CmoCh04G000070 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G000070
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	(Sh4 homologue protein) (Shattering protein)
Location	Cmo_Chr04 : 36569 .. 38481 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGAGCCCCCGACGACATCAACGGAGCCACAGCGTCAGCATCAGCATGAGCAGCAGCAACATCCCCACCATCTCCTACATTTACCCCTAATCCACGGTGGCGCATCCACGGGCACCACTGCCCGAATCAACACTGCAGTAGCAACCTCACCCTCGACAGTAATAGTCCGAGAGTACCGCAAAGGGAACTGGAGTCTCCAAGAGACGATGATTCTGATAACCGCGAAAAAGCTGGACGAGGAACGGCGGAACAAGGCGGAACAAGGAACGGCCAGAAAGGGCAGCGAGCTGCGGTGGAAGTGGGTGGAAAACTACTGCTGGAGCCAGGGGTGCGAGCGGAGCCAAAATCAGTGCAACGACAAGTGGGATAACCTACTCCGCGACTACAAAAAAGTCCGGGAGCATGAATCCCGCGCGTGTGATCAATCCCAAATTCCGTCTTACTGGAAAATGGAAAAGCATGAGCGTAAGGACAACAATCTTCCTTCTAACATGGCCTTTGAGGTGTATCAGGCCTTAAACGACGTGGTTCAGAGGAAGCTCAGAGGTGTGTCTGTTGCTGTTGTTGCTGGTCCTCCGCCTTCTCCTTCCCCCGCCGAGGGCGAGGCTGCGGCGGGGACTAGTTCCCCGGCGGCTTCAGGTGAGTGTGTTTTTGTTTGTGTGTGTGTGTGTGTGGGGTACTATTAAATTTGATTTTATTATATTATTTTCGGCCTGGACCTTTCATTTTCGGCCTGGTTCGAGTTAATAGTGTGGGTCAAAGTTGCAGGGTTTGACTCTGCCACAATTTTGAATAGGACCCTCCTTCCTCCTTTTCGTTTCGTTATTCGCTTTCTAATCCTCTACGGACACCTCTACCATCTGCAGATGGGGCCTCCAAATCTTATCCCTCCGATTACGTTGCGAATTTAATATAGTGGGATTAATTTTGCAATCATGATTAATACAAATCTAAGCATGCAATCCCATAATTAAATATTTATTGTTTACTTACTAATTTTGTCTTCTTCTTCTTTTTAAAATCTCTCTATTTTACAGCTTCTTTAAAATTTATGGATGGATATATTTACCAAATGCAGATTCGTGAGCTTTATGTGTGTGTGTGTATATATATATATATATTTGAAATTTGATTGTGTGGGCATATGTGTATATATATATACAGAGTCGTCGTCGTCGTCGTCGTCAGGGAGGGAGTGGGGGCAGAAGAAAGAGAAGAGGGAGAGAAAGAGGAGAAGAGTGGGAAGAAGCATTGAGAGAAGCGCGTCGGCGGTGGCTCAAACGCTGCGGACCTGCGAGGAGCAGAGGGAGATCCGACACCAACAACTGATGGAGCTTAAGAAACGGCGCCTTCAAATCCAAGAAGCCCGCAACCACATTCAGGGTCAAGGCATCGCCGACCTCGTGGCCGCGGTTGCCAACCTCTCCGGTACATGTGTACATATATATATATATATATATATATATATAAATAATAAAAAGAAAGGAATTAGGGTTTATGTTGACTTGGTGGGGGGATGTTGTGAGTGTAGGCATAAACAATAGAAGAAGAAGAAGAAGAAGATCAGAAGAGTATGAATGTTTATACAGTGGAGAAGAGGTGAGAATGTTGAAAGAACAAAACGAGGCAATGCAGGCTGAGCTTTCGAGCGTCAAGACTGAGCTTTCTCAACTCCGAGACCAAATGCCCTCTCTCGTGCGAACCATGATGCACAATGTGATGCACAACATCCCTCCTCCTCCTCCTCCTTCCACGGTACTCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCCCTATGCATCCATCCATATTATTCTAAATAATATATATAATATTGACTATATGTTCTGTACATCTTTGTTTGTATAGGACCCAGGTGGAGATGCTTACAAATAA

mRNA sequence

ATGTCGGAGCCCCCGACGACATCAACGGAGCCACAGCGTCAGCATCAGCATGAGCAGCAGCAACATCCCCACCATCTCCTACATTTACCCCTAATCCACGGTGGCGCATCCACGGGCACCACTGCCCGAATCAACACTGCAGTAGCAACCTCACCCTCGACAGTAATAGTCCGAGAGTACCGCAAAGGGAACTGGAGTCTCCAAGAGACGATGATTCTGATAACCGCGAAAAAGCTGGACGAGGAACGGCGGAACAAGGCGGAACAAGGAACGGCCAGAAAGGGCAGCGAGCTGCGGTGGAAGTGGGTGGAAAACTACTGCTGGAGCCAGGGGTGCGAGCGGAGCCAAAATCAGTGCAACGACAAGTGGGATAACCTACTCCGCGACTACAAAAAAGTCCGGGAGCATGAATCCCGCGCGTGTGATCAATCCCAAATTCCGTCTTACTGGAAAATGGAAAAGCATGAGCGTAAGGACAACAATCTTCCTTCTAACATGGCCTTTGAGGTGTATCAGGCCTTAAACGACGTGGTTCAGAGGAAGCTCAGAGGTGTGTCTGTTGCTGTTGTTGCTGGTCCTCCGCCTTCTCCTTCCCCCGCCGAGGGCGAGGCTGCGGCGGGGACTAGTTCCCCGGCGGCTTCAGAGTCGTCGTCGTCGTCGTCGTCAGGGAGGGAGTGGGGGCAGAAGAAAGAGAAGAGGGAGAGAAAGAGGAGAAGAGTGGGAAGAAGCATTGAGAGAAGCGCGTCGGCGGTGGCTCAAACGCTGCGGACCTGCGAGGAGCAGAGGGAGATCCGACACCAACAACTGATGGAGCTTAAGAAACGGCGCCTTCAAATCCAAGAAGCCCGCAACCACATTCAGGGTCAAGGCATCGCCGACCTCGTGGCCGCGGTTGCCAACCTCTCCGGCATAAACAATAGAAGAAGAAGAAGAAGAAGATCAGAAGAGTATGAATGTTTATACAGTGGAGAAGAGGTGAGAATGTTGAAAGAACAAAACGAGGCAATGCAGGCTGAGCTTTCGAGCGTCAAGACTGAGCTTTCTCAACTCCGAGACCAAATGCCCTCTCTCGTGCGAACCATGATGCACAATGTGATGCACAACATCCCTCCTCCTCCTCCTCCTTCCACGGACCCAGGTGGAGATGCTTACAAATAA

Coding sequence (CDS)

ATGTCGGAGCCCCCGACGACATCAACGGAGCCACAGCGTCAGCATCAGCATGAGCAGCAGCAACATCCCCACCATCTCCTACATTTACCCCTAATCCACGGTGGCGCATCCACGGGCACCACTGCCCGAATCAACACTGCAGTAGCAACCTCACCCTCGACAGTAATAGTCCGAGAGTACCGCAAAGGGAACTGGAGTCTCCAAGAGACGATGATTCTGATAACCGCGAAAAAGCTGGACGAGGAACGGCGGAACAAGGCGGAACAAGGAACGGCCAGAAAGGGCAGCGAGCTGCGGTGGAAGTGGGTGGAAAACTACTGCTGGAGCCAGGGGTGCGAGCGGAGCCAAAATCAGTGCAACGACAAGTGGGATAACCTACTCCGCGACTACAAAAAAGTCCGGGAGCATGAATCCCGCGCGTGTGATCAATCCCAAATTCCGTCTTACTGGAAAATGGAAAAGCATGAGCGTAAGGACAACAATCTTCCTTCTAACATGGCCTTTGAGGTGTATCAGGCCTTAAACGACGTGGTTCAGAGGAAGCTCAGAGGTGTGTCTGTTGCTGTTGTTGCTGGTCCTCCGCCTTCTCCTTCCCCCGCCGAGGGCGAGGCTGCGGCGGGGACTAGTTCCCCGGCGGCTTCAGAGTCGTCGTCGTCGTCGTCGTCAGGGAGGGAGTGGGGGCAGAAGAAAGAGAAGAGGGAGAGAAAGAGGAGAAGAGTGGGAAGAAGCATTGAGAGAAGCGCGTCGGCGGTGGCTCAAACGCTGCGGACCTGCGAGGAGCAGAGGGAGATCCGACACCAACAACTGATGGAGCTTAAGAAACGGCGCCTTCAAATCCAAGAAGCCCGCAACCACATTCAGGGTCAAGGCATCGCCGACCTCGTGGCCGCGGTTGCCAACCTCTCCGGCATAAACAATAGAAGAAGAAGAAGAAGAAGATCAGAAGAGTATGAATGTTTATACAGTGGAGAAGAGGTGAGAATGTTGAAAGAACAAAACGAGGCAATGCAGGCTGAGCTTTCGAGCGTCAAGACTGAGCTTTCTCAACTCCGAGACCAAATGCCCTCTCTCGTGCGAACCATGATGCACAATGTGATGCACAACATCCCTCCTCCTCCTCCTCCTTCCACGGACCCAGGTGGAGATGCTTACAAATAA

Homology

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BLAST of CmoCh04G000070 vs. TrEMBL
Match: A0A0A0KME8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G261720 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 4.4e-101
Identity = 222/324 (68.52%), Postives = 242/324 (74.69%), Query Frame = 1


Query: 1   MSEPPTTSTEPQRQHQHEQQQHPHHLLHLPLIHGGASTGTTARINTAVATSPSTVIVREY 60
           MS+PPTTS+EP   H      H  HL  LP+IH GA+ GT  R+NTA ATS S VIVREY
Sbjct: 1   MSDPPTTSSEPPHHH------HQQHLPRLPVIHSGATGGT--RMNTAAATSSSAVIVREY 60

Query: 61  RKGNWSLQETMILITAKKLDEERRNKAEQG------TARKGSELRWKWVENYCWSQGCER 120
           RKGNW+LQETMILITAKKLD+ERRNKA  G       ARKG ELRWKWVENYCWS GC+R
Sbjct: 61  RKGNWTLQETMILITAKKLDDERRNKANLGPSTVDPAARKGGELRWKWVENYCWSHGCQR 120

Query: 121 SQNQCNDKWDNLLRDYKKVREHESRACDQSQIPSYWKMEKHERKDNNLPSNMAFEVYQAL 180
           SQNQCNDKWDNLLRDYKKVRE+ESRACDQ QIPSYWKMEKHERKD NLPSNMAFEVYQAL
Sbjct: 121 SQNQCNDKWDNLLRDYKKVREYESRACDQ-QIPSYWKMEKHERKDKNLPSNMAFEVYQAL 180

Query: 181 NDVVQRKL---------RGVSVAVVAGPPPS---PSPAEGEAAAGTSSPAASESSSSSSS 240
           NDVVQRK           G+ +  +  PPPS   P P        T+SP  SE   SSSS
Sbjct: 181 NDVVQRKFSQKPSNSSNTGILLLPLPAPPPSALLPPP------TATNSPQLSE---SSSS 240

Query: 241 GREWGQKKEKRERKRRR----VGRSIERSASAVAQTLRTCEEQREIRHQQLMELKKRRLQ 300
           G E  +KKEK E KRR+    +GR IERS SA+ QTL +CEEQREIRHQQLMEL+KRRLQ
Sbjct: 241 GTESSEKKEKVEAKRRKMEDNIGRRIERSVSALGQTLHSCEEQREIRHQQLMELRKRRLQ 300

Query: 301 IQEARNHIQGQGIADLVAAVANLS 303
           I+E RNHI  QGIADLVAAVANLS
Sbjct: 301 IEETRNHIHRQGIADLVAAVANLS 306

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BLAST of CmoCh04G000070 vs. TrEMBL
Match: A0A067KQ45_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04860 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.9e-64
Identity = 158/321 (49.22%), Postives = 200/321 (62.31%), Query Frame = 1


Query: 1   MSEPPTTSTEPQRQHQHEQQQHPHHLLHLPLIHGGASTGTTARINTAVATSPSTVIVREY 60
           MS+PPT+   P      + Q  P    HLPL+   A+T TT   +            REY
Sbjct: 1   MSQPPTSIPPPP-----QPQPQPQPPSHLPLLPFSATTTTTPTSSN-----------REY 60

Query: 61  RKGNWSLQETMILITAKKLDEERRNKAEQGTARKGSELRWKWVENYCWSQGCERSQNQCN 120
           RKGNW++QET+ LITAKKLD+ERR+K    +  K  ELRWKWVENYCW+ GC RSQNQCN
Sbjct: 61  RKGNWTIQETLTLITAKKLDDERRSKPTVPSTSKPGELRWKWVENYCWAHGCYRSQNQCN 120

Query: 121 DKWDNLLRDYKKVREHESRACDQSQIPSYWKMEKHERKDNNLPSNMAFEVYQALNDVVQR 180
           DKWDNLLRDYKKVRE++SR+      PSYW ME+H+RK  NLPSNM+ EV++ALN VVQR
Sbjct: 121 DKWDNLLRDYKKVREYQSRSDGSDSFPSYWTMERHQRKYYNLPSNMSLEVFEALNQVVQR 180

Query: 181 KLRGVS---------------VAVVAGPPPSP-SPAEGEAAAGTSSPAASESSSSS---S 240
           +   ++               V VVA  P SP +  E    A    PA SE S SS   S
Sbjct: 181 RYTNITQQNVVVSPQQQQQQQVTVVADVPVSPVTLREVVPEALMDRPALSEGSESSATES 240

Query: 241 SGREWGQKKEKRERKRRRVGRSIERSASAVAQTLRTCEEQREIRHQQLMELKKRRLQIQE 300
           S +      ++R  K   +G SI+ SAS +AQT+R CEE++E RHQ+LME ++RRLQ++E
Sbjct: 241 SDKHDSGGSKRRRMKNNNIGASIKHSASILAQTIRNCEEKKEKRHQELMEFEQRRLQLEE 300

Query: 301 ARNHIQGQGIADLVAAVANLS 303
            RN +  QG+A+L  AV NLS
Sbjct: 301 TRNEVNRQGMANLAMAVTNLS 305

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BLAST of CmoCh04G000070 vs. TrEMBL
Match: K7N4B1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G184500 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 3.3e-64
Identity = 156/330 (47.27%), Postives = 203/330 (61.52%), Query Frame = 1


Query: 22  HPHHLLHLPLIHGGASTGTTARINTAVATSPSTVIVREYRKGNWSLQETMILITAKKLDE 81
           H HH  H+PLI GGA+            +S ST + REYRKGNW++QET+ILITAKKLD+
Sbjct: 12  HHHHNHHVPLIQGGATA----------PSSSSTTLAREYRKGNWTIQETLILITAKKLDD 71

Query: 82  ERRNKAEQG------TARKGSELRWKWVENYCWSQGCERSQNQCNDKWDNLLRDYKKVRE 141
           ERR K          T R   ELRWKWVENYCWS GC RSQNQCNDKWDNLLRDYKKVR+
Sbjct: 72  ERRLKTPAACSTSTTTTRTSGELRWKWVENYCWSHGCLRSQNQCNDKWDNLLRDYKKVRD 131

Query: 142 HESRACD-----QSQIPSYWKMEKHERKDNNLPSNMAFEVYQALNDVVQRK--------L 201
           +ES++ D         PSYW + K +RK+ NLPSNM FEVYQ + DV+QRK         
Sbjct: 132 YESKSNDNDNNNNKHFPSYWTLNKQQRKEQNLPSNMVFEVYQTIADVLQRKQTQSQRQHQ 191

Query: 202 RGVSVAVVAGP------------PPSPSPAEGEAAAGTSSPAASESSSSSSS--GREWGQ 261
           + +++ +V               PP P P        +++P  SE S SS +    +   
Sbjct: 192 QPLAIPLVTSSPSPLQTLPPPPLPPPPPPPPPPPPVSSTTPVGSERSESSGTEHSEDDDD 251

Query: 262 KKEKRERKRRRVGRSIERSASAVAQTLRTCEEQREIRHQQLMELKKRRLQIQEARNHIQG 314
             E + RK + +G  I +SAS +A+ LR+CEE++E RH++++EL++RR+Q++EARN +  
Sbjct: 252 GSESKRRKVKNLGSRIMQSASVLARALRSCEEKKEKRHREMIELEQRRIQMEEARNEVHR 311

[Close]

BLAST of CmoCh04G000070 vs. TrEMBL
Match: V7BD78_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G100500g PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 3.6e-63
Identity = 168/360 (46.67%), Postives = 212/360 (58.89%), Query Frame = 1


Query: 1   MSEPPTTSTE--PQRQHQHEQQQHPHHLLHLPLIHGGASTGTTARINTAVATSPSTVIVR 60
           MS+P TT     P     H Q  H H L   PLI G           TA A S S+ + R
Sbjct: 1   MSDPSTTPLPHPPLLPEAHRQPLHHHPL---PLIQGA----------TAAAPSSSSSLAR 60

Query: 61  EYRKGNWSLQETMILITAKKLDEERRNKAEQ------------GTARKGSELRWKWVENY 120
           EYRKGNW++QET+ILITAKKLD+ERR K                +AR   ELRWKWVENY
Sbjct: 61  EYRKGNWTIQETLILITAKKLDDERRLKTPHDPTRPACSSTTSSSARTSGELRWKWVENY 120

Query: 121 CWSQGCERSQNQCNDKWDNLLRDYKKVREHESRACDQ--------SQIPSYWKMEKHERK 180
           CWS GC RSQNQCNDKWDNLLRDYKKVR++ES++  Q           PSYW + K +RK
Sbjct: 121 CWSHGCLRSQNQCNDKWDNLLRDYKKVRDYESKSQQQQHQQSHEIKHFPSYWTLNKQQRK 180

Query: 181 DNNLPSNMAFEVYQALNDVVQRKLR------------------GVSVAVVAGPPPSPSPA 240
           + NLPSNM +EVY A+ +V+QRK                     V++  V+ PPP P P 
Sbjct: 181 EQNLPSNMVYEVYHAITEVLQRKQTQPQLQSQTQTQRQPQQQPPVALITVSSPPPPPPP- 240

Query: 241 EGEAAAGTSSPAASESSSSSSSGREWGQKKEKRERKRRRV---GRSIERSASAVAQTLRT 300
                  +++PA SE S SS +        +  E KRR+V   G SI RSAS +A+ LR+
Sbjct: 241 ----PVSSTTPAVSERSESSGTEHSEDDADDGSESKRRKVKNLGSSIMRSASVLARALRS 300

Query: 301 CEEQREIRHQQLMELKKRRLQIQEARNHIQGQGIADLVAAVANLSG-----INNRRRRRR 313
           CEE++E RH++L+EL++RRLQ++EAR+ +  QGIA LVAAV NLSG     IN+ R  +R
Sbjct: 301 CEEKKEKRHRELIELEQRRLQMEEARDEVHRQGIATLVAAVTNLSGAIQSLINSERHGQR 342

[Close]

BLAST of CmoCh04G000070 vs. TrEMBL
Match: B9S7A3_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_0775080 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 6.2e-63
Identity = 160/319 (50.16%), Postives = 207/319 (64.89%), Query Frame = 1


Query: 1   MSEPPTTSTEPQRQHQHEQQQHPHHLLHLPLIHGGASTGTTARINTAVATSPSTVIVREY 60
           MSEPP    +P           P   LHLPL+     T TT    T +++S +    REY
Sbjct: 1   MSEPPPPLQQPPPL--------PPPPLHLPLLPFSTITTTT----TTISSSSN----REY 60

Query: 61  RKGNWSLQETMILITAKKLDEERRNKAEQ-GTARKGSELRWKWVENYCWSQGCERSQNQC 120
           RKGNW++QET+ LITAKKLD+ERR+K     +  K  ELRWKWVENYCW+ GC RSQNQC
Sbjct: 61  RKGNWTIQETLTLITAKKLDDERRSKPSTVASTSKPGELRWKWVENYCWAHGCFRSQNQC 120

Query: 121 NDKWDNLLRDYKKVREHESRA--CDQSQIPSYWKMEKHERKDNNLPSNMAFEVYQALNDV 180
           NDKWDNLLRD+KKVR++++R+   D S  PSYW ME+H+RK  NLPSNM+ EV++ALN+V
Sbjct: 121 NDKWDNLLRDFKKVRDYQARSNDSDSSSFPSYWTMERHQRKFYNLPSNMSLEVFEALNEV 180

Query: 181 VQRKL--------RGVSVAVVAGPPPSPSPAEGEAAAGT------SSPAASESSSSSSSG 240
           VQR+         +   V+ VA PPP P  +  EA   T      + P  SESS++ SS 
Sbjct: 181 VQRRYNTNITTTPQQQHVSAVA-PPPVPVTSVREAMPETVVMDAPAVPERSESSATESSD 240

Query: 241 REWGQKKEKRERKRRRVGRSIERSASAVAQTLRTCEEQREIRHQQLMELKKRRLQIQEAR 300
           +  G    KR RK R +G SI+RSAS +AQT+R CEE++  RHQ+L+E ++RRLQ++E R
Sbjct: 241 KHDGNTGPKR-RKVRNIGASIKRSASILAQTIRNCEEKKHKRHQELLEFEQRRLQLEETR 300

Query: 301 NHIQGQGIADLVAAVANLS 303
           N +  QG+ DLV AV  LS
Sbjct: 301 NEVNKQGMTDLVLAVTKLS 301

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BLAST of CmoCh04G000070 vs. TAIR10
Match: AT1G31310.1 (AT1G31310.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 160.6 bits (405), Expect = 1.9e-39
Identity = 93/197 (47.21%), Postives = 119/197 (60.41%), Query Frame = 1


Query: 51  SPSTVIVREYRKGNWSLQETMILITAKKLDEERRNKAEQGT----------ARKGSELRW 110
           S   V++REYRKGNW+L ETM+LI AK++D+ERR +   G           + K +ELRW
Sbjct: 5   SGGLVMMREYRKGNWTLNETMVLIEAKRMDDERRMRRSIGLPPPEQQQDIRSNKPAELRW 64

Query: 111 KWVENYCWSQGCERSQNQCNDKWDNLLRDYKKVREHESRACDQS--------------QI 170
           KW+E+YCW +GC RSQNQCNDKWDNL+RDYKKVRE+E R  + S              + 
Sbjct: 65  KWIEDYCWRKGCMRSQNQCNDKWDNLMRDYKKVREYERRRVESSITAGESSSSSAPAGET 124

Query: 171 PSYWKMEKHERKDNNLPSNMAFEVYQALNDVVQRKLRGVSVAVVAGPPPSPSPAEGEAAA 224
            SYWKMEK ERK+ +LPSNM  + YQAL +VV+ K    S AV A              A
Sbjct: 125 ASYWKMEKSERKERSLPSNMLPQTYQALFEVVESKTLPSSTAVTA------------VTA 184

[Close]

BLAST of CmoCh04G000070 vs. TAIR10
Match: AT2G35640.1 (AT2G35640.1 Homeodomain-like superfamily protein)

HSP 1 Score: 156.8 bits (395), Expect = 2.8e-38
Identity = 72/139 (51.80%), Postives = 101/139 (72.66%), Query Frame = 1


Query: 50  TSPSTVIVREYRKGNWSLQETMILITAKKLDEERR---NKAEQGTARKGSELRWKWVENY 109
           +S   +++RE RKGNW++ ET++LI AKK+D++RR   ++ +     K +ELRWKW+E Y
Sbjct: 7   SSGEQIVMRECRKGNWTVSETLVLIEAKKMDDQRRVRRSEKQPEGRNKPAELRWKWIEEY 66

Query: 110 CWSQGCERSQNQCNDKWDNLLRDYKKVREHESRACDQS----QIPSYWKMEKHERKDNNL 169
           CW +GC R+QNQCNDKWDNL+RDYKK+RE+E    + S       SYWKM+K ERK+ NL
Sbjct: 67  CWRRGCYRNQNQCNDKWDNLMRDYKKIREYERSRVESSFNTVTSSSYWKMDKTERKEKNL 126

Query: 170 PSNMAFEVYQALNDVVQRK 182
           PSNM  ++Y  L+++V RK
Sbjct: 127 PSNMLPQIYDVLSELVDRK 145

[Close]

BLAST of CmoCh04G000070 vs. TAIR10
Match: AT2G33550.1 (AT2G33550.1 Homeodomain-like superfamily protein)

HSP 1 Score: 52.0 bits (123), Expect = 9.6e-07
Identity = 77/289 (26.64%), Postives = 118/289 (40.83%), Query Frame = 1


Query: 57  VREYRKGNWSLQETMILITAKKLDEERRNKAEQGTARKGS---ELRWKWVENYCWSQGCE 116
           V+  R   W+ QE ++LI  K++ E R  +        GS   E +W  V +YC   G  
Sbjct: 31  VKTARLPRWTRQEILVLIQGKRVAENRVRRGRAAGMALGSGQMEPKWASVSSYCKRHGVN 90

Query: 117 RSQNQCNDKWDNLLRDYKKVREHESRACDQSQIPSYWKMEKHERKDNNLPSNMAFEVYQA 176
           R   QC  +W NL  DYKK++E ES+  ++++  SYW M    R++  LP     EVY  
Sbjct: 91  RGPVQCRKRWSNLAGDYKKIKEWESQIKEETE--SYWVMRNDVRREKKLPGFFDKEVYDI 150

Query: 177 LNDVVQRKLRGVSVAVVAGPPPSPSPAEGEAAAGTSSPAASESSSSSSSGREWGQK---- 236
           ++  V              PP  P  + G A      PA+ E   S    RE  +K    
Sbjct: 151 VDGGVI-------------PPAVPVLSLGLA------PASDEGLLSDLDRRESPEKLNST 210

Query: 237 -----------KEKRERKRRRVGRSIERSASAV-AQTLRTCEEQREIRHQQLMELKKRRL 296
                      KEK+E      GR  E+   A   +   T +E+R+ +     E  K   
Sbjct: 211 PVAKSVTDVIDKEKQEACVADQGRVKEKQPEAANVEGGSTSQEERKRKRTSFGE--KEEE 270

Query: 297 QIQEARNHIQGQGI------ADLVAAVANLSGINNRRRRRRRSEEYECL 321
           + +     +Q Q I        L+AA   +  +N +  R +R +  + L
Sbjct: 271 EEEGETKKMQNQLIEILERNGQLLAAQLEVQNLNLKLDREQRKDHGDSL 296

[Close]

BLAST of CmoCh04G000070 vs. NCBI nr
Match: gi|659114054|ref|XP_008456886.1| (PREDICTED: uncharacterized protein LOC103496697 [Cucumis melo])

HSP 1 Score: 479.2 bits (1232), Expect = 6.9e-132
Identity = 288/408 (70.59%), Postives = 316/408 (77.45%), Query Frame = 1


Query: 1   MSEPPTTSTEPQRQHQHEQQQHPHHLLHLPLIHGGASTGTTARINTAVATSPSTVIVREY 60
           MS+PPTTS+EP   HQ +QQ    HL  LP+IHGGAS  T  R+NTA ATS S VIVREY
Sbjct: 1   MSDPPTTSSEPPH-HQQQQQ----HLPRLPVIHGGASGAT--RMNTAAATSSSAVIVREY 60

Query: 61  RKGNWSLQETMILITAKKLDEERRNKAEQG------TARKGSELRWKWVENYCWSQGCER 120
           RKGNW+LQETMILITAKKLD+ERRNKA  G       ARKG ELRWKWVENYCWS GC+R
Sbjct: 61  RKGNWTLQETMILITAKKLDDERRNKANLGPSTVDPAARKGGELRWKWVENYCWSHGCQR 120

Query: 121 SQNQCNDKWDNLLRDYKKVREHESRACDQSQIPSYWKMEKHERKDNNLPSNMAFEVYQAL 180
           SQNQCNDKWDNLLRDYKKVRE+ESRACDQ QIPSYWKMEKHERKD NLPSNMAFEVYQAL
Sbjct: 121 SQNQCNDKWDNLLRDYKKVREYESRACDQ-QIPSYWKMEKHERKDKNLPSNMAFEVYQAL 180

Query: 181 NDVVQRKL---------RGVSVAVVAGPPPS---PSPAEGEAAAGTSSPAASESSSSSSS 240
           NDVVQRK           G+ +  +  PPPS   P P        T+SP  SE   SSSS
Sbjct: 181 NDVVQRKFSQKPSNSSNTGILLLPLPAPPPSTLLPPP------TATNSPQLSE---SSSS 240

Query: 241 GREWGQKKEKRERKRRR----VGRSIERSASAVAQTLRTCEEQREIRHQQLMELKKRRLQ 300
           G E  +KKEK E KRR+    +GR IERS SA+ QTL +CEEQREIRHQQLMEL+KRRLQ
Sbjct: 241 GTESSEKKEKMEAKRRKMEDNIGRRIERSVSALGQTLHSCEEQREIRHQQLMELRKRRLQ 300

Query: 301 IQEARNHIQGQGIADLVAAVANLS-GINNRRRRRRRSEEYE-CLYSGEEVRMLKEQNEAM 360
           I+E RNHI  QGIADLVAAVANLS GI+N   RR RSE YE CLYSGEEVR+LKEQNEAM
Sbjct: 301 IEETRNHIHRQGIADLVAAVANLSAGIDN--NRRGRSEGYESCLYSGEEVRILKEQNEAM 360

Query: 361 QAELSSVKTELSQLRDQMPSLVRTMMHNVMHNIPPPPPPST---DPGG 382
           QAEL +VK ELSQLRDQMPSL++TMMH+++HNIPPPPPPST   DP G
Sbjct: 361 QAELMNVKNELSQLRDQMPSLMQTMMHSMIHNIPPPPPPSTSSMDPSG 389

[Close]

BLAST of CmoCh04G000070 vs. NCBI nr
Match: gi|778701746|ref|XP_004140413.2| (PREDICTED: trihelix transcription factor PTL-like [Cucumis sativus])

HSP 1 Score: 474.9 bits (1221), Expect = 1.3e-130
Identity = 287/412 (69.66%), Postives = 314/412 (76.21%), Query Frame = 1


Query: 1   MSEPPTTSTEPQRQHQHEQQQHPHHLLHLPLIHGGASTGTTARINTAVATSPSTVIVREY 60
           MS+PPTTS+EP   H      H  HL  LP+IH GA+ GT  R+NTA ATS S VIVREY
Sbjct: 1   MSDPPTTSSEPPHHH------HQQHLPRLPVIHSGATGGT--RMNTAAATSSSAVIVREY 60

Query: 61  RKGNWSLQETMILITAKKLDEERRNKAEQG------TARKGSELRWKWVENYCWSQGCER 120
           RKGNW+LQETMILITAKKLD+ERRNKA  G       ARKG ELRWKWVENYCWS GC+R
Sbjct: 61  RKGNWTLQETMILITAKKLDDERRNKANLGPSTVDPAARKGGELRWKWVENYCWSHGCQR 120

Query: 121 SQNQCNDKWDNLLRDYKKVREHESRACDQSQIPSYWKMEKHERKDNNLPSNMAFEVYQAL 180
           SQNQCNDKWDNLLRDYKKVRE+ESRACDQ QIPSYWKMEKHERKD NLPSNMAFEVYQAL
Sbjct: 121 SQNQCNDKWDNLLRDYKKVREYESRACDQ-QIPSYWKMEKHERKDKNLPSNMAFEVYQAL 180

Query: 181 NDVVQRKL---------RGVSVAVVAGPPPS---PSPAEGEAAAGTSSPAASESSSSSSS 240
           NDVVQRK           G+ +  +  PPPS   P P        T+SP  SE   SSSS
Sbjct: 181 NDVVQRKFSQKPSNSSNTGILLLPLPAPPPSALLPPP------TATNSPQLSE---SSSS 240

Query: 241 GREWGQKKEKRERKRRR----VGRSIERSASAVAQTLRTCEEQREIRHQQLMELKKRRLQ 300
           G E  +KKEK E KRR+    +GR IERS SA+ QTL +CEEQREIRHQQLMEL+KRRLQ
Sbjct: 241 GTESSEKKEKVEAKRRKMEDNIGRRIERSVSALGQTLHSCEEQREIRHQQLMELRKRRLQ 300

Query: 301 IQEARNHIQGQGIADLVAAVANLS-GINNRRRRRRRSEEYE-CLYSGEEVRMLKEQNEAM 360
           I+E RNHI  QGIADLVAAVANLS GI+N   RR RSE YE CLYSGEEVR+LKEQNEAM
Sbjct: 301 IEETRNHIHRQGIADLVAAVANLSAGIDN--DRRGRSEGYESCLYSGEEVRILKEQNEAM 360

Query: 361 QAELSSVKTELSQLRDQMPSLVRTMMHNVMHNIPPPPP--PSTDP---GGDA 384
           QAEL +VK ELSQLRDQMPSL++TMMHN++HNIPPPPP   S DP   GGDA
Sbjct: 361 QAELMNVKNELSQLRDQMPSLMQTMMHNMLHNIPPPPPSTSSMDPSGSGGDA 392

[Close]

BLAST of CmoCh04G000070 vs. NCBI nr
Match: gi|700195606|gb|KGN50783.1| (hypothetical protein Csa_5G261720 [Cucumis sativus])

HSP 1 Score: 376.3 bits (965), Expect = 6.3e-101
Identity = 222/324 (68.52%), Postives = 242/324 (74.69%), Query Frame = 1


Query: 1   MSEPPTTSTEPQRQHQHEQQQHPHHLLHLPLIHGGASTGTTARINTAVATSPSTVIVREY 60
           MS+PPTTS+EP   H      H  HL  LP+IH GA+ GT  R+NTA ATS S VIVREY
Sbjct: 1   MSDPPTTSSEPPHHH------HQQHLPRLPVIHSGATGGT--RMNTAAATSSSAVIVREY 60

Query: 61  RKGNWSLQETMILITAKKLDEERRNKAEQG------TARKGSELRWKWVENYCWSQGCER 120
           RKGNW+LQETMILITAKKLD+ERRNKA  G       ARKG ELRWKWVENYCWS GC+R
Sbjct: 61  RKGNWTLQETMILITAKKLDDERRNKANLGPSTVDPAARKGGELRWKWVENYCWSHGCQR 120

Query: 121 SQNQCNDKWDNLLRDYKKVREHESRACDQSQIPSYWKMEKHERKDNNLPSNMAFEVYQAL 180
           SQNQCNDKWDNLLRDYKKVRE+ESRACDQ QIPSYWKMEKHERKD NLPSNMAFEVYQAL
Sbjct: 121 SQNQCNDKWDNLLRDYKKVREYESRACDQ-QIPSYWKMEKHERKDKNLPSNMAFEVYQAL 180

Query: 181 NDVVQRKL---------RGVSVAVVAGPPPS---PSPAEGEAAAGTSSPAASESSSSSSS 240
           NDVVQRK           G+ +  +  PPPS   P P        T+SP  SE   SSSS
Sbjct: 181 NDVVQRKFSQKPSNSSNTGILLLPLPAPPPSALLPPP------TATNSPQLSE---SSSS 240

Query: 241 GREWGQKKEKRERKRRR----VGRSIERSASAVAQTLRTCEEQREIRHQQLMELKKRRLQ 300
           G E  +KKEK E KRR+    +GR IERS SA+ QTL +CEEQREIRHQQLMEL+KRRLQ
Sbjct: 241 GTESSEKKEKVEAKRRKMEDNIGRRIERSVSALGQTLHSCEEQREIRHQQLMELRKRRLQ 300

Query: 301 IQEARNHIQGQGIADLVAAVANLS 303
           I+E RNHI  QGIADLVAAVANLS
Sbjct: 301 IEETRNHIHRQGIADLVAAVANLS 306

[Close]

BLAST of CmoCh04G000070 vs. NCBI nr
Match: gi|1009152822|ref|XP_015894304.1| (PREDICTED: trihelix transcription factor ASR3-like [Ziziphus jujuba])

HSP 1 Score: 267.7 bits (683), Expect = 3.1e-68
Identity = 168/327 (51.38%), Postives = 214/327 (65.44%), Query Frame = 1


Query: 1   MSEPPTTS--------TEPQRQHQHEQQQHPHHLLHLPLIHGGASTGTTARINTAVATSP 60
           MSEP TTS          PQ+Q Q  QQQ PHH       H  +   + A +    ++S 
Sbjct: 1   MSEPTTTSPAATISPPVNPQQQQQ--QQQQPHH-------HRKSPHFSAASVGPTTSSST 60

Query: 61  STVIVREYRKGNWSLQETMILITAKKLDEERRNKAEQG------TARKGSELRWKWVENY 120
           ST I REYRKGNW++QET+ILITAKKLDEERR KA         T+    ELRWKWVENY
Sbjct: 61  STPIEREYRKGNWTIQETLILITAKKLDEERRYKARSAPPDPTSTSTTKGELRWKWVENY 120

Query: 121 CWSQGCERSQNQCNDKWDNLLRDYKKVREHESRACDQSQIPSYWKMEKHERKDNNLPSNM 180
           CWSQGC RS NQCNDKWDNLLRDYKKVRE+ES A  +  +PSYW MEK +RK  NLPSNM
Sbjct: 121 CWSQGCLRSSNQCNDKWDNLLRDYKKVREYESNAQSKPDLPSYWNMEKQDRKLRNLPSNM 180

Query: 181 AFEVYQALNDVVQRKLRGVSVAV----VAGPPPSPSPAEGE---AAAGTSSPAASESSSS 240
           A EV+QALN+V+QRK    + A+         PSP+P        A  TS+PA SE   S
Sbjct: 181 ALEVFQALNEVLQRKYSTQTTALRDPQTLSVSPSPAPLAARPLLPAPTTSAPAPSE--RS 240

Query: 241 SSSGREWGQKKEK----RERKRRRVGRSIERSASAVAQTLRTCEEQREIRHQQLMELKKR 300
            SSG E  +K E+    + +K  ++  SI+RSAS +A+TL+ CEE++E RH+++ME++++
Sbjct: 241 DSSGTEASEKDEETSDTKRKKHGKISSSIKRSASLLAKTLQNCEEKKEKRHREIMEMERK 300

Query: 301 RLQIQEARNHIQGQGIADLVAAVANLS 303
           +L+I+EA N +  QG+ +LV AVANLS
Sbjct: 301 KLEIEEAHNEVNRQGMVNLVGAVANLS 316

[Close]

BLAST of CmoCh04G000070 vs. NCBI nr
Match: gi|802598104|ref|XP_012072429.1| (PREDICTED: uncharacterized protein LOC105634212 [Jatropha curcas])

HSP 1 Score: 254.6 bits (649), Expect = 2.8e-64
Identity = 158/321 (49.22%), Postives = 200/321 (62.31%), Query Frame = 1


Query: 1   MSEPPTTSTEPQRQHQHEQQQHPHHLLHLPLIHGGASTGTTARINTAVATSPSTVIVREY 60
           MS+PPT+   P      + Q  P    HLPL+   A+T TT   +            REY
Sbjct: 1   MSQPPTSIPPPP-----QPQPQPQPPSHLPLLPFSATTTTTPTSSN-----------REY 60

Query: 61  RKGNWSLQETMILITAKKLDEERRNKAEQGTARKGSELRWKWVENYCWSQGCERSQNQCN 120
           RKGNW++QET+ LITAKKLD+ERR+K    +  K  ELRWKWVENYCW+ GC RSQNQCN
Sbjct: 61  RKGNWTIQETLTLITAKKLDDERRSKPTVPSTSKPGELRWKWVENYCWAHGCYRSQNQCN 120

Query: 121 DKWDNLLRDYKKVREHESRACDQSQIPSYWKMEKHERKDNNLPSNMAFEVYQALNDVVQR 180
           DKWDNLLRDYKKVRE++SR+      PSYW ME+H+RK  NLPSNM+ EV++ALN VVQR
Sbjct: 121 DKWDNLLRDYKKVREYQSRSDGSDSFPSYWTMERHQRKYYNLPSNMSLEVFEALNQVVQR 180

Query: 181 KLRGVS---------------VAVVAGPPPSP-SPAEGEAAAGTSSPAASESSSSS---S 240
           +   ++               V VVA  P SP +  E    A    PA SE S SS   S
Sbjct: 181 RYTNITQQNVVVSPQQQQQQQVTVVADVPVSPVTLREVVPEALMDRPALSEGSESSATES 240

Query: 241 SGREWGQKKEKRERKRRRVGRSIERSASAVAQTLRTCEEQREIRHQQLMELKKRRLQIQE 300
           S +      ++R  K   +G SI+ SAS +AQT+R CEE++E RHQ+LME ++RRLQ++E
Sbjct: 241 SDKHDSGGSKRRRMKNNNIGASIKHSASILAQTIRNCEEKKEKRHQELMEFEQRRLQLEE 300

Query: 301 ARNHIQGQGIADLVAAVANLS 303
            RN +  QG+A+L  AV NLS
Sbjct: 301 TRNEVNRQGMANLAMAVTNLS 305

The following BLAST results are available for this feature:

BLAST of CmoCh04G000070 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G000070 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KME8_CUCSA	4.4e-101	68.52	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G261720 PE=4 SV=1	[more]
A0A067KQ45_JATCU	1.9e-64	49.22	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04860 PE=4 SV=1	[more]
K7N4B1_SOYBN	3.3e-64	47.27	Uncharacterized protein OS=Glycine max GN=GLYMA_20G184500 PE=4 SV=1	[more]
V7BD78_PHAVU	3.6e-63	46.67	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G100500g PE=4 SV=1	[more]
B9S7A3_RICCO	6.2e-63	50.16	Transcription factor, putative OS=Ricinus communis GN=RCOM_0775080 PE=4 SV=1	[more]

BLAST of CmoCh04G000070 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G31310.1	1.9e-39	47.21	hydroxyproline-rich glycoprotein family protein	[more]
AT2G35640.1	2.8e-38	51.80	Homeodomain-like superfamily protein	[more]
AT2G33550.1	9.6e-07	26.64	Homeodomain-like superfamily protein	[more]

BLAST of CmoCh04G000070 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114054\|ref\|XP_008456886.1\|	6.9e-132	70.59	PREDICTED: uncharacterized protein LOC103496697 [Cucumis melo]	[more]
gi\|778701746\|ref\|XP_004140413.2\|	1.3e-130	69.66	PREDICTED: trihelix transcription factor PTL-like [Cucumis sativus]	[more]
gi\|700195606\|gb\|KGN50783.1\|	6.3e-101	68.52	hypothetical protein Csa_5G261720 [Cucumis sativus]	[more]
gi\|1009152822\|ref\|XP_015894304.1\|	3.1e-68	51.38	PREDICTED: trihelix transcription factor ASR3-like [Ziziphus jujuba]	[more]
gi\|802598104\|ref\|XP_012072429.1\|	2.8e-64	49.22	PREDICTED: uncharacterized protein LOC105634212 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR017877	Myb-like_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G000070.1	CmoCh04G000070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017877	Myb-like domain	PROFILE	PS50090	MYB_LIKE	coord: 57..127 score: 7
None	No IPR available	unknown	Coil	Coil	coord: 326..353 scor
None	No IPR available	GENE3D	G3DSA:1.20.5.170		coord: 307..355 score: 1.
None	No IPR available	PANTHER	PTHR33492	FAMILY NOT NAMED	coord: 26..323 score: 3.5
None	No IPR available	PANTHER	PTHR33492:SF5	SUBFAMILY NOT NAMED	coord: 26..323 score: 3.5
None	No IPR available	PFAM	PF13837	Myb_DNA-bind_4	coord: 64..154 score: 2.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G000070	CmaCh04G000050	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G000070	Cla016907	Watermelon (97103) v1	cmowmB736
CmoCh04G000070	CSPI05G12960	Wild cucumber (PI 183967)	cmocpiB760
CmoCh04G000070	Cp4.1LG01g06400	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G000070	CsaV3_5G012890	Cucumber (Chinese Long) v3	cmocucB0862
CmoCh04G000070	CsGy5G009620	Cucumber (Gy14) v2	cgybcmoB641

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G000070	Cucumber (Chinese Long) v3	cmocucB0893
CmoCh04G000070	Watermelon (97103) v2	cmowmbB703
CmoCh04G000070	Wax gourd	cmowgoB0898
CmoCh04G000070	Cucumber (Chinese Long) v2	cmocuB734
CmoCh04G000070	Watermelon (Charleston Gray)	cmowcgB627