CmoCh04G010080 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGTGTGGACAATAATAATATTAAAATAAAATAGGAAAATTCCAACGCCACTATCATTTCCATAAACTTTACCCAATCACCATCCAACTTAATGGGAATCATTCTCATACCCTTTTATGCAAGCTAAGCTAATTTATTTGTCTTTTCGGAAGTGCTTAGCTTGCATGGGCTGTCTTCTCCTCCCATTAATTCTCTTTTAAATTACATATTTGCTTAATTTGCTCCCATTATTCGGATGGAAGCGACTACGAAGCTCAAATCTTCCTCGAAAAAAAATCAATTTATACGTCAAGATATATATAATAATATATATATATTATTATTATTATTATTATTATTATTATTATTAGAGAGAGAAAAATCAATTTCTTGATATTTTACAAACGCAAGAAAGTCTTAAAAATTGAAAATAATATTACATATATAAATATATAAGGAAAATGATTTTGGAGAGACATGAAGGCCCATTAAAACCTGAAAAGCCCATAAGGAAATATCATCAACATAGTGACGGAGGCGACGAATCTCTCGTTCCGACGACTACCCGCCACCACTTCTTTCTCATATTCCTCAAATCCCATTTCAGATTCTCCATTTTTTGTTCATACATTTTTGGCTCCAACTGCGACACACTTCTCTTAACGCTGGCCTCTCTCTTCTCTCTTTCACTTTACTGCTTTCAATTCGACGAAAATTCACGCTGGAAACATCGCCCTTCCTGCTCAATCACCATCAACGCGATATGGTATCCCCTGAAACCACCAATTGGCTCTTTGATTATGCGTTAATCGATGATATTCCTGTTCCTGATGATGTCAATTTCTCTGCACCTACTGCCGGTTTCTCTTGGTCCATGCAACCCTTCAACGCCTCCTCTGATGTCAGGTTTTATTTCTCTCTCATTTTCTTCGATTTTCCTGTTCTATCCGTTTGACAATCATATATTGTTATGTATGTGAAAGTTCCTTCGAGTCTGCATGTACGGACTTCTAGTTGTGATCTAGGATTCGACTGTGCTGGGATTTGAGATGGTCGTTTGATTTCATCTTTAGCTCGAAAGTAGTGCTGCAACTTTTTCTTTATAAAAGAACTTGATTGGGACTTGAAACTTGATCTTGCTTCTTCGAATTTGATAATCAGAAGATTTGTGTCTACATCTCCAACTTTCCTTTACTATCTAAATTTAGTAACTAATTTACCATGTAAGGAGAAACAGGATCACATGTTTGAGAATATCTGAGATTTCTATCTAGTTTCTTCATGTTCTTGGCTTTTTAGTCGAAGCTTGTAGGTTGTAAATTTAAATGGGTAGGTTTAAAATCTGCAGTATAAACTTATTCATTTCATCCAATAAAAAATTTCCCCCTTCAAGTGTTGTTCCAATCCATTCTCCCCCTTTAACTAGGGGAGTAGTCGGCACCCTTAAATTAATCATTTACTGAAGCTTAAATAACAAATAATAACCTGAAAATATGATCATATTAAATAATCGCCTTAAAATATAATTAGTTCAGTTAAAAGAAACTGTGTGTGATCTTCATTTTAATCTTTTGAAATGTAGTTTTCTCTTAGTCTGTACTCTTTTCATGTTAGACATTCAGTTCTTTATTAATTTCTTTCACTTTGGATTCGACAAAAGATAATTTGATCAAAGTAAAGCGTCCGTCTTATTTAACCAGCCCAAGCATGAACTTGTAATTTACATGTCTTTCAAGACTTCATTTCCTCAGGTTTATTTCTCAAATTGCTTGACTAGCATCTATGAATTAATGGAAGATGTTGAGGCCTGTTTTTAACTTAACTTTTTGCTTGTTTGAATTGTTGTTGTTTTTAATTTATTTCAACATTAACATTTCTACTATGTTAACAGAAACAGTGCCAATGTACTCATACAGTTTTTCCTGTGTTTGTGCCTCCAGTCTTTGATATGGAACAGTGACTTAATCCTTTGGTTACTGTCTTTGGACAGTATTTATTTTTGAAATATGTCATTGCATTTAATATTTTTTTTTTAAAAAAAAGAACTATTTTTCTCTCTCTTTCTCTCTCATCTGCAATTTTTCCTGTCATCTATTCTCATCCTCTCTGTCTTTTTAATTTTACCATTTCATTAAATTTTGCTTTTTCATGGTGGTGGTTGGTAGGGGGATATCATTTTTGTGTTTACTCATTAAACTTTTTGCTACATCTTTTACTAGTGCGGAAATTGAAGGATCATTGTTGGAATCAGATGGCCTGAAGGAGCCTGGTTCAAAGAAGAGGTAAATACCAACCTCTTGGCTCTTGATGATTCTTTGATTGCTAGTTAGTTTCCCTGCTTTTCTGTAATCCAAGTTCTCAGTGTATTTTTCATATTCTTGAGCCTCCAAGATTAGACATAGCATCATGATAGGAAAAAAGGGGAAATGAACATGTTGAGCCTCCAATTTCTCAGTGTATTTTTCATTTGCTAGTTAGTTTCGTTCTTCCAGTGTTTTTCTCTTCTCTTTCGTTTCAATTTCTTTATATTTCTTCCTATTTGCCAAAAACCAGCCATTCTCTTTTTTTATTTACTTATAAAATAATAAAAATAAGGTTTTGGAAAATTTTCCCTATGTGGAAACACAATCGAAGATCAAAGAATCTCGGCACATTTTGACTCCCTAAACTCAGCAAATGAAGCTGAGAGGCAGACTAAGATTTCCTTTGGGTTAGGGGAGGAGAGGCCGTTTCCAGCTCTTACTGTCTGGTTGCTATTCTTAGAAGTCCGGTAAAAGAAAGAACTATTTGCAAGCTGTTAAGATATCTTCTTTTAGGGGAAAATTTCATATAGCAATTGAATTTAACTTTTCACTCAATTACATTACATTATTAGAGTTGAAGGAATCTATATGGATGGTTGTAACGATACATATAGAACAAGTATGTTTTCTTGAACAAATTACTGAACCTCCTATTCCTCCCCCTGTCCCAAAGGGGAGTGAAAAGAAGAATAACTAACGAGCAATCAAATTAAACGCTGCAGGGTCAGAACTGAATCAAGTTGTGCATCTAGCTCAAAAGCATGTAGGGAGAAGCTGCGGAGGGACAGATTAAATGACAAGTAATCCTCCTCTTTGTTTCTCTCTCTCACACTTGCTTGATAATGCATATGCATGTACCGAGAAGCATATGTTTTATTTCTATAAGGAATGAGCATATGAAACTTGACAGATTTTTGGAATTGAGTGCTACTCTGGAGCCTGGAAGGGCACTGAAGACCGACAAGGCTGCCATTTTGATTGATGCTGTTCGAATGGTCACTCAGTTACGCGGTGAAGCCCAGGTGTTGAAGGACTCAAATACAAGCCTATTAGAGAAGATTAAAGATTTGAAGGTAGGTCTTGTACAATTATCTAACCGAGAAGAAACTTACTCTAATCTCTGAGTATAATCTCCAAGTATTTCCATTACATTAGTAAATTCCACTTGAAAGAATCTTGCGTACTGTAACATTAGTGAGGCGAGGATTTTGATTTGCGTACTTATAAGACTTCAAATTTTCACTTTTCCCACTTTTTTAGGCTGAGAAGAATGAGCTTCGTGATGAGAAGCATAGGCTAAAACTGGAGAAGGAGAAGTTGGAGCAGCAACTAAAAGCCACGAATTCACAACCTGGCTTCATGCCTCCAGCCATCCCTGCAACTTTTGCAGCACAAGGCCAAGCACCTGGAAACAAGTTGGTTCCCTTCATTGGCTACCCAGGAGTTGCCATGTGGCAGTTCATGCCACCTGCAGCTGTTGACACCTCGCAAGATCACGTACTTCGACCCCCTGTTGCTTAATTAGGCAGCCAGAAAACTACCAGGGTGGGTTGGGATTGCATATTTTGACCCAAACATTTGTACTGATTCTACCATTGTTCTTGACACATACTTCAAAACTTCGTTTTAACTGGTGGATAATATGGTGGAATCATTGATCTTGACTGTATTTGCAACCTGTAGACTATTTATGGAATCAATGCTGGTTTTTACATGTAAAAATGTGAATAAGTTAATCCAGCATATGAATGTTCATGAGAAGAATAGGCATAACAATGTGATGTTTGCCTGCATTACAGCCAGAGAGACTGAATTTCCTCTTCTTTTTCTTCCCTCTTGAGTATCATCCGCTGGCCC ATGGAAATTCTCCATTTTTTGTTCATACATTTTTGGCTCCAACTGCGACACACTTCTCTTAACGCTGGCCTCTCTCTTCTCTCTTTCACTTTACTGCTTTCAATTCGACGAAAATTCACGCTGGAAACATCGCCCTTCCTGCTCAATCACCATCAACGCGATATGGTATCCCCTGAAACCACCAATTGGCTCTTTGATTATGCGTTAATCGATGATATTCCTGTTCCTGATGATGTCAATTTCTCTGCACCTACTGCCGGTTTCTCTTGGTCCATGCAACCCTTCAACGCCTCCTCTGATGTCAGTGCGGAAATTGAAGGATCATTGTTGGAATCAGATGGCCTGAAGGAGCCTGGTTCAAAGAAGAGGGTCAGAACTGAATCAAGTTGTGCATCTAGCTCAAAAGCATGTAGGGAGAAGCTGCGGAGGGACAGATTAAATGACAAATTTTTGGAATTGAGTGCTACTCTGGAGCCTGGAAGGGCACTGAAGACCGACAAGGCTGCCATTTTGATTGATGCTGTTCGAATGGTCACTCAGTTACGCGGTGAAGCCCAGGTGTTGAAGGACTCAAATACAAGCCTATTAGAGAAGATTAAAGATTTGAAGGCTGAGAAGAATGAGCTTCGTGATGAGAAGCATAGGCTAAAACTGGAGAAGGAGAAGTTGGAGCAGCAACTAAAAGCCACGAATTCACAACCTGGCTTCATGCCTCCAGCCATCCCTGCAACTTTTGCAGCACAAGGCCAAGCACCTGGAAACAAGTTGGTTCCCTTCATTGGCTACCCAGGAGTTGCCATGTGGCAGTTCATGCCACCTGCAGCTGTTGACACCTCGCAAGATCACGTACTTCGACCCCCTGTTGCTTAATTAGGCAGCCAGAAAACTACCAGGGTGGGTTGGGATTGCATATTTTGACCCAAACATTTGTACTGATTCTACCATTGTTCTTGACACATACTTCAAAACTTCGTTTTAACTGGTGGATAATATGGTGGAATCATTGATCTTGACTGTATTTGCAACCTGTAGACTATTTATGGAATCAATGCTGGTTTTTACATGTAAAAATGTGAATAAGTTAATCCAGCATATGAATGTTCATGAGAAGAATAGGCATAACAATGTGATGTTTGCCTGCATTACAGCCAGAGAGACTGAATTTCCTCTTCTTTTTCTTCCCTCTTGAGTATCATCCGCTGGCCC ATGGAAATTCTCCATTTTTTGTTCATACATTTTTGGCTCCAACTGCGACACACTTCTCTTAACGCTGGCCTCTCTCTTCTCTCTTTCACTTTACTGCTTTCAATTCGACGAAAATTCACGCTGGAAACATCGCCCTTCCTGCTCAATCACCATCAACGCGATATGGTATCCCCTGAAACCACCAATTGGCTCTTTGATTATGCGTTAATCGATGATATTCCTGTTCCTGATGATGTCAATTTCTCTGCACCTACTGCCGGTTTCTCTTGGTCCATGCAACCCTTCAACGCCTCCTCTGATGTCAGTGCGGAAATTGAAGGATCATTGTTGGAATCAGATGGCCTGAAGGAGCCTGGTTCAAAGAAGAGGGTCAGAACTGAATCAAGTTGTGCATCTAGCTCAAAAGCATGTAGGGAGAAGCTGCGGAGGGACAGATTAAATGACAAATTTTTGGAATTGAGTGCTACTCTGGAGCCTGGAAGGGCACTGAAGACCGACAAGGCTGCCATTTTGATTGATGCTGTTCGAATGGTCACTCAGTTACGCGGTGAAGCCCAGGTGTTGAAGGACTCAAATACAAGCCTATTAGAGAAGATTAAAGATTTGAAGGCTGAGAAGAATGAGCTTCGTGATGAGAAGCATAGGCTAAAACTGGAGAAGGAGAAGTTGGAGCAGCAACTAAAAGCCACGAATTCACAACCTGGCTTCATGCCTCCAGCCATCCCTGCAACTTTTGCAGCACAAGGCCAAGCACCTGGAAACAAGTTGGTTCCCTTCATTGGCTACCCAGGAGTTGCCATGTGGCAGTTCATGCCACCTGCAGCTGTTGACACCTCGCAAGATCACGTACTTCGACCCCCTGTTGCTTAA
BLAST of CmoCh04G010080 vs. Swiss-Prot
Match: ILR3_ARATH (Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 1.2e-77 Identity = 168/240 (70.00%), Postives = 186/240 (77.50%), Query Frame = 1
BLAST of CmoCh04G010080 vs. Swiss-Prot
Match: BH115_ARATH (Transcription factor bHLH115 OS=Arabidopsis thaliana GN=BHLH115 PE=2 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 6.2e-69 Identity = 146/236 (61.86%), Postives = 173/236 (73.31%), Query Frame = 1
BLAST of CmoCh04G010080 vs. Swiss-Prot
Match: BH034_ARATH (Transcription factor bHLH34 OS=Arabidopsis thaliana GN=BHLH34 PE=2 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 2.2e-37 Identity = 104/196 (53.06%), Postives = 128/196 (65.31%), Query Frame = 1
BLAST of CmoCh04G010080 vs. Swiss-Prot
Match: BH104_ARATH (Transcription factor bHLH104 OS=Arabidopsis thaliana GN=BHLH104 PE=2 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 1.5e-35 Identity = 91/180 (50.56%), Postives = 120/180 (66.67%), Query Frame = 1
BLAST of CmoCh04G010080 vs. Swiss-Prot
Match: BH121_ARATH (Transcription factor bHLH121 OS=Arabidopsis thaliana GN=BHLH121 PE=2 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 2.7e-11 Identity = 63/186 (33.87%), Postives = 90/186 (48.39%), Query Frame = 1
BLAST of CmoCh04G010080 vs. TrEMBL
Match: M5WHW1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009077mg PE=4 SV=1) HSP 1 Score: 355.5 bits (911), Expect = 6.0e-95 Identity = 192/249 (77.11%), Postives = 210/249 (84.34%), Query Frame = 1
BLAST of CmoCh04G010080 vs. TrEMBL
Match: B9SA09_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_0181650 PE=4 SV=1) HSP 1 Score: 350.9 bits (899), Expect = 1.5e-93 Identity = 189/237 (79.75%), Postives = 203/237 (85.65%), Query Frame = 1
BLAST of CmoCh04G010080 vs. TrEMBL
Match: A0A0U2QJ25_9ROSA (BHLH transcription factor OS=Prunus pseudocerasus PE=2 SV=1) HSP 1 Score: 348.6 bits (893), Expect = 7.3e-93 Identity = 186/237 (78.48%), Postives = 203/237 (85.65%), Query Frame = 1
BLAST of CmoCh04G010080 vs. TrEMBL
Match: W9RCN9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021173 PE=4 SV=1) HSP 1 Score: 345.9 bits (886), Expect = 4.8e-92 Identity = 191/240 (79.58%), Postives = 205/240 (85.42%), Query Frame = 1
BLAST of CmoCh04G010080 vs. TrEMBL
Match: E0CT50_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g05100 PE=4 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 1.8e-91 Identity = 183/238 (76.89%), Postives = 207/238 (86.97%), Query Frame = 1
BLAST of CmoCh04G010080 vs. TAIR10
Match: AT5G54680.1 (AT5G54680.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 291.2 bits (744), Expect = 7.0e-79 Identity = 168/240 (70.00%), Postives = 186/240 (77.50%), Query Frame = 1
BLAST of CmoCh04G010080 vs. TAIR10
Match: AT1G51070.2 (AT1G51070.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 236.5 bits (602), Expect = 2.1e-62 Identity = 127/189 (67.20%), Postives = 150/189 (79.37%), Query Frame = 1
BLAST of CmoCh04G010080 vs. TAIR10
Match: AT3G23210.1 (AT3G23210.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 157.5 bits (397), Expect = 1.2e-38 Identity = 104/196 (53.06%), Postives = 128/196 (65.31%), Query Frame = 1
BLAST of CmoCh04G010080 vs. TAIR10
Match: AT4G14410.1 (AT4G14410.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 151.4 bits (381), Expect = 8.7e-37 Identity = 91/180 (50.56%), Postives = 120/180 (66.67%), Query Frame = 1
BLAST of CmoCh04G010080 vs. TAIR10
Match: AT3G19860.2 (AT3G19860.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 70.9 bits (172), Expect = 1.5e-12 Identity = 63/186 (33.87%), Postives = 90/186 (48.39%), Query Frame = 1
BLAST of CmoCh04G010080 vs. NCBI nr
Match: gi|595863858|ref|XP_007211667.1| (hypothetical protein PRUPE_ppa009077mg [Prunus persica]) HSP 1 Score: 355.5 bits (911), Expect = 8.6e-95 Identity = 192/249 (77.11%), Postives = 210/249 (84.34%), Query Frame = 1
BLAST of CmoCh04G010080 vs. NCBI nr
Match: gi|1009110887|ref|XP_015898140.1| (PREDICTED: transcription factor ILR3 [Ziziphus jujuba]) HSP 1 Score: 353.6 bits (906), Expect = 3.3e-94 Identity = 188/237 (79.32%), Postives = 205/237 (86.50%), Query Frame = 1
BLAST of CmoCh04G010080 vs. NCBI nr
Match: gi|255563653|ref|XP_002522828.1| (PREDICTED: transcription factor ILR3 [Ricinus communis]) HSP 1 Score: 350.9 bits (899), Expect = 2.1e-93 Identity = 189/237 (79.75%), Postives = 203/237 (85.65%), Query Frame = 1
BLAST of CmoCh04G010080 vs. NCBI nr
Match: gi|950804806|gb|ALN42131.1| (bHLH transcription factor [Prunus pseudocerasus]) HSP 1 Score: 348.6 bits (893), Expect = 1.1e-92 Identity = 186/237 (78.48%), Postives = 203/237 (85.65%), Query Frame = 1
BLAST of CmoCh04G010080 vs. NCBI nr
Match: gi|703083816|ref|XP_010092311.1| (hypothetical protein L484_021173 [Morus notabilis]) HSP 1 Score: 345.9 bits (886), Expect = 6.8e-92 Identity = 191/240 (79.58%), Postives = 205/240 (85.42%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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