CmoCh04G000070 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGGAGCCCCCGACGACATCAACGGAGCCACAGCGTCAGCATCAGCATGAGCAGCAGCAACATCCCCACCATCTCCTACATTTACCCCTAATCCACGGTGGCGCATCCACGGGCACCACTGCCCGAATCAACACTGCAGTAGCAACCTCACCCTCGACAGTAATAGTCCGAGAGTACCGCAAAGGGAACTGGAGTCTCCAAGAGACGATGATTCTGATAACCGCGAAAAAGCTGGACGAGGAACGGCGGAACAAGGCGGAACAAGGAACGGCCAGAAAGGGCAGCGAGCTGCGGTGGAAGTGGGTGGAAAACTACTGCTGGAGCCAGGGGTGCGAGCGGAGCCAAAATCAGTGCAACGACAAGTGGGATAACCTACTCCGCGACTACAAAAAAGTCCGGGAGCATGAATCCCGCGCGTGTGATCAATCCCAAATTCCGTCTTACTGGAAAATGGAAAAGCATGAGCGTAAGGACAACAATCTTCCTTCTAACATGGCCTTTGAGGTGTATCAGGCCTTAAACGACGTGGTTCAGAGGAAGCTCAGAGGTGTGTCTGTTGCTGTTGTTGCTGGTCCTCCGCCTTCTCCTTCCCCCGCCGAGGGCGAGGCTGCGGCGGGGACTAGTTCCCCGGCGGCTTCAGGTGAGTGTGTTTTTGTTTGTGTGTGTGTGTGTGTGGGGTACTATTAAATTTGATTTTATTATATTATTTTCGGCCTGGACCTTTCATTTTCGGCCTGGTTCGAGTTAATAGTGTGGGTCAAAGTTGCAGGGTTTGACTCTGCCACAATTTTGAATAGGACCCTCCTTCCTCCTTTTCGTTTCGTTATTCGCTTTCTAATCCTCTACGGACACCTCTACCATCTGCAGATGGGGCCTCCAAATCTTATCCCTCCGATTACGTTGCGAATTTAATATAGTGGGATTAATTTTGCAATCATGATTAATACAAATCTAAGCATGCAATCCCATAATTAAATATTTATTGTTTACTTACTAATTTTGTCTTCTTCTTCTTTTTAAAATCTCTCTATTTTACAGCTTCTTTAAAATTTATGGATGGATATATTTACCAAATGCAGATTCGTGAGCTTTATGTGTGTGTGTGTATATATATATATATATTTGAAATTTGATTGTGTGGGCATATGTGTATATATATATACAGAGTCGTCGTCGTCGTCGTCGTCAGGGAGGGAGTGGGGGCAGAAGAAAGAGAAGAGGGAGAGAAAGAGGAGAAGAGTGGGAAGAAGCATTGAGAGAAGCGCGTCGGCGGTGGCTCAAACGCTGCGGACCTGCGAGGAGCAGAGGGAGATCCGACACCAACAACTGATGGAGCTTAAGAAACGGCGCCTTCAAATCCAAGAAGCCCGCAACCACATTCAGGGTCAAGGCATCGCCGACCTCGTGGCCGCGGTTGCCAACCTCTCCGGTACATGTGTACATATATATATATATATATATATATATATAAATAATAAAAAGAAAGGAATTAGGGTTTATGTTGACTTGGTGGGGGGATGTTGTGAGTGTAGGCATAAACAATAGAAGAAGAAGAAGAAGAAGATCAGAAGAGTATGAATGTTTATACAGTGGAGAAGAGGTGAGAATGTTGAAAGAACAAAACGAGGCAATGCAGGCTGAGCTTTCGAGCGTCAAGACTGAGCTTTCTCAACTCCGAGACCAAATGCCCTCTCTCGTGCGAACCATGATGCACAATGTGATGCACAACATCCCTCCTCCTCCTCCTCCTTCCACGGTACTCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCCCTATGCATCCATCCATATTATTCTAAATAATATATATAATATTGACTATATGTTCTGTACATCTTTGTTTGTATAGGACCCAGGTGGAGATGCTTACAAATAA ATGTCGGAGCCCCCGACGACATCAACGGAGCCACAGCGTCAGCATCAGCATGAGCAGCAGCAACATCCCCACCATCTCCTACATTTACCCCTAATCCACGGTGGCGCATCCACGGGCACCACTGCCCGAATCAACACTGCAGTAGCAACCTCACCCTCGACAGTAATAGTCCGAGAGTACCGCAAAGGGAACTGGAGTCTCCAAGAGACGATGATTCTGATAACCGCGAAAAAGCTGGACGAGGAACGGCGGAACAAGGCGGAACAAGGAACGGCCAGAAAGGGCAGCGAGCTGCGGTGGAAGTGGGTGGAAAACTACTGCTGGAGCCAGGGGTGCGAGCGGAGCCAAAATCAGTGCAACGACAAGTGGGATAACCTACTCCGCGACTACAAAAAAGTCCGGGAGCATGAATCCCGCGCGTGTGATCAATCCCAAATTCCGTCTTACTGGAAAATGGAAAAGCATGAGCGTAAGGACAACAATCTTCCTTCTAACATGGCCTTTGAGGTGTATCAGGCCTTAAACGACGTGGTTCAGAGGAAGCTCAGAGGTGTGTCTGTTGCTGTTGTTGCTGGTCCTCCGCCTTCTCCTTCCCCCGCCGAGGGCGAGGCTGCGGCGGGGACTAGTTCCCCGGCGGCTTCAGAGTCGTCGTCGTCGTCGTCGTCAGGGAGGGAGTGGGGGCAGAAGAAAGAGAAGAGGGAGAGAAAGAGGAGAAGAGTGGGAAGAAGCATTGAGAGAAGCGCGTCGGCGGTGGCTCAAACGCTGCGGACCTGCGAGGAGCAGAGGGAGATCCGACACCAACAACTGATGGAGCTTAAGAAACGGCGCCTTCAAATCCAAGAAGCCCGCAACCACATTCAGGGTCAAGGCATCGCCGACCTCGTGGCCGCGGTTGCCAACCTCTCCGGCATAAACAATAGAAGAAGAAGAAGAAGAAGATCAGAAGAGTATGAATGTTTATACAGTGGAGAAGAGGTGAGAATGTTGAAAGAACAAAACGAGGCAATGCAGGCTGAGCTTTCGAGCGTCAAGACTGAGCTTTCTCAACTCCGAGACCAAATGCCCTCTCTCGTGCGAACCATGATGCACAATGTGATGCACAACATCCCTCCTCCTCCTCCTCCTTCCACGGACCCAGGTGGAGATGCTTACAAATAA ATGTCGGAGCCCCCGACGACATCAACGGAGCCACAGCGTCAGCATCAGCATGAGCAGCAGCAACATCCCCACCATCTCCTACATTTACCCCTAATCCACGGTGGCGCATCCACGGGCACCACTGCCCGAATCAACACTGCAGTAGCAACCTCACCCTCGACAGTAATAGTCCGAGAGTACCGCAAAGGGAACTGGAGTCTCCAAGAGACGATGATTCTGATAACCGCGAAAAAGCTGGACGAGGAACGGCGGAACAAGGCGGAACAAGGAACGGCCAGAAAGGGCAGCGAGCTGCGGTGGAAGTGGGTGGAAAACTACTGCTGGAGCCAGGGGTGCGAGCGGAGCCAAAATCAGTGCAACGACAAGTGGGATAACCTACTCCGCGACTACAAAAAAGTCCGGGAGCATGAATCCCGCGCGTGTGATCAATCCCAAATTCCGTCTTACTGGAAAATGGAAAAGCATGAGCGTAAGGACAACAATCTTCCTTCTAACATGGCCTTTGAGGTGTATCAGGCCTTAAACGACGTGGTTCAGAGGAAGCTCAGAGGTGTGTCTGTTGCTGTTGTTGCTGGTCCTCCGCCTTCTCCTTCCCCCGCCGAGGGCGAGGCTGCGGCGGGGACTAGTTCCCCGGCGGCTTCAGAGTCGTCGTCGTCGTCGTCGTCAGGGAGGGAGTGGGGGCAGAAGAAAGAGAAGAGGGAGAGAAAGAGGAGAAGAGTGGGAAGAAGCATTGAGAGAAGCGCGTCGGCGGTGGCTCAAACGCTGCGGACCTGCGAGGAGCAGAGGGAGATCCGACACCAACAACTGATGGAGCTTAAGAAACGGCGCCTTCAAATCCAAGAAGCCCGCAACCACATTCAGGGTCAAGGCATCGCCGACCTCGTGGCCGCGGTTGCCAACCTCTCCGGCATAAACAATAGAAGAAGAAGAAGAAGAAGATCAGAAGAGTATGAATGTTTATACAGTGGAGAAGAGGTGAGAATGTTGAAAGAACAAAACGAGGCAATGCAGGCTGAGCTTTCGAGCGTCAAGACTGAGCTTTCTCAACTCCGAGACCAAATGCCCTCTCTCGTGCGAACCATGATGCACAATGTGATGCACAACATCCCTCCTCCTCCTCCTCCTTCCACGGACCCAGGTGGAGATGCTTACAAATAA
BLAST of CmoCh04G000070 vs. TrEMBL
Match: A0A0A0KME8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G261720 PE=4 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 4.4e-101 Identity = 222/324 (68.52%), Postives = 242/324 (74.69%), Query Frame = 1
BLAST of CmoCh04G000070 vs. TrEMBL
Match: A0A067KQ45_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04860 PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 1.9e-64 Identity = 158/321 (49.22%), Postives = 200/321 (62.31%), Query Frame = 1
BLAST of CmoCh04G000070 vs. TrEMBL
Match: K7N4B1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G184500 PE=4 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 3.3e-64 Identity = 156/330 (47.27%), Postives = 203/330 (61.52%), Query Frame = 1
BLAST of CmoCh04G000070 vs. TrEMBL
Match: V7BD78_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G100500g PE=4 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 3.6e-63 Identity = 168/360 (46.67%), Postives = 212/360 (58.89%), Query Frame = 1
BLAST of CmoCh04G000070 vs. TrEMBL
Match: B9S7A3_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_0775080 PE=4 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 6.2e-63 Identity = 160/319 (50.16%), Postives = 207/319 (64.89%), Query Frame = 1
BLAST of CmoCh04G000070 vs. TAIR10
Match: AT1G31310.1 (AT1G31310.1 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 160.6 bits (405), Expect = 1.9e-39 Identity = 93/197 (47.21%), Postives = 119/197 (60.41%), Query Frame = 1
BLAST of CmoCh04G000070 vs. TAIR10
Match: AT2G35640.1 (AT2G35640.1 Homeodomain-like superfamily protein) HSP 1 Score: 156.8 bits (395), Expect = 2.8e-38 Identity = 72/139 (51.80%), Postives = 101/139 (72.66%), Query Frame = 1
BLAST of CmoCh04G000070 vs. TAIR10
Match: AT2G33550.1 (AT2G33550.1 Homeodomain-like superfamily protein) HSP 1 Score: 52.0 bits (123), Expect = 9.6e-07 Identity = 77/289 (26.64%), Postives = 118/289 (40.83%), Query Frame = 1
BLAST of CmoCh04G000070 vs. NCBI nr
Match: gi|659114054|ref|XP_008456886.1| (PREDICTED: uncharacterized protein LOC103496697 [Cucumis melo]) HSP 1 Score: 479.2 bits (1232), Expect = 6.9e-132 Identity = 288/408 (70.59%), Postives = 316/408 (77.45%), Query Frame = 1
BLAST of CmoCh04G000070 vs. NCBI nr
Match: gi|778701746|ref|XP_004140413.2| (PREDICTED: trihelix transcription factor PTL-like [Cucumis sativus]) HSP 1 Score: 474.9 bits (1221), Expect = 1.3e-130 Identity = 287/412 (69.66%), Postives = 314/412 (76.21%), Query Frame = 1
BLAST of CmoCh04G000070 vs. NCBI nr
Match: gi|700195606|gb|KGN50783.1| (hypothetical protein Csa_5G261720 [Cucumis sativus]) HSP 1 Score: 376.3 bits (965), Expect = 6.3e-101 Identity = 222/324 (68.52%), Postives = 242/324 (74.69%), Query Frame = 1
BLAST of CmoCh04G000070 vs. NCBI nr
Match: gi|1009152822|ref|XP_015894304.1| (PREDICTED: trihelix transcription factor ASR3-like [Ziziphus jujuba]) HSP 1 Score: 267.7 bits (683), Expect = 3.1e-68 Identity = 168/327 (51.38%), Postives = 214/327 (65.44%), Query Frame = 1
BLAST of CmoCh04G000070 vs. NCBI nr
Match: gi|802598104|ref|XP_012072429.1| (PREDICTED: uncharacterized protein LOC105634212 [Jatropha curcas]) HSP 1 Score: 254.6 bits (649), Expect = 2.8e-64 Identity = 158/321 (49.22%), Postives = 200/321 (62.31%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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