CmaCh19G007690.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh19G007690.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Chloroplast signal recognition particle component
Location	Cma_Chr19 : 7574879 .. 7575802 (+)
Sequence length	924

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGACCAGTCTCTCTGCCCCAAGCAACCTCTCCCATCCCCCTCTCGGATTCCCCATCTCAATCTCCGCCGCAACTTCAAATGTTTCACACACTACGCCCTCCAAACCAATAAGCACCACGCACAACGGACTCACAAACCAGAGGACAATGAATCCCACGGCGAGGTCGATGCCATCATCGGAAGTCGAGCTCGGTCCGACGCCGCCGGGATGGAGTATCTAATCAAATGGAAAGACGGGTATTCCCCAACATGGGTCGCCTCCAATTTCATTGCTAAACACATTGTCGCAGACTACGAAGCCCCTTGGTGGACAGCTGCCAAGAAAGCCAACGAATCCGCATTAAAATCCCTCATAGACGCCGCCGACGGCCGCGATTTCGATTCCGTTGACGGAGATGGCAGAACCGCTCTGCTCTTCGTCGCTGGGCTTGGGTCAGAGCCGTGCGTGAGAATGTTAGCCGAGGCCGGCGTGAATCTCGATCACCGTGACTACTGCGGTGGGTTCACAGCGCTGCATATGGCGGCTGGGTATGTGAAACCAGGGACGGTGGAGTTGTTGGTGGATTTGGGGGCGGATCCGGAGGTCGAAGATAATAAGGGTCGGACGCCGTTGGGTCTGGCAAAAGGGATACTGAAAGCGACGCCGAAGGTTCATTTCGTGAGGAGAGTGGGGCTGGAGAGAGTGATCGGAGCGGTGGAGAAGGTGTGTTTTGAGTACGCGGAGGTGGAGAGATTGCTGGGGAGAAGGGGGATGGGAGAAGATTTGGAGTATTTGGTGAAATGGAAGGACGGAGAGGATAATGAGTGGGTGAATGTGGGGTTGATTTCGGCGGAGTTGGTGGCGGATTTTGAAGCTGCGTTGGAATACGCGGTGGCGGAGGCGGTGGTTGAGAAGAGGCTTAGGGAATGGGGACGATGA

mRNA sequence

ATGGACGACCAGTCTCTCTGCCCCAAGCAACCTCTCCCATCCCCCTCTCGGATTCCCCATCTCAATCTCCGCCGCAACTTCAAATGTTTCACACACTACGCCCTCCAAACCAATAAGCACCACGCACAACGGACTCACAAACCAGAGGACAATGAATCCCACGGCGAGGTCGATGCCATCATCGGAAGTCGAGCTCGGTCCGACGCCGCCGGGATGGAGTATCTAATCAAATGGAAAGACGGGTATTCCCCAACATGGGTCGCCTCCAATTTCATTGCTAAACACATTGTCGCAGACTACGAAGCCCCTTGGTGGACAGCTGCCAAGAAAGCCAACGAATCCGCATTAAAATCCCTCATAGACGCCGCCGACGGCCGCGATTTCGATTCCGTTGACGGAGATGGCAGAACCGCTCTGCTCTTCGTCGCTGGGCTTGGGTCAGAGCCGTGCGTGAGAATGTTAGCCGAGGCCGGCGTGAATCTCGATCACCGTGACTACTGCGGTGGGTTCACAGCGCTGCATATGGCGGCTGGGTATGTGAAACCAGGGACGGTGGAGTTGTTGGTGGATTTGGGGGCGGATCCGGAGGTCGAAGATAATAAGGGTCGGACGCCGTTGGGTCTGGCAAAAGGGATACTGAAAGCGACGCCGAAGGTTCATTTCGTGAGGAGAGTGGGGCTGGAGAGAGTGATCGGAGCGGTGGAGAAGGTGTGTTTTGAGTACGCGGAGGTGGAGAGATTGCTGGGGAGAAGGGGGATGGGAGAAGATTTGGAGTATTTGGTGAAATGGAAGGACGGAGAGGATAATGAGTGGGTGAATGTGGGGTTGATTTCGGCGGAGTTGGTGGCGGATTTTGAAGCTGCGTTGGAATACGCGGTGGCGGAGGCGGTGGTTGAGAAGAGGCTTAGGGAATGGGGACGATGA

Coding sequence (CDS)

ATGGACGACCAGTCTCTCTGCCCCAAGCAACCTCTCCCATCCCCCTCTCGGATTCCCCATCTCAATCTCCGCCGCAACTTCAAATGTTTCACACACTACGCCCTCCAAACCAATAAGCACCACGCACAACGGACTCACAAACCAGAGGACAATGAATCCCACGGCGAGGTCGATGCCATCATCGGAAGTCGAGCTCGGTCCGACGCCGCCGGGATGGAGTATCTAATCAAATGGAAAGACGGGTATTCCCCAACATGGGTCGCCTCCAATTTCATTGCTAAACACATTGTCGCAGACTACGAAGCCCCTTGGTGGACAGCTGCCAAGAAAGCCAACGAATCCGCATTAAAATCCCTCATAGACGCCGCCGACGGCCGCGATTTCGATTCCGTTGACGGAGATGGCAGAACCGCTCTGCTCTTCGTCGCTGGGCTTGGGTCAGAGCCGTGCGTGAGAATGTTAGCCGAGGCCGGCGTGAATCTCGATCACCGTGACTACTGCGGTGGGTTCACAGCGCTGCATATGGCGGCTGGGTATGTGAAACCAGGGACGGTGGAGTTGTTGGTGGATTTGGGGGCGGATCCGGAGGTCGAAGATAATAAGGGTCGGACGCCGTTGGGTCTGGCAAAAGGGATACTGAAAGCGACGCCGAAGGTTCATTTCGTGAGGAGAGTGGGGCTGGAGAGAGTGATCGGAGCGGTGGAGAAGGTGTGTTTTGAGTACGCGGAGGTGGAGAGATTGCTGGGGAGAAGGGGGATGGGAGAAGATTTGGAGTATTTGGTGAAATGGAAGGACGGAGAGGATAATGAGTGGGTGAATGTGGGGTTGATTTCGGCGGAGTTGGTGGCGGATTTTGAAGCTGCGTTGGAATACGCGGTGGCGGAGGCGGTGGTTGAGAAGAGGCTTAGGGAATGGGGACGATGA

Protein sequence

MDDQSLCPKQPLPSPSRIPHLNLRRNFKCFTHYALQTNKHHAQRTHKPEDNESHGEVDAIIGSRARSDAAGMEYLIKWKDGYSPTWVASNFIAKHIVADYEAPWWTAAKKANESALKSLIDAADGRDFDSVDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKPGTVELLVDLGADPEVEDNKGRTPLGLAKGILKATPKVHFVRRVGLERVIGAVEKVCFEYAEVERLLGRRGMGEDLEYLVKWKDGEDNEWVNVGLISAELVADFEAALEYAVAEAVVEKRLREWGR

Homology

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BLAST of CmaCh19G007690.1 vs. Swiss-Prot
Match: SR43C_ARATH (Signal recognition particle 43 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=CAO PE=1 SV=2)

HSP 1 Score: 305.1 bits (780), Expect = 8.9e-82
Identity = 160/302 (52.98%), Postives = 211/302 (69.87%), Query Frame = 1


Query: 14  SPSRIPHLNLRRNFKCFTHYALQTNKHHA-----QRTHKPEDNESHGEVDAIIGSRARSD 73
           SP  +P   +   F+     A+Q N         +     E + S+GEV+ IIGSR   +
Sbjct: 38  SPESLPIRRIELCFRGAICAAVQRNYEETTSSVEEAEEDDESSSSYGEVNKIIGSRTAGE 97

Query: 74  AAGMEYLIKWKDGYSPTWVASNFIAKHIVADYEAPWWTAAKKANESALKSLIDAADGRDF 133
            A MEYLI+WKDG+SP+WV S++IA  +V++YE PWWTAA+KA+E AL  L++    RD 
Sbjct: 98  GA-MEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE---DRDV 157

Query: 134 DSVDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKPGTVELL 193
           D+VD +GRTALLFVAGLGS+ CVR+LAEAG +LDHRD  GG TALHMAAGYV+P  VE L
Sbjct: 158 DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEAL 217

Query: 194 VDLGADPEVEDNKGRTPLGLAKGILKATPK---VHFVRRVGLERVIGAVEKVCFEYAEVE 253
           V+LGAD EVED +G T L LA+ ILK TPK   + F RR+GLE+VI  +E   FEYAEV+
Sbjct: 218 VELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVD 277

Query: 254 RLLGRRGMGEDLEYLVKWKDGEDNEWVNVGLISAELVADFEAALEYAVAEAVVEKRLREW 308
            ++ +RG G+D+EYLV+WKDG D EWV    ++ ++  D+E  LEYAVAE+V+ KR+ + 
Sbjct: 278 EIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAVAESVIGKRVGDD 335

[Close]

BLAST of CmaCh19G007690.1 vs. Swiss-Prot
Match: SR43C_ORYSJ (Probable signal recognition particle 43 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0131900 PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 7.6e-65
Identity = 137/318 (43.08%), Postives = 191/318 (60.06%), Query Frame = 1


Query: 9   KQPLPSPSRIPHLNL---------RRNFKCFTHYALQTNKHHAQRTHKPEDNESHGEVDA 68
           K P P+  R P L++          R       +  QTN  +   +   +D+E++GEVD 
Sbjct: 14  KPPNPNAQRTPALSITVPFRLRLPNRRLTAAAVFQDQTNPRNPA-SKGGDDDEAYGEVDR 73

Query: 69  IIGSR-----------ARSDAAGMEYLIKWKDGYSPTWVASNFIAKHIVADYEAPWWTAA 128
           I+ SR           + +     EYL++WKDG+ P+W+ +  IA  +VA+YE PWWTAA
Sbjct: 74  IVSSRTIKNPVFAEDGSATTVTATEYLVEWKDGHEPSWIPAEAIAADVVAEYETPWWTAA 133

Query: 129 KKANESALKSLI-DAADGRDFDSVDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYC 188
           KKA+ + + +L+ D    RD D+ D  GRTA+ F AGLGSE CVR LAEAG ++   +  
Sbjct: 134 KKADAAEITALLADETLRRDPDAEDAQGRTAMHFAAGLGSEECVRALAEAGADVGRPERA 193

Query: 189 GG-FTALHMAAGYVKPGTVELLVDLGADPEVEDNKGRTPLGLAKGILKATPKVH---FVR 248
           GG  T LH+A GY +P  V  L++LGA+PE  D +GRTPL L + +L  TPK +   F R
Sbjct: 194 GGGLTPLHIAVGYGRPAAVRALLELGAEPEAPDGQGRTPLELVQDVLAKTPKGNPATFER 253

Query: 249 RVGLERVIGAVEKVCFEYAEVERLLGRRGMGEDLEYLVKWKDGEDNEWVNVGLISAELVA 302
           R+ LE     +EK  +E+ EVE+++  RG G+  EYLV+W+DG D EWV    ++ +LV 
Sbjct: 254 RLALEAAAKELEKAVYEWGEVEKVVDGRGEGKWREYLVEWRDGGDREWVRAAWVAEDLVK 313

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BLAST of CmaCh19G007690.1 vs. Swiss-Prot
Match: ANKH_ALLVD (Ankyrin homolog OS=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) GN=Alvin_1094 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.7e-08
Identity = 41/100 (41.00%), Postives = 49/100 (49.00%), Query Frame = 1


Query: 107 AAKKANESALKSLIDAADGRDFDSVDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDY 166
           AA K     L  LI+   G D ++ D  G TALL  A  G    V  LA  G  LD  D 
Sbjct: 171 AASKGETGVLPLLIEG--GADLEARDKQGATALLIAADQGQAGAVETLAGLGAQLDAVDA 230

Query: 167 CGGFTALHMAAGYVKPGTVELLVDLGADPEVEDNKGRTPL 207
            G  TAL +A G+     VE L+ +GADP  +D KG T L
Sbjct: 231 LGS-TALILAVGHGHVAMVERLLAMGADPNRQDRKGTTAL 267

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BLAST of CmaCh19G007690.1 vs. Swiss-Prot
Match: ANR54_BOVIN (Ankyrin repeat domain-containing protein 54 OS=Bos taurus GN=ANKRD54 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 8.5e-08
Identity = 52/159 (32.70%), Postives = 73/159 (45.91%), Query Frame = 1


Query: 115 ALKSLIDAADGRDFDSV-------------DGDGRTALLFVAGLGSEPCVRMLAEAGVNL 174
           ALK L D+A+  D ++V             D  GRTAL F +  G++  V++L + G + 
Sbjct: 109 ALKRLRDSANANDVETVQQLLEEGTDPCAADDKGRTALHFASCNGNDQIVQLLLDHGADP 168

Query: 175 DHRDYCGGFTALHMAAGYVKPGTVELLVDLGADPEVEDNKGRTPLGLAKGILKATPKVHF 234
           + RD  G  T LH+AA       +  L+  GA  +  D  GRTPL LAK  L    + H 
Sbjct: 169 NQRDGLGN-TPLHLAACTNHAPVITTLLRGGARVDALDRAGRTPLHLAKSKLNILQEGH- 228

Query: 235 VRRVGLERVIGAVEKVCFEYAEVERLLGRRGMGEDLEYL 261
                LE V   V+++     E    LGR    E L+ L
Sbjct: 229 --SQCLEAVRLEVKQIIQMLREYLERLGRHEQRERLDDL 263

[Close]

BLAST of CmaCh19G007690.1 vs. Swiss-Prot
Match: ANR50_HUMAN (Ankyrin repeat domain-containing protein 50 OS=Homo sapiens GN=ANKRD50 PE=1 SV=4)

HSP 1 Score: 58.9 bits (141), Expect = 1.1e-07
Identity = 55/192 (28.65%), Postives = 81/192 (42.19%), Query Frame = 1


Query: 40  HHAQRTHKPEDNESHGEVDAIIGSRARSDAAGMEYLIKW--------KDGYSPTWVAS-- 99
           H A+  H+  D  +   V A+    ++  A+ +  LI          KDG +P  VA+  
Sbjct: 699 HGAEVNHEDVDGRTALSVAALCVPASKGHASVVSLLIDRGAEVDHCDKDGMTPLLVAAYE 758

Query: 100 ------------NFIAKHIVADYEAPWWTAAKKANESALKSLIDAADGRDFDSVDGDGRT 159
                            H   +   P   AA   + S + +L+    G   DS+D +GRT
Sbjct: 759 GHVDVVDLLLEGGADVDHTDNNGRTPLLAAASMGHASVVNTLLFW--GAAVDSIDSEGRT 818

Query: 160 ALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKPGTVELLVDLGADPEV 210
            L   +  G+   VR L + G++ +HRD   G+T LHMAA        E L++ GA    
Sbjct: 819 VLSIASAQGNVEVVRTLLDRGLDENHRD-DAGWTPLHMAAFEGHRLICEALIEQGARTNE 878

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BLAST of CmaCh19G007690.1 vs. TrEMBL
Match: A0A0A0K634_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G018780 PE=4 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 8.5e-124
Identity = 224/302 (74.17%), Postives = 259/302 (85.76%), Query Frame = 1


Query: 6   LCPKQPLPSPSRIPHLNLRRNFKCFTHYALQTNKHHAQRTHKPEDNESHGEVDAIIGSRA 65
           L PK PLP PS IPHLNLRRNF  FT YA+Q+++   Q+T KPED+ES+GEVD IIGSRA
Sbjct: 15  LPPKTPLPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDDESYGEVDGIIGSRA 74

Query: 66  RSDAAGMEYLIKWKDGYSPTWVASNFIAKHIVADYEAPWWTAAKKANESALKSLIDAADG 125
             DA GMEYLIKWKDG+SP+WV S+FIAK +VA+YE PWWTAAKKA+ESALKSLID+ D 
Sbjct: 75  LPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDE 134

Query: 126 RDFDSVDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKPGTV 185
           RDFD+VD DGRTALLFV+GLGS  CVR+LA+AGVNL+HRD  GGFTALHMAAGYVKP TV
Sbjct: 135 RDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETV 194

Query: 186 ELLVDLGADPEVEDNKGRTPLGLAKGILKATPKVHFVRRVGLERVIGAVEKVCFEYAEVE 245
           ELLV+LGADPE++D KGRT L LAK ILKATP+V F+RR+GLE+VI AVEKV +EYAEVE
Sbjct: 195 ELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVE 254

Query: 246 RLLGRRGMGEDLEYLVKWKDGEDNEWVNVGLISAELVADFEAALEYAVAEAVVEKRLREW 305
            LL +RG GE+LEYLVKWKDGEDNEWV VGLI+ +LV D+EA LEYAVAEAVV KR+ + 
Sbjct: 255 ELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAGLEYAVAEAVVGKRVGDD 314

Query: 306 GR 308
           G+
Sbjct: 315 GK 316

[Close]

BLAST of CmaCh19G007690.1 vs. TrEMBL
Match: B9RF69_RICCO (Ankyrin repeat domain protein, putative OS=Ricinus communis GN=RCOM_1431980 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 3.4e-96
Identity = 179/302 (59.27%), Postives = 223/302 (73.84%), Query Frame = 1


Query: 11  PLPSPSRIPHLNLRRN--FKCFTHYALQTNKHHAQRTHKPEDNESHGEVDAIIGSRARSD 70
           P  SPS   H  L+       FT +A+Q  +         +D+ES+GEV  IIGS+A  D
Sbjct: 22  PSSSPSFFSHQFLKTQPLKPSFTLFAIQNQETQNPLQPSTQDDESYGEVSKIIGSKALED 81

Query: 71  AAGMEYLIKWKDGYSPTWVASNFIAKHIVADYEAPWWTAAKKANESALKSLIDAADGRDF 130
             GMEYLI+WKDG++P+WV SN+IAK ++A+YE+PWWTAAKKA+ +AL  L+ A D RD 
Sbjct: 82  GTGMEYLIEWKDGHTPSWVPSNYIAKDVIAEYESPWWTAAKKADHAALSELLSADDDRDV 141

Query: 131 DSVDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKPGTVELL 190
           D+VD  GRTALLFV+GLGSEPCV++LAEAG +L+HRD  GG TALHMAAGYV+PG V+LL
Sbjct: 142 DAVDSYGRTALLFVSGLGSEPCVKLLAEAGADLNHRDNSGGLTALHMAAGYVQPGIVKLL 201

Query: 191 VDLGADPEVEDNKGRTPLGLAKGILKATPK---VHFVRRVGLERVIGAVEKVCFEYAEVE 250
           ++LGADPEVED+KG TPL LAK IL  TPK     F RR+GLE VI  + +  FEYAEV+
Sbjct: 202 IELGADPEVEDDKGLTPLALAKQILNVTPKGNPAQFARRLGLENVIRVINEEIFEYAEVQ 261

Query: 251 RLLGRRGMGEDLEYLVKWKDGEDNEWVNVGLISAELVADFEAALEYAVAEAVVEKRLREW 308
            LL +RG G+ +EYLVKWKDG DNEWV  G+I  +L+ DFEA LEYAVAE V+ KR+RE 
Sbjct: 262 ELLEKRGKGDKVEYLVKWKDGSDNEWVKAGVIGEDLIRDFEAGLEYAVAEGVMGKRVRED 321

[Close]

BLAST of CmaCh19G007690.1 vs. TrEMBL
Match: V7ADE1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G025300g PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.3e-95
Identity = 179/302 (59.27%), Postives = 223/302 (73.84%), Query Frame = 1


Query: 8   PKQPLPSPSRIPHLNLRRNFKCFTHYALQTNKHHAQRTHKPEDNESHGEVDAIIGSRARS 67
           PK        +P  N    F+  T  A+Q  +  A    K  ++ES+GEV  IIGSRA  
Sbjct: 70  PKHFFKQQPFLPIPNNPTRFRLVTA-AIQNQQQEAAAASKDTEDESYGEVKGIIGSRALD 129

Query: 68  DAAGMEYLIKWKDGYSPTWVASNFIAKHIVADYEAPWWTAAKKANESALKSLIDAADGRD 127
            AAGMEYLI+WKDG++P+WV ++FIAK +VA+YE PWWTAAKKA+ESAL++L+D+ DGRD
Sbjct: 130 TAAGMEYLIEWKDGHAPSWVPADFIAKDVVAEYETPWWTAAKKADESALRNLVDSGDGRD 189

Query: 128 FDSVDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKPGTVEL 187
            D+VD DGRTALLFVAGLGSEPCV++LAEAG NLDHRD  GG  ALHMAAGYV+PG  +L
Sbjct: 190 VDAVDADGRTALLFVAGLGSEPCVKLLAEAGANLDHRDRSGGLAALHMAAGYVRPGVAKL 249

Query: 188 LVDLGADPEVEDNKGRTPLGLAKGILKATPK---VHFVRRVGLERVIGAVEKVCFEYAEV 247
           L+D GADPEV D++GRT L LA+ ILKATPK   + F RR+GLE V+  +E   FEY E 
Sbjct: 250 LLDFGADPEVADDRGRTALDLAREILKATPKGNPMQFGRRIGLEGVVRVLEGAVFEYVEA 309

Query: 248 ERLLGRRGMGEDLEYLVKWKDGEDNEWVNVGLISAELVADFEAALEYAVAEAVVEKRLRE 307
           + +L +RG GE+LEYLV+WKDGE NEWV    ++ +LV D EA LEYAVAEAV+ KR+ +
Sbjct: 310 QEILEQRGKGENLEYLVRWKDGEANEWVKAKFVAEDLVRDHEAGLEYAVAEAVLAKRVAD 369

[Close]

BLAST of CmaCh19G007690.1 vs. TrEMBL
Match: A0A0L9V8W8_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g192600 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.7e-95
Identity = 181/294 (61.56%), Postives = 226/294 (76.87%), Query Frame = 1


Query: 19  PHLNLRRN---FKCFTHYALQTNKHHAQRTHKPEDNESHGEVDAIIGSRARSDAAGMEYL 78
           P L +R+N   F+  T  ALQ N+   Q   K  ++ES+GEV  IIGSRA   A GMEYL
Sbjct: 31  PFLPIRQNPTRFRLVTA-ALQ-NQQQQQAASKDTEDESYGEVKGIIGSRALDAATGMEYL 90

Query: 79  IKWKDGYSPTWVASNFIAKHIVADYEAPWWTAAKKANESALKSLIDAADGRDFDSVDGDG 138
           I+WKDG+ P+WV ++FIAK +VA+YE PWWTAAKKA+E AL++L+++ADGRD D+VD +G
Sbjct: 91  IEWKDGHEPSWVPADFIAKDVVAEYETPWWTAAKKADEPALRNLLESADGRDVDAVDAEG 150

Query: 139 RTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKPGTVELLVDLGADP 198
           RTALLFVAGLGSEPCV++LAEAG NLDHRD  GG  ALHMAAGYV+PG  ++L+DLGADP
Sbjct: 151 RTALLFVAGLGSEPCVKLLAEAGANLDHRDRSGGLAALHMAAGYVRPGVAKVLLDLGADP 210

Query: 199 EVEDNKGRTPLGLAKGILKATPK---VHFVRRVGLERVIGAVEKVCFEYAEVERLLGRRG 258
           EV D++GRT L LA+ ILKATPK   + F RR+GLE V+  +E   FEYAEVE +L RRG
Sbjct: 211 EVADDRGRTALDLAREILKATPKGNPLQFGRRIGLEGVVRVLEGAVFEYAEVEEILERRG 270

Query: 259 MGEDLEYLVKWKDGEDNEWVNVGLISAELVADFEAALEYAVAEAVVEKRLREWG 307
            GE+LEYLV+WKDG  NEWV    ++ +LV D+EA LEYAVAEAV+ KR+ + G
Sbjct: 271 KGENLEYLVRWKDGGANEWVKAKFVAEDLVRDYEAGLEYAVAEAVLAKRIADEG 322

[Close]

BLAST of CmaCh19G007690.1 vs. TrEMBL
Match: A0A0S3SE85_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G245100 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.7e-95
Identity = 181/294 (61.56%), Postives = 226/294 (76.87%), Query Frame = 1


Query: 19  PHLNLRRN---FKCFTHYALQTNKHHAQRTHKPEDNESHGEVDAIIGSRARSDAAGMEYL 78
           P L +R+N   F+  T  ALQ N+   Q   K  ++ES+GEV  IIGSRA   A GMEYL
Sbjct: 31  PFLPIRQNPTRFRLVTA-ALQ-NQQQQQAASKDTEDESYGEVKGIIGSRALDAATGMEYL 90

Query: 79  IKWKDGYSPTWVASNFIAKHIVADYEAPWWTAAKKANESALKSLIDAADGRDFDSVDGDG 138
           I+WKDG+ P+WV ++FIAK +VA+YE PWWTAAKKA+E AL++L+++ADGRD D+VD +G
Sbjct: 91  IEWKDGHEPSWVPADFIAKDVVAEYETPWWTAAKKADEPALRNLLESADGRDVDAVDAEG 150

Query: 139 RTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKPGTVELLVDLGADP 198
           RTALLFVAGLGSEPCV++LAEAG NLDHRD  GG  ALHMAAGYV+PG  ++L+DLGADP
Sbjct: 151 RTALLFVAGLGSEPCVKLLAEAGANLDHRDRSGGLAALHMAAGYVRPGVAKVLLDLGADP 210

Query: 199 EVEDNKGRTPLGLAKGILKATPK---VHFVRRVGLERVIGAVEKVCFEYAEVERLLGRRG 258
           EV D++GRT L LA+ ILKATPK   + F RR+GLE V+  +E   FEYAEVE +L RRG
Sbjct: 211 EVADDRGRTALDLAREILKATPKGNPLQFGRRIGLEGVVRVLEGAVFEYAEVEEILERRG 270

Query: 259 MGEDLEYLVKWKDGEDNEWVNVGLISAELVADFEAALEYAVAEAVVEKRLREWG 307
            GE+LEYLV+WKDG  NEWV    ++ +LV D+EA LEYAVAEAV+ KR+ + G
Sbjct: 271 KGENLEYLVRWKDGGANEWVKAKFVAEDLVRDYEAGLEYAVAEAVLAKRIADEG 322

[Close]

BLAST of CmaCh19G007690.1 vs. TAIR10
Match: AT2G47450.1 (AT2G47450.1 chloroplast signal recognition particle component (CAO))

HSP 1 Score: 305.1 bits (780), Expect = 5.0e-83
Identity = 160/302 (52.98%), Postives = 211/302 (69.87%), Query Frame = 1


Query: 14  SPSRIPHLNLRRNFKCFTHYALQTNKHHA-----QRTHKPEDNESHGEVDAIIGSRARSD 73
           SP  +P   +   F+     A+Q N         +     E + S+GEV+ IIGSR   +
Sbjct: 38  SPESLPIRRIELCFRGAICAAVQRNYEETTSSVEEAEEDDESSSSYGEVNKIIGSRTAGE 97

Query: 74  AAGMEYLIKWKDGYSPTWVASNFIAKHIVADYEAPWWTAAKKANESALKSLIDAADGRDF 133
            A MEYLI+WKDG+SP+WV S++IA  +V++YE PWWTAA+KA+E AL  L++    RD 
Sbjct: 98  GA-MEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE---DRDV 157

Query: 134 DSVDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKPGTVELL 193
           D+VD +GRTALLFVAGLGS+ CVR+LAEAG +LDHRD  GG TALHMAAGYV+P  VE L
Sbjct: 158 DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEAL 217

Query: 194 VDLGADPEVEDNKGRTPLGLAKGILKATPK---VHFVRRVGLERVIGAVEKVCFEYAEVE 253
           V+LGAD EVED +G T L LA+ ILK TPK   + F RR+GLE+VI  +E   FEYAEV+
Sbjct: 218 VELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVD 277

Query: 254 RLLGRRGMGEDLEYLVKWKDGEDNEWVNVGLISAELVADFEAALEYAVAEAVVEKRLREW 308
            ++ +RG G+D+EYLV+WKDG D EWV    ++ ++  D+E  LEYAVAE+V+ KR+ + 
Sbjct: 278 EIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAVAESVIGKRVGDD 335

[Close]

BLAST of CmaCh19G007690.1 vs. TAIR10
Match: AT4G35450.5 (AT4G35450.5 ankyrin repeat-containing protein 2)

HSP 1 Score: 58.5 bits (140), Expect = 8.2e-09
Identity = 33/88 (37.50%), Postives = 50/88 (56.82%), Query Frame = 1


Query: 123 ADGRDFDSVDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKP 182
           A G + D  D +GRTAL F  G G   C ++L +AG +++  D     T LH AAGY + 
Sbjct: 247 ASGGNKDEEDSEGRTALHFACGYGELKCAQVLIDAGASVNAVDK-NKNTPLHYAAGYGRK 306

Query: 183 GTVELLVDLGADPEVEDNKGRTPLGLAK 211
             V LL++ GA   +++   +TP+ +AK
Sbjct: 307 ECVSLLLENGAAVTLQNLDEKTPIDVAK 333

[Close]

BLAST of CmaCh19G007690.1 vs. TAIR10
Match: AT2G17390.1 (AT2G17390.1 ankyrin repeat-containing 2B)

HSP 1 Score: 56.6 bits (135), Expect = 3.1e-08
Identity = 32/88 (36.36%), Postives = 47/88 (53.41%), Query Frame = 1


Query: 123 ADGRDFDSVDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKP 182
           A G + D  D +GRTAL F  G G   C ++L +AG N +  D     T LH AAGY + 
Sbjct: 241 ASGGNKDEEDSEGRTALHFACGYGEVRCAQVLLDAGANANAIDK-NKNTPLHYAAGYGRK 300

Query: 183 GTVELLVDLGADPEVEDNKGRTPLGLAK 211
             V LL++ GA    ++   + P+ +A+
Sbjct: 301 ECVSLLLENGAAVTQQNMDNKNPIDVAR 327

[Close]

BLAST of CmaCh19G007690.1 vs. TAIR10
Match: AT5G66055.1 (AT5G66055.1 ankyrin repeat protein)

HSP 1 Score: 50.4 bits (119), Expect = 2.2e-06
Identity = 29/80 (36.25%), Postives = 44/80 (55.00%), Query Frame = 1


Query: 131 VDGDGRTALLFVAGLGSEPCVRMLA--EAGVNLDHRDYCGGFTALHMAAGYVKPGTVELL 190
           +D +G T + +     S P +++L    A +N   RD   G+T LH+A    +   V+LL
Sbjct: 322 LDDEGATLMHYAVQTASAPTIKLLLLYNADINAQDRD---GWTPLHVAVQARRSDIVKLL 381

Query: 191 VDLGADPEVEDNKGRTPLGL 209
           +  GAD EV++  G TPLGL
Sbjct: 382 LIKGADIEVKNKDGLTPLGL 398

[Close]

BLAST of CmaCh19G007690.1 vs. TAIR10
Match: AT3G04710.1 (AT3G04710.1 ankyrin repeat family protein)

HSP 1 Score: 49.3 bits (116), Expect = 4.9e-06
Identity = 27/76 (35.53%), Postives = 38/76 (50.00%), Query Frame = 1


Query: 134 DGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKPGTVELLVDLGA 193
           D  T LL     GS  C+ +L +AG   +   + GG T LH+AA       +  L+  GA
Sbjct: 186 DNITPLLSAVAAGSLSCLELLVKAGAKANV--FAGGATPLHIAADIGNLELINCLLKAGA 245

Query: 194 DPEVEDNKGRTPLGLA 210
           DP  +D +G  PL +A
Sbjct: 246 DPNQKDEEGNRPLEVA 259

[Close]

BLAST of CmaCh19G007690.1 vs. NCBI nr
Match: gi|449472373|ref|XP_004153574.1| (PREDICTED: signal recognition particle 43 kDa protein, chloroplastic [Cucumis sativus])

HSP 1 Score: 451.4 bits (1160), Expect = 1.2e-123
Identity = 224/302 (74.17%), Postives = 259/302 (85.76%), Query Frame = 1


Query: 6   LCPKQPLPSPSRIPHLNLRRNFKCFTHYALQTNKHHAQRTHKPEDNESHGEVDAIIGSRA 65
           L PK PLP PS IPHLNLRRNF  FT YA+Q+++   Q+T KPED+ES+GEVD IIGSRA
Sbjct: 15  LPPKTPLPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDDESYGEVDGIIGSRA 74

Query: 66  RSDAAGMEYLIKWKDGYSPTWVASNFIAKHIVADYEAPWWTAAKKANESALKSLIDAADG 125
             DA GMEYLIKWKDG+SP+WV S+FIAK +VA+YE PWWTAAKKA+ESALKSLID+ D 
Sbjct: 75  LPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDE 134

Query: 126 RDFDSVDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKPGTV 185
           RDFD+VD DGRTALLFV+GLGS  CVR+LA+AGVNL+HRD  GGFTALHMAAGYVKP TV
Sbjct: 135 RDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETV 194

Query: 186 ELLVDLGADPEVEDNKGRTPLGLAKGILKATPKVHFVRRVGLERVIGAVEKVCFEYAEVE 245
           ELLV+LGADPE++D KGRT L LAK ILKATP+V F+RR+GLE+VI AVEKV +EYAEVE
Sbjct: 195 ELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVE 254

Query: 246 RLLGRRGMGEDLEYLVKWKDGEDNEWVNVGLISAELVADFEAALEYAVAEAVVEKRLREW 305
            LL +RG GE+LEYLVKWKDGEDNEWV VGLI+ +LV D+EA LEYAVAEAVV KR+ + 
Sbjct: 255 ELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAGLEYAVAEAVVGKRVGDD 314

Query: 306 GR 308
           G+
Sbjct: 315 GK 316

[Close]

BLAST of CmaCh19G007690.1 vs. NCBI nr
Match: gi|659094126|ref|XP_008447899.1| (PREDICTED: signal recognition particle 43 kDa protein, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 451.4 bits (1160), Expect = 1.2e-123
Identity = 222/297 (74.75%), Postives = 259/297 (87.21%), Query Frame = 1


Query: 11  PLPSPSRIPHLNLRRNFKCFTHYALQTNKHHAQRTHKPEDNESHGEVDAIIGSRARSDAA 70
           P+P PS IPHLNLRRNF  FT YA+Q+++   Q+T+KPED+ES+GEVD IIGSRA  DA 
Sbjct: 24  PIPFPSTIPHLNLRRNFTHFTAYAVQSDQPITQQTYKPEDDESYGEVDGIIGSRALPDAT 83

Query: 71  GMEYLIKWKDGYSPTWVASNFIAKHIVADYEAPWWTAAKKANESALKSLIDAADGRDFDS 130
           GMEYLIKWKDG+SP+WV S+FIAK +VA+YE PWWTAAKKA++SAL+SLID+ D RDFD+
Sbjct: 84  GMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADKSALESLIDSGDERDFDA 143

Query: 131 VDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKPGTVELLVD 190
           VD DGRTALLFV+GLGS  CVR+LAEAGVNL+HRD  GGFTALHMAAGYVKP TVELLV+
Sbjct: 144 VDEDGRTALLFVSGLGSVECVRILAEAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVE 203

Query: 191 LGADPEVEDNKGRTPLGLAKGILKATPKVHFVRRVGLERVIGAVEKVCFEYAEVERLLGR 250
           LGADPE+ED KGRT L LAK ILKATP+V F+RR+GLE+VIGAVEKV +EYAEVE LL +
Sbjct: 204 LGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEK 263

Query: 251 RGMGEDLEYLVKWKDGEDNEWVNVGLISAELVADFEAALEYAVAEAVVEKRLREWGR 308
           RG GE+LEYLVKWKDGEDNEWV VGLI+ +LVAD+EA LEYAVAEAVV KR+ + G+
Sbjct: 264 RGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADYEAGLEYAVAEAVVGKRVGDEGK 320

[Close]

BLAST of CmaCh19G007690.1 vs. NCBI nr
Match: gi|659094128|ref|XP_008447900.1| (PREDICTED: signal recognition particle 43 kDa protein, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 451.4 bits (1160), Expect = 1.2e-123
Identity = 222/297 (74.75%), Postives = 259/297 (87.21%), Query Frame = 1


Query: 11  PLPSPSRIPHLNLRRNFKCFTHYALQTNKHHAQRTHKPEDNESHGEVDAIIGSRARSDAA 70
           P+P PS IPHLNLRRNF  FT YA+Q+++   Q+T+KPED+ES+GEVD IIGSRA  DA 
Sbjct: 24  PIPFPSTIPHLNLRRNFTHFTAYAVQSDQPITQQTYKPEDDESYGEVDGIIGSRALPDAT 83

Query: 71  GMEYLIKWKDGYSPTWVASNFIAKHIVADYEAPWWTAAKKANESALKSLIDAADGRDFDS 130
           GMEYLIKWKDG+SP+WV S+FIAK +VA+YE PWWTAAKKA++SAL+SLID+ D RDFD+
Sbjct: 84  GMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADKSALESLIDSGDERDFDA 143

Query: 131 VDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKPGTVELLVD 190
           VD DGRTALLFV+GLGS  CVR+LAEAGVNL+HRD  GGFTALHMAAGYVKP TVELLV+
Sbjct: 144 VDEDGRTALLFVSGLGSVECVRILAEAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVE 203

Query: 191 LGADPEVEDNKGRTPLGLAKGILKATPKVHFVRRVGLERVIGAVEKVCFEYAEVERLLGR 250
           LGADPE+ED KGRT L LAK ILKATP+V F+RR+GLE+VIGAVEKV +EYAEVE LL +
Sbjct: 204 LGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEK 263

Query: 251 RGMGEDLEYLVKWKDGEDNEWVNVGLISAELVADFEAALEYAVAEAVVEKRLREWGR 308
           RG GE+LEYLVKWKDGEDNEWV VGLI+ +LVAD+EA LEYAVAEAVV KR+ + G+
Sbjct: 264 RGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADYEAGLEYAVAEAVVGKRVGDEGK 320

[Close]

BLAST of CmaCh19G007690.1 vs. NCBI nr
Match: gi|1009150816|ref|XP_015893225.1| (PREDICTED: signal recognition particle 43 kDa protein, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 360.9 bits (925), Expect = 2.2e-96
Identity = 174/262 (66.41%), Postives = 214/262 (81.68%), Query Frame = 1


Query: 49  EDNESHGEVDAIIGSRARSDAAGMEYLIKWKDGYSPTWVASNFIAKHIVADYEAPWWTAA 108
           ED+E +GEVD IIGSRA     GMEYLI+WKDG++P+WV+S++IAK +VA+YE PWWTAA
Sbjct: 68  EDDEYYGEVDKIIGSRAAEGKTGMEYLIEWKDGHTPSWVSSDYIAKDVVAEYETPWWTAA 127

Query: 109 KKANESALKSLIDAADGRDFDSVDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCG 168
           KKA+ +ALK LI+A DGRD D+VD DGRTALLFV+GLGSE CVR+LAE+G +LDHRD  G
Sbjct: 128 KKADHNALKRLIEADDGRDIDAVDSDGRTALLFVSGLGSEECVRVLAESGADLDHRDNSG 187

Query: 169 GFTALHMAAGYVKPGTVELLVDLGADPEVEDNKGRTPLGLAKGILKATPK---VHFVRRV 228
           G TALHMAAGYVKPG  +LL++LGADPEV+D++GRTPL LAK ILK TPK   + F RR+
Sbjct: 188 GLTALHMAAGYVKPGVAKLLMELGADPEVQDDRGRTPLDLAKEILKVTPKGNPMQFARRL 247

Query: 229 GLERVIGAVEKVCFEYAEVERLLGRRGMGEDLEYLVKWKDGEDNEWVNVGLISAELVADF 288
           GLE VI A+E+V FEYAEV+ LL +RG G++LEYLVKWKDG+DN WV    I  +L+ D+
Sbjct: 248 GLESVIRALEEVVFEYAEVQELLEKRGKGDNLEYLVKWKDGDDNTWVKARFIGEDLIKDY 307

Query: 289 EAALEYAVAEAVVEKRLREWGR 308
           EA LEYAVAE V+ KRL + G+
Sbjct: 308 EAGLEYAVAEGVLGKRLGDDGK 329

[Close]

BLAST of CmaCh19G007690.1 vs. NCBI nr
Match: gi|1009150731|ref|XP_015893177.1| (PREDICTED: signal recognition particle 43 kDa protein, chloroplastic-like isoform X2 [Ziziphus jujuba])

HSP 1 Score: 360.1 bits (923), Expect = 3.7e-96
Identity = 174/262 (66.41%), Postives = 214/262 (81.68%), Query Frame = 1


Query: 49  EDNESHGEVDAIIGSRARSDAAGMEYLIKWKDGYSPTWVASNFIAKHIVADYEAPWWTAA 108
           ED+E +GEVD IIGSRA     GMEYLI+WKDG++P+WV+S++IAK +VA+YE PWWTAA
Sbjct: 68  EDDEYYGEVDKIIGSRAAEGKTGMEYLIEWKDGHTPSWVSSDYIAKDVVAEYETPWWTAA 127

Query: 109 KKANESALKSLIDAADGRDFDSVDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCG 168
           KKA+ +ALK LI+A DGRD D+VD DGRTALLFV+GLGSE CVR+LAEAG +LDHR+  G
Sbjct: 128 KKADHNALKRLIEADDGRDIDAVDSDGRTALLFVSGLGSEECVRVLAEAGADLDHRNNSG 187

Query: 169 GFTALHMAAGYVKPGTVELLVDLGADPEVEDNKGRTPLGLAKGILKATPK---VHFVRRV 228
           G TALHMAAGYVKPG  +LL++LGADPEV+D++GRTPL LAK ILK TPK   + F RR+
Sbjct: 188 GLTALHMAAGYVKPGVAKLLMELGADPEVQDDRGRTPLDLAKEILKVTPKGNPMQFARRL 247

Query: 229 GLERVIGAVEKVCFEYAEVERLLGRRGMGEDLEYLVKWKDGEDNEWVNVGLISAELVADF 288
           GLE VI A+E+V FEYAEV+ LL +RG G++LEYLVKWKDG+DN WV    I  +L+ D+
Sbjct: 248 GLESVIRALEEVVFEYAEVQELLEKRGKGDNLEYLVKWKDGDDNTWVKARFIGEDLIKDY 307

Query: 289 EAALEYAVAEAVVEKRLREWGR 308
           EA LEYAVAE V+ KRL + G+
Sbjct: 308 EAGLEYAVAEGVLGKRLGDDGK 329

The following BLAST results are available for this feature:

BLAST of CmaCh19G007690.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SR43C_ARATH	8.9e-82	52.98	Signal recognition particle 43 kDa protein, chloroplastic OS=Arabidopsis thalian...	[more]
SR43C_ORYSJ	7.6e-65	43.08	Probable signal recognition particle 43 kDa protein, chloroplastic OS=Oryza sati...	[more]
ANKH_ALLVD	1.7e-08	41.00	Ankyrin homolog OS=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 10...	[more]
ANR54_BOVIN	8.5e-08	32.70	Ankyrin repeat domain-containing protein 54 OS=Bos taurus GN=ANKRD54 PE=2 SV=1	[more]
ANR50_HUMAN	1.1e-07	28.65	Ankyrin repeat domain-containing protein 50 OS=Homo sapiens GN=ANKRD50 PE=1 SV=4	[more]

BLAST of CmaCh19G007690.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K634_CUCSA	8.5e-124	74.17	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G018780 PE=4 SV=1	[more]
B9RF69_RICCO	3.4e-96	59.27	Ankyrin repeat domain protein, putative OS=Ricinus communis GN=RCOM_1431980 PE=4...	[more]
V7ADE1_PHAVU	1.3e-95	59.27	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G025300g PE=4 SV=1	[more]
A0A0L9V8W8_PHAAN	1.7e-95	61.56	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g192600 PE=4 SV=1	[more]
A0A0S3SE85_PHAAN	1.7e-95	61.56	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G245100 PE=...	[more]

BLAST of CmaCh19G007690.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G47450.1	5.0e-83	52.98	chloroplast signal recognition particle component (CAO)	[more]
AT4G35450.5	8.2e-09	37.50	ankyrin repeat-containing protein 2	[more]
AT2G17390.1	3.1e-08	36.36	ankyrin repeat-containing 2B	[more]
AT5G66055.1	2.2e-06	36.25	ankyrin repeat protein	[more]
AT3G04710.1	4.9e-06	35.53	ankyrin repeat family protein	[more]

BLAST of CmaCh19G007690.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449472373\|ref\|XP_004153574.1\|	1.2e-123	74.17	PREDICTED: signal recognition particle 43 kDa protein, chloroplastic [Cucumis sa...	[more]
gi\|659094126\|ref\|XP_008447899.1\|	1.2e-123	74.75	PREDICTED: signal recognition particle 43 kDa protein, chloroplastic isoform X1 ...	[more]
gi\|659094128\|ref\|XP_008447900.1\|	1.2e-123	74.75	PREDICTED: signal recognition particle 43 kDa protein, chloroplastic isoform X2 ...	[more]
gi\|1009150816\|ref\|XP_015893225.1\|	2.2e-96	66.41	PREDICTED: signal recognition particle 43 kDa protein, chloroplastic-like [Zizip...	[more]
gi\|1009150731\|ref\|XP_015893177.1\|	3.7e-96	66.41	PREDICTED: signal recognition particle 43 kDa protein, chloroplastic-like isofor...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000953	Chromo/chromo_shadow_dom
IPR002110	Ankyrin_rpt
IPR016197	Chromo-like_dom_sf
IPR020683	Ankyrin_rpt-contain_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0009416	response to light stimulus
GO:0045038	protein import into chloroplast thylakoid membrane

Vocabulary: **Cellular Component**
Term	Definition
GO:0009507	chloroplast
GO:0080085	signal recognition particle, chloroplast targeting

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045038	protein import into chloroplast thylakoid membrane
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0071704	organic substance metabolic process
biological_process	GO:0044238	primary metabolic process
biological_process	GO:0009639	response to red or far red light
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0080085	signal recognition particle, chloroplast targeting
cellular_component	GO:0044434	chloroplast part
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh19G007690	CmaCh19G007690	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh19G007690.1	CmaCh19G007690.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh19G007690.1.exon.1	CmaCh19G007690.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh19G007690.1.CDS.1	CmaCh19G007690.1.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000953	Chromo/chromo shadow domain	SMART	SM00298	chromo_7	coord: 53..105 score: 0.24coord: 240..290 score: 1.
IPR000953	Chromo/chromo shadow domain	PROFILE	PS50013	CHROMO_2	coord: 242..307 score: 8
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 99..130 score: 2300.0coord: 168..197 score: 0.0037coord: 134..163 score:
IPR002110	Ankyrin repeat	PROFILE	PS50088	ANK_REPEAT	coord: 168..200 score: 11.22coord: 134..166 score: 9
IPR016197	Chromo domain-like	unknown	SSF54160	Chromo domain-like	coord: 240..287 score: 1.78E-10coord: 50..104 score: 1.3
IPR020683	Ankyrin repeat-containing domain	GENE3D	G3DSA:1.25.40.20		coord: 103..210 score: 1.3
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 107..199 score: 1.8
IPR020683	Ankyrin repeat-containing domain	PROFILE	PS50297	ANK_REP_REGION	coord: 125..209 score: 22
IPR020683	Ankyrin repeat-containing domain	unknown	SSF48403	Ankyrin repeat	coord: 99..210 score: 5.13
None	No IPR available	GENE3D	G3DSA:2.40.50.40		coord: 45..102 score: 6.3E-5coord: 243..288 score: 2.
None	No IPR available	PANTHER	PTHR24128	FAMILY NOT NAMED	coord: 8..304 score: 6.7E