Cp4.1LG01g06400 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAGGGTAAAGTTGTAATTAAATTTTAGGATAAATATACAAAAATAAAAATGATAGAGAAGTTGTAACTTACAAAAAATGATAAGGAAAAAGGAAAAAATAAGCAATAAAATTAATAGTATTAAGACAGAGAGAGAGGGAGAGAAAAGGAAGGAAAAACTTTCACTTCTTTTCTCTCTACTTCTCTCTTTTTCCTCTATCCATTCCTGAGTCTCTGAGATGCCAAAGCCATGTCGGAGCCTCCGACGACATCAACGGAGCCACAGCGTCAGCATCAGCATCAGTATGAGCAGCAGCAACATCCCCACCATCTCCTACATTTACCCCTAATCCACGGTGGCGCATCCACGGGCACCACTGCCCGAATCAACACTGCAGCAGCAACCTCACCCTCGACAGTAATAGTCCGAGAGTACCGCAAAGGGAACTGGAATCTCCAAGAGACGATGATTCTGATAACCGCGAAAAAGCTGGACGAGGAACGGCGGAACAAGGCGGAGCAAGGAACGGCCAGAAAGGGCAGCGAGCTGCGGTGGAAGTGGGTGGAAAACTACTGCTGGAGCCAGGGGTGCCAGCGGAGCCAAAATCAGTGCAACGACAAGTGGGATAACCTACTCCGCGACTACAAAAAAGTCCGGGAGCACGAATCCCGCGCGTGCGATCAATCCCAAATTCCGTCTTACTGGAAAATGGAAAAGCATGAGCGTAAGGACAACAATCTTCCTTCTAACATGGCCTTTGAGGTGTATCAGGCCTTAAACGACGTGGTTCAGAGGAAGCTCAGAGGTGTGTCTGTTGCTGTTGTTGCTGGTCCTCCGCCTCCTCCTTCCCCCGCCGAGGGCGAGGCTGCGGCGGGGACTAGTTCCCCGGCGGCTTCAGGTGAGTGTGTTTTTGTTTGTGTGTGGGTGTGTGTGGGGTACTATTAAATTTGATTTTATTATATTATTTTCGGCCCGGACCTTTCGTTTTCGGCCTGGTTCGAGTTAATAGTGTGGGTCAAAGTTGCAGGGTTTGACTCTGCCACAATTTTGAATAGGACCCTCCTTCCTCCTTTTCATTTCGTTATTCGCTTTCTAATCCTCTACGGACGCCTCTACCATCTGCAGATGGGGCCTCCAAATCTTATCCCTCCGATTACGTTGGGTGATACAGTCATCCATATGAATTTAATATAAGTGGGATTAATTTTGCAATCATGATTAATACAAATCTAAGCATGCAATCCCATAAGTAAATATTTATTGTTTACTTACTAATTTTGTCTTCTTCTTCTTTTTAAAATCTCTCTTATTTTACCGCTTCTTTAAAATTTATGGATGGATATATTTACCAAATGCAGATTCTTGAGCTTTATGTATATATATATATTTGAAATTTGATTGTGTGGGCATATGTGTATATATATATACAGAGTCGTCGTCGTCGTCGTCGGGGCAGAAGAAAGAGAAGAGGGAGAGAAAGAGGAGAAGAGTGGGAAGAAGCATTGAGAGAAGCGCGTCGGCGGTGGCTCAAACGCTGCGGACCTGCGAGGAGCAGAGGGAGATCCGACACCAACAACTGATGGAGCTTAAGAAACGGCGCCTTCAAATCCAAGAAGCCCGCAACCACATTCAGGGTCAAGGCATCGCCGACCTCGTGGCCGCGGTTGCCAACCTCTCCGGTACATGTGCATATGTATATATATATATATATATAAATAAGAAAAAGAAAGGAATTAGGGTTTATGTTGACTTGGTGGGGGGATGTTTTGAGTGTAGGCATAAACAATAGAAGAAGAAGAAGAAGATCAGAAGAGTATGAATGTTTATACAGTGGAGAAGAGGTGAGAATGTTGAAAGAACAAAATGAGGCAATGCAGGCTGAGCTTTCGAGCGTCAAGACTGAGCTTTCTCAACTCCGAGACCAAATGCCCTCTCTCGTGCGAACCATGATGCACAATGCGATGCACAACATCCCTCCTCCTCCTCCTCCTCCTTCCATGGTACTCTCTCCCTCTCCCTCTCCCTCCCTATGCATCCATCCATATTATTCTAAATAATATATATAATATTGACTATATGTTCTGTTCATCTTTGTTTGTATAGGACCCAGGTGGAGATGGTTACAAATAATTGGTTATTAATTCATTCACAAAATTACTACAATTCATCATTGTTTCATATCATATGGAGTTTAATGATTTTGTAAAACTTGTTTAATATAATTTATTTTTATTATTATTCCCCATACACAACCACAACCAACGCTGAGCATCCAAAATGAAATGCCAGAGTACCACGGACTTAAATATGAGAGAGATCACACTGTGTTTTTGCAGACTCTGTCAGAACGACTGGTCAAACCTTGTGAATTCCATTTTCACCACATTTACCCCTGCCCCCTCCCCACCATGTTCTGCCCTCCACCTGACACTTCCGCCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNCAAACAAACACCATAACCTTTTTCAGGGCTTATTATTTTCCCTTTCTCAAATGACCCTTTTACCCCTTCTCCCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTCTCACCGCCCATTCGAACGCTTTCGTTTCTTTTCCTCCCAATTTATCGTTTCCCAAAATATCGGCAAAACGGGGTAATGGTAATGAGTAATTGACATTTACCTTTCGTGAGTCAAACGTGTTGCCTTGCCACGTCAACTACCGTCACCCTTTGACACCACCTTTTTTTTTTTTTTTTTTTTAAGTAAAAAAAGTTTATAATATCCCTTTTTTATATTTGTTTTTATATGTAAGCTTATTTATCCAAGTCATAGTGATCAAATCTAGAGGTCTTTTTTTCTTAGCTTTCAGAAGTCTGTTGTCGCTTGTACCTTCATTCAGTTTACTAACATTTGTATTAAAAATATCTACCTACCAGCGTAATCCACTACTACTGTTTTCACGGATGAATCTCTCTCTTTTAATAAGTCACAGAAGTAGTGCAGAAGCAGTGTAGTGCATAATACAATTAAATTACACATAGTGCAATATATATTTACTAAAAAACTAGCCCAAATAGTTTCACTGTTGTCCCTTTTTCGGTCATTCTCCATATTATTATTGTGATTTTTTTCTTTATTCAAACTAGTGAAATTGGGACGTCCTTTTACTGTATTCACTAGAAATTGTACGAAGATTGAAATAAAAATATATAGTTATGTGCATAAGATCTCACCATCCAAACTTTCTCGAGAAGACTCTATTCGAGTCATTATGTTAAATAAAAATGAACTAGGGTTAGTATATTTTAACCATGTTATGAGAAATATTCAAATTTAATGAATTTTGGGTCGTTTACTGCGGGGCTACAATTGTTT AAAAGGGTAAAGTTGTAATTAAATTTTAGGATAAATATACAAAAATAAAAATGATAGAGAAGTTGTAACTTACAAAAAATGATAAGGAAAAAGGAAAAAATAAGCAATAAAATTAATAGTATTAAGACAGAGAGAGAGGGAGAGAAAAGGAAGGAAAAACTTTCACTTCTTTTCTCTCTACTTCTCTCTTTTTCCTCTATCCATTCCTGAGTCTCTGAGATGCCAAAGCCATGTCGGAGCCTCCGACGACATCAACGGAGCCACAGCGTCAGCATCAGCATCAGTATGAGCAGCAGCAACATCCCCACCATCTCCTACATTTACCCCTAATCCACGGTGGCGCATCCACGGGCACCACTGCCCGAATCAACACTGCAGCAGCAACCTCACCCTCGACAGTAATAGTCCGAGAGTACCGCAAAGGGAACTGGAATCTCCAAGAGACGATGATTCTGATAACCGCGAAAAAGCTGGACGAGGAACGGCGGAACAAGGCGGAGCAAGGAACGGCCAGAAAGGGCAGCGAGCTGCGGTGGAAGTGGGTGGAAAACTACTGCTGGAGCCAGGGGTGCCAGCGGAGCCAAAATCAGTGCAACGACAAGTGGGATAACCTACTCCGCGACTACAAAAAAGTCCGGGAGCACGAATCCCGCGCGTGCGATCAATCCCAAATTCCGTCTTACTGGAAAATGGAAAAGCATGAGCGTAAGGACAACAATCTTCCTTCTAACATGGCCTTTGAGGTGTATCAGGCCTTAAACGACGTGGTTCAGAGGAAGCTCAGAGGTGTGTCTGTTGCTGTTGTTGCTGGTCCTCCGCCTCCTCCTTCCCCCGCCGAGGGCGAGGCTGCGGCGGGGACTAGTTCCCCGGCGGCTTCAGAGTCGTCGTCGTCGTCGTCGGGGCAGAAGAAAGAGAAGAGGGAGAGAAAGAGGAGAAGAGTGGGAAGAAGCATTGAGAGAAGCGCGTCGGCGGTGGCTCAAACGCTGCGGACCTGCGAGGAGCAGAGGGAGATCCGACACCAACAACTGATGGAGCTTAAGAAACGGCGCCTTCAAATCCAAGAAGCCCGCAACCACATTCAGGGTCAAGGCATCGCCGACCTCGTGGCCGCGGTTGCCAACCTCTCCGGCATAAACAATAGAAGAAGAAGAAGAAGATCAGAAGAGTATGAATGTTTATACAGTGGAGAAGAGGTGAGAATGTTGAAAGAACAAAATGAGGCAATGCAGGCTGAGCTTTCGAGCGTCAAGACTGAGCTTTCTCAACTCCGAGACCAAATGCCCTCTCTCGTGCGAACCATGATGCACAATGCGATGCACAACATCCCTCCTCCTCCTCCTCCTCCTTCCATGGACCCAGGTGGAGATGGTTACAAATAATTGGTTATTAATTCATTCACAAAATTACTACAATTCATCATTGTTTCATATCATATGGAGTTTAATGATTTTGTAAAACTTGTTTAATATAATTTATTTTTATTATTATTCCCCATACACAACCACAACCAACGCTGAGCATCCAAAATGAAATGCCAGAGTACCACGGACTTAAATATGAGAGAGATCACACTGTGTTTTTGCAGACTCTGTCAGAACGACTGGTCAAACCTTGTGAATTCCATTTTCACCACATTTACCCCTGCCCCCTCCCCACCATGTTCTGCCCTCCACCTGACACTTCCGCCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNCAAACAAACACCATAACCTTTTTCAGGGCTTATTATTTTCCCTTTCTCAAATGACCCTTTTACCCCTTCTCCCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTCTCACCGCCCATTCGAACGCTTTCGTTTCTTTTCCTCCCAATTTATCGTTTCCCAAAATATCGGCAAAACGGGGTAATGGTAATGAGTAATTGACATTTACCTTTCGTGAGTCAAACGTGTTGCCTTGCCACGTCAACTACCGTCACCCTTTGACACCACCTTTTTTTTTTTTTTTTTTTTAAGTAAAAAAAGTTTATAATATCCCTTTTTTATATTTGTTTTTATATGTAAGCTTATTTATCCAAGTCATAGTGATCAAATCTAGAGGTCTTTTTTTCTTAGCTTTCAGAAGTCTGTTGTCGCTTGTACCTTCATTCAGTTTACTAACATTTGTATTAAAAATATCTACCTACCAGCGTAATCCACTACTACTGTTTTCACGGATGAATCTCTCTCTTTTAATAAGTCACAGAAGTAGTGCAGAAGCAGTGTAGTGCATAATACAATTAAATTACACATAGTGCAATATATATTTACTAAAAAACTAGCCCAAATAGTTTCACTGTTGTCCCTTTTTCGGTCATTCTCCATATTATTATTGTGATTTTTTTCTTTATTCAAACTAGTGAAATTGGGACGTCCTTTTACTGTATTCACTAGAAATTGTACGAAGATTGAAATAAAAATATATAGTTATGTGCATAAGATCTCACCATCCAAACTTTCTCGAGAAGACTCTATTCGAGTCATTATGTTAAATAAAAATGAACTAGGGTTAGTATATTTTAACCATGTTATGAGAAATATTCAAATTTAATGAATTTTGGGTCGTTTACTGCGGGGCTACAATTGTTT ATGTCGGAGCCTCCGACGACATCAACGGAGCCACAGCGTCAGCATCAGCATCAGTATGAGCAGCAGCAACATCCCCACCATCTCCTACATTTACCCCTAATCCACGGTGGCGCATCCACGGGCACCACTGCCCGAATCAACACTGCAGCAGCAACCTCACCCTCGACAGTAATAGTCCGAGAGTACCGCAAAGGGAACTGGAATCTCCAAGAGACGATGATTCTGATAACCGCGAAAAAGCTGGACGAGGAACGGCGGAACAAGGCGGAGCAAGGAACGGCCAGAAAGGGCAGCGAGCTGCGGTGGAAGTGGGTGGAAAACTACTGCTGGAGCCAGGGGTGCCAGCGGAGCCAAAATCAGTGCAACGACAAGTGGGATAACCTACTCCGCGACTACAAAAAAGTCCGGGAGCACGAATCCCGCGCGTGCGATCAATCCCAAATTCCGTCTTACTGGAAAATGGAAAAGCATGAGCGTAAGGACAACAATCTTCCTTCTAACATGGCCTTTGAGGTGTATCAGGCCTTAAACGACGTGGTTCAGAGGAAGCTCAGAGGTGTGTCTGTTGCTGTTGTTGCTGGTCCTCCGCCTCCTCCTTCCCCCGCCGAGGGCGAGGCTGCGGCGGGGACTAGTTCCCCGGCGGCTTCAGAGTCGTCGTCGTCGTCGTCGGGGCAGAAGAAAGAGAAGAGGGAGAGAAAGAGGAGAAGAGTGGGAAGAAGCATTGAGAGAAGCGCGTCGGCGGTGGCTCAAACGCTGCGGACCTGCGAGGAGCAGAGGGAGATCCGACACCAACAACTGATGGAGCTTAAGAAACGGCGCCTTCAAATCCAAGAAGCCCGCAACCACATTCAGGGTCAAGGCATCGCCGACCTCGTGGCCGCGGTTGCCAACCTCTCCGGCATAAACAATAGAAGAAGAAGAAGAAGATCAGAAGAGTATGAATGTTTATACAGTGGAGAAGAGGTGAGAATGTTGAAAGAACAAAATGAGGCAATGCAGGCTGAGCTTTCGAGCGTCAAGACTGAGCTTTCTCAACTCCGAGACCAAATGCCCTCTCTCGTGCGAACCATGATGCACAATGCGATGCACAACATCCCTCCTCCTCCTCCTCCTCCTTCCATGGACCCAGGTGGAGATGGTTACAAATAA MSEPPTTSTEPQRQHQHQYEQQQHPHHLLHLPLIHGGASTGTTARINTAAATSPSTVIVREYRKGNWNLQETMILITAKKLDEERRNKAEQGTARKGSELRWKWVENYCWSQGCQRSQNQCNDKWDNLLRDYKKVREHESRACDQSQIPSYWKMEKHERKDNNLPSNMAFEVYQALNDVVQRKLRGVSVAVVAGPPPPPSPAEGEAAAGTSSPAASESSSSSSGQKKEKRERKRRRVGRSIERSASAVAQTLRTCEEQREIRHQQLMELKKRRLQIQEARNHIQGQGIADLVAAVANLSGINNRRRRRRSEEYECLYSGEEVRMLKEQNEAMQAELSSVKTELSQLRDQMPSLVRTMMHNAMHNIPPPPPPPSMDPGGDGYK
BLAST of Cp4.1LG01g06400 vs. Swiss-Prot
Match: ASR3_ARATH (Trihelix transcription factor ASR3 OS=Arabidopsis thaliana GN=ASR3 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 6.8e-07 Identity = 61/211 (28.91%), Postives = 90/211 (42.65%), Query Frame = 1
BLAST of Cp4.1LG01g06400 vs. TrEMBL
Match: A0A0A0KME8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G261720 PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 5.7e-101 Identity = 222/318 (69.81%), Postives = 240/318 (75.47%), Query Frame = 1
BLAST of Cp4.1LG01g06400 vs. TrEMBL
Match: K7N4B1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G184500 PE=4 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 1.3e-65 Identity = 157/326 (48.16%), Postives = 201/326 (61.66%), Query Frame = 1
BLAST of Cp4.1LG01g06400 vs. TrEMBL
Match: A0A067KQ45_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04860 PE=4 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 7.2e-64 Identity = 158/323 (48.92%), Postives = 200/323 (61.92%), Query Frame = 1
BLAST of Cp4.1LG01g06400 vs. TrEMBL
Match: V7BD78_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G100500g PE=4 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 7.2e-64 Identity = 170/362 (46.96%), Postives = 213/362 (58.84%), Query Frame = 1
BLAST of Cp4.1LG01g06400 vs. TrEMBL
Match: A0A0B2P041_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_000552 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 2.1e-63 Identity = 154/323 (47.68%), Postives = 198/323 (61.30%), Query Frame = 1
BLAST of Cp4.1LG01g06400 vs. TAIR10
Match: AT1G31310.1 (AT1G31310.1 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 162.2 bits (409), Expect = 6.5e-40 Identity = 94/199 (47.24%), Postives = 119/199 (59.80%), Query Frame = 1
BLAST of Cp4.1LG01g06400 vs. TAIR10
Match: AT2G35640.1 (AT2G35640.1 Homeodomain-like superfamily protein) HSP 1 Score: 156.8 bits (395), Expect = 2.7e-38 Identity = 73/142 (51.41%), Postives = 101/142 (71.13%), Query Frame = 1
BLAST of Cp4.1LG01g06400 vs. TAIR10
Match: AT2G33550.1 (AT2G33550.1 Homeodomain-like superfamily protein) HSP 1 Score: 56.6 bits (135), Expect = 3.9e-08 Identity = 61/211 (28.91%), Postives = 90/211 (42.65%), Query Frame = 1
BLAST of Cp4.1LG01g06400 vs. NCBI nr
Match: gi|659114054|ref|XP_008456886.1| (PREDICTED: uncharacterized protein LOC103496697 [Cucumis melo]) HSP 1 Score: 480.3 bits (1235), Expect = 3.1e-132 Identity = 286/402 (71.14%), Postives = 311/402 (77.36%), Query Frame = 1
BLAST of Cp4.1LG01g06400 vs. NCBI nr
Match: gi|778701746|ref|XP_004140413.2| (PREDICTED: trihelix transcription factor PTL-like [Cucumis sativus]) HSP 1 Score: 477.2 bits (1227), Expect = 2.6e-131 Identity = 283/401 (70.57%), Postives = 307/401 (76.56%), Query Frame = 1
BLAST of Cp4.1LG01g06400 vs. NCBI nr
Match: gi|700195606|gb|KGN50783.1| (hypothetical protein Csa_5G261720 [Cucumis sativus]) HSP 1 Score: 375.9 bits (964), Expect = 8.1e-101 Identity = 222/318 (69.81%), Postives = 240/318 (75.47%), Query Frame = 1
BLAST of Cp4.1LG01g06400 vs. NCBI nr
Match: gi|1009152822|ref|XP_015894304.1| (PREDICTED: trihelix transcription factor ASR3-like [Ziziphus jujuba]) HSP 1 Score: 267.3 bits (682), Expect = 4.1e-68 Identity = 166/323 (51.39%), Postives = 208/323 (64.40%), Query Frame = 1
BLAST of Cp4.1LG01g06400 vs. NCBI nr
Match: gi|571568693|ref|XP_006606274.1| (PREDICTED: trihelix transcription factor ASR3-like [Glycine max]) HSP 1 Score: 258.5 bits (659), Expect = 1.9e-65 Identity = 157/326 (48.16%), Postives = 201/326 (61.66%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|