Carg24824 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24824
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	transcription factor ILR3-like
Location	Cucurbita_argyrosperma_scaffold_157 : 224437 .. 228731 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCTACCCGCCACCACTTCTTTCCCTTATTCCCCAAATCCGATTCAGATTCTCCATTTTTTCTCCTCTCTCCGTTAAATTTCAGCTTCACTTCTTCAATTCCAACGAAACTGAAGCTCCAAACATCGCCCTTCCTGTTGAATCGCCATCGACATGGTATCCCCTGAAACCACCAATTGGCTCTTCGATTATGCGTTAATGGATGATATTCCTGTTGCCGATGCAAATTTCTCTGCCCCCACTGCCGGCTTCTCCTGGTCCATGCCAACGCTCAACGCCTCCTCCAATGTCAGGTTTTATTTCTCTCTCATCTGGATTCAATTTTGTTCCATTTTCCTGTTCTAGCCGTTGACAATTCATAGATTGCTGACCCTTTTGTCGGATTCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAAAGTCCCTCGAGTATGCACTTATGGACTTCTAATTGTGATCTAAGATTCGACTGTGAGCAGTTGCTATGCTTAAGACTTTGATCTTGCTACTTCGATTTGTATCTGCATCTGCAACTTTCATTTTCTCTCTTAATTTAGTACTAATTTATACAGCTTCAAGTGTTTGATTGAAGCTTGTAGGTTGGAAATTTAAATGGGTGGGTTCAAAATTTGCAGTATGGATAACTTGTTTCATTGAATTTTAGCACATTTTCACCAGAGCTTGGTCAGAGTCATTTTCTCTTGTTGACTAAATAAATATTAAGAGATTTTCCCTTTCAAGTATTGTTCCAAACCATCTTCCCCCATTAACTAGGGACGCAATTGGCAAGTTCTATTGACTTGCGGAATTTGTTTTTAGTTTAGTACTAACCGGTAAATATTCCCTTAACGTGAAGCTATAATGAAATGAACTTTGAAATGTATTTATCTTTATAAAGAGAAACTTTATATGATCTTTATTTTGAACTTTTAATGGTCTGTACTTTCTTCATGTCAGGCATGAGTCTTTGACTGCTTTCTTTCACTCTGGTGTCTCTTAAATATTATATGTATACTTCGAGGAAAGATAATTTGATCAAAGTAGAGGGTCTGGTTTATTTAACTATCCTCGAGAGGAACTTGTCATTTACCTGTCTTTCAAGCTTCATTTTTGTTTACCAAATTGCTTAGTTAACGTCTATGAATTGATGGAAGATTTTGAGTCCTGTACTTGAACATAACTTTTGTTTGTTTGAATTATGAATGTTTCTAATATTATTTCAACATTTAAACTGCAAGACCCTATATTTGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTGAAATTGTGAGGTTGATGGCGATACGTAACGTGCCAAAGTGGATAATACCTGCTAGCGGTGACCTCGGGCTGTTACAAATGATATCAGAGCCAAACACCGGGTGATGTGCCAGCGAGCATGCTGGGCCCCAAGGGGGGTAGATTGTGAGATCCCACATTAGTTGGAGAGGGGAACGAAATATTTTTTCATAAGGATGTGGAAACCTCTCCCTAGTAGACTCGTTTTAAAACTGTGAGGCTGACAGCGACACGTAACGGGCCAAAGCAGACAATATCCTACCTAAACTACTTGTATGTTAACAAAGAGAGTGCTGGTGCACTTATAGAGTTCTTCCTGTGGTGGTACCACATGCCTTTCGATACGGAACAGTGACTTGATCTTTTGGTTACTGTCTGAGTTTCTTCTAACTGTATACATCCCTTTGATATGTTATTGCATTTAGTAAAAAAAAAAAAAATCTCTCTCCCCTCCCCCTCGGCACTTCTGTTATATATTCACATTCTCTGTCTATTTAATTTTACCATTTCGAAAATTTCTGCTTTTTGGTGATGGTGGATGGTTGGGAGATATTATTTTGCATTTACTCATCAAACTTTTTGCTCCATCCTTTGCTAGCACGGAAATTGAAGGATCATTGTTCGAATCGGATGGCCTGAAGGAGCCTGGTTCAAAGAAGAGGTAAATACCAGCCTCTTGGCTCTTGATGGTTCTACAGTTCCCTGGTTTGTTGCAATCCTATTTCTCAGACATTTTTCTATTCTTGAGCCTCCAAAATTAGAGATAACATTGTGATTGAAAAAAAGGGAAACGGACTTGTTAACAAATTAAAACTTGAATGTGACGAGTGGATAAGCTCCAGACTGTAACATTTAGAAGTATGCATTACCCCATTATCCCTTGTGAACATTTAGGGGTGGTGAAGTTCTTGTAGGCAAGCTCCTATGGAAACCCAACTCTAACGAGGTGGAGACTCCCTCGACGTTAGAGTTGGATATGGGAATAACCTTTTCTTACTAAATTGATTTTAGAGGTGCAGATGAAGAATGCACCGTTCACCTTGATCTAAACTTCGACAAACACACCCAACTCAAATCTCTGAAGTTTTACACACCTCAAATCTCTGAAGTTTTACAGGTATTATTTGCACTATTTTATAATTAACTATATAAATATTAATTATTTTTTATAAAATTACTAGTTTCACTAACAAATAATTAGAAATAAATCTATATTCTTAAGCCAAAAATTGTATATTTCATATATATTTGCAGAAAACCAGCAAGCTTTTTTTAATTAAATAAGGTTTTGGAAAATTTTCTCCTTGTGAACCCGATTCAAGATCAAAGAAACTGTGTGCGTTTTGTCGCCCTAAAATCAGAAGATGAAGAAGAGAGGACTAAGATATCCTTAGGGTCTGGGATGGAGAGGCCATTTCCAGCCCTCACCTTCTTGTTGCTATTCTTAAAAGCCTTGTAGAGAAAGAGCTATTGCAAATTGATAAACTCTTAAAAATCTTCTTTTAGGGGAGATTTTTCATATAGCGATTGTATTTATCTTTTTAATCTAGTTCCTCTTTAGAGTCGATGGAATCTGTATTGATGATCGTAACGATACGTATAGAAGCAGTCTGTTCCTTGAACAAATTATTCAACATCTCATTCATCCCTCCATCCAAAGGTTAGGGATAAAGAGAGTAAATAATAAACAAACAAACAAAATGCTGCAGGGTCAGAACTGAAACAAGTTGCGCATCTAGCTCAAAAGCATGTCGGGAGAAGCTGCGGAGGGACAGACTAAATGACAAGTAAAAGCTCCTCCCCTTTCTCTCTCGCTCGCTCTTCACACAACAATGCACATTAGCGAGATGTGTGTGTTTTATTTCTATTAGGAGTGAATACATATGAAACTTGACAGGTTTCTGGAATTGGGAGCTATTTTGGAGCCCGGAAGACCACCTAAGACCGACAAGGCTGCCATTTTGATTGATGCTGTTCGAATTGTCGCTCAGTTACGTGGTGAAGCGAAGATGTTGAAAGATTCAAATACAAGTCTATCAGAGAAGATTAAAGAGTTGAAGGTTAGTCTTCTACAATTATCTGACCAAGAAAATCTCTATTTATTTCATTACGTTGTAGTATTCCATCTGGAAGATTGTTACATATTACTTACAACATTTGTGATGTGAGGATGTCGATCTGCATACTCTTTAAGACTTCCAAGTTTCTCTGTTCCCACTTATTTAGGCTGAAAAGAATGAGCTTCGTGATGAGAAGCAGAGGTTAAAAATGGAGAAAGAGAAGTTGGAGCAGCAACTAAAAGACATGAATTCACAACCTGGCTTCTTGCCTCCAGCCATCCCTCCCACTTTTGCTGCTCAAGGCCAAGCAGCTGGAAACAAGTTGGTTCCTTTCATCAGCTACCCAGGAGTTGCCATGTGGCAGTTCATGCCACCTGCAGCGGTCGACACCTCACAAGATCACGTACTCCGCCCTCCTGTTGCTTAATTAGGCAACCTGAAAACGAGGGGCGGTTTGAGATTGCACATTCTGACTACCCCATTTGTACTGATTCTACCATTATTCTCGACTCGACGCTTGTTTCATATCCTTGTTTAACTGGATGATGATATGATGGCTATATCTCGACTGTATTTGCAAGTTGTAGACTTTTTATGGAATCAATGCTGGGTTTTAGCTGTAAGAATGTGAATAAGTTAAACCAGCATGTGAATGTTGATGAGAATAGGCTAACAATGGGATGTTTTTGCCTGCAATACTGCTAGAGACTGATTTTTCTTGGATGGCTAGTGAACTGTACATATGAATTTGCAGCCAGTCCGTGGGAATATCCTTTTCTTCTGTCTTTCTTTCTTTGTTCTTCCTTGCCCTTGTTTAGTACAGAAACATTTTGTGTGCTTGCCATTCATGGTCTTGGAGACCTTTACTCCAGAATGAAACAAAGATTCTGTTC

mRNA sequence

GGCTACCCGCCACCACTTCTTTCCCTTATTCCCCAAATCCGATTCAGATTCTCCATTTTTTCTCCTCTCTCCGTTAAATTTCAGCTTCACTTCTTCAATTCCAACGAAACTGAAGCTCCAAACATCGCCCTTCCTGTTGAATCGCCATCGACATGGTATCCCCTGAAACCACCAATTGGCTCTTCGATTATGCGTTAATGGATGATATTCCTGTTGCCGATGCAAATTTCTCTGCCCCCACTGCCGGCTTCTCCTGGTCCATGCCAACGCTCAACGCCTCCTCCAATGTCAGCACGGAAATTGAAGGATCATTGTTCGAATCGGATGGCCTGAAGGAGCCTGGTTCAAAGAAGAGAGGTGCAGATGAAGAATGCACCGTTCACCTTGATCTAAACTTCGACAAACACACCCAACTCAAATCTCTGAAGGTCAGAACTGAAACAAGTTGCGCATCTAGCTCAAAAGCATGTCGGGAGAAGCTGCGGAGGGACAGACTAAATGACAAGTTTCTGGAATTGGGAGCTATTTTGGAGCCCGGAAGACCACCTAAGACCGACAAGGCTGCCATTTTGATTGATGCTGTTCGAATTGTCGCTCAGTTACGTGGTGAAGCGAAGATGTTGAAAGATTCAAATACAAGTCTATCAGAGAAGATTAAAGAGTTGAAGGCTGAAAAGAATGAGCTTCGTGATGAGAAGCAGAGGTTAAAAATGGAGAAAGAGAAGTTGGAGCAGCAACTAAAAGACATGAATTCACAACCTGGCTTCTTGCCTCCAGCCATCCCTCCCACTTTTGCTGCTCAAGGCCAAGCAGCTGGAAACAAGTTGGTTCCTTTCATCAGCTACCCAGGAGTTGCCATGTGGCAGTTCATGCCACCTGCAGCGGTCGACACCTCACAAGATCACGTACTCCGCCCTCCTGTTGCTTAATTAGGCAACCTGAAAACGAGGGGCGGTTTGAGATTGCACATTCTGACTACCCCATTTGTACTGATTCTACCATTATTCTCGACTCGACGCTTGTTTCATATCCTTGTTTAACTGGATGATGATATGATGGCTATATCTCGACTGTATTTGCAAGTTGTAGACTTTTTATGGAATCAATGCTGGGTTTTAGCTGTAAGAATGTGAATAAGTTAAACCAGCATGTGAATGTTGATGAGAATAGGCTAACAATGGGATGTTTTTGCCTGCAATACTGCTAGAGACTGATTTTTCTTGGATGGCTAGTGAACTGTACATATGAATTTGCAGCCAGTCCGTGGGAATATCCTTTTCTTCTGTCTTTCTTTCTTTGTTCTTCCTTGCCCTTGTTTAGTACAGAAACATTTTGTGTGCTTGCCATTCATGGTCTTGGAGACCTTTACTCCAGAATGAAACAAAGATTCTGTTC

Coding sequence (CDS)

ATGGTATCCCCTGAAACCACCAATTGGCTCTTCGATTATGCGTTAATGGATGATATTCCTGTTGCCGATGCAAATTTCTCTGCCCCCACTGCCGGCTTCTCCTGGTCCATGCCAACGCTCAACGCCTCCTCCAATGTCAGCACGGAAATTGAAGGATCATTGTTCGAATCGGATGGCCTGAAGGAGCCTGGTTCAAAGAAGAGAGGTGCAGATGAAGAATGCACCGTTCACCTTGATCTAAACTTCGACAAACACACCCAACTCAAATCTCTGAAGGTCAGAACTGAAACAAGTTGCGCATCTAGCTCAAAAGCATGTCGGGAGAAGCTGCGGAGGGACAGACTAAATGACAAGTTTCTGGAATTGGGAGCTATTTTGGAGCCCGGAAGACCACCTAAGACCGACAAGGCTGCCATTTTGATTGATGCTGTTCGAATTGTCGCTCAGTTACGTGGTGAAGCGAAGATGTTGAAAGATTCAAATACAAGTCTATCAGAGAAGATTAAAGAGTTGAAGGCTGAAAAGAATGAGCTTCGTGATGAGAAGCAGAGGTTAAAAATGGAGAAAGAGAAGTTGGAGCAGCAACTAAAAGACATGAATTCACAACCTGGCTTCTTGCCTCCAGCCATCCCTCCCACTTTTGCTGCTCAAGGCCAAGCAGCTGGAAACAAGTTGGTTCCTTTCATCAGCTACCCAGGAGTTGCCATGTGGCAGTTCATGCCACCTGCAGCGGTCGACACCTCACAAGATCACGTACTCCGCCCTCCTGTTGCTTAA

Protein sequence

MVSPETTNWLFDYALMDDIPVADANFSAPTAGFSWSMPTLNASSNVSTEIEGSLFESDGLKEPGSKKRGADEECTVHLDLNFDKHTQLKSLKVRTETSCASSSKACREKLRRDRLNDKFLELGAILEPGRPPKTDKAAILIDAVRIVAQLRGEAKMLKDSNTSLSEKIKELKAEKNELRDEKQRLKMEKEKLEQQLKDMNSQPGFLPPAIPPTFAAQGQAAGNKLVPFISYPGVAMWQFMPPAAVDTSQDHVLRPPVA

Homology

[Close]

BLAST of Carg24824 vs. NCBI nr
Match: XP_022932170.1 (transcription factor ILR3-like [Cucurbita moschata])

HSP 1 Score: 365.9 bits (938), Expect = 1.1e-97
Identity = 234/258 (90.70%), Postives = 234/258 (90.70%), Query Frame = 0


Query: 1   MVSPETTNWLFDYALMDDIPVADANFSAPTAGFSWSMPTLNASSNVSTEIEGSLFESDGL 60
           MVSPETTNWLFDYALMDDIPVADANFSAPTAGFSWSMPTLNASSNVSTEIEGSLFESDGL
Sbjct: 1   MVSPETTNWLFDYALMDDIPVADANFSAPTAGFSWSMPTLNASSNVSTEIEGSLFESDGL 60

Query: 61  KEPGSKKRGADEECTVHLDLNFDKHTQLKSLKVRTETSCASSSKACREKLRRDRLNDKFL 120
           KEPGSKKR                        VRTETSCASSSKACREKLRRDRLNDKFL
Sbjct: 61  KEPGSKKR------------------------VRTETSCASSSKACREKLRRDRLNDKFL 120

Query: 121 ELGAILEPGRPPKTDKAAILIDAVRIVAQLRGEAKMLKDSNTSXXXXXXXXXXXXXXXXX 180
           ELGAILEPGRPPKTDKAAILIDAVRIVAQLRGEAKMLKDSNTSXXXXXXXXXXXXXXXXX
Sbjct: 121 ELGAILEPGRPPKTDKAAILIDAVRIVAQLRGEAKMLKDSNTSXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXSQPGFLPPAIPPTFAAQGQAAGNKLVPFISYPGVAMWQFM 240
           XXXXXXXXXXXXXXXXXXXXSQPGFLPPAIPPTFAAQGQAAGNKLVPFISYPGVAMWQFM
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXSQPGFLPPAIPPTFAAQGQAAGNKLVPFISYPGVAMWQFM 234

Query: 241 PPAAVDTSQDHVLRPPVA 259
           PPAAVDTSQDHVLRPPVA
Sbjct: 241 PPAAVDTSQDHVLRPPVA 234

[Close]

BLAST of Carg24824 vs. NCBI nr
Match: XP_022985260.1 (transcription factor ILR3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 364.0 bits (933), Expect = 4.2e-97
Identity = 233/258 (90.31%), Postives = 235/258 (91.09%), Query Frame = 0


Query: 1   MVSPETTNWLFDYALMDDIPVADANFSAPTAGFSWSMPTLNASSNVSTEIEGSLFESDGL 60
           MVSPETTNWLFDYALMDDIPVADANFSAPTAGFSWSMP LNASSNVSTEIEGSLFESDGL
Sbjct: 1   MVSPETTNWLFDYALMDDIPVADANFSAPTAGFSWSMPPLNASSNVSTEIEGSLFESDGL 60

Query: 61  KEPGSKKRGADEECTVHLDLNFDKHTQLKSLKVRTETSCASSSKACREKLRRDRLNDKFL 120
           KEPGSKKR                  + K  +VRTETSCASSSKACREKLRRDRLNDKFL
Sbjct: 61  KEPGSKKR------------------RTKFCRVRTETSCASSSKACREKLRRDRLNDKFL 120

Query: 121 ELGAILEPGRPPKTDKAAILIDAVRIVAQLRGEAKMLKDSNTSXXXXXXXXXXXXXXXXX 180
           ELGAILEPGRPPKTDKAAILIDAVRIVAQLRGEAKMLKDSNTSXXXXXXXXXXXXXXXXX
Sbjct: 121 ELGAILEPGRPPKTDKAAILIDAVRIVAQLRGEAKMLKDSNTSXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXSQPGFLPPAIPPTFAAQGQAAGNKLVPFISYPGVAMWQFM 240
           XXXXXXXXXXXXXXXXXXXXSQPGFLPPAIP TFAAQGQAAGNKLVPFISYPGVAMWQFM
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXSQPGFLPPAIPATFAAQGQAAGNKLVPFISYPGVAMWQFM 240

Query: 241 PPAAVDTSQDHVLRPPVA 259
           PPAAVDTSQDHVLRPPVA
Sbjct: 241 PPAAVDTSQDHVLRPPVA 240

[Close]

BLAST of Carg24824 vs. NCBI nr
Match: XP_022985261.1 (transcription factor ILR3-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 360.5 bits (924), Expect = 4.6e-96
Identity = 232/258 (89.92%), Postives = 232/258 (89.92%), Query Frame = 0


Query: 1   MVSPETTNWLFDYALMDDIPVADANFSAPTAGFSWSMPTLNASSNVSTEIEGSLFESDGL 60
           MVSPETTNWLFDYALMDDIPVADANFSAPTAGFSWSMP LNASSNVSTEIEGSLFESDGL
Sbjct: 1   MVSPETTNWLFDYALMDDIPVADANFSAPTAGFSWSMPPLNASSNVSTEIEGSLFESDGL 60

Query: 61  KEPGSKKRGADEECTVHLDLNFDKHTQLKSLKVRTETSCASSSKACREKLRRDRLNDKFL 120
           KEPGSKKR                        VRTETSCASSSKACREKLRRDRLNDKFL
Sbjct: 61  KEPGSKKR------------------------VRTETSCASSSKACREKLRRDRLNDKFL 120

Query: 121 ELGAILEPGRPPKTDKAAILIDAVRIVAQLRGEAKMLKDSNTSXXXXXXXXXXXXXXXXX 180
           ELGAILEPGRPPKTDKAAILIDAVRIVAQLRGEAKMLKDSNTSXXXXXXXXXXXXXXXXX
Sbjct: 121 ELGAILEPGRPPKTDKAAILIDAVRIVAQLRGEAKMLKDSNTSXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXSQPGFLPPAIPPTFAAQGQAAGNKLVPFISYPGVAMWQFM 240
           XXXXXXXXXXXXXXXXXXXXSQPGFLPPAIP TFAAQGQAAGNKLVPFISYPGVAMWQFM
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXSQPGFLPPAIPATFAAQGQAAGNKLVPFISYPGVAMWQFM 234

Query: 241 PPAAVDTSQDHVLRPPVA 259
           PPAAVDTSQDHVLRPPVA
Sbjct: 241 PPAAVDTSQDHVLRPPVA 234

[Close]

BLAST of Carg24824 vs. NCBI nr
Match: XP_023520448.1 (transcription factor ILR3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 353.6 bits (906), Expect = 5.7e-94
Identity = 229/258 (88.76%), Postives = 229/258 (88.76%), Query Frame = 0


Query: 1   MVSPETTNWLFDYALMDDIPVADANFSAPTAGFSWSMPTLNASSNVSTEIEGSLFESDGL 60
           MVSPETTNWLFDYALMDDIPVADANFSA TAGFSWSMP LNASSNVSTEIEGSLFESD L
Sbjct: 1   MVSPETTNWLFDYALMDDIPVADANFSASTAGFSWSMPPLNASSNVSTEIEGSLFESDSL 60

Query: 61  KEPGSKKRGADEECTVHLDLNFDKHTQLKSLKVRTETSCASSSKACREKLRRDRLNDKFL 120
           KEPGSKKR                        VRTETSCASSSKACREKLRRDRLNDKFL
Sbjct: 61  KEPGSKKR------------------------VRTETSCASSSKACREKLRRDRLNDKFL 120

Query: 121 ELGAILEPGRPPKTDKAAILIDAVRIVAQLRGEAKMLKDSNTSXXXXXXXXXXXXXXXXX 180
           ELGAILEPGRPPKTDKAAILIDAVRIV QLRGEAKMLKDSNTSXXXXXXXXXXXXXXXXX
Sbjct: 121 ELGAILEPGRPPKTDKAAILIDAVRIVTQLRGEAKMLKDSNTSXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXSQPGFLPPAIPPTFAAQGQAAGNKLVPFISYPGVAMWQFM 240
           XXXXXXXXXXXXXXXXXXXXSQPGFLPPAIP TFAAQGQAAGNKLVPFISYPGVAMWQFM
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXSQPGFLPPAIPATFAAQGQAAGNKLVPFISYPGVAMWQFM 234

Query: 241 PPAAVDTSQDHVLRPPVA 259
           PPAAVDTSQDHVLRPPVA
Sbjct: 241 PPAAVDTSQDHVLRPPVA 234

[Close]

BLAST of Carg24824 vs. NCBI nr
Match: XP_022154955.1 (transcription factor ILR3 [Momordica charantia])

HSP 1 Score: 324.7 bits (831), Expect = 2.8e-85
Identity = 213/258 (82.56%), Postives = 217/258 (84.11%), Query Frame = 0


Query: 1   MVSPETTNWLFDYALMDDIPVADANFSAPTAGFSWSMPTLNASSNVSTEIEGSLFESDGL 60
           MVSPETTNWLFDYALMDDIPV D NFS  + GFSWSMP LN SSNVS E EGSL +SD L
Sbjct: 1   MVSPETTNWLFDYALMDDIPVTDGNFSGASTGFSWSMPALNGSSNVSAENEGSLLDSDCL 60

Query: 61  KEPGSKKRGADEECTVHLDLNFDKHTQLKSLKVRTETSCASSSKACREKLRRDRLNDKFL 120
           KEPGSKKR                        VRTE+SCASSSKACREKLRRDRLNDKFL
Sbjct: 61  KEPGSKKR------------------------VRTESSCASSSKACREKLRRDRLNDKFL 120

Query: 121 ELGAILEPGRPPKTDKAAILIDAVRIVAQLRGEAKMLKDSNTSXXXXXXXXXXXXXXXXX 180
           ELGAILEPGRPPKTDKAAILIDAVRIV QLRGEA+MLKDSNTSXXXXXXXXXXXXXXXXX
Sbjct: 121 ELGAILEPGRPPKTDKAAILIDAVRIVTQLRGEAQMLKDSNTSXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXSQPGFLPPAIPPTFAAQGQAAGNKLVPFISYPGVAMWQFM 240
           XXXXXXXXXXXXXXXXXXXX  PGFLPPAIP TFAAQGQA GNKLVPFI YPGVAMWQFM
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXPGFLPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFM 234

Query: 241 PPAAVDTSQDHVLRPPVA 259
           PPAAVDTSQDHVLRPPVA
Sbjct: 241 PPAAVDTSQDHVLRPPVA 234

[Close]

BLAST of Carg24824 vs. TAIR10
Match: AT5G54680.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 203.0 bits (515), Expect = 2.3e-52
Identity = 161/263 (61.22%), Postives = 178/263 (67.68%), Query Frame = 0


Query: 1   MVSPETTNWLFDYALMDDIPVADANFSAPTAGFSWSM-PTLNASSNVSTEIEGSLFESDG 60
           MVSPE  NW+ D      I     +F+    GFSW +   +  SSN S  ++GS   S+ 
Sbjct: 1   MVSPENANWICDL-----IDADYGSFTIQGPGFSWPVQQPIGVSSNSSAGVDGSAGNSEA 60

Query: 61  LKEPGSKKRGADEECTVHLDLNFDKHTQLKSLKVRTETSCASSSKACREKLRRDRLNDKF 120
            KEPGSKKRG                        R E+S A+  KACREK RRDRLNDKF
Sbjct: 61  SKEPGSKKRG------------------------RCESSSATXXKACREKQRRDRLNDKF 120

Query: 121 LELGAILEPGRPPKTDKAAILIDAVRIVAQLRGEA-KMLKDSNTSXXXXXXXXXXXXXXX 180
           +ELGAILEPG PPKTDKAAIL+DAVR+V QLRGEA K+       XXXXXXXXXXXXXXX
Sbjct: 121 MELGAILEPGNPPKTDKAAILVDAVRMVTQLRGEAQKLXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXSQPGFL--PPAIPPTFA-AQGQAAGNKLVPFISYPGVA 240
           XXXXXXXXXXXXXXXXXXX    QP F   PP +P  FA AQGQA GNK+VP ISYPGVA
Sbjct: 181 XXXXXXXXXXXXXXXXXXXMNAPQPSFFPAPPMMPTAFASAQGQAPGNKMVPIISYPGVA 234

Query: 241 MWQFMPPAAVDTSQDHVLRPPVA 259
           MWQFMPPA+VDTSQDHVLRPPVA
Sbjct: 241 MWQFMPPASVDTSQDHVLRPPVA 234

[Close]

BLAST of Carg24824 vs. TAIR10
Match: AT1G51070.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 135.2 bits (339), Expect = 5.8e-32
Identity = 121/213 (56.81%), Postives = 139/213 (65.26%), Query Frame = 0


Query: 47  STEIEGSLFESDGLKEPGSKKRGADEECTVHLDLNFDKHTQLKSLKVRTETSCASSSKAC 106
           S E++G L ++D +KEP S+KR                        ++TE+   S+SKAC
Sbjct: 104 SVEVDGFLCDADVIKEPSSRKR------------------------IKTESCTGSNSKAC 163

Query: 107 REKLRRDRLNDKFLELGAILEPGRPPKTDKAAILIDAVRIVAQLRGEAKMLKDSNTSXXX 166
           REK RRDRLNDKF EL ++LEPGR PKTDK AI+                       XXX
Sbjct: 164 REKQRRDRLNDKFTELSSVLEPGRTPKTDKVAIINXXXXXXXXXXXXXXXXXXXXXXXXX 223

Query: 167 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPGFLPPAIP-PTFAAQGQAAGNKL 226
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +QP   P  +P P   +Q QA G+KL
Sbjct: 224 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTQPQPQPCFLPNPQTLSQAQAPGSKL 283

Query: 227 VPFISYPGVAMWQFMPPAAVDTSQDHVLRPPVA 259
           VPF +YPG AMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 284 VPFTTYPGFAMWQFMPPAAVDTSQDHVLRPPVA 292

[Close]

BLAST of Carg24824 vs. TAIR10
Match: AT3G23210.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 102.4 bits (254), Expect = 4.1e-22
Identity = 103/213 (48.36%), Postives = 129/213 (60.56%), Query Frame = 0


Query: 49  EIEGSLFESDGLKEPGSKKRGADEECTVHLDLNFDKHTQLKSLKVRTETSCAS-SSKACR 108
           ++   + E +     G+ K   +EEC               S K R   SC+   +KACR
Sbjct: 126 QVFSGVVEINSSSSVGAVKEEFEEEC---------------SGKRRRTGSCSKPGTKACR 185

Query: 109 EKLRRDRLNDKFLELGAILEPGRPPKTDKAAILIDAVRIVAQLRGEAKMLKDSNTS-XXX 168
           EKLRR++LNDKF++L ++LEPGR PKTDK+AIL DA+R+V QLRGEA  L+++N     X
Sbjct: 186 EKLRREKLNDKFMDLSSVLEPGRTPKTDKSAILDDAIRVVNQLRGEAHELQETNQKLLEX 245

Query: 169 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPGFLPPAIPPTFAAQGQAAGNKLV 228
           XXXXXXXXXXXXXXXXXXXXXXXXXXXX        PGF+P   P  F +   A      
Sbjct: 246 XXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSMVVPSPGFMPSQHPAAFHSHKMAVA---Y 305

Query: 229 PFISY-PGVAMWQFMPPAAVDTSQDHVLRPPVA 259
           P+  Y P + MW  +PPA  DTS+D    PPVA
Sbjct: 306 PYGYYPPNMPMWSPLPPADRDTSRDLKNLPPVA 320

[Close]

BLAST of Carg24824 vs. TAIR10
Match: AT4G14410.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 97.4 bits (241), Expect = 1.3e-20
Identity = 92/191 (48.17%), Postives = 117/191 (61.26%), Query Frame = 0


Query: 69  GADEECTVHLDLNFDKHTQLKSLKVRT-ETSCASSSKACREKLRRDRLNDKFLELGAILE 128
           GA +E   HLD +  +       + RT   S    +KACRE+LRR++LN++F++L ++LE
Sbjct: 105 GAVKEEQEHLDDDCSRK------RARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLE 164

Query: 129 PGRPPKTDKAAILIDAVRIVAQLRGEAKMLKDSNTSXXXXXXXXXXXXXXXXXXXXXXXX 188
           PGR PKTDK AIL DA+RI+ QLR EA  L+++N             XXXXXXXXXXXXX
Sbjct: 165 PGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEXXXXXXXXXXXXX 224

Query: 189 XXXXXXXXXXXXXSQPGFLPPAIPPTFAAQGQAAGNKLVPFISYPGVAMWQFMPPAAVDT 248
           XXXXXXXXXXXXX       P IP  F        NK+  + SY  + MW +MP +  DT
Sbjct: 225 XXXXXXXXXXXXXXPSSGFIPHIPAAF------NHNKMAVYPSYGYMPMWHYMPQSVRDT 283

Query: 249 SQDHVLRPPVA 259
           S+D  LRPP A
Sbjct: 285 SRDQELRPPAA 283

[Close]

BLAST of Carg24824 vs. TAIR10
Match: AT4G36060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 50.8 bits (120), Expect = 1.4e-06
Identity = 28/50 (56.00%), Postives = 38/50 (76.00%), Query Frame = 0


Query: 91  LKVRTETSCASSSKACREKLRRDRLNDKFLELGAILEPGRPPKTDKAAIL 141
           ++V+ E  C  S KA REKLRRD+L ++FLELG  L+P R PK+DKA++L
Sbjct: 38  VEVKKEAVC--SQKAEREKLRRDKLKEQFLELGNALDPNR-PKSDKASVL 84

[Close]

BLAST of Carg24824 vs. Swiss-Prot
Match: sp|Q9FH37|ILR3_ARATH (Transcription factor ILR3 OS=Arabidopsis thaliana OX=3702 GN=ILR3 PE=1 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 4.1e-51
Identity = 161/263 (61.22%), Postives = 178/263 (67.68%), Query Frame = 0


Query: 1   MVSPETTNWLFDYALMDDIPVADANFSAPTAGFSWSM-PTLNASSNVSTEIEGSLFESDG 60
           MVSPE  NW+ D      I     +F+    GFSW +   +  SSN S  ++GS   S+ 
Sbjct: 1   MVSPENANWICDL-----IDADYGSFTIQGPGFSWPVQQPIGVSSNSSAGVDGSAGNSEA 60

Query: 61  LKEPGSKKRGADEECTVHLDLNFDKHTQLKSLKVRTETSCASSSKACREKLRRDRLNDKF 120
            KEPGSKKRG                        R E+S A+  KACREK RRDRLNDKF
Sbjct: 61  SKEPGSKKRG------------------------RCESSSATXXKACREKQRRDRLNDKF 120

Query: 121 LELGAILEPGRPPKTDKAAILIDAVRIVAQLRGEA-KMLKDSNTSXXXXXXXXXXXXXXX 180
           +ELGAILEPG PPKTDKAAIL+DAVR+V QLRGEA K+       XXXXXXXXXXXXXXX
Sbjct: 121 MELGAILEPGNPPKTDKAAILVDAVRMVTQLRGEAQKLXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXSQPGFL--PPAIPPTFA-AQGQAAGNKLVPFISYPGVA 240
           XXXXXXXXXXXXXXXXXXX    QP F   PP +P  FA AQGQA GNK+VP ISYPGVA
Sbjct: 181 XXXXXXXXXXXXXXXXXXXMNAPQPSFFPAPPMMPTAFASAQGQAPGNKMVPIISYPGVA 234

Query: 241 MWQFMPPAAVDTSQDHVLRPPVA 259
           MWQFMPPA+VDTSQDHVLRPPVA
Sbjct: 241 MWQFMPPASVDTSQDHVLRPPVA 234

[Close]

BLAST of Carg24824 vs. Swiss-Prot
Match: sp|Q9C682|BH115_ARATH (Transcription factor bHLH115 OS=Arabidopsis thaliana OX=3702 GN=BHLH115 PE=1 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.4e-38
Identity = 139/259 (53.67%), Postives = 162/259 (62.55%), Query Frame = 0


Query: 1   MVSPETTNWLFDYALMDDIPVADANFSAPTAGFSWSMPTLNASSNVSTEIEGSLFESDGL 60
           MVSPE TNWL DY      P+ +  FS     F W    ++ S+ VS E++G L ++D +
Sbjct: 1   MVSPENTNWLSDY------PLIEGAFSDQNPTFPWQ---IDGSATVSVEVDGFLCDADVI 60

Query: 61  KEPGSKKRGADEECTVHLDLNFDKHTQLKSLKVRTETSCASSSKACREKLRRDRLNDKFL 120
           KEP S+KR                        ++TE+   S+SKACREK RRDRLNDKF 
Sbjct: 61  KEPSSRKR------------------------IKTESCTGSNSKACREKQRRDRLNDKFT 120

Query: 121 ELGAILEPGRPPKTDKAAILIDAVRIVAQLRGEAKMLKDSNTSXXXXXXXXXXXXXXXXX 180
           EL ++LEPGR PKTDK AI+                       XXXXXXXXXXXXXXXXX
Sbjct: 121 ELSSVLEPGRTPKTDKVAIINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXSQPGFLPPAIP-PTFAAQGQAAGNKLVPFISYPGVAMWQF 240
           XXXXXXXXXXXXXXXXXXX +QP   P  +P P   +Q QA G+KLVPF +YPG AMWQF
Sbjct: 181 XXXXXXXXXXXXXXXXXXXKTQPQPQPCFLPNPQTLSQAQAPGSKLVPFTTYPGFAMWQF 226

Query: 241 MPPAAVDTSQDHVLRPPVA 259
           MPPAAVDTSQDHVLRPPVA
Sbjct: 241 MPPAAVDTSQDHVLRPPVA 226

[Close]

BLAST of Carg24824 vs. Swiss-Prot
Match: sp|Q9LTC7|BH034_ARATH (Transcription factor bHLH34 OS=Arabidopsis thaliana OX=3702 GN=BHLH34 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.5e-21
Identity = 103/213 (48.36%), Postives = 129/213 (60.56%), Query Frame = 0


Query: 49  EIEGSLFESDGLKEPGSKKRGADEECTVHLDLNFDKHTQLKSLKVRTETSCAS-SSKACR 108
           ++   + E +     G+ K   +EEC               S K R   SC+   +KACR
Sbjct: 126 QVFSGVVEINSSSSVGAVKEEFEEEC---------------SGKRRRTGSCSKPGTKACR 185

Query: 109 EKLRRDRLNDKFLELGAILEPGRPPKTDKAAILIDAVRIVAQLRGEAKMLKDSNTS-XXX 168
           EKLRR++LNDKF++L ++LEPGR PKTDK+AIL DA+R+V QLRGEA  L+++N     X
Sbjct: 186 EKLRREKLNDKFMDLSSVLEPGRTPKTDKSAILDDAIRVVNQLRGEAHELQETNQKLLEX 245

Query: 169 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPGFLPPAIPPTFAAQGQAAGNKLV 228
           XXXXXXXXXXXXXXXXXXXXXXXXXXXX        PGF+P   P  F +   A      
Sbjct: 246 XXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSMVVPSPGFMPSQHPAAFHSHKMAVA---Y 305

Query: 229 PFISY-PGVAMWQFMPPAAVDTSQDHVLRPPVA 259
           P+  Y P + MW  +PPA  DTS+D    PPVA
Sbjct: 306 PYGYYPPNMPMWSPLPPADRDTSRDLKNLPPVA 320

[Close]

BLAST of Carg24824 vs. Swiss-Prot
Match: sp|Q8L467|BH104_ARATH (Transcription factor bHLH104 OS=Arabidopsis thaliana OX=3702 GN=BHLH104 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.4e-19
Identity = 92/191 (48.17%), Postives = 117/191 (61.26%), Query Frame = 0


Query: 69  GADEECTVHLDLNFDKHTQLKSLKVRT-ETSCASSSKACREKLRRDRLNDKFLELGAILE 128
           GA +E   HLD +  +       + RT   S    +KACRE+LRR++LN++F++L ++LE
Sbjct: 105 GAVKEEQEHLDDDCSRK------RARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLE 164

Query: 129 PGRPPKTDKAAILIDAVRIVAQLRGEAKMLKDSNTSXXXXXXXXXXXXXXXXXXXXXXXX 188
           PGR PKTDK AIL DA+RI+ QLR EA  L+++N             XXXXXXXXXXXXX
Sbjct: 165 PGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEXXXXXXXXXXXXX 224

Query: 189 XXXXXXXXXXXXXSQPGFLPPAIPPTFAAQGQAAGNKLVPFISYPGVAMWQFMPPAAVDT 248
           XXXXXXXXXXXXX       P IP  F        NK+  + SY  + MW +MP +  DT
Sbjct: 225 XXXXXXXXXXXXXXPSSGFIPHIPAAF------NHNKMAVYPSYGYMPMWHYMPQSVRDT 283

Query: 249 SQDHVLRPPVA 259
           S+D  LRPP A
Sbjct: 285 SRDQELRPPAA 283

[Close]

BLAST of Carg24824 vs. Swiss-Prot
Match: sp|Q8W2F2|BH011_ARATH (Transcription factor bHLH11 OS=Arabidopsis thaliana OX=3702 GN=BHLH11 PE=2 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 2.6e-05
Identity = 28/50 (56.00%), Postives = 38/50 (76.00%), Query Frame = 0


Query: 91  LKVRTETSCASSSKACREKLRRDRLNDKFLELGAILEPGRPPKTDKAAIL 141
           ++V+ E  C  S KA REKLRRD+L ++FLELG  L+P R PK+DKA++L
Sbjct: 38  VEVKKEAVC--SQKAEREKLRRDKLKEQFLELGNALDPNR-PKSDKASVL 84

[Close]

BLAST of Carg24824 vs. TrEMBL
Match: tr|A0A2P5C4F5|A0A2P5C4F5_9ROSA (Basic helix-loop-helix transcription factor OS=Trema orientalis OX=63057 GN=TorBHLH43 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.6e-73
Identity = 194/260 (74.62%), Postives = 211/260 (81.15%), Query Frame = 0


Query: 1   MVSPETTNWLFDYALMDDIPVADANFSAPTAGFSWSMPTLNASSNVSTEIEGSLFESDGL 60
           MVSPE TNWLFDY L+DDIPV D NF   ++GFSW + TLN SS+VS EI+GSL +++GL
Sbjct: 152 MVSPENTNWLFDYGLIDDIPVPDGNFPVSSSGFSWPVQTLNGSSSVSVEIDGSLGDTEGL 211

Query: 61  KEPGSKKRGADEECTVHLDLNFDKHTQLKSLKVRTETSCASSSKACREKLRRDRLNDKFL 120
           KE GSKKR                        VR+E+  ASS+KACREK RRDRLNDKF+
Sbjct: 212 KESGSKKR------------------------VRSESRNASSTKACREKQRRDRLNDKFV 271

Query: 121 ELGAILEPGRPPKTDKAAILIDAVRIVAQLRGEAKMLKDSNTSXXXXXXXXXXXXXXXXX 180
           ELG+ILEPGRPPKTDKAAILIDAVR+V QLRGEA+ LKDSN SXXXXXXXXXXXXXXXXX
Sbjct: 272 ELGSILEPGRPPKTDKAAILIDAVRMVNQLRGEAQKLKDSNLSXXXXXXXXXXXXXXXXX 331

Query: 181 XXXXXXXXXXXXXXXXXXXXSQPGFL--PPAIPPTFAAQGQAAGNKLVPFISYPGVAMWQ 240
           XXXXXXXXXXXXXXXXXXXX+QPGFL  PPAIP  FAAQGQA GNKLVPFI YPGVAMWQ
Sbjct: 332 XXXXXXXXXXXXXXXXXXXXAQPGFLPPPPAIPAAFAAQGQAPGNKLVPFIGYPGVAMWQ 387

Query: 241 FMPPAAVDTSQDHVLRPPVA 259
           FMPPAAVDTSQDHVLRPPVA
Sbjct: 392 FMPPAAVDTSQDHVLRPPVA 387

[Close]

BLAST of Carg24824 vs. TrEMBL
Match: tr|A0A2I4H8D9|A0A2I4H8D9_9ROSI (transcription factor ILR3-like OS=Juglans regia OX=51240 GN=LOC109014401 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.0e-70
Identity = 189/260 (72.69%), Postives = 203/260 (78.08%), Query Frame = 0


Query: 1   MVSPETTNWLFDYALMDDIPVADANFSAPTAGFSWSMPTLNASSNVSTEIEGSLFESDGL 60
           MVSPE TNWL+DY L+DDIPV D NFSA   GFSW    LN S NVS EI+GSL +SDG+
Sbjct: 1   MVSPENTNWLYDYDLIDDIPVPDGNFSASNPGFSWPAQALNGSPNVSVEIDGSLGDSDGI 60

Query: 61  KEPGSKKRGADEECTVHLDLNFDKHTQLKSLKVRTETSCASSSKACREKLRRDRLNDKFL 120
           K+ G KKRG  E C                        CASSSKA REKLRRDRLNDKF+
Sbjct: 61  KDCGPKKRGRSELC------------------------CASSSKASREKLRRDRLNDKFV 120

Query: 121 ELGAILEPGRPPKTDKAAILIDAVRIVAQLRGEAKMLKDSNTSXXXXXXXXXXXXXXXXX 180
           ELG+I+EPGRPPKTDKAAILIDAVR+V QLRGEA+ LKD+N  XXXXXXXXXXXXXXXXX
Sbjct: 121 ELGSIMEPGRPPKTDKAAILIDAVRMVTQLRGEAQKLKDTNXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXSQPGFL--PPAIPPTFAAQGQAAGNKLVPFISYPGVAMWQ 240
           XXXXXXXXXXXXXXXXXXXX  PG+L  PP IP  FAAQGQA G+KLVPFISYPGVAMWQ
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXPGYLPAPPPIPAAFAAQGQAPGSKLVPFISYPGVAMWQ 236

Query: 241 FMPPAAVDTSQDHVLRPPVA 259
           FMPPAAVDTSQDHVLRPPVA
Sbjct: 241 FMPPAAVDTSQDHVLRPPVA 236

[Close]

BLAST of Carg24824 vs. TrEMBL
Match: tr|A0A2C9UE48|A0A2C9UE48_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G077000 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 2.9e-70
Identity = 189/260 (72.69%), Postives = 199/260 (76.54%), Query Frame = 0


Query: 1   MVSPETTNWLFDYALMDDIPVADANFSAPTAGFSWSMPTLNASSNVSTEIEGSLFESDGL 60
           MVSPE TNWL +Y L+DDIPV DANFS P  GFSW +   N  SNV  EI+G   +SD  
Sbjct: 1   MVSPENTNWLMEYGLIDDIPVPDANFSVPVTGFSWPVQNTNGPSNVGLEIDGPFGDSDAQ 60

Query: 61  KEPGSKKRGADEECTVHLDLNFDKHTQLKSLKVRTETSCASSSKACREKLRRDRLNDKFL 120
           KE   KKRG  E C+                        ASSSKACREKLRRDRLNDKFL
Sbjct: 61  KESSCKKRGRSELCS------------------------ASSSKACREKLRRDRLNDKFL 120

Query: 121 ELGAILEPGRPPKTDKAAILIDAVRIVAQLRGEAKMLKDSNTSXXXXXXXXXXXXXXXXX 180
           ELG+ILEPGRPPKTDKAAILIDAVR+V QLRGEA+ LKDSN+ XXXXXXXXXXXXXXXXX
Sbjct: 121 ELGSILEPGRPPKTDKAAILIDAVRMVTQLRGEAQKLKDSNSXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXSQPGFL--PPAIPPTFAAQGQAAGNKLVPFISYPGVAMWQ 240
           XXXXXXXXXXXXXXXXXXXX  P FL  PPAIP TFA QGQA GNKLVPFISYPGVAMWQ
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXPSFLPPPPAIPATFATQGQAPGNKLVPFISYPGVAMWQ 236

Query: 241 FMPPAAVDTSQDHVLRPPVA 259
           FMPPAAVDTSQDHVLRPPVA
Sbjct: 241 FMPPAAVDTSQDHVLRPPVA 236

[Close]

BLAST of Carg24824 vs. TrEMBL
Match: tr|A0A1S3TLH2|A0A1S3TLH2_VIGRR (transcription factor ILR3-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106756637 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.4e-69
Identity = 187/260 (71.92%), Postives = 204/260 (78.46%), Query Frame = 0


Query: 1   MVSPETTNWLFDYALMDDIPVADANFSAPTAGFSWSMPTLNASSNVSTEIEGSLFESDGL 60
           MVS E TNWLFDY L+DDIP  DA+F+ P++GF+W    LNA+SNV  E++GSL +SDGL
Sbjct: 1   MVSRENTNWLFDYGLIDDIPAVDASFTVPSSGFTWPPNALNATSNVGVEVDGSLVDSDGL 60

Query: 61  KEPGSKKRGADEECTVHLDLNFDKHTQLKSLKVRTETSCASSSKACREKLRRDRLNDKFL 120
           KE GSKKR                        VR+ET  ASSSKACREKLRRD+LNDKF+
Sbjct: 61  KESGSKKR------------------------VRSETYAASSSKACREKLRRDKLNDKFV 120

Query: 121 ELGAILEPGRPPKTDKAAILIDAVRIVAQLRGEAKMLKDSNTSXXXXXXXXXXXXXXXXX 180
           ELG+ILEPGRP KTDKAAILIDAVR+V  LRGEA+ LKD    XXXXXXXXXXXXXXXXX
Sbjct: 121 ELGSILEPGRPTKTDKAAILIDAVRMVTHLRGEAQKLKDXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXSQPGFLPP--AIPPTFAAQGQAAGNKLVPFISYPGVAMWQ 240
           XXXXXXXXXXXXXXXXXXXX  P F+PP  AIP  FAAQGQA GNKLVPFISYPGVAMWQ
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXPSFMPPPAAIPAAFAAQGQAHGNKLVPFISYPGVAMWQ 236

Query: 241 FMPPAAVDTSQDHVLRPPVA 259
           FMPPAAVDTSQDHVLRPPVA
Sbjct: 241 FMPPAAVDTSQDHVLRPPVA 236

[Close]

BLAST of Carg24824 vs. TrEMBL
Match: tr|A0A2N9J3J5|A0A2N9J3J5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59087 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.9e-69
Identity = 191/262 (72.90%), Postives = 206/262 (78.63%), Query Frame = 0


Query: 1   MVSPE-TTNWLFDYALMDDIPVADANFSAPTAGFSWSMPTLNASSNVSTEIEGSLFESDG 60
           MVSPE  TNWLFDY L+DDIPV  ANFS P  GF+W +  LN SS+VS EI+GSL +SDG
Sbjct: 1   MVSPENNTNWLFDYDLIDDIPVPGANFSVPNPGFTWPVQALNGSSSVSVEIDGSLGDSDG 60

Query: 61  LKEPGSKKRGADEECTVHLDLNFDKHTQLKSLKVRTETSCASSSKACREKLRRDRLNDKF 120
           +KE G KKRG                        R+ET CASSSKA REKLRRDRLNDKF
Sbjct: 61  VKESGPKKRG------------------------RSETCCASSSKASREKLRRDRLNDKF 120

Query: 121 LELGAILEPGRPPKTDKAAILIDAVRIVAQLRGEAKMLKDSNTSXXXXXXXXXXXXXXXX 180
           +ELG+ILEPGRPPKTDKAAILIDAVR+V+QLRGEA+ LKDSN  XXXXXXXXXXXXXXXX
Sbjct: 121 VELGSILEPGRPPKTDKAAILIDAVRMVSQLRGEAQKLKDSNXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXSQPGFLPPAIPPTFA---AQGQAAGNKLVPFISYPGVAM 240
           XXXXXXXXXXXXXXXXXXXXX  PGF+PP  PP  +   AQGQA GNKLVPFI YPGVAM
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXPGFMPP--PPAISAAFAQGQAPGNKLVPFIGYPGVAM 236

Query: 241 WQFMPPAAVDTSQDHVLRPPVA 259
           WQFMPPAAVDTSQDHVLRPPVA
Sbjct: 241 WQFMPPAAVDTSQDHVLRPPVA 236

The following BLAST results are available for this feature:

BLAST of Carg24824 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932170.1	1.1e-97	90.70	transcription factor ILR3-like [Cucurbita moschata]	[more]
XP_022985260.1	4.2e-97	90.31	transcription factor ILR3-like isoform X1 [Cucurbita maxima]	[more]
XP_022985261.1	4.6e-96	89.92	transcription factor ILR3-like isoform X2 [Cucurbita maxima]	[more]
XP_023520448.1	5.7e-94	88.76	transcription factor ILR3 [Cucurbita pepo subsp. pepo]	[more]
XP_022154955.1	2.8e-85	82.56	transcription factor ILR3 [Momordica charantia]	[more]

BLAST of Carg24824 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G54680.1	2.3e-52	61.22	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G51070.2	5.8e-32	56.81	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G23210.1	4.1e-22	48.36	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G14410.1	1.3e-20	48.17	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G36060.1	1.4e-06	56.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of Carg24824 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FH37\|ILR3_ARATH	4.1e-51	61.22	Transcription factor ILR3 OS=Arabidopsis thaliana OX=3702 GN=ILR3 PE=1 SV=1	[more]
sp\|Q9C682\|BH115_ARATH	1.4e-38	53.67	Transcription factor bHLH115 OS=Arabidopsis thaliana OX=3702 GN=BHLH115 PE=1 SV=...	[more]
sp\|Q9LTC7\|BH034_ARATH	7.5e-21	48.36	Transcription factor bHLH34 OS=Arabidopsis thaliana OX=3702 GN=BHLH34 PE=2 SV=1	[more]
sp\|Q8L467\|BH104_ARATH	2.4e-19	48.17	Transcription factor bHLH104 OS=Arabidopsis thaliana OX=3702 GN=BHLH104 PE=1 SV=...	[more]
sp\|Q8W2F2\|BH011_ARATH	2.6e-05	56.00	Transcription factor bHLH11 OS=Arabidopsis thaliana OX=3702 GN=BHLH11 PE=2 SV=2	[more]

BLAST of Carg24824 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2P5C4F5\|A0A2P5C4F5_9ROSA	1.6e-73	74.62	Basic helix-loop-helix transcription factor OS=Trema orientalis OX=63057 GN=TorB...	[more]
tr\|A0A2I4H8D9\|A0A2I4H8D9_9ROSI	1.0e-70	72.69	transcription factor ILR3-like OS=Juglans regia OX=51240 GN=LOC109014401 PE=4 SV...	[more]
tr\|A0A2C9UE48\|A0A2C9UE48_MANES	2.9e-70	72.69	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G077000 PE=4 SV=...	[more]
tr\|A0A1S3TLH2\|A0A1S3TLH2_VIGRR	1.4e-69	71.92	transcription factor ILR3-like OS=Vigna radiata var. radiata OX=3916 GN=LOC10675...	[more]
tr\|A0A2N9J3J5\|A0A2N9J3J5_FAGSY	1.9e-69	72.90	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59087 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036638	HLH_DNA-bd_sf
IPR011598	bHLH_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24824-RA	Carg24824-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 147..202
None	No IPR available	PANTHER	PTHR23042	CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS	coord: 86..258
None	No IPR available	PANTHER	PTHR23042	CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS	coord: 21..75
None	No IPR available	PANTHER	PTHR23042:SF78	SUBFAMILY NOT NAMED	coord: 21..75 coord: 86..258
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 105..156 e-value: 2.7E-7 score: 40.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 103..150 e-value: 2.5E-8 score: 33.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 99..150 score: 12.417
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	CDD	cd00083	HLH	coord: 102..151 e-value: 9.55729E-7 score: 43.7419
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	G3DSA:4.10.280.10		coord: 102..175 e-value: 4.6E-11 score: 44.7
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 104..174

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24824	Cla005272	Watermelon (97103) v1	carwmB0791
Carg24824	ClCG10G005740	Watermelon (Charleston Gray)	carwcgB0766
Carg24824	CmaCh04G009380	Cucurbita maxima (Rimu)	carcmaB1100
Carg24824	CmaCh16G008460	Cucurbita maxima (Rimu)	carcmaB1099
Carg24824	CmoCh04G010080	Cucurbita moschata (Rifu)	carcmoB1070
Carg24824	CmoCh16G009160	Cucurbita moschata (Rifu)	carcmoB1069
Carg24824	Lsi05G006290	Bottle gourd (USVL1VR-Ls)	carlsiB729
Carg24824	Cp4.1LG01g08120	Cucurbita pepo (Zucchini)	carcpeB1110
Carg24824	Cp4.1LG00g00150	Cucurbita pepo (Zucchini)	carcpeB1109
Carg24824	Cla97C10G189930	Watermelon (97103) v2	carwmbB0829
Carg24824	Bhi11G000522	Wax gourd	carwgoB0927

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg24824	Carg00051	Silver-seed gourd	carcarB567

The following block(s) are covering this gene:


Gene	Organism	Block
Carg24824	Cucumber (Gy14) v2	carcgybB0784
Carg24824	Cucumber (Gy14) v1	carcgyB0904
Carg24824	Wild cucumber (PI 183967)	carcpiB0828
Carg24824	Cucumber (Chinese Long) v2	carcuB0809
Carg24824	Cucumber (Chinese Long) v3	carcucB0832
Carg24824	Melon (DHL92) v3.5.1	carmeB0789
Carg24824	Melon (DHL92) v3.6.1	carmedB0801