CmaCh17G012350.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCAAATTGTTTATGGCTTTGCTTTTGGCTCTTGTGGCCACTCACGTCGTAGCTAGACCTGCGCCAACCCACGCCACTTTCAATGACCAAAAGAATCTCCTTGGTGGGGTTGGTGGCATCTCCGGCCTCCCGTTCGGTGGTGGTCTTGGTTTTCCCGGTGGAATCGGTGGTCTCGGTGGCCCTGGTGGTATTGGTGGTCTTGGCTTTCCTGGTGGCATTGGTGGTCTTGGCTTTCCTGGTGGCATTGGTGGTCTTGGCTTTCCTGGTGGCATTGGCGGTCTCGGTGGCCCTGGTGGGATCGGTGGTCTCGGTGGCCCTGGTGGAATTGGTGGACTAGGTGGAGTTGGTGGTGTTGGTGGCCATAGTGGAGTTGGGGGACTGGGAGGCACTGGAGGTGGCTTGGGTGGAGGTGGAAGCGGAGGTACCGGTGGTGTTGGTGGCGGTTCTGGTGGCCCTTATCCTTGA ATGGGCAAATTGTTTATGGCTTTGCTTTTGGCTCTTGTGGCCACTCACGTCGTAGCTAGACCTGCGCCAACCCACGCCACTTTCAATGACCAAAAGAATCTCCTTGGTGGGGTTGGTGGCATCTCCGGCCTCCCGTTCGGTGGTGGTCTTGGTTTTCCCGGTGGAATCGGTGGTCTCGGTGGCCCTGGTGGTATTGGTGGTCTTGGCTTTCCTGGTGGCATTGGTGGTCTTGGCTTTCCTGGTGGCATTGGTGGTCTTGGCTTTCCTGGTGGCATTGGCGGTCTCGGTGGCCCTGGTGGGATCGGTGGTCTCGGTGGCCCTGGTGGAATTGGTGGACTAGGTGGAGTTGGTGGTGTTGGTGGCCATAGTGGAGTTGGGGGACTGGGAGGCACTGGAGGTGGCTTGGGTGGAGGTGGAAGCGGAGGTACCGGTGGTGTTGGTGGCGGTTCTGGTGGCCCTTATCCTTGA ATGGGCAAATTGTTTATGGCTTTGCTTTTGGCTCTTGTGGCCACTCACGTCGTAGCTAGACCTGCGCCAACCCACGCCACTTTCAATGACCAAAAGAATCTCCTTGGTGGGGTTGGTGGCATCTCCGGCCTCCCGTTCGGTGGTGGTCTTGGTTTTCCCGGTGGAATCGGTGGTCTCGGTGGCCCTGGTGGTATTGGTGGTCTTGGCTTTCCTGGTGGCATTGGTGGTCTTGGCTTTCCTGGTGGCATTGGTGGTCTTGGCTTTCCTGGTGGCATTGGCGGTCTCGGTGGCCCTGGTGGGATCGGTGGTCTCGGTGGCCCTGGTGGAATTGGTGGACTAGGTGGAGTTGGTGGTGTTGGTGGCCATAGTGGAGTTGGGGGACTGGGAGGCACTGGAGGTGGCTTGGGTGGAGGTGGAAGCGGAGGTACCGGTGGTGTTGGTGGCGGTTCTGGTGGCCCTTATCCTTGA MGKLFMALLLALVATHVVARPAPTHATFNDQKNLLGGVGGISGLPFGGGLGFPGGIGGLGGPGGIGGLGFPGGIGGLGFPGGIGGLGFPGGIGGLGGPGGIGGLGGPGGIGGLGGVGGVGGHSGVGGLGGTGGGLGGGGSGGTGGVGGGSGGPYP
BLAST of CmaCh17G012350.1 vs. TrEMBL
Match: A5AU90_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031043 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 5.4e-10 Identity = 87/176 (49.43%), Postives = 101/176 (57.39%), Query Frame = 1
BLAST of CmaCh17G012350.1 vs. TrEMBL
Match: A0A0B4XLI8_9GAMM (Uncharacterized protein OS=Alcanivorax pacificus W11-5 GN=S7S_04965 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 7.1e-10 Identity = 73/117 (62.39%), Postives = 92/117 (78.63%), Query Frame = 1
BLAST of CmaCh17G012350.1 vs. TrEMBL
Match: F6HS53_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0051g00530 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.2e-09 Identity = 87/176 (49.43%), Postives = 100/176 (56.82%), Query Frame = 1
BLAST of CmaCh17G012350.1 vs. TrEMBL
Match: M1B6B1_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014690 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.7e-09 Identity = 94/154 (61.04%), Postives = 109/154 (70.78%), Query Frame = 1
BLAST of CmaCh17G012350.1 vs. TrEMBL
Match: A0A0M3TUY8_9BURK (Cell division protein FtsK OS=Burkholderia sp. HB1 GN=AC233_04615 PE=3 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 3.5e-09 Identity = 67/103 (65.05%), Postives = 85/103 (82.52%), Query Frame = 1
BLAST of CmaCh17G012350.1 vs. TAIR10
Match: AT4G29020.1 (AT4G29020.1 glycine-rich protein) HSP 1 Score: 47.4 bits (111), Expect = 9.5e-06 Identity = 70/147 (47.62%), Postives = 89/147 (60.54%), Query Frame = 1
BLAST of CmaCh17G012350.1 vs. NCBI nr
Match: gi|147766421|emb|CAN73804.1| (hypothetical protein VITISV_031043 [Vitis vinifera]) HSP 1 Score: 72.4 bits (176), Expect = 7.8e-10 Identity = 87/176 (49.43%), Postives = 101/176 (57.39%), Query Frame = 1
BLAST of CmaCh17G012350.1 vs. NCBI nr
Match: gi|917755154|ref|WP_052269207.1| (hypothetical protein [Alcanivorax pacificus]) HSP 1 Score: 72.0 bits (175), Expect = 1.0e-09 Identity = 73/117 (62.39%), Postives = 92/117 (78.63%), Query Frame = 1
BLAST of CmaCh17G012350.1 vs. NCBI nr
Match: gi|645259790|ref|XP_008235531.1| (PREDICTED: glycine-rich cell wall structural protein [Prunus mume]) HSP 1 Score: 72.0 bits (175), Expect = 1.0e-09 Identity = 98/166 (59.04%), Postives = 108/166 (65.06%), Query Frame = 1
BLAST of CmaCh17G012350.1 vs. NCBI nr
Match: gi|745804712|gb|AJD47413.1| (hypothetical protein S7S_04965 [Alcanivorax pacificus W11-5]) HSP 1 Score: 72.0 bits (175), Expect = 1.0e-09 Identity = 73/117 (62.39%), Postives = 92/117 (78.63%), Query Frame = 1
BLAST of CmaCh17G012350.1 vs. NCBI nr
Match: gi|731390143|ref|XP_010650249.1| (PREDICTED: glycine-rich cell wall structural protein [Vitis vinifera]) HSP 1 Score: 71.2 bits (173), Expect = 1.7e-09 Identity = 87/176 (49.43%), Postives = 100/176 (56.82%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
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