CmaCh17G012280.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGCTTTTGTTGGGGCTCAGGTTCCGGGAATTATATATCAACCGAAACCTTCAAGGTATTACGTTCATGTTGCTAATGGTCTAAGCACGCTTCCGTTGACAGTGCATTGTCAGTCCAAAGACGATGATTTGGGGATTCACCATTTGCCTAATCGTGGAGATGATTTCCAATGGAACTTTAAGGTAAATTTTTGGGGAACAACCCTCTTTTGGTGCAGATTAGAGAGGCCGGATGCATATGTCACTTTTGAAACTTTTTGGCCTGAGTCGAAGAACACATGGCTTCGTGATAGGTGCAGAAATGGAACTCAAGGAACTTGCTTATGGATAGCTAAAGATGATGGAATTTACTTGTTTAACTTTCCTGCTAATAATGACGAGTTGATTCACAAATGGATCTTTTAG ATGGTGGCTTTTGTTGGGGCTCAGGTTCCGGGAATTATATATCAACCGAAACCTTCAAGGTATTACGTTCATGTTGCTAATGGTCTAAGCACGCTTCCGTTGACAGTGCATTGTCAGTCCAAAGACGATGATTTGGGGATTCACCATTTGCCTAATCGTGGAGATGATTTCCAATGGAACTTTAAGGTAAATTTTTGGGGAACAACCCTCTTTTGGTGCAGATTAGAGAGGCCGGATGCATATGTCACTTTTGAAACTTTTTGGCCTGAGTCGAAGAACACATGGCTTCGTGATAGGTGCAGAAATGGAACTCAAGGAACTTGCTTATGGATAGCTAAAGATGATGGAATTTACTTGTTTAACTTTCCTGCTAATAATGACGAGTTGATTCACAAATGGATCTTTTAG ATGGTGGCTTTTGTTGGGGCTCAGGTTCCGGGAATTATATATCAACCGAAACCTTCAAGGTATTACGTTCATGTTGCTAATGGTCTAAGCACGCTTCCGTTGACAGTGCATTGTCAGTCCAAAGACGATGATTTGGGGATTCACCATTTGCCTAATCGTGGAGATGATTTCCAATGGAACTTTAAGGTAAATTTTTGGGGAACAACCCTCTTTTGGTGCAGATTAGAGAGGCCGGATGCATATGTCACTTTTGAAACTTTTTGGCCTGAGTCGAAGAACACATGGCTTCGTGATAGGTGCAGAAATGGAACTCAAGGAACTTGCTTATGGATAGCTAAAGATGATGGAATTTACTTGTTTAACTTTCCTGCTAATAATGACGAGTTGATTCACAAATGGATCTTTTAG MVAFVGAQVPGIIYQPKPSRYYVHVANGLSTLPLTVHCQSKDDDLGIHHLPNRGDDFQWNFKVNFWGTTLFWCRLERPDAYVTFETFWPESKNTWLRDRCRNGTQGTCLWIAKDDGIYLFNFPANNDELIHKWIF
BLAST of CmaCh17G012280.1 vs. TrEMBL
Match: A0A0A0K6N8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G336430 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 3.6e-26 Identity = 62/137 (45.26%), Postives = 78/137 (56.93%), Query Frame = 1
BLAST of CmaCh17G012280.1 vs. TrEMBL
Match: M5VWE5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.4e-25 Identity = 57/125 (45.60%), Postives = 75/125 (60.00%), Query Frame = 1
BLAST of CmaCh17G012280.1 vs. TrEMBL
Match: A0A0A0KA40_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G007430 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 9.8e-24 Identity = 50/121 (41.32%), Postives = 68/121 (56.20%), Query Frame = 1
BLAST of CmaCh17G012280.1 vs. TrEMBL
Match: B9IIH9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s06720g PE=4 SV=2) HSP 1 Score: 117.9 bits (294), Expect = 9.8e-24 Identity = 57/122 (46.72%), Postives = 77/122 (63.11%), Query Frame = 1
BLAST of CmaCh17G012280.1 vs. TrEMBL
Match: B9S575_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1722060 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 1.7e-23 Identity = 64/139 (46.04%), Postives = 81/139 (58.27%), Query Frame = 1
BLAST of CmaCh17G012280.1 vs. TAIR10
Match: AT4G29035.1 (AT4G29035.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 94.4 bits (233), Expect = 5.9e-20 Identity = 50/122 (40.98%), Postives = 68/122 (55.74%), Query Frame = 1
BLAST of CmaCh17G012280.1 vs. TAIR10
Match: AT4G16295.1 (AT4G16295.1 S-protein homologue 1) HSP 1 Score: 92.8 bits (229), Expect = 1.7e-19 Identity = 50/130 (38.46%), Postives = 68/130 (52.31%), Query Frame = 1
BLAST of CmaCh17G012280.1 vs. TAIR10
Match: AT5G04350.1 (AT5G04350.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 66.6 bits (161), Expect = 1.3e-11 Identity = 33/91 (36.26%), Postives = 51/91 (56.04%), Query Frame = 1
BLAST of CmaCh17G012280.1 vs. TAIR10
Match: AT5G04347.1 (AT5G04347.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 65.9 bits (159), Expect = 2.2e-11 Identity = 41/112 (36.61%), Postives = 55/112 (49.11%), Query Frame = 1
BLAST of CmaCh17G012280.1 vs. TAIR10
Match: AT3G26880.1 (AT3G26880.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 64.7 bits (156), Expect = 5.0e-11 Identity = 31/86 (36.05%), Postives = 49/86 (56.98%), Query Frame = 1
BLAST of CmaCh17G012280.1 vs. NCBI nr
Match: gi|659124355|ref|XP_008462115.1| (PREDICTED: uncharacterized protein LOC103500543 [Cucumis melo]) HSP 1 Score: 215.7 bits (548), Expect = 5.0e-53 Identity = 89/119 (74.79%), Postives = 99/119 (83.19%), Query Frame = 1
BLAST of CmaCh17G012280.1 vs. NCBI nr
Match: gi|659116532|ref|XP_008458117.1| (PREDICTED: uncharacterized protein LOC103497646 [Cucumis melo]) HSP 1 Score: 211.1 bits (536), Expect = 1.2e-51 Identity = 92/135 (68.15%), Postives = 107/135 (79.26%), Query Frame = 1
BLAST of CmaCh17G012280.1 vs. NCBI nr
Match: gi|659124347|ref|XP_008462110.1| (PREDICTED: uncharacterized protein LOC103500539 [Cucumis melo]) HSP 1 Score: 207.2 bits (526), Expect = 1.8e-50 Identity = 89/119 (74.79%), Postives = 98/119 (82.35%), Query Frame = 1
BLAST of CmaCh17G012280.1 vs. NCBI nr
Match: gi|449443925|ref|XP_004139726.1| (PREDICTED: uncharacterized protein LOC101206205 [Cucumis sativus]) HSP 1 Score: 204.5 bits (519), Expect = 1.1e-49 Identity = 91/135 (67.41%), Postives = 106/135 (78.52%), Query Frame = 1
BLAST of CmaCh17G012280.1 vs. NCBI nr
Match: gi|449443935|ref|XP_004139731.1| (PREDICTED: uncharacterized protein LOC101207655 [Cucumis sativus]) HSP 1 Score: 203.8 bits (517), Expect = 2.0e-49 Identity = 85/119 (71.43%), Postives = 95/119 (79.83%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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