGGTCTGGTAGATCATCAATACGTGATTCTTGGGCTAACAATGTAATTTGGCATCAAGGTTTGATTCCATTCCAGATGTTTTCAACTGTCAAATTTGTGTGCTGGCTTAGTGAAAATGCCTAAACTATTTTTCCCATTGCCAGGAAACCTTCTTTCACCCGATTCACTGAATGAAGCTTTTGACGGTGTTACCGCTGTTGTATGTAGTCCTCAACTTATTCTAAATTGTAAATTAGTTACAACTTTATTGTGTATACATTAATCCACTGATATATGGAATGGTTTGAGTTCTATGTGCACACTTCCCGATTAACTGTCAGGATACTGTTGGTAGACTCCTAGCAGCTATTATTCTCAGTTGTGATCAGGAACGAACTTATTTATGCGCACAACTAAATAAGTACTAAGTAGCATTTAGAAAAGGGAGGATTCTCTACTTGTATATAGCATTTCTTATTCCTGCAAATTATTTCTCTACTTGTGCCGGGGATTGCTAGTTTTGGTAAATTTTAGTTTTTTATTTCTAGGTCTCTTGTATTGGTGGTTTTGGCTCCAATTCTCAGATGTACAAGATCAATGGGACGGCAAATATCAATGCAATCAGAGTTGCTGCAGATAAAGGTGCAGTTTTTATGTGGTAATAAATTTATGAAAATGAACTGAAATTATGCAGTCTAGACCCTTCTGTTTCCTGTCAAAACTTAAATCTTCTAATGCTTTGATAGCATCTCACCTCACGTCAATAACCACACTTCCTATGCCCAATAATTTCCTATATTTCACGGGTCTCCGTTGATATGCATTGCATGTTTCATTATTTTTCTTGTAATGCTGATATCTCTGTACTTCCAATTCTAATGCAGAATTATCTGATGCTCGAGTGTTTCTTTTCTTTCTTGTGCCTTAGTTTTTTTTTTCCCCCCGTTTTTCGATAAGAAATGATACTGCAGTAAAGCAAAAGAAAGGTACAACCTTGGGGCCGTGGGTAGAGAGAACCCCCTCCCAACAAAAAAACTATAAGAAATCCCAACTAGATGTTTTGGTCTCCATCTCACTAGTCTAATTTTTGGCTTATCAATTATTCTTAACTTCAACATTTTGTCAAATGATTGTAGTTAGTTTAATATTTGCTGTACTTCTTGACTCTTACCAAGGCAGTACCAATCGCTTACAGGTGTAAAGAGATATGTCTATATCTCTGCTGCTGATTTTGGCTTGGTCAATTACTTGCTACAGGGATATTATGAGGGAAAGGTAGAATTTCTATTCCTTTTATTCCAAGAGTTGGTAATTAATCAAGATCTTGGACACTTATATATCATGTAGCCTGTTAATGCCTTTCTTGATCAATTCAAACTATGGTCGTGGGGTTTTTAAGGAAAATTGAACACTGATAGAGGAAATGACTCATTTAACTTCCACCAGAAATCTGGGTCACCAATCTTTCCATTTTGTGCAGATGGAAGTTCTATATTACATTGTTTTCTTATGAAAATCCTTTTCACAATTCATGTAATTTGGATTGATGTGGCTCATGCAAAATCTGTGTTTCCGTTTGTGTAGCGAGCGGCTGAGACAGAACTCCTCACTAAATTTCCTTATGGAGGTTAGATCTCTGATCTGTCAATGTTACTTTCAAACTCTTTAACTTGCACTTTTGCTCGTGCAGTTCAGATATATTGCCTGTAGTACGTAAGATGAATCTATACTCCCAATACTCTTTCATTTAGCTGCTAACAAGCGGTCTTGTTTATTGGCTTTCGTTAACATGTTTTTCTTTTCTAAATTATCCTGTCTTTTACAGTTAACAGTTTATGTGGAGAATAAAATGTTCTTTAATATACGTTTCAGGAGTGATTTTGAGGCCGGGATTTATTTACGGGACCCGTAACGTCGGGAGCATGAAGTTACCTCTGGGAGTGATTGGCTCTCCTTTGGAAATGGTAACTTGTGGTTTCTTCATTTGTTTTCTCGTTTAGGCTTTCCATTATGCCATGGACTTCGGTTTCTCATCGCCATTATTAGTTTAACGCTTGGCTTGATAACTGTTTGGTTTTTGGTTTTTGGTTTCTGGACAAGTAAAATGGATCTGATCATGTGATATTCAAATCTCTTAATCCTAATCCAAACATTTCCCTGCAGGTTCTTCAACACGCCAAACCACTACACCAGCTACCACTCGTTGGTCCTCTATTAACTCCTCCAGTAAGCGTGACTTCGGTGGCAAGGGTTTCTGTTCGGGCAGCAACGGACCCCGTCTTTCCTCCTGGAATCATCGACGTCTATGGCATACAACGGTACAGTCAACAGAAGTCGAAGTAGATTCGATAAGGCATGCACATTTTCTCTCCCTATCACACACTATATA CAACATTTGCGCGCCACGTTTCTCACTCTCCTATGCCCTCATTTGCTCTGCTAGAAAAGTTTACAACCTAAACTCCTAGCTTTGTTGATCGTGGTTCGTCGCCCAAGCTTTGAGATCGAGAGAATTATTTCGTTGGTTGAAGTAGGGGAGAAGGAATTGCCGGTAGTTAATCGGAAATGAGGTCGATCGTTTCGCGGCTGATCCATTCGAGATCATCGGTTCCCAAGTTATACACAGTGACTGCTTTTCAGAGCGGGAGGCCATTTTCAACAGACTCTAACAAGGTCGACGAACCGTTCAAGGTCGAGGAAGCTGAAACAGTTAATGTTCCCCCACCTCCAACTGAGAAGTTGCTGGTGCTGGGTGGAAATGGATTTGTGGGTTCTCATATTTGTCAAGAAGCCTTAAATCGTGGTCTTACAGTTGCTAGCCTTAGCAGGTCTGGTAGATCATCAATACGTGATTCTTGGGCTAACAATGTAATTTGGCATCAAGGAAACCTTCTTTCACCCGATTCACTGAATGAAGCTTTTGACGGTGTTACCGCTGTTGTCTCTTGTATTGGTGGTTTTGGCTCCAATTCTCAGATGTACAAGATCAATGGGACGGCAAATATCAATGCAATCAGAGTTGCTGCAGATAAAGGTGTAAAGAGATATGTCTATATCTCTGCTGCTGATTTTGGCTTGGTCAATTACTTGCTACAGGGATATTATGAGGGAAAGCGAGCGGCTGAGACAGAACTCCTCACTAAATTTCCTTATGGAGGAGTGATTTTGAGGCCGGGATTTATTTACGGGACCCGTAACGTCGGGAGCATGAAGTTACCTCTGGGAGTGATTGGCTCTCCTTTGGAAATGGTTCTTCAACACGCCAAACCACTACACCAGCTACCACTCGTTGGTCCTCTATTAACTCCTCCAGTAAGCGTGACTTCGGTGGCAAGGGTTTCTGTTCGGGCAGCAACGGACCCCGTCTTTCCTCCTGGAATCATCGACGTCTATGGCATACAACGGTACAGTCAACAGAAGTCGAAGTAGATTCGATAAGGCATGCACATTTTCTCTCCCTATCACACACTATATA ATGAGGTCGATCGTTTCGCGGCTGATCCATTCGAGATCATCGGTTCCCAAGTTATACACAGTGACTGCTTTTCAGAGCGGGAGGCCATTTTCAACAGACTCTAACAAGGTCGACGAACCGTTCAAGGTCGAGGAAGCTGAAACAGTTAATGTTCCCCCACCTCCAACTGAGAAGTTGCTGGTGCTGGGTGGAAATGGATTTGTGGGTTCTCATATTTGTCAAGAAGCCTTAAATCGTGGTCTTACAGTTGCTAGCCTTAGCAGGTCTGGTAGATCATCAATACGTGATTCTTGGGCTAACAATGTAATTTGGCATCAAGGAAACCTTCTTTCACCCGATTCACTGAATGAAGCTTTTGACGGTGTTACCGCTGTTGTCTCTTGTATTGGTGGTTTTGGCTCCAATTCTCAGATGTACAAGATCAATGGGACGGCAAATATCAATGCAATCAGAGTTGCTGCAGATAAAGGTGTAAAGAGATATGTCTATATCTCTGCTGCTGATTTTGGCTTGGTCAATTACTTGCTACAGGGATATTATGAGGGAAAGCGAGCGGCTGAGACAGAACTCCTCACTAAATTTCCTTATGGAGGAGTGATTTTGAGGCCGGGATTTATTTACGGGACCCGTAACGTCGGGAGCATGAAGTTACCTCTGGGAGTGATTGGCTCTCCTTTGGAAATGGTTCTTCAACACGCCAAACCACTACACCAGCTACCACTCGTTGGTCCTCTATTAACTCCTCCAGTAAGCGTGACTTCGGTGGCAAGGGTTTCTGTTCGGGCAGCAACGGACCCCGTCTTTCCTCCTGGAATCATCGACGTCTATGGCATACAACGGTACAGTCAACAGAAGTCGAAGTAG
BLAST of CmoCh05G003380 vs. Swiss-Prot
Match: Y1222_ARATH (Uncharacterized protein At1g32220, chloroplastic OS=Arabidopsis thaliana GN=At1g32220 PE=2 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 1.6e-48 Identity = 100/218 (45.87%), Postives = 141/218 (64.68%), Query Frame = 1
BLAST of CmoCh05G003380 vs. Swiss-Prot
Match: COQ11_YEAST (MIOREX complex component 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=COQ11 PE=1 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 6.5e-10 Identity = 33/78 (42.31%), Postives = 45/78 (57.69%), Query Frame = 1
BLAST of CmoCh05G003380 vs. Swiss-Prot
Match: YQJ9_SCHPO (Uncharacterized protein C1840.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1840.09 PE=3 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 4.2e-09 Identity = 71/281 (25.27%), Postives = 109/281 (38.79%), Query Frame = 1
BLAST of CmoCh05G003380 vs. Swiss-Prot
Match: FMP52_NEUCR (Protein fmp-52, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=fmp-52 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 8.8e-07 Identity = 47/163 (28.83%), Postives = 71/163 (43.56%), Query Frame = 1
BLAST of CmoCh05G003380 vs. TrEMBL
Match: A0A0A0LML0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383350 PE=4 SV=1) HSP 1 Score: 541.6 bits (1394), Expect = 5.9e-151 Identity = 267/287 (93.03%), Postives = 278/287 (96.86%), Query Frame = 1
BLAST of CmoCh05G003380 vs. TrEMBL
Match: V4WAT3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009111mg PE=4 SV=1) HSP 1 Score: 485.0 bits (1247), Expect = 6.5e-134 Identity = 239/284 (84.15%), Postives = 263/284 (92.61%), Query Frame = 1
BLAST of CmoCh05G003380 vs. TrEMBL
Match: A0A067FIX1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023205mg PE=4 SV=1) HSP 1 Score: 485.0 bits (1247), Expect = 6.5e-134 Identity = 239/284 (84.15%), Postives = 263/284 (92.61%), Query Frame = 1
BLAST of CmoCh05G003380 vs. TrEMBL
Match: B9HB95_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s28380g PE=4 SV=1) HSP 1 Score: 481.5 bits (1238), Expect = 7.2e-133 Identity = 235/285 (82.46%), Postives = 262/285 (91.93%), Query Frame = 1
BLAST of CmoCh05G003380 vs. TrEMBL
Match: A0A061GIN1_THECC (NAD(P)-binding Rossmann-fold superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_036856 PE=4 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 5.2e-131 Identity = 230/287 (80.14%), Postives = 261/287 (90.94%), Query Frame = 1
BLAST of CmoCh05G003380 vs. TAIR10
Match: AT5G10730.1 (AT5G10730.1 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 462.6 bits (1189), Expect = 1.8e-130 Identity = 224/287 (78.05%), Postives = 262/287 (91.29%), Query Frame = 1
BLAST of CmoCh05G003380 vs. TAIR10
Match: AT5G15910.1 (AT5G15910.1 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 308.9 bits (790), Expect = 3.2e-84 Identity = 146/225 (64.89%), Postives = 190/225 (84.44%), Query Frame = 1
BLAST of CmoCh05G003380 vs. TAIR10
Match: AT1G32220.1 (AT1G32220.1 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 194.5 bits (493), Expect = 8.9e-50 Identity = 100/218 (45.87%), Postives = 141/218 (64.68%), Query Frame = 1
BLAST of CmoCh05G003380 vs. NCBI nr
Match: gi|659089033|ref|XP_008445292.1| (PREDICTED: uncharacterized protein At1g32220, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 545.0 bits (1403), Expect = 7.6e-152 Identity = 269/287 (93.73%), Postives = 279/287 (97.21%), Query Frame = 1
BLAST of CmoCh05G003380 vs. NCBI nr
Match: gi|449441836|ref|XP_004138688.1| (PREDICTED: uncharacterized protein At1g32220, chloroplastic [Cucumis sativus]) HSP 1 Score: 541.6 bits (1394), Expect = 8.4e-151 Identity = 267/287 (93.03%), Postives = 278/287 (96.86%), Query Frame = 1
BLAST of CmoCh05G003380 vs. NCBI nr
Match: gi|659089031|ref|XP_008445291.1| (PREDICTED: uncharacterized protein At1g32220, chloroplastic isoform X1 [Cucumis melo]) HSP 1 Score: 526.2 bits (1354), Expect = 3.7e-146 Identity = 267/318 (83.96%), Postives = 279/318 (87.74%), Query Frame = 1
BLAST of CmoCh05G003380 vs. NCBI nr
Match: gi|720005957|ref|XP_010257827.1| (PREDICTED: uncharacterized protein At1g32220, chloroplastic [Nelumbo nucifera]) HSP 1 Score: 488.4 bits (1256), Expect = 8.5e-135 Identity = 235/285 (82.46%), Postives = 268/285 (94.04%), Query Frame = 1
BLAST of CmoCh05G003380 vs. NCBI nr
Match: gi|567916436|ref|XP_006450224.1| (hypothetical protein CICLE_v10009111mg [Citrus clementina]) HSP 1 Score: 485.0 bits (1247), Expect = 9.4e-134 Identity = 239/284 (84.15%), Postives = 263/284 (92.61%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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